Metagenome Family F041858

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F041858
Family Type	Metagenome
Number of Sequences	159
Average Sequence Length	59 residues
Representative Sequence	MAETFKCPHCGAVYEIRYDKAVSEDNRLAHCEVCGKQMDARNGSDIRHYELVKMPDGTNV
Number of Associated Samples	104
Number of Associated Scaffolds	159

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	67.92 %
% of genes near scaffold ends (potentially truncated)	40.88 %
% of genes from short scaffolds (< 2000 bps)	89.94 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (66.038 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.094 % of family members)
Environment Ontology (ENVO)	Unclassified (30.189 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.491 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 25.00% Coil/Unstructured: 75.00%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 159 Family Scaffolds
PF03401	TctC	5.03
PF13719	zinc_ribbon_5	1.89
PF08530	PepX_C	1.89
PF13458	Peripla_BP_6	1.26
PF04392	ABC_sub_bind	1.26
PF14255	Cys_rich_CPXG	1.26
PF08857	ParBc_2	1.26
PF12681	Glyoxalase_2	1.26
PF08352	oligo_HPY	1.26
PF13365	Trypsin_2	1.26
PF08238	Sel1	0.63
PF00891	Methyltransf_2	0.63
PF13717	zinc_ribbon_4	0.63
PF06055	ExoD	0.63
PF00534	Glycos_transf_1	0.63
PF00903	Glyoxalase	0.63
PF02922	CBM_48	0.63
PF02615	Ldh_2	0.63
PF11319	VasI	0.63
PF01936	NYN	0.63
PF00239	Resolvase	0.63
PF05129	Elf1	0.63
PF13751	DDE_Tnp_1_6	0.63
PF07883	Cupin_2	0.63
PF00857	Isochorismatase	0.63
PF00216	Bac_DNA_binding	0.63

COG ID	Name	Functional Category	% Frequency in 159 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	5.03
COG2936	Predicted acyl esterase	General function prediction only [R]	1.89
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.26
COG4318	Uncharacterized conserved protein	Function unknown [S]	1.26
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.63
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.63
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	0.63
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.63
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.63
COG2055	Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family	Energy production and conversion [C]	0.63
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.63
COG3932	Exopolysaccharide synthesis protein ExoD	Cell wall/membrane/envelope biogenesis [M]	0.63
COG4888	Transcription elongation factor Elf1, contains Zn-ribbon domain	Transcription [K]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.04 %
Unclassified	root	N/A	33.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.04 %
Unclassified	root	N/A	33.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.04 %
Unclassified	root	N/A	33.96 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	55.35 %
Unclassified	root	N/A	33.96 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.89 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	46.54 %
Unclassified	root	N/A	33.96 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.96 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	20.13 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	13.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.89 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.63 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.21 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.89 %
Yersiniaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae	0.63 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.63 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.63 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.21 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.89 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.63 %
Serratia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia	0.63 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.63 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.63 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.21 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.89 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.63 %
Serratia nematodiphila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia → Serratia nematodiphila	0.63 %
unclassified Microvirga	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga	0.63 %
Afipia carboxidovorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia carboxidovorans	0.63 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.63 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.21 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.89 %
Serratia nematodiphila DZ0503SBS1	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia → Serratia nematodiphila → Serratia nematodiphila DZ0503SBS1	0.63 %
Bradyrhizobium sp. th.b2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	0.63 %
Microvirga sp. VF16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga → Microvirga sp. VF16	0.63 %
Afipia carboxidovorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia carboxidovorans	0.63 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.63 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.63 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000156\|NODE_c0363132	Not Available	691	Open in IMG/M
3300000156\|NODE_c0524941	All Organisms → cellular organisms → Bacteria → Proteobacteria	1127	Open in IMG/M
3300000579\|AP72_2010_repI_A01DRAFT_1047130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	626	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10045842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1146	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10089148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	767	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10106362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	689	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10110342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	675	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1022119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1194	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1029690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1011	Open in IMG/M
3300000787\|JGI11643J11755_11791005	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10091540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	644	Open in IMG/M
3300000956\|JGI10216J12902_100873672	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300000956\|JGI10216J12902_103318567	Not Available	1842	Open in IMG/M
3300000956\|JGI10216J12902_105342358	All Organisms → cellular organisms → Bacteria → Proteobacteria	1171	Open in IMG/M
3300001661\|JGI12053J15887_10184170	All Organisms → cellular organisms → Bacteria → Proteobacteria	1073	Open in IMG/M
3300002911\|JGI25390J43892_10161608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300004281\|Ga0066397_10138989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	546	Open in IMG/M
3300004479\|Ga0062595_101034433	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300005167\|Ga0066672_10526632	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300005295\|Ga0065707_10273041	Not Available	1066	Open in IMG/M
3300005332\|Ga0066388_100440618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1945	Open in IMG/M
3300005332\|Ga0066388_101632897	All Organisms → cellular organisms → Bacteria → Proteobacteria	1136	Open in IMG/M
3300005332\|Ga0066388_102640344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	915	Open in IMG/M
3300005332\|Ga0066388_106950513	Not Available	569	Open in IMG/M
3300005467\|Ga0070706_101305147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	665	Open in IMG/M
3300005553\|Ga0066695_10676569	All Organisms → cellular organisms → Bacteria → Proteobacteria	608	Open in IMG/M
3300005560\|Ga0066670_10279578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1014	Open in IMG/M
3300005713\|Ga0066905_100858263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	791	Open in IMG/M
3300005764\|Ga0066903_100629864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1868	Open in IMG/M
3300005764\|Ga0066903_100829361	All Organisms → cellular organisms → Bacteria	1659	Open in IMG/M
3300005764\|Ga0066903_101517187	All Organisms → cellular organisms → Bacteria → Proteobacteria	1266	Open in IMG/M
3300005764\|Ga0066903_102593696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	982	Open in IMG/M
3300005764\|Ga0066903_102799195	All Organisms → cellular organisms → Bacteria → Proteobacteria	946	Open in IMG/M
3300005764\|Ga0066903_103179165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	888	Open in IMG/M
3300005764\|Ga0066903_105245590	Not Available	685	Open in IMG/M
3300005764\|Ga0066903_105950681	Not Available	639	Open in IMG/M
3300005764\|Ga0066903_107724057	Not Available	553	Open in IMG/M
3300005937\|Ga0081455_10000151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	83439	Open in IMG/M
3300005937\|Ga0081455_10538887	Not Available	775	Open in IMG/M
3300006049\|Ga0075417_10142833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1110	Open in IMG/M
3300006194\|Ga0075427_10074933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	606	Open in IMG/M
3300006791\|Ga0066653_10090052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1374	Open in IMG/M
3300006804\|Ga0079221_10878756	Not Available	655	Open in IMG/M
3300006844\|Ga0075428_100619796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1155	Open in IMG/M
3300006844\|Ga0075428_101009904	Not Available	880	Open in IMG/M
3300006845\|Ga0075421_102738912	Not Available	509	Open in IMG/M
3300006853\|Ga0075420_100297464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1400	Open in IMG/M
3300006854\|Ga0075425_101524079	Not Available	755	Open in IMG/M
3300006904\|Ga0075424_100134460	All Organisms → cellular organisms → Bacteria → Proteobacteria	2616	Open in IMG/M
3300007076\|Ga0075435_100150930	All Organisms → cellular organisms → Bacteria	1953	Open in IMG/M
3300009012\|Ga0066710_100205983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2805	Open in IMG/M
3300009147\|Ga0114129_10531142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1532	Open in IMG/M
3300009147\|Ga0114129_11173096	Not Available	958	Open in IMG/M
3300009792\|Ga0126374_10128616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia → Serratia nematodiphila → Serratia nematodiphila DZ0503SBS1	1496	Open in IMG/M
3300010043\|Ga0126380_10073859	All Organisms → cellular organisms → Bacteria	1946	Open in IMG/M
3300010043\|Ga0126380_10760840	Not Available	787	Open in IMG/M
3300010046\|Ga0126384_10311699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1298	Open in IMG/M
3300010046\|Ga0126384_11120319	Not Available	722	Open in IMG/M
3300010046\|Ga0126384_11196943	Not Available	701	Open in IMG/M
3300010047\|Ga0126382_11517841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	617	Open in IMG/M
3300010048\|Ga0126373_13064943	Not Available	521	Open in IMG/M
3300010358\|Ga0126370_10344376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1202	Open in IMG/M
3300010358\|Ga0126370_10844745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	821	Open in IMG/M
3300010358\|Ga0126370_11864237	Not Available	584	Open in IMG/M
3300010361\|Ga0126378_11263382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	834	Open in IMG/M
3300010366\|Ga0126379_11116806	Not Available	894	Open in IMG/M
3300010366\|Ga0126379_11776790	Not Available	721	Open in IMG/M
3300010398\|Ga0126383_10154076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2148	Open in IMG/M
3300010398\|Ga0126383_11025071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	914	Open in IMG/M
3300010398\|Ga0126383_12931921	Not Available	557	Open in IMG/M
3300012022\|Ga0120191_10002785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1682	Open in IMG/M
3300012199\|Ga0137383_10072256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2486	Open in IMG/M
3300012201\|Ga0137365_10115251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2021	Open in IMG/M
3300012201\|Ga0137365_10674268	Not Available	756	Open in IMG/M
3300012204\|Ga0137374_10030677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5884	Open in IMG/M
3300012204\|Ga0137374_11287309	Not Available	505	Open in IMG/M
3300012205\|Ga0137362_10112058	Not Available	2307	Open in IMG/M
3300012205\|Ga0137362_10397821	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1193	Open in IMG/M
3300012207\|Ga0137381_10281615	All Organisms → cellular organisms → Bacteria	1447	Open in IMG/M
3300012208\|Ga0137376_10750052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	841	Open in IMG/M
3300012210\|Ga0137378_10010830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	7912	Open in IMG/M
3300012285\|Ga0137370_10867488	Not Available	559	Open in IMG/M
3300012350\|Ga0137372_10970471	Not Available	596	Open in IMG/M
3300012354\|Ga0137366_10737658	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300012356\|Ga0137371_10267965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1332	Open in IMG/M
3300012358\|Ga0137368_10387568	Not Available	920	Open in IMG/M
3300012362\|Ga0137361_11732560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	544	Open in IMG/M
3300012582\|Ga0137358_10332712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1029	Open in IMG/M
3300012917\|Ga0137395_10801778	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300012948\|Ga0126375_10207740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1291	Open in IMG/M
3300012971\|Ga0126369_10691764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1096	Open in IMG/M
3300012971\|Ga0126369_11013512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	918	Open in IMG/M
3300012971\|Ga0126369_12593765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	592	Open in IMG/M
3300012971\|Ga0126369_13449225	Not Available	518	Open in IMG/M
3300016319\|Ga0182033_10570703	Not Available	980	Open in IMG/M
3300016341\|Ga0182035_10170071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia carboxidovorans	1695	Open in IMG/M
3300016341\|Ga0182035_11753541	Not Available	562	Open in IMG/M
3300016357\|Ga0182032_11664837	Not Available	556	Open in IMG/M
3300016387\|Ga0182040_11594346	Not Available	556	Open in IMG/M
3300016387\|Ga0182040_11963669	All Organisms → cellular organisms → Bacteria → Proteobacteria	502	Open in IMG/M
3300016404\|Ga0182037_11357979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	628	Open in IMG/M
3300016422\|Ga0182039_10820362	Not Available	827	Open in IMG/M
3300016422\|Ga0182039_12214547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	507	Open in IMG/M
3300016445\|Ga0182038_10394899	Not Available	1158	Open in IMG/M
3300016445\|Ga0182038_11796581	Not Available	553	Open in IMG/M
3300018433\|Ga0066667_10391198	All Organisms → cellular organisms → Bacteria → Proteobacteria	1120	Open in IMG/M
3300018468\|Ga0066662_11506818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	700	Open in IMG/M
3300018482\|Ga0066669_10430992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1126	Open in IMG/M
3300021560\|Ga0126371_10768670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1110	Open in IMG/M
3300021560\|Ga0126371_10925727	Not Available	1015	Open in IMG/M
3300025922\|Ga0207646_10672815	Not Available	927	Open in IMG/M
3300026277\|Ga0209350_1117801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	605	Open in IMG/M
3300026317\|Ga0209154_1261982	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300027646\|Ga0209466_1049279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	852	Open in IMG/M
3300027873\|Ga0209814_10011113	All Organisms → cellular organisms → Bacteria	3542	Open in IMG/M
3300027873\|Ga0209814_10094363	Not Available	1267	Open in IMG/M
3300027873\|Ga0209814_10307507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	691	Open in IMG/M
3300027873\|Ga0209814_10561857	Not Available	508	Open in IMG/M
3300027907\|Ga0207428_10984378	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300027909\|Ga0209382_10014391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9717	Open in IMG/M
3300028720\|Ga0307317_10194694	All Organisms → cellular organisms → Bacteria → Proteobacteria	684	Open in IMG/M
3300028791\|Ga0307290_10317985	Not Available	570	Open in IMG/M
3300028878\|Ga0307278_10508106	Not Available	526	Open in IMG/M
3300031543\|Ga0318516_10680691	Not Available	584	Open in IMG/M
3300031545\|Ga0318541_10186962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1144	Open in IMG/M
3300031564\|Ga0318573_10386958	Not Available	751	Open in IMG/M
3300031572\|Ga0318515_10262529	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300031679\|Ga0318561_10318163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	852	Open in IMG/M
3300031679\|Ga0318561_10330067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	835	Open in IMG/M
3300031680\|Ga0318574_10018875	Not Available	3323	Open in IMG/M
3300031681\|Ga0318572_10206226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1149	Open in IMG/M
3300031681\|Ga0318572_10808008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	557	Open in IMG/M
3300031724\|Ga0318500_10602244	Not Available	557	Open in IMG/M
3300031736\|Ga0318501_10181920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1094	Open in IMG/M
3300031771\|Ga0318546_10338741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1045	Open in IMG/M
3300031781\|Ga0318547_10324365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	938	Open in IMG/M
3300031890\|Ga0306925_10714592	Not Available	1047	Open in IMG/M
3300031890\|Ga0306925_11200181	Not Available	760	Open in IMG/M
3300031912\|Ga0306921_11707707	Not Available	680	Open in IMG/M
3300031912\|Ga0306921_11794535	Not Available	660	Open in IMG/M
3300031942\|Ga0310916_10200190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1671	Open in IMG/M
3300031942\|Ga0310916_10544787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	987	Open in IMG/M
3300031942\|Ga0310916_11633666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga → Microvirga sp. VF16	522	Open in IMG/M
3300031945\|Ga0310913_10574022	Not Available	800	Open in IMG/M
3300031946\|Ga0310910_11177586	All Organisms → cellular organisms → Bacteria → Proteobacteria	595	Open in IMG/M
3300031947\|Ga0310909_10547780	Not Available	968	Open in IMG/M
3300031947\|Ga0310909_10737264	Not Available	817	Open in IMG/M
3300031947\|Ga0310909_11332510	Not Available	576	Open in IMG/M
3300031954\|Ga0306926_10145433	All Organisms → cellular organisms → Bacteria	2933	Open in IMG/M
3300031954\|Ga0306926_11184837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	898	Open in IMG/M
3300032001\|Ga0306922_10080674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3415	Open in IMG/M
3300032001\|Ga0306922_10545127	All Organisms → cellular organisms → Bacteria → Proteobacteria	1233	Open in IMG/M
3300032035\|Ga0310911_10346561	Not Available	857	Open in IMG/M
3300032041\|Ga0318549_10118283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1166	Open in IMG/M
3300032076\|Ga0306924_10729605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1110	Open in IMG/M
3300032076\|Ga0306924_11104468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	864	Open in IMG/M
3300032261\|Ga0306920_100078818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4842	Open in IMG/M
3300032261\|Ga0306920_100230701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2762	Open in IMG/M
3300033289\|Ga0310914_11157073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	675	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.79%
Host-Associated	Host-Associated	11.95%
Engineered	Engineered	1.26%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.79%
Plants	Host-Associated → Plants	11.95%
Solid Waste	Engineered → Solid Waste	1.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.26%
Grass	Engineered → Solid Waste → Grass	1.26%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.84%
Loam	Environmental → Terrestrial → Soil → Loam	11.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.69%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.26%
Composting	Engineered → Solid Waste → Grass → Composting	1.26%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	34.59%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.43%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.26%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	1.26%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.47%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.32%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.66%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.03%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.26%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.26%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	1.26%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.63%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.63%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
NODE_03631322	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MAETFKCPHCGAVYEIRYEKAVSEDNRLAHCEVCGKQMDARNGSDIRHYELVKMPDGTNV
NODE_05249413	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MPALWRSLYEVTYEKTISGDKGMANCQVCGKQMESRNGESIPHYELVKMPDGTNI*
AP72_2010_repI_A01DRAFT_10471303	3300000579	Forest Soil	IFEMAETFKCPHCGAVYEIRHDKAVSEDNRLAHCEVCGKQMDARTGSDIRHYELVKMPDGTNV*
AF_2010_repII_A1DRAFT_100458422	3300000597	Forest Soil	MAETFKCPRCGAVYQVTYDKAMSKDNRLAHCEVCGKQMDARNGSTIRHYELVKMPDGTNV
AF_2010_repII_A1DRAFT_100891481	3300000597	Forest Soil	ALYEITYEKIASDDKHSADCQVCGKQMDSTNGSRIPSYELVKMPDGTNV*
AF_2010_repII_A1DRAFT_101063623	3300000597	Forest Soil	LYEITYEKTDADDNHAADCQVCGKRMDSSNSSNIPCYELVKMPDGTSV*
AF_2010_repII_A1DRAFT_101103422	3300000597	Forest Soil	MAETFRCPHCRALYEIRYDKGVTDDNHLAHCQVCGKQMDARNGSSIRHYELVKMPDGTNV
AF_2010_repII_A100DRAFT_10221192	3300000655	Forest Soil	MAETFKCPHCGAGYEIGYDKAVSEDNRLAHCEVCGKQMDARNGSDIRHYELVKMPDGTNV
AF_2010_repII_A100DRAFT_10296903	3300000655	Forest Soil	LYEITYEKIASDDKHSADCQVCGKQMDSTNGSSIPCYELVKMPDGTNV*
JGI11643J11755_117910052	3300000787	Soil	MAKTFKCPHCGALYEIITDEKTVSEDKDAADCRVCGKRMDVTKGSSILRYELVKMPDGTNV*
AF_2010_repII_A001DRAFT_100915402	3300000793	Forest Soil	MAETFRCPHCRALYEIRYDKGVTDDNRLAHCQVCGKQMDARNGSSIRHYELVKMPDGTNV
JGI10216J12902_1008736723	3300000956	Soil	MSKTFKCPHCGALYEIITDEKTVSEDKDAADCRVCGKRMDVTKGSSILRYELVKMPDGTNV*
JGI10216J12902_1033185674	3300000956	Soil	MAETFKCPHCGALYEIIADEKTVSNDKDAADCRVCGKQMDVSKGSSILRYELVKMPDGTNV*
JGI10216J12902_1053423583	3300000956	Soil	MAETFKCPQCGAAYQVTYDKAMFKDNRPAHCEVCGKQMDARKSSTLRHYELVKMPDGTNV
JGI12053J15887_101841702	3300001661	Forest Soil	MMVPRFANTRRRCRLEAETYPAYICRMPETFKCPDCGALYKIIVEKTISRDKNAADCLVCGKQMDSGNGSIIPHYELVKMPDGTDV*
JGI25390J43892_101616082	3300002911	Grasslands Soil	MAETFKCPHCGALYEIIAHERTVSDDKDVADCQVCGKRINATSGSRILRYELVRM
Ga0066397_101389892	3300004281	Tropical Forest Soil	TFRCPHCRALYEISYDKGVTDDNRLAHCQVCGKQMDARNGSSIRHYELVKMPDGTNV*
Ga0062595_1010344331	3300004479	Soil	TWSGYVHAMAKTFKCPHCGALYEIITDEKTVSEDKDAADCRVCGKRMDVTKGSSILRYELVKMPDGTNV*
Ga0066672_105266323	3300005167	Soil	MAETFKCPHCGALYEIIAHERTVSDDKDVADCQVCGKRINATSGSRILRYELVRMPDGTNV*
Ga0065707_102730411	3300005295	Switchgrass Rhizosphere	MAETFKCPHCGALYEIISDEKIVSEYTGAADCRLCGKQMDVTKGSNLRYELVQMPDGTNV
Ga0066388_1004406181	3300005332	Tropical Forest Soil	PHCRALYEIRYDKGVTDDNRLAHCQVCGKQMDARNGSSIRYYELVKMPDGTNV*
Ga0066388_1016328973	3300005332	Tropical Forest Soil	MYIFQMTETFKCPQCGALYEIRHDKAVSDDNPPGDCQICGKQMDARNGSSIWCYELIRMPDGTNV*
Ga0066388_1026403443	3300005332	Tropical Forest Soil	AVYEIRYDKAVSEDNRLAHCEVCGKQMDARTGSDIRHYELVKMPDGTNV*
Ga0066388_1069505131	3300005332	Tropical Forest Soil	MAETFRCPHCRALYEIGYDKGVTDDNRLAYCQVCGKQMDARNGSSIRHYELVKMPDS
Ga0070706_1013051471	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAETFKCPHCGAVYEIRYDKAVSEDNRLAHCEVCGKQMDARNGSDIRHYELVKMPDGTNV
Ga0066695_106765691	3300005553	Soil	MAETFKCPHCGALYEITCEKTVSHDKGSPHCQVCGKQMNSRNGSIIRRYELVKMPDGTNV
Ga0066670_102795781	3300005560	Soil	MSETFKCPCGALYEVTHEKTISRDKQAAACQVCGKQMDSRNGLSIPHYELVKMPDGTNV*
Ga0066905_1008582632	3300005713	Tropical Forest Soil	MAEPFKCPHCGALYEIIRYEKAVPHDKDAADCQVCGKQMDLTNGSSIPHYELVKMPDGTNV*
Ga0066903_1006298644	3300005764	Tropical Forest Soil	MAETFKCPHCGAVYEIRHDKAVSEDNRLAHCEVCGKQMDARTRSDIRHYELVRMPDGTNV
Ga0066903_1008293612	3300005764	Tropical Forest Soil	MYIFQMTETFKCPQCGALYEIRHDKAVSDDNPPADCQICGKQMDARNGSSIRCHELIKMPDGTNV*
Ga0066903_1015171873	3300005764	Tropical Forest Soil	MAETFKCSRCGAVYQVTYDKAMSKDNRLAHCEVCGKQMDARNGSTIQHYELVKMPDGTNV
Ga0066903_1025936961	3300005764	Tropical Forest Soil	MAETFKCPRCGAVYQVTYDKVMSKDNRLAHCEVCGKQMDARNGSTIRHYELVKMPDG
Ga0066903_1027991952	3300005764	Tropical Forest Soil	MAETFKCPHCRAVYEIRHHKAVSEDNRLAHCEVCGKQMDARNGSDIRYYELVKMPDGTNV
Ga0066903_1031791652	3300005764	Tropical Forest Soil	MAETLKCPHCGALYEIIRYEKAVPHDKDAADCQVCGKLMDLTNGSSIPHYELVKMPDGTNV*
Ga0066903_1052455902	3300005764	Tropical Forest Soil	MAETFKCPHCGAVYEIRHDQAVSEDNRLAHCEVCGKHMDARTGSDIRHYELVKMPDGTNV
Ga0066903_1059506812	3300005764	Tropical Forest Soil	VIHARRANVIFEMGETCRCPHCRALYEIRYDKGVTDDNRLAHFQVCGKQMDARNGSSIRYYEPVKMPDGTNV
Ga0066903_1077240571	3300005764	Tropical Forest Soil	MAETFKCPHCGAVYEIRHDKAVSEDNRLAHCEVCGKQMDARNGSDIRHYELVKMPDGT
Ga0081455_1000015171	3300005937	Tabebuia Heterophylla Rhizosphere	MADTFKCPHCGALYEVIAHERTVSDDKDVADCQVCGKRMHATEGSRILHYELVRMPDGTNV*
Ga0081455_105388872	3300005937	Tabebuia Heterophylla Rhizosphere	SLEAETWSRYIYPMAETFKCPHCGALYEIITDDKTVSEDKDAADCRVCGKQMDVTKGSSILRYELVKMPDGTNV*
Ga0075417_101428333	3300006049	Populus Rhizosphere	MTETFKCPHCGALYEIIAHEKTVSDDKNAAECKVCGKRMSMTNGSRILNYELVRMPDGTNV*
Ga0075427_100749333	3300006194	Populus Rhizosphere	MTETFKCPHCGALYEIIAHEKTVSDDKNAAECKVCGKRMSVTNGSRILNYELVRMPDGTNV*
Ga0066653_100900521	3300006791	Soil	MAETFKCPHCGALYEIIAHERTVSDDKDAADCQVCGKRMDATNGSRILRYELVRMPDGTNV*
Ga0079221_108787562	3300006804	Agricultural Soil	MAETFKCPHCGAVYEIRYDKAVSEGNRLAYCEVCGKQMDSSNGSGIPHYELVKMPDGTNV
Ga0075428_1006197963	3300006844	Populus Rhizosphere	MTETFKCPHCGALYEIIAHEKTVSDDKNAAECKVCGKRMSVTNGPRILNYELVRMPDGTNV*
Ga0075428_1010099042	3300006844	Populus Rhizosphere	MAETFKCPHCGALYEIISDEKIVSEDTGAAYCRLCGKQMDVTKGSNLRYELVQMPDGTNV
Ga0075421_1027389122	3300006845	Populus Rhizosphere	MAKTFKCPHCGALYEIITDEKTVSEDKDAADCRVCGKQMDVTKGSSILSYELVKMPDGTNV*
Ga0075420_1002974643	3300006853	Populus Rhizosphere	MTETFKCPHCGALYEIIAHEKTVSDDKNAAECKVCGKRMSMTNGSRILNYELVRMPDGTN
Ga0075425_1015240791	3300006854	Populus Rhizosphere	HPMAETFKCPHCGALYEIITDEKTVSEDKDAADCRVCGKQMDVTKGSSILSYELVKMPDGTNV*
Ga0075424_1001344602	3300006904	Populus Rhizosphere	MAETFKCPHCGALYEIITDEKTVSEDKDAADCRVCGKQMDVTKGSSILSYELVKMPDGTNV*
Ga0075435_1001509304	3300007076	Populus Rhizosphere	MAETFKCPHCGALYEIITDEKTVSEDKDAADCRVCGKRMDVTKGSSILRYELVKMPDGTNV*
Ga0066710_1002059832	3300009012	Grasslands Soil	MAETFKCPHCGALYEIIAHERTVSDDKDVADCQVCGKRINATSGSRILRYELVRMPDGTN
Ga0114129_105311422	3300009147	Populus Rhizosphere	MAETFKCPHCGALYEIVTYERTVSDNKDAANCQVCGKRMGSADGSSIRHYELVKMPDGTNV*
Ga0114129_111730962	3300009147	Populus Rhizosphere	MAESFKCPHCGALYEIIADEKTVSNDKDAADCRVCGKQMDVSKGSSILRYELVKMPDGTNV*
Ga0126374_101286162	3300009792	Tropical Forest Soil	MDETFKCPYCGALYEITYEKIASDDTHSADRQVCGKQMDSTNGSRIPCYELVKMPDGTNV
Ga0126380_100738594	3300010043	Tropical Forest Soil	MAETFKCPHCGAVYEIRHDKVVSEDNRLAHCEVCGKQMDARNGSDIRHYELVKMPDGTNV
Ga0126380_107608401	3300010043	Tropical Forest Soil	MAQTFQCPRCGAVYQVTYDKAMSKDNRLAHCEVCGKQMDARNGSTIRHYELVKMPDGTNV
Ga0126384_103116994	3300010046	Tropical Forest Soil	PHCGAVYEIRHDKAVSEDNRLAHCEVCGKQMDARTGSDIRHYELVKMPDGTNV*
Ga0126384_111203191	3300010046	Tropical Forest Soil	MYIFQMTETFKCPQCGALYEIRHDKAVSDDNLSADCQICGEQMDARNGSSIRCYELIKMPDGTNV*
Ga0126384_111969432	3300010046	Tropical Forest Soil	MAETFKCPHCGALYEIITDEKTASDDKDAADCRVCGKQMDVAKGWSILRYELVKMPGGTNV*
Ga0126382_115178412	3300010047	Tropical Forest Soil	EMAETFRCPHCRALYEIRYDKGVTDDNRLAHCQVCGKQMDARNGSSIRHYELVKMPDGTNV*
Ga0126373_130649432	3300010048	Tropical Forest Soil	MAEIFKCPHCGAGYEIRYDKAVSEDNRLAHCEVCGKQMDARNGSDIRHYELVKMPDGTNV
Ga0126370_103443762	3300010358	Tropical Forest Soil	MYIFQMTETFKCPQCGALYEIRHDKAVSDDNPPADCQICGKQMDARNGSSIRCYELIKMPDGTNV*
Ga0126370_108447452	3300010358	Tropical Forest Soil	MAETFKCPHCGAVYEIRHDKAVSEDNRLAHCEVCGKQMDARTGWDIRHYELVKMPDGTNV
Ga0126370_118642372	3300010358	Tropical Forest Soil	MAETLKCPHCGALYEIIRYEKAVPHDKDAADCQVCGKQMDLTNGSSIPHYELVKMPDGTNV*
Ga0126378_112633822	3300010361	Tropical Forest Soil	MAETFKCPHCGALYEIIRYEKAVPHDKDAADCQVCGKQMDLTNGSSIPHYELVKMPDGTNV*
Ga0126379_111168061	3300010366	Tropical Forest Soil	MYIFQMTETFKCPQCGALYEIRHDKAVSDDNPPADCQICGKQMDARNDSSIRCYELIKMPDGTNV*
Ga0126379_117767901	3300010366	Tropical Forest Soil	MAETFKCPHCGAGYEIRYDKAVSEDNRLAHCEVCGKQMDARNGSDIRHYELVKMPDGTNV
Ga0126383_101540763	3300010398	Tropical Forest Soil	MAETFKCPHCGAVYEIRHDKVVSEDNRLAHCEVCGKQMDARNGSDIRYYYKLVKMPDGTNV*
Ga0126383_110250712	3300010398	Tropical Forest Soil	MAETFKCPHCGAVYEIRYDKAVYEDNRLAHREVCGKRMDARNGSDIRHYELVKMPDGTNV
Ga0126383_129319211	3300010398	Tropical Forest Soil	MAETFKCPHCGAVYEIRHDKAVSEDNRLAHCEVCGKQMDARTGSDIRHYELVKM
Ga0120191_100027852	3300012022	Terrestrial	MTETFKCPHCGALYEIIAHEKTVSDDKNTAECKVCGKRMSVTNGSRILNYELVRMPDGTNV*
Ga0137383_100722563	3300012199	Vadose Zone Soil	MAETFKCPHCGALYEIIRYEKAVPHDKDAADCQVCGKQMDMTNGSSIPHYELVKMPDGTNV*
Ga0137365_101152513	3300012201	Vadose Zone Soil	MAETFKCPHCGALYEIIAHERTVSDDKDVADCQVCGKRINATNGSRILRYELVRMPDGTNV*
Ga0137365_106742681	3300012201	Vadose Zone Soil	MAETFKCPHCGALYEIIRYEKAVPHDKDAADCQVCGKQMDMTSGSSIPHYELVKMPDGTNV*
Ga0137374_100306772	3300012204	Vadose Zone Soil	MAETFKCPHCGALYEIIAHERTVSDDKDVADCQVCGRRMDATNGSRILRYELVRMPDGTNV*
Ga0137374_112873091	3300012204	Vadose Zone Soil	MTETFKCPHCGALYEIIAHEKTVSDDKNAAQCKVCGKRMSVPNGSRILNYELVRMPDGTNV*
Ga0137362_101120581	3300012205	Vadose Zone Soil	CGAVYEIRYDKAVSEDNRLAYCEVCGKQMDARNGSDIRHYELVKMPDGTNV*
Ga0137362_103978212	3300012205	Vadose Zone Soil	MPQTHNARIVGALYEVVYEKTISGDKRTANCQVCGKQMNSRNGSGIPHYELVKMPDGTNV
Ga0137381_102816153	3300012207	Vadose Zone Soil	MAETFKCPHCGALYEIIRYEKAVPHDKDAAECQVCGKQMDMTNGSSIPHYELVKMPDGTNV*
Ga0137376_107500522	3300012208	Vadose Zone Soil	MAETFKCPHCGAVYEIRYDKAVYEGNRLAYCEVCGKQMDARNGSDIRHYELVKMPDGTNV
Ga0137378_100108307	3300012210	Vadose Zone Soil	MAETFKCPHCGALYEIIRYEKAVPHDKDAADCQVCGKQMDTTNGSSIPHYELVKMPDGTNV*
Ga0137370_108674882	3300012285	Vadose Zone Soil	MAEPFKCPHCGALYDIIADEKTVSDDKDAAECQVCGKQMDVTTGSSILRYELVKTPDGTNV*
Ga0137372_109704711	3300012350	Vadose Zone Soil	MAETFKCPHCGALYEIIRYEKAVPHDKDAADCQVCGKQMDMTNGSSIPDYELVKMPDGTNV*
Ga0137366_107376582	3300012354	Vadose Zone Soil	MAETFKCPHCGALYEIIAHERTVSDDKDVADCQVCGRRMDATSGSRILRYELVRMPDGTNV*
Ga0137371_102679652	3300012356	Vadose Zone Soil	MPQTHKCPHCGALYEVVYEKTISGDKRTANCQVCGKQMDSRNGSGPHYELVKMPDGTNV*
Ga0137368_103875682	3300012358	Vadose Zone Soil	MTETFKCPHCGALYEIIAHEKTVSDDKNAAQCKVCGKRMSVTNGSRILNYELVRMPDGTNV*
Ga0137361_117325601	3300012362	Vadose Zone Soil	MAETFKCPHCGAVYEIRYDKAVSEDNRLAYCEVCGKQMDARNGSDIRHYELVKMPDGTNV
Ga0137358_103327122	3300012582	Vadose Zone Soil	MAETFKCPHCGAVYEIRYDKAVSEGNRLAYCEVCGKQTDARNGSDIRHYELVKMPDGTNV
Ga0137395_108017782	3300012917	Vadose Zone Soil	MPQTHKCPHCGALYEVVYEKTISGDKRTANFQVCGKQMDSRTGSGIPHYELVKMPDGTNV
Ga0126375_102077401	3300012948	Tropical Forest Soil	EYIFEMAETFKCPHCGAVYEIRYDKAVSEDNRLAHCEVCGKRMDARNGSDIRHYELVKMPDGTNV*
Ga0126369_106917643	3300012971	Tropical Forest Soil	MAETFKCPHCGAVYEIRYDKAVSEGNLAYCEVCGKQMDARNGSDIRHYELVKMPDGTNV*
Ga0126369_110135122	3300012971	Tropical Forest Soil	MAEIFKCPHCGAGYEIRYDKAVSEDNRLAHCEVCGKQMDARNGSDIRHYELVKMPDGTQV
Ga0126369_125937651	3300012971	Tropical Forest Soil	MYIFQMTETFKCPQCGALYEIRHDKAVSDDNPPADCQICGKQMDARNGSSIRCYELIK
Ga0126369_134492251	3300012971	Tropical Forest Soil	MAETFKCPHCGAVYEIRHDKAVSEDNRLANCEVCGKQMDARNGSDIRHYELVKMPDG
Ga0182033_105707032	3300016319	Soil	YEVTYEKTISGDKGMANCQVCEQMESSRNGESIPHYELVKMPDGTNV
Ga0182035_101700711	3300016341	Soil	MAETFKCPHCGAVYEIRHDKAVSEDNRLAYCEVCGKQMDARNGSDIRH
Ga0182035_117535412	3300016341	Soil	VYEIRHDKAVSEDNRLAHCEVCGKQMDARNGSSIRHYELVKMPDGTNV
Ga0182032_116648371	3300016357	Soil	MAETFRCPHCRALYEIRYDKGVTDANRLAHCQVCGKQMDARNGSSIRYYELVK
Ga0182040_115943461	3300016387	Soil	MAETFKCPHCGAVYEIRYDKAVSEDNRLAHCEVCGKRMDANGSDIRHYELVKMPDGTSV
Ga0182040_119636692	3300016387	Soil	GALYEIRYEKTAFHDKSAADCQVCGKHMASTEGSIVPQYELIRLPDGTNV
Ga0182037_113579791	3300016404	Soil	TFKCPHCGAVYEIRHDKAVSEDNRLAHCEVCGKQMDARTGSDIRHYELVKMPDGTNV
Ga0182039_108203622	3300016422	Soil	MAETFKCPHCGVVYEIRYDKAVSEDNRLAHCEVCGKQMDARTGSDIRHYE
Ga0182039_122145471	3300016422	Soil	PHCGAVYEIRYDKAVSEDNRLAHCEVCGKQMDTRNGSDIRHYELVKMPDGTNV
Ga0182038_103948991	3300016445	Soil	KCPHCGAVYEIRHDKAVSEDNRLVHCEVCGKQMDARNGSDTRHYELVKMPDGTNV
Ga0182038_117965811	3300016445	Soil	MAETFKCPHCGAVYEIRYDKAVSEDNRLAHCEVCGKQMDARNGSDIRHYELVKMPD
Ga0066667_103911981	3300018433	Grasslands Soil	MAETFKCPHCGALYEIIAHERTVSDDKDVADCQVCGKRINATSGSRILRYELVRMPDGPN
Ga0066662_115068181	3300018468	Grasslands Soil	MAETFKCPHCGAVYEIRYDKAVSEGNRLAYCEVCGKQMDARNGSDIRHYELVKMPDGTNV
Ga0066669_104309922	3300018482	Grasslands Soil	MAETFKCPHCGALYEIIAHERTVSDDKDVADCQVCGKRINATNGSRILRYELVRMPDGTN
Ga0126371_107686701	3300021560	Tropical Forest Soil	LYEITYEKTDADDNHAADCQVCGKRMDSSNSSNIPCYELVKMPDGTRV
Ga0126371_109257271	3300021560	Tropical Forest Soil	MYIFQMTETFKCPQCGALYEIRHDKAVSDDNPPADCQICGKQMDARNGSSIRCYELIKMPDGTNV
Ga0207646_106728151	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MAETFKCPHCGALYEIIRYEKAVPHDKDAADCQVCGKQMDMTNGSSIPHYELVKMPDGTN
Ga0209350_11178012	3300026277	Grasslands Soil	MAETFKCPHCGALYEIIAHERTVSDDKDVADCQVCGKQMDSTKGSSIPCYELVKMPDSTN
Ga0209154_12619822	3300026317	Soil	AETFKCPHCGALYEIIAHERTVSDDKDVADCQVCGKRINATSGSRILRYELVRMPDGTNV
Ga0209466_10492791	3300027646	Tropical Forest Soil	TFKCPHCGAVYEIRYDKAVSEDNRLAHCEVCGKQMDARNGSDIRHYELVKMPDGTNV
Ga0209814_100111136	3300027873	Populus Rhizosphere	MAKTFKCPHCGALYEIITDEKTVSEDKDAADCRVCGKRMDVTKGSSILRYELVKMPDGTN
Ga0209814_100943632	3300027873	Populus Rhizosphere	MAETFKCPHCGALYEIISDEKIVSEDTGAADCRLCGKQMDVTKGSNLRYELVQMPDGTNV
Ga0209814_103075071	3300027873	Populus Rhizosphere	MTETFKCPHCGALYEIIAHEKTVSDDKNAAECKVCGKRMSVTNGSRILRY
Ga0209814_105618571	3300027873	Populus Rhizosphere	MAETFKCPHCGALYEIITDEKTVSEDKDAADCRVCGKQMDVTKGSSILSYELVKMPDGTN
Ga0207428_109843781	3300027907	Populus Rhizosphere	TSLDADTWSGYVHAMAKTFKCPHCGALYEIITDEKTVSEDKDAADCRVCGKRIDVTKGSSILRYELVKMPDGTNV
Ga0209382_100143913	3300027909	Populus Rhizosphere	MTETFKCPHCGALYEIIAHEKTVSDDKNAAECKVCGKRMSVTNGPRILNYELVRMPDGTN
Ga0307317_101946941	3300028720	Soil	MAEPFKCPHCGALYDIIADEKTVSDDKDAAECQVCGKQMDVTTGSSILRYELVKMPDGTN
Ga0307290_103179851	3300028791	Soil	QTWSRYIHPMAEPFKCPHCGALYDIIADEKTVSDDKDAAECQVCGKQMDVTTGSGILRYELVKMPDGTNV
Ga0307278_105081062	3300028878	Soil	IFVSMTETFKCPHCGALYEIIAHEKTVSDDKNAAQCKVCGKRMSVTNGSRILNYELVRMPDGTNV
Ga0318516_106806912	3300031543	Soil	MAETFKCPHCGALYEIIRYEKAVPHDKDAADCQVCGKQMDLTNGSSIPHYELVKMPDGTN
Ga0318541_101869622	3300031545	Soil	MAETFKCPHCGALYEIVRYEKAVPHDKDAADCQVCGKQMDLTNGSSIPHYELVKMPDGTN
Ga0318573_103869582	3300031564	Soil	MAETFKCPHCGAVYEIKYDKVVSEDNRLAHCEVCGKQMDARNGSDIRHYELVKMPDGTNV
Ga0318515_102625291	3300031572	Soil	MAETFKCPHCGAVYEIRHDKAVSEDNRLAHCEVCGKQMDARTGSDIRHYELVKMP
Ga0318561_103181631	3300031679	Soil	MAETFKCPHCGAVYEIRHDKAVSEDNRLAHCEVCGKQMDARTGSDIRHYE
Ga0318561_103300672	3300031679	Soil	FKCPHCGAVYEIRHDKAVSEDNRLAHCEVCGKQMDARTGSDIRHYELVKMPDGTNV
Ga0318574_100188755	3300031680	Soil	MAETFKCPHCGALYEIIRYEKAVPHDKDAADCRVCGKQMDLTNGSSIPHYELVKMPDGTN
Ga0318572_102062262	3300031681	Soil	MAETFKCPHCGAVYEIRHDKAVSEDNRLAHCEVCGKQMGARNGSDIRHYELVKMPDGTNV
Ga0318572_108080082	3300031681	Soil	SQGTLYEIIRYEKAVPHDKDAADCQVCGKQMDLTNGSSIPHYELVKMPDGTNV
Ga0318500_106022441	3300031724	Soil	YIFEMAETFKCPHCGAVYEIRYDKAVSEDNRLAHCEVCGKRMDANGSDIRHYELVKMPDGTSV
Ga0318501_101819203	3300031736	Soil	MAETVKCPHCGALYEIRYEKTAFHDKSAADCQVCGKHMASTEGSIVPHYELVT
Ga0318546_103387413	3300031771	Soil	MAETFRCPHCRALYEIRYDKGVTDDNRLAHCQVCGKQMDARNGSSIRYYELVKMTDG
Ga0318547_103243653	3300031781	Soil	VYEIRYDKAVSEDNRLAHCEVCGKQMDTRNGSDIRHYELVKMPDGTNV
Ga0306925_107145923	3300031890	Soil	CGALYEIKYEKTAFHDKSAADCQVCGKHMASTEGSIVPHYELIRMLDGTNV
Ga0306925_112001812	3300031890	Soil	EMAETFKCPHCGAVYEIKYDKVVSEDNRLAHCEVCGKQMDARNGSDIRHYELVKMPDGTN
Ga0306921_117077072	3300031912	Soil	MAETFKCPHCGAVYEIRHDKAVSEDNRLAHCEVCGKQMDARNGSDIRYYELVKMPDGTNV
Ga0306921_117945351	3300031912	Soil	MAETFKCPHCGAVYEIKYDKVVSEDNRLAHCEVCGKQMDARNGSDIRHYELVK
Ga0310916_102001902	3300031942	Soil	MAETVKCPHCGALYEIKYEKTAFHDKSAADCQVCGKHMASTEGSIVPHYELIRMLDGTNV
Ga0310916_105447872	3300031942	Soil	MAETSKCPHCGAVYEIRHDKAVSEDNRLAHCEVCGKQMDARTGSDIRHYELVKMPDGTNV
Ga0310916_116336662	3300031942	Soil	PHCGALYEIIRYEKAVPHDKDAADCQVCGKQMDLTNGSSIPHYELVKMPDGTNV
Ga0310913_105740222	3300031945	Soil	MAETFQCPHCGAVYEIRYDKAVSEDNRLAYCEVCGKQMDARNGSDIRHYELVKMPDDTNV
Ga0310910_111775861	3300031946	Soil	KCPHCGALYEITYRNVSHDKDEAHCQVCGKQMVSTTGSSIASYELVSMPDGTNV
Ga0310909_105477803	3300031947	Soil	HCGAVYEIRHDKAVSEDNRLAHCEVCGKQMDARNGSDIRYYELVKMPDGTNV
Ga0310909_107372642	3300031947	Soil	MAETFKCPHCGAVYEIRYDKAVSEDNRLAHCEVCGKQMDTRNGSDIRHY
Ga0310909_113325102	3300031947	Soil	IFEMAETFKCPHCGAVYEIRYDKAVSEDNRLAHCEVCGKQMDARNGSDIRHYELVKMPDGTNV
Ga0306926_101454333	3300031954	Soil	MAETFKCPHCGAVYEIRHDKAVSEDNRLAHCEVCGKQMGTRNGSDIRHYELVKMPDGTNV
Ga0306926_111848373	3300031954	Soil	MAETFKCPHCGAVYEIRYDKAVSEDNRLAHCEVCGKQMDTRNGSDIRHYELVKMPDGTNV
Ga0306922_100806744	3300032001	Soil	MAETFKCPHCGAVYEIRHDKAVSEDNRLAHCEVCGKQMDARNGSDTRHYELVKMPDGTNV
Ga0306922_105451271	3300032001	Soil	YEIRYEKTAFHDKSATDCQVCGKHMASTEGSSVPHYELVRMPDDTNV
Ga0310911_103465612	3300032035	Soil	GALYEIRYEKTAFHDKSAADCQVCGKHMASTEGSIVPHYELVTMPDGTDV
Ga0318549_101182834	3300032041	Soil	EMAETFKCPHCGAVYEIRHDKAVSEDNRLAHCEVCGKQMDARTGSDIRHYELVKMPDGTN
Ga0306924_107296052	3300032076	Soil	MAETFKCPHCGAVYEIKYDKVVSEDNRLAHCEVCGKQMDARNGSDIRHYELVKMP
Ga0306924_111044681	3300032076	Soil	KCPHCGAVYEIRYDKAVSEDNRLAHCEVCGKQMDTRNGSDIRHYELVKMPDGTNV
Ga0306920_1000788189	3300032261	Soil	MAETFKCPHCGAVYEIRYDKAVSEDNRLAYCEVCGKQMDARNGSDIRHYELVKMPDDTNV
Ga0306920_1002307011	3300032261	Soil	MAETFKCPHCGAVYEIKYDKVVSEDNRLAHCEVCGKQMDARNGSDIRHYEL
Ga0310914_111570732	3300033289	Soil	GALYQVTYEKIVSPNKAAANCQVCGKQMDSANGSSIPCYELVKMPDGTNV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F041858

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences