Metagenome / Metatranscriptome Family F041890

Basic Information
Family ID	F041890
Family Type	Metagenome / Metatranscriptome
Number of Sequences	159
Average Sequence Length	80 residues
Representative Sequence	MLHKKGKKESGNSTRASVKKEMAKPRMARSAKIAELNLDPARIPERPSVTMPGTVDKIIPSPRPTQPEKAQIAVDGAD
Number of Associated Samples	119
Number of Associated Scaffolds	159

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	43.05 %
% of genes near scaffold ends (potentially truncated)	79.87 %
% of genes from short scaffolds (< 2000 bps)	81.76 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Most Common Taxonomy
Group	Unclassified (54.717 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (15.723 % of family members)
Environment Ontology (ENVO)	Unclassified (28.931 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.780 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.30% β-sheet: 0.00% Coil/Unstructured: 71.70%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 159 Family Scaffolds
PF13545	HTH_Crp_2	5.66
PF05532	CsbD	3.14
PF06210	DUF1003	1.26
PF05239	PRC	1.26
PF00175	NAD_binding_1	1.26
PF00027	cNMP_binding	1.26
PF05974	DUF892	1.26
PF01381	HTH_3	1.26
PF05368	NmrA	0.63
PF11752	DUF3309	0.63
PF05598	DUF772	0.63
PF00440	TetR_N	0.63
PF07992	Pyr_redox_2	0.63
PF13466	STAS_2	0.63
PF04972	BON	0.63
PF07238	PilZ	0.63
PF02371	Transposase_20	0.63
PF04193	PQ-loop	0.63
PF13883	Pyrid_oxidase_2	0.63
PF02735	Ku	0.63
PF00990	GGDEF	0.63
PF07690	MFS_1	0.63
PF01266	DAO	0.63
PF00483	NTP_transferase	0.63
PF13442	Cytochrome_CBB3	0.63
PF13827	DUF4189	0.63
PF08447	PAS_3	0.63

COG ID	Name	Functional Category	% Frequency in 159 Family Scaffolds
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	3.14
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	1.26
COG4420	Uncharacterized membrane protein	Function unknown [S]	1.26
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	0.63
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.63

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.72 %
All Organisms	root	All Organisms	45.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.72 %
cellular organisms	root	All Organisms → cellular organisms	45.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.72 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	28.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.72 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	21.38 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.38 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.26 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.38 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.26 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	0.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.38 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.26 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.63 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_101822088	All Organisms → cellular organisms → Bacteria → Acidobacteria	1580	Open in IMG/M
3300001593\|JGI12635J15846_10146795	All Organisms → cellular organisms → Bacteria	1623	Open in IMG/M
3300001593\|JGI12635J15846_10247254	All Organisms → cellular organisms → Bacteria	1147	Open in IMG/M
3300001593\|JGI12635J15846_10609569	Not Available	634	Open in IMG/M
3300002245\|JGIcombinedJ26739_100494340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1100	Open in IMG/M
3300002245\|JGIcombinedJ26739_100773740	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	840	Open in IMG/M
3300002245\|JGIcombinedJ26739_101087731	Not Available	686	Open in IMG/M
3300002347\|JGIcombinedJ26865_1062181	Not Available	595	Open in IMG/M
3300004092\|Ga0062389_103659541	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300004137\|Ga0058883_1342846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	805	Open in IMG/M
3300004631\|Ga0058899_11889830	Not Available	595	Open in IMG/M
3300005330\|Ga0070690_101361140	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300005338\|Ga0068868_100676100	Not Available	921	Open in IMG/M
3300005444\|Ga0070694_100083185	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2230	Open in IMG/M
3300005534\|Ga0070735_10003830	All Organisms → cellular organisms → Bacteria	12982	Open in IMG/M
3300005591\|Ga0070761_10067085	All Organisms → cellular organisms → Bacteria	2032	Open in IMG/M
3300005712\|Ga0070764_10434922	Not Available	780	Open in IMG/M
3300005921\|Ga0070766_10509669	All Organisms → cellular organisms → Bacteria → Acidobacteria	800	Open in IMG/M
3300005921\|Ga0070766_11186590	Not Available	528	Open in IMG/M
3300005995\|Ga0066790_10076175	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1444	Open in IMG/M
3300006059\|Ga0075017_100812141	Not Available	723	Open in IMG/M
3300006176\|Ga0070765_100496548	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1146	Open in IMG/M
3300006638\|Ga0075522_10002293	All Organisms → cellular organisms → Bacteria	14289	Open in IMG/M
3300006893\|Ga0073928_10071435	All Organisms → cellular organisms → Bacteria → Acidobacteria	3011	Open in IMG/M
3300006893\|Ga0073928_10491494	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300009029\|Ga0066793_10640149	Not Available	605	Open in IMG/M
3300009093\|Ga0105240_12619909	Not Available	521	Open in IMG/M
3300009101\|Ga0105247_11434763	Not Available	560	Open in IMG/M
3300009547\|Ga0116136_1156389	Not Available	577	Open in IMG/M
3300009553\|Ga0105249_11133691	Not Available	852	Open in IMG/M
3300009624\|Ga0116105_1208829	Not Available	541	Open in IMG/M
3300010371\|Ga0134125_10720286	Not Available	1099	Open in IMG/M
3300010397\|Ga0134124_13121791	Not Available	507	Open in IMG/M
3300010401\|Ga0134121_11389603	All Organisms → cellular organisms → Bacteria → Acidobacteria	712	Open in IMG/M
3300011120\|Ga0150983_14401631	Not Available	512	Open in IMG/M
3300011271\|Ga0137393_10818779	Not Available	796	Open in IMG/M
3300012927\|Ga0137416_10626538	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	939	Open in IMG/M
3300012957\|Ga0164303_10674606	Not Available	692	Open in IMG/M
3300013296\|Ga0157374_10942864	Not Available	881	Open in IMG/M
3300013297\|Ga0157378_10039897	All Organisms → cellular organisms → Bacteria	4164	Open in IMG/M
3300013308\|Ga0157375_12069460	Not Available	677	Open in IMG/M
3300014169\|Ga0181531_10623680	All Organisms → cellular organisms → Bacteria → Acidobacteria	669	Open in IMG/M
3300014200\|Ga0181526_10010368	All Organisms → cellular organisms → Bacteria	6435	Open in IMG/M
3300014200\|Ga0181526_11082474	Not Available	503	Open in IMG/M
3300014201\|Ga0181537_10925935	Not Available	590	Open in IMG/M
3300014489\|Ga0182018_10021720	All Organisms → cellular organisms → Bacteria	4217	Open in IMG/M
3300014489\|Ga0182018_10038343	All Organisms → cellular organisms → Bacteria	2997	Open in IMG/M
3300014489\|Ga0182018_10043096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2795	Open in IMG/M
3300014489\|Ga0182018_10133503	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1428	Open in IMG/M
3300014489\|Ga0182018_10281452	Not Available	908	Open in IMG/M
3300014489\|Ga0182018_10406249	Not Available	728	Open in IMG/M
3300014495\|Ga0182015_10031191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4113	Open in IMG/M
3300014495\|Ga0182015_10133085	Not Available	1701	Open in IMG/M
3300014495\|Ga0182015_10133989	Not Available	1694	Open in IMG/M
3300014495\|Ga0182015_10476108	Not Available	800	Open in IMG/M
3300014495\|Ga0182015_10661548	Not Available	660	Open in IMG/M
3300014495\|Ga0182015_10698416	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300014495\|Ga0182015_10842594	Not Available	575	Open in IMG/M
3300014495\|Ga0182015_11007279	Not Available	516	Open in IMG/M
3300014498\|Ga0182019_10008811	All Organisms → cellular organisms → Bacteria	5271	Open in IMG/M
3300014501\|Ga0182024_10204103	All Organisms → cellular organisms → Bacteria	2699	Open in IMG/M
3300014501\|Ga0182024_10349742	All Organisms → cellular organisms → Bacteria	1932	Open in IMG/M
3300014501\|Ga0182024_10372346	All Organisms → cellular organisms → Bacteria	1858	Open in IMG/M
3300014501\|Ga0182024_10745812	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1201	Open in IMG/M
3300014501\|Ga0182024_11976747	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300014501\|Ga0182024_12692046	Not Available	532	Open in IMG/M
3300014654\|Ga0181525_10396830	Not Available	758	Open in IMG/M
3300014657\|Ga0181522_10757376	Not Available	594	Open in IMG/M
3300014838\|Ga0182030_11396398	Not Available	584	Open in IMG/M
3300015193\|Ga0167668_1085086	Not Available	607	Open in IMG/M
3300016750\|Ga0181505_10803994	All Organisms → cellular organisms → Bacteria → Acidobacteria	1251	Open in IMG/M
3300018034\|Ga0187863_10658271	Not Available	590	Open in IMG/M
3300019786\|Ga0182025_1210250	Not Available	2301	Open in IMG/M
3300019786\|Ga0182025_1311639	Not Available	1677	Open in IMG/M
3300019788\|Ga0182028_1298083	Not Available	2115	Open in IMG/M
3300020579\|Ga0210407_10415172	Not Available	1053	Open in IMG/M
3300020580\|Ga0210403_10532227	Not Available	953	Open in IMG/M
3300020582\|Ga0210395_10301451	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1205	Open in IMG/M
3300021088\|Ga0210404_10842752	Not Available	524	Open in IMG/M
3300021170\|Ga0210400_11221000	Not Available	605	Open in IMG/M
3300021178\|Ga0210408_10447595	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1028	Open in IMG/M
3300021180\|Ga0210396_11209501	Not Available	632	Open in IMG/M
3300021180\|Ga0210396_11268563	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300021401\|Ga0210393_10516242	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	976	Open in IMG/M
3300021402\|Ga0210385_10929963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300021405\|Ga0210387_10186465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1794	Open in IMG/M
3300021407\|Ga0210383_10609362	Not Available	941	Open in IMG/M
3300021420\|Ga0210394_10498870	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1071	Open in IMG/M
3300021420\|Ga0210394_10757779	Not Available	849	Open in IMG/M
3300021432\|Ga0210384_11425428	Not Available	598	Open in IMG/M
3300021433\|Ga0210391_11465316	Not Available	524	Open in IMG/M
3300025862\|Ga0209483_1001694	All Organisms → cellular organisms → Bacteria	16448	Open in IMG/M
3300025862\|Ga0209483_1036871	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	2381	Open in IMG/M
3300025916\|Ga0207663_11214051	Not Available	607	Open in IMG/M
3300025934\|Ga0207686_10121244	All Organisms → cellular organisms → Bacteria → Acidobacteria	1780	Open in IMG/M
3300025938\|Ga0207704_10799704	Not Available	787	Open in IMG/M
3300025939\|Ga0207665_11611052	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300025961\|Ga0207712_10817023	Not Available	820	Open in IMG/M
3300026023\|Ga0207677_11497220	Not Available	623	Open in IMG/M
3300027523\|Ga0208890_1023052	Not Available	905	Open in IMG/M
3300027537\|Ga0209419_1019920	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1219	Open in IMG/M
3300027562\|Ga0209735_1122960	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300027565\|Ga0209219_1140570	Not Available	584	Open in IMG/M
3300027591\|Ga0209733_1164272	Not Available	533	Open in IMG/M
3300027605\|Ga0209329_1050114	Not Available	889	Open in IMG/M
3300027610\|Ga0209528_1128736	Not Available	557	Open in IMG/M
3300027645\|Ga0209117_1133893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300027745\|Ga0209908_10061534	Not Available	856	Open in IMG/M
3300027853\|Ga0209274_10154033	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1158	Open in IMG/M
3300027908\|Ga0209006_10023078	All Organisms → cellular organisms → Bacteria	5635	Open in IMG/M
3300027986\|Ga0209168_10004339	All Organisms → cellular organisms → Bacteria	9435	Open in IMG/M
3300028047\|Ga0209526_10232204	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1268	Open in IMG/M
3300028047\|Ga0209526_10979993	Not Available	507	Open in IMG/M
3300028746\|Ga0302233_10147717	Not Available	910	Open in IMG/M
3300028747\|Ga0302219_10041209	All Organisms → cellular organisms → Bacteria	1724	Open in IMG/M
3300028759\|Ga0302224_10475054	Not Available	511	Open in IMG/M
3300028759\|Ga0302224_10484203	Not Available	506	Open in IMG/M
3300028775\|Ga0302231_10177031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	891	Open in IMG/M
3300028780\|Ga0302225_10181693	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1015	Open in IMG/M
3300028780\|Ga0302225_10252389	Not Available	842	Open in IMG/M
3300028789\|Ga0302232_10630267	Not Available	527	Open in IMG/M
3300028800\|Ga0265338_10160773	Not Available	1735	Open in IMG/M
3300028800\|Ga0265338_11017928	Not Available	560	Open in IMG/M
3300028806\|Ga0302221_10304801	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300029910\|Ga0311369_10955003	Not Available	680	Open in IMG/M
3300029943\|Ga0311340_10387073	Not Available	1291	Open in IMG/M
3300029993\|Ga0302304_10266690	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300029999\|Ga0311339_10087665	All Organisms → cellular organisms → Bacteria	3909	Open in IMG/M
3300030007\|Ga0311338_10485927	All Organisms → cellular organisms → Bacteria	1299	Open in IMG/M
3300030057\|Ga0302176_10140593	Not Available	955	Open in IMG/M
3300030399\|Ga0311353_10659322	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	908	Open in IMG/M
3300030520\|Ga0311372_12364199	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300030524\|Ga0311357_11261472	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300030862\|Ga0265753_1106955	Not Available	573	Open in IMG/M
3300031231\|Ga0170824_103508940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1095	Open in IMG/M
3300031234\|Ga0302325_12782125	Not Available	574	Open in IMG/M
3300031236\|Ga0302324_102313089	Not Available	663	Open in IMG/M
3300031236\|Ga0302324_102921625	Not Available	571	Open in IMG/M
3300031241\|Ga0265325_10084801	All Organisms → cellular organisms → Bacteria → Proteobacteria	1570	Open in IMG/M
3300031241\|Ga0265325_10112835	Not Available	1319	Open in IMG/M
3300031247\|Ga0265340_10121284	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1203	Open in IMG/M
3300031250\|Ga0265331_10551996	Not Available	519	Open in IMG/M
3300031525\|Ga0302326_11481384	All Organisms → cellular organisms → Bacteria → Acidobacteria	911	Open in IMG/M
3300031708\|Ga0310686_103907602	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	833	Open in IMG/M
3300031708\|Ga0310686_114339694	All Organisms → cellular organisms → Bacteria	2627	Open in IMG/M
3300031708\|Ga0310686_116961760	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1138	Open in IMG/M
3300031754\|Ga0307475_10482226	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300031823\|Ga0307478_11372036	Not Available	587	Open in IMG/M
3300031837\|Ga0302315_10340953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	849	Open in IMG/M
3300031962\|Ga0307479_10596004	Not Available	1087	Open in IMG/M
3300032756\|Ga0315742_13592138	Not Available	501	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.68%
Host-Associated	Host-Associated	11.32%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.87%
Plants	Host-Associated → Plants	11.32%
Aquatic	Environmental → Aquatic	8.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.15%
Peat	Environmental → Terrestrial → Peat	15.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.43%
Freshwater	Environmental → Aquatic → Freshwater	6.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.89%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.26%
Sediment	Environmental → Aquatic → Sediment	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	25.79%
Loam	Environmental → Terrestrial → Soil → Loam	19.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	18.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	15.72%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.66%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.77%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.89%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	18.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	15.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.21%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.43%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.77%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.89%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.26%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.63%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.63%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	15.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	13.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.06%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	8.80%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	6.29%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.77%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	3.77%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.52%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.89%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.26%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.26%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.26%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.26%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.26%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.26%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.63%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.63%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.63%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.63%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.63%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.63%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.63%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.63%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002347	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012 (NGEE Surface samples 415 (1, 2, 3 deep-072012) AP id is 1030520, ASSEMBLY_DATE=20131219)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004137	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028746	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_1	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029993	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_2	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031250	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG	Host-Associated	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031837	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_1	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1018220881	3300000955	Soil	MTHKKHRKESDATTYASVKKELAKPRMTKSARIAELNLDLTQIPEQPSTSMSGTVDKIIPSPRPSQPENAQIAVD
JGI12659J15293_101503261	3300001546	Forest Soil	MAHKITKKQLAMATQASVRQEMAKPRMARSAKIAELNLDRTRIPEQPSITMPGRVSKIVPPP
JGI12635J15846_101467953	3300001593	Forest Soil	MRKKFKKRSVHATRASVKKEMAKPRMARSARIAELRLDTERIVERPSTTMPGKVDKIIPSPRPSQPEKAQIGVDGPDHRYR
JGI12635J15846_102472542	3300001593	Forest Soil	MAHKIVKKESGKAKRVGVSEEMAKPRMARSAKIGLLNLDADRIQEQPTVTMPGTVNKIIPSPSPSRPEKAQVAVDG
JGI12635J15846_106095692	3300001593	Forest Soil	MAHKKRKKEAGGATRAGVKKEMAKPRMARSARITELNLDTARTREQPSTTMPGTVDKIIPSPRPSQPEEAQIAVDKAG
JGIcombinedJ26739_1004943403	3300002245	Forest Soil	MMRRDLVTLFLVEDMRRMKRKKEPGNATRVSVKKEMAKPRMARSARITELNLDTARIPEQPTITMPGTVDKIIPSLRPGQPEKVQIAVDVAAPRHRDHLLIENTL
JGIcombinedJ26739_1007737402	3300002245	Forest Soil	TRASVKKEMAKPRMAKSARIAELNLDTARTHEHPSTSMPGTVDKVIPSRRPNRPEKAQIAVDEADHGYRDSASKIH*
JGIcombinedJ26739_1010877311	3300002245	Forest Soil	MLHKKSNKESGNTIRASVKKEMVTPRMARSARITELNLNAARISEQPSTTMPGTVDKIIPSPGPGQPEKAQIAIGGADHRY
JGIcombinedJ26865_10621812	3300002347	Arctic Peat Soil	MATYASVKMEMAKPRMAKSSRTAELNLDITRISEQPSTSMPGTVDKIIPSPRPSQPENARIAVDGADHGNQDLLIENTLTDE
Ga0062389_1036595411	3300004092	Bog Forest Soil	MQHKKTKKESSNTTRASVRKEMEKPRMARSARIGELSLDMSRIREQPSVTMPGTVDKIIPSPRPSQA
Ga0058883_13428461	3300004137	Forest Soil	VSALTKKVEKKTGNATRSSVEKEMAKPRVTKSARIAELNLDFSRIPEPPSATVPGTVDKIIPSPRQGQSEKAQIALDETDPRYRDFRIEIR*
Ga0058899_118898301	3300004631	Forest Soil	MLHKKTRKKTSNASLASVSWEMAKPRMARSARIAELNLDTARIPEHPSVTMPGIVKKIIPPPNPNRPEKAQIFVMGRPTASRSSV*
Ga0070690_1013611401	3300005330	Switchgrass Rhizosphere	MRQKNAEKEPGYAKRASVRTEMAKPRMARSARIAELNLDTTRTPEQPGATMAGIVDKIVPSPRPGQPEQAQIAVDGAARRYRNLRIDNTLTDEH
Ga0068868_1006761002	3300005338	Miscanthus Rhizosphere	MCMLDKKVKKELDAPTHASVRKEMAKPRMARSARIAELNLDTARIPEQPSTTMLAIVDKIIPPRPSQLERA
Ga0070694_1000831854	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MLDKKVKKELDAPTHASVRKEMAKPRMARSARIAELNLDTTRIPEQPSTTMPGIVNKIIQSRPSQLEKAQIAVEGADHAYRALRIENTLTD
Ga0070735_100038304	3300005534	Surface Soil	MRHPKINKQRGKATLASLTKEMAMPRIARSARIAELNLDSSRIVEPPSVTMPGTVDKIIPV*
Ga0070761_100670854	3300005591	Soil	MPHNKSKKERRNATRADVNEEMAKPRMARSARIAELNLDTARNIEPPSTTMPGTVKKIIPSLRANLPEKAQIAVAGAPARIEISASKIR*
Ga0070764_104349221	3300005712	Soil	MRHKDAKKVPVDTTGESVKKEMAKPRMAKSARIAERNLDTVRVPELPSTTIAGTVDKIIPSRPSQPEKAQIHIDRAGHGHPDLRIE
Ga0070766_105096691	3300005921	Soil	MKKKAKTELRNAIRATVRNEMAKPRIAKSARIAELNLDTARIAEQPSTTIPGTVDKIFPSLRPSQPEKAQIAVDGPGQGHRD
Ga0070766_111865901	3300005921	Soil	MTNNKSQQESSNAIRASVTKEMAKPRMAKSARITELNLDTGRISEQPSVTVPGTVDKIILSLGPSQPEKAQIAVDGA
Ga0066790_100761751	3300005995	Soil	MVAGTDMAKAENTTRDGVKKEMAKPRISRSARIAELKMDTSRTPATPSTTIPGTVDKIIPPRSSQPEKAQITVEAM*
Ga0075017_1008121411	3300006059	Watersheds	MLHKKAKKRLSALVSVAKEMAKPRIARSARIAELKLDTTRIPGRPSLSMPGTVEKIIPSRRPSQPEKAQITVDGADRPHRNL
Ga0070765_1004965483	3300006176	Soil	MLHKNAKKELSNATRASVKREMAKPRITRSARIAELDLDTARIPEQPSITMSGTVDKIIPSPQSSQPEQANIIVDVPD
Ga0075522_100022936	3300006638	Arctic Peat Soil	MLRKKSKKESDNSTLANVKKEMAKPRMTRSARIAELNLNTARIPEQPSVAMPGTVDKIIPPSGPNQPEKGTDCR*
Ga0073928_100714358	3300006893	Iron-Sulfur Acid Spring	VSKLNGKVTKETGSATRTSVETEMAKPRMTRSARIMELKLDTTRIPEQPSTSMPGTVKKIILAKPPSQPEKAQIAVHGADHRHRDLRIK
Ga0073928_104914942	3300006893	Iron-Sulfur Acid Spring	MPHKKTKKESGNAIRASVSKEMAKPRMARSARLGELNLDTSRIREHPSVTMPGTVDKIIPSPRPSQPEKAQI
Ga0066793_106401491	3300009029	Prmafrost Soil	MVHKKAKKQIGHATRASVKKEMAKPLMVRSARIAELNLDTTRIPEQPSATMPGTVEKIIPSPRPSQPEKAQIAVDGADH
Ga0105240_126199091	3300009093	Corn Rhizosphere	MLHKKGKKESDASTRTDVRDEMAKPRMARSARIAELNLDTARTPEQPSVAMPGTVDKIIPSPHLNQPERAQIAVDGAERGYRDLR
Ga0105247_114347631	3300009101	Switchgrass Rhizosphere	MLHKTLKKNAAKATLVNVTKEMAKPRIARSAKIAELNLDMARVSEQPSVTMPGTVDKIIPSRPSQPEKAQIAV
Ga0116136_11563892	3300009547	Peatland	MEHKKTRKEPGNATRASIRKEMAKPRMAKSARIAELNLDTTRIPEQPSVTMSGTVDKIIPSPRPSQPEKAQIAVDGADDRHQ
Ga0105249_111336912	3300009553	Switchgrass Rhizosphere	MRQKNAEKEPGYATRASVRTEMAKPRMARSARIAELNLDTARTPEQPSATMAGIVDKIVPSPRPGQPEQAQIAVD
Ga0116105_12088292	3300009624	Peatland	MPRKHKKGERKSARTTRASVLKEMAKPRTSKSARIKEMNLDTSRIPEKPSTSVPGTVDKIIPSQHSSQAEKAQIAVDGADDRH
Ga0134125_107202861	3300010371	Terrestrial Soil	MLHKKAKKESDGSTRTGVKSEMAKPRMARSARIAELKYIDNARIPEQPSVTMPGTVDKIIPSPRLNQPEKAQIAVDGA
Ga0134124_131217911	3300010397	Terrestrial Soil	MLNKKGENEPADATIASVMKEMEKPRMARSAKIAELNLDTTRIPEKASVSMPGTVEKIIPSPSPSQP
Ga0134121_113896031	3300010401	Terrestrial Soil	MLHKNLKKNAAKATLVNVTKEMAKPRIARSAKIAELNLDMARVSEQPSVTMPGTVDKIIPSRPSQP
Ga0150983_125987082	3300011120	Forest Soil	MRHKKGKKTSEEAGDATRASVRKEMARPRMAKSARMTLRNLDAGRIRERPSTTMAGTVDKTIPSSHPKQPEKA*
Ga0150983_144016312	3300011120	Forest Soil	MLHKKTRKKTSNASLASVSWEMAKPRMARSARIAELNLDTARIPEHPSVTMPGIVKKIIPPPNPNRPEKAQIFVMGRPTASISSV*
Ga0137393_108187792	3300011271	Vadose Zone Soil	MVHKKRKKAPGSATQAAVKKEMEKPRMAKSARIAELNQDTTRIPEQPSTVLPGTVEKIIPSHGPSQPEK
Ga0137416_106265381	3300012927	Vadose Zone Soil	MRHKKSKKERADTTRASVEKEIAMPRMARSARIMELILLDTTRIPGQPSTTMRGTVGKIIPSPGPRQRQRAQIAVDRADPDIGISVLKMR*
Ga0164303_106746061	3300012957	Soil	MLDKKVKKELDAPTHASVRKEMAKPRMARSARIAELNLDTARIPEQPSTTMLAIVDKIIPPRPSQLER
Ga0164306_117007472	3300012988	Soil	MLDKKVKNELDASTHASVTKEMAKPRMARSARIAELNLDTTRIPEQPSTTMPGIVAKIIPSRPS
Ga0157374_109428641	3300013296	Miscanthus Rhizosphere	MLHKKAKKQSSTLVSVTTEMAKPRIARSAKIAELNLATTRVSEQPSVTMPGTVDKIIPSRPSQPEKAQIA
Ga0157378_100398971	3300013297	Miscanthus Rhizosphere	MLHKNLKKNAAKATLVNVTKEMAKPRIARSAKIAELNLDMARVSEQPSVTMPGTVDKIIPSR
Ga0157375_120694601	3300013308	Miscanthus Rhizosphere	MLHKNLKKNAAKATLVNVTKEMAKPRIARSAKIAELNLDTTRVSEQPSVTMPGTVDKIIPSRPSQPEKAQI
Ga0181531_106236801	3300014169	Bog	MTHTTDKQESADATQASVTKEMAMPRMARSARIAELNSDTSRIPERPSSTTPGIVDKIIRPTHPNCISQE
Ga0181526_100103683	3300014200	Bog	MKHKKHRKESNAETRASVKKEMAKPRMARSARIAELNLDITRISERPSTTMPGTVDRIIPSPRRSLPEKAQIAVDGPDHRN*
Ga0181526_110824741	3300014200	Bog	MSKTKKELKKLNNATRASVREEMEKPRLARSARIAELNLDTARIREHPRVTMPGSVYRIIPSPRPSQPEKAQIAVDGADHRYRDLRI
Ga0181537_109259351	3300014201	Bog	MPHDKTKRESREARRASVAKEMAKPRMARSARIAATNLDTARTPEDPATTMPGTVDKIIPSPSPSQPEKAQIAVDRADHRYR
Ga0182018_100217203	3300014489	Palsa	MRASVRKEMAKPRMAMSARIAELNLDTARSRERPSTTMPGTVNKIIVPPGGGQPEKANIAVEGADHQYRDLRIKKYIN*
Ga0182018_100383431	3300014489	Palsa	MPHKKTKQESGTAILASVRKEMAKPRMARSARIAELNLDTARISEQPSVSMPGTVHKVIPSVRARQPDNVQIAVDEADHEYRDLRIENMLTDEHGDG
Ga0182018_100430961	3300014489	Palsa	MLRKRTKKESDTATRASVTNEMAKPRMARSARVAERNLDTARILEQPSATMPGTVDKIIPSPRPSQPEKAQITVEGADPRYRDFRIENTLTVKMVTM*
Ga0182018_101335031	3300014489	Palsa	MLHKKATKESDTVPRASVTKEMARPRMARSARITELNLDTARTRERPSTTMPGTVDKIIVSPGAGQPEKADIAIDGADHRYRDLRIEKHIN*
Ga0182018_102814521	3300014489	Palsa	MESNKATRANVTEEMAKPRMARSARIAALNLDTSRISEEPSVTMPGTVDKIIPSPRPSQP
Ga0182018_104062491	3300014489	Palsa	MSKAKKELSSVTREMKKPRMARSARIAELNLDTARIREQPSVTMPGIVHKVIPSPRAGKPEKVQIAVDEADHGYRDLRI
Ga0182015_100311912	3300014495	Palsa	MLRKRTKKESDTATRASVTNEMAKPRMARSARVAERNLDTARILEQPSATMPGTVDKIIPSPRPSQPEKAQITVEGADPRYRDLRIENTLTVKMVTM*
Ga0182015_101330853	3300014495	Palsa	MLRKGTKKESDTATRASVSNEMAKPRMARSARVAEMNLDTARIPEQPSTIMSGTVDKIIPSPRP
Ga0182015_101339891	3300014495	Palsa	MGQRGISLDVMIAFMLNKKADKLGKVTHAEVKKEMAKPRMARSARIMELKLDKGRTPEQPRTTMQGTVDKIIPARPPSQPEKAQIAVDGADHRHHDLRIKNMLTD
Ga0182015_104761081	3300014495	Palsa	MLHKKKTKNELDKATRAGVRKEMAKPRMARSAQIAELTLNSARIPEQPSVIMPGTVDKIIPPPGLGQPEKAQIAVD
Ga0182015_106615482	3300014495	Palsa	MLHKKTKRQSDSATRASVTNEMAKPRMARSARVAEMNLDTARIPEQPSTIMSGTVDKIIPSPRP
Ga0182015_106984161	3300014495	Palsa	RQKINGGMNMVLKKAKKESNDVIRASVLKEMAKPRMARSAKIAELNLDTTRIPEQPSTTLSGTVDKIIPSPRPSQPEKAQITVGGADHTHRDLRIENTLRNP*
Ga0182015_108425942	3300014495	Palsa	MLNKKGKERGDTTRASVEKEMAKPRVARSARITELSLDTARIQEQPSTTMPGTVNKIIPSPRPSQPEKAQIAVDGTDERHRHLRIDNSLTDE
Ga0182015_110072791	3300014495	Palsa	MGQRGISLDLMIAFMLNKKADKLGKVTHAEVKKEMGKPRMARSARIMELKLDKARTPEQPRTTMPGTVDKIIPARPPSQPEKAQIAVDGADHRHHDLRIKNMLTD
Ga0182019_100088117	3300014498	Fen	MAHKKHKKEPDIATYASLKKEMAKPRMAKSARIAELNLETERISQPPSTTMPGTVDRIIPSSLRSLPEKAQIAVDGPDHRNQDLSIENTLTDEHG
Ga0182024_101272661	3300014501	Permafrost	MLDKKEENEPDLATTAGVRKEMEKPRMARSARIAELNLDTTRIPEQPSVSMPGTVDKIIPSPG
Ga0182024_102041037	3300014501	Permafrost	MVHKKAKEESGKATRASVREEMAKPRMARSARIAELNLDTARISEEPSVTMPGTVDKIIPSPRPGQPEKA
Ga0182024_103497425	3300014501	Permafrost	MSKAKKELINATRASVTKEMGKPRMARSAKIAELNLDTTRIPEQPRTTMPGTVDKIIPPRPHQPEKAQIAVDGTGQRYRDLRIENTLRN
Ga0182024_103723461	3300014501	Permafrost	MLNKKGKERGNTTRASVEKEMAKPRVARSARITELSLDTARIQEQPSTTMPGTVNKIIPSPRPSQPEKAQIAVDGTDKRHRHLRIENT
Ga0182024_107458123	3300014501	Permafrost	MTHKNKKDSHNTTLASVAQEMGKPRMARSARIAELNLGTERNSEQPSGTMPGTVNKIIPSPTPTHPEKA*
Ga0182024_111115542	3300014501	Permafrost	MHTKAKKEPGSATRASVTKEMGKPRMARSAKIAELNLDTTRIPEQPRTTMPGTVDKIIPPPHLHQ
Ga0182024_119767471	3300014501	Permafrost	MLHNKIKKEPGNATRASVRKEMAKPRMAKSARVAELNLDPARIPEQPSATMPGAVDKIIPPPGPNQPEKAQSAVDGADHGHRDLRIEN
Ga0182024_126920461	3300014501	Permafrost	MITINDYNMSKAKKEPSSATRANLTKEMEKPRMAKSARIAELNLDTARIREQPSVTIPGTVHKVIPSVRAAQPDKAQ
Ga0181525_103968301	3300014654	Bog	MAKADNTTRDAVKKEMAKPRISRSARIAELSMDTSRTPADPSTSMPGTVDKIIPPRPSQPEKAQITVEGADRQHRD
Ga0181522_107573762	3300014657	Bog	MKLKTHRKESNAETHASVEKELAKPRMAKSARIAELNLDLTRIPEQPSTSMVGTVDKIIPSPRPRQPENARIAVHGPVRRNQDLRIENTLT
Ga0182030_113963982	3300014838	Bog	MLDEKEENESDIATTADVRKEMEKPRMARSARIAELNLDTTRIPEQPSVSMPGTVDKIIPSPSPSQPEQAQIGVEGADSQKQDLRIEN
Ga0157376_126914931	3300014969	Miscanthus Rhizosphere	MGHKKTKKNTDNAPLASVIKEMAKPRMTRSAKIAELRLDTTRIREQPSASATGTVDKIVTSLRLSQPEMAQIGIDLPD
Ga0167668_10850861	3300015193	Glacier Forefield Soil	MGLLGFRLDSYDGCMRRKKEPDNATHASVKKEMAKPRMAKSARTTELNLDTTRIPEQPSTTMPGTVDKIIPSPRPSQPEKAQITV
Ga0181505_108039944	3300016750	Peatland	MKHKKHRKESNAETRASVQKEMAKPRMAKSARIAELNLDIKRISERPSTTVPGTVGRIISSPRRSLPEKAQIAVDGPDH
Ga0187863_106582712	3300018034	Peatland	MSRADKELINATRASVTKEMGKPRMARSAKIAQLNLDIIRIPERPSVTMPGTVDKIIPSLGRSRPEKALIAVEGADIA
Ga0182025_12102501	3300019786	Permafrost	NGISPRLTRCHGGCMVHKTSPEKELANATRASVSKGNGEAAMSKSARIAELKLDTARIPEHPSTTMPGTVKRIISSPRPSQPEKAQIAVDRADQRIEISV
Ga0182025_13116391	3300019786	Permafrost	MLPKKTRKKTNTDITASLKKEMAMPRMARSARIAQLNLDTSRISEQPSVTIPGSVDKIIPSGRSNQPEKAQIAVDGPDRGIVISVLKIR
Ga0182028_12980834	3300019788	Fen	MEHKKTKKEPGNATRARIRKEMAKPRMASSARIAELKLDTTRIPEPPSVTLPGTVDKSSRLPHPSQPDKAQIAVRGPTTEIKISALKIR
Ga0210407_104151721	3300020579	Soil	MRYKKRKKESGDATRASVKKEMGKPRMARSARVMELKLDMTRTPEPPSTRMPGTVDRIILSGRTGQPERAQITVDLASPRHRRLRI
Ga0210403_105322271	3300020580	Soil	MPHKKGKKQPRNATRADVTKEMAKPRMARSARIAELNLDTARNIEQPSTTVAGTVKKIIPSPRTKLPEKAQI
Ga0210395_103014511	3300020582	Soil	MRHKKVKQEPRATTRSDVNKEMAKPRMARSARIAELNLDTARNIEQPSATMPGTVKKIIPSPRMNLPEKAQIT
Ga0210404_108427521	3300021088	Soil	VSKLNGKVTKETGSATRTSVETEMAKPRMTRSARIMELKLDTTRIPEQPSTSMPGTVKKIILARPPSQPEKAQIAVHGADHRHRDLRIKNT
Ga0210400_112210001	3300021170	Soil	MLHKKTKKERGNATLTSVTKEMAKPRTAKSARIAELNLESSRIREQPRITVPGVVEEIIAFP
Ga0210408_104475951	3300021178	Soil	MPKKKRKTKSGRAIRASVKKEMAKPRMARSARITELNLDTARTREQPSTTIPGTVDKIIFSPRPGQPEEAQIAVEGADRPHRDFRIEN
Ga0210396_112095011	3300021180	Soil	MQKKGKNKPGNATHASLKKEMAKPRMAKSARIAELNLDTARIPEQPSTSVPGTVDKIIPARSSQPEKAQIAVD
Ga0210396_112685631	3300021180	Soil	MLHKKNIKAPDSATHASVKRELAKPRMAKSARIAELNLDITRIPEQPSTSMPGTVDKIIPSPRPSQP
Ga0210393_105162421	3300021401	Soil	MPYKKSKKAPDDVTRASVTMEMAKPRMARSARIAEQNLDTTRIPEQPSTILSGIVHKIIPSPRPSRPEEAQISLEGADRRSRNLRIE
Ga0210385_109299631	3300021402	Soil	MAHKHASKESAKAVRASVGKEMAKPRMARSARIAERNQDTSRKAEDPSVTMPGTVDKIIS
Ga0210387_101864652	3300021405	Soil	MLHKKNRKEPDIATHASVKKELARPRMAKSARIAELNLDITRIPEQPSTSMPGTVDKIIPSPRHSQPENAQI
Ga0210383_106093621	3300021407	Soil	MLHKKTRKKTSNASLASVSWEMAKPRMARSARIAELNLDTARIPEHPSVTMPGIVKKIIPPPNPNRPEKAQIFVMGRPTASRSSV
Ga0210394_104988701	3300021420	Soil	MVHEKNRKKAGNLRFAGVNREMAKTRMARSKRIAELKLDTMRIPERASTTMPGTVKQIIPSLHPSQAEKVQI
Ga0210394_107577792	3300021420	Soil	MPQEKGKTKSGRATYASVKKELAKPRMTKSARIAELNLNTARIPEQPSTTMSGIVDKIISSRRPSQPEEPQIAGSKGSL
Ga0210384_114254281	3300021432	Soil	MTKNAKNGFNEGIFASVKREMAKPRMAKSARISELNLDSARIPEQPSTTMPGIVNKIIPSPYPSQPEKAQIAVEESDHRYRDLR
Ga0210391_114653161	3300021433	Soil	MKNKGNKEARDATRASVKNEMAKPRMARSAKIAELNLDTARISEQPSTTMPGVVDKIIPSPRTNQPEKAQIAVEGTDQRFRSL
Ga0209483_10016945	3300025862	Arctic Peat Soil	MLRKKSKKESDNSTLANVKKEMAKPRMTRSARIAELNLNTARIPEQPSVAMPGTVDKIIPPSGPNQPEKGTDCR
Ga0209483_10368711	3300025862	Arctic Peat Soil	LHKKIRKNIADPLRASVKKEMAKPRIARSARIEELNLDITRIREQPSVTLPATVNRIIPSPRPSLPEKAQ
Ga0207663_112140512	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	CTTVPNETAKLLFREQDNRILDLKKQKQLESATSASVRKEMAKPRMVRSAKIAELNLDISRIPEQPSTTMPGIVNKIIPSRHTSQPEKAQIAVNGTDQRYRNLRIVNTLTD
Ga0207686_101212444	3300025934	Miscanthus Rhizosphere	MCMLDKKVKKELDAPTHASVRKEMAKPRMARSARIAELNLDTARIPEQPSTTMLAIVDKIIPPRPSQLERAQIAVDGADHGY
Ga0207704_107997042	3300025938	Miscanthus Rhizosphere	MCMLDKKVKKELDAPTHASVRKEMAKPRMARSARIAELNLDTARIPEQPSTTMLAIVDKIIPPRPSQLERAQIAVDGADHGYRDLRIENTL
Ga0207665_116110521	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MSVRNGTVGLPARCHARCMPHKRIKKERRNPAHASVTKEMAKPRMARSARIAELNLDTTRIPEQPSTTMPGIVEKIIPSRPSQFERAQITVEGADHG
Ga0207712_108170232	3300025961	Switchgrass Rhizosphere	MRQKNAEKEPGYATRASVRTEMAKPRMARSARIAELNLDTARTPEQPSATMAGIVDKIVPSPRPGQPEPAAA
Ga0207677_114972201	3300026023	Miscanthus Rhizosphere	MCMLDKKVKKELDAPTHASVRKEMAKPRMARSARIAELNLDTARIPEQPSTTMLAIVDKIIPPRPSQLERAQIAVDGADHGYRDLRIEN
Ga0208890_10230522	3300027523	Soil	MLHKKNRKERDTTTHTSVKKEMAKPRMAKSARIAELNLDIARVPEQPSTSMPGTVDKIIPSPRPSQPEKAQIAVDGPYRL
Ga0209419_10199202	3300027537	Forest Soil	MKKNAKNEFNEETFASVKKEMAKPRMARSARLGKLNLDTARIPEPSAVIMPGTVAKIIPSPRPSQPEKAQIAVEGADHRYRNLRIENTLTDEHGDDVRLEK
Ga0209735_11229601	3300027562	Forest Soil	MLHNKDKKEPPNATRASVKKEMGKPRMAKSARIAELDLDTARISEHPSTTMPGTVDEIFPSRRPNQPEKAQIVIHGAD
Ga0209219_11405702	3300027565	Forest Soil	MLHKKGKKESGNSTRASVKKEMAKPRMARSAKIAELNLDPARIPERPSVTMPGTVDKIIPSPRPTQPEKAQIAVDGAD
Ga0209733_11642721	3300027591	Forest Soil	MRHKKRKKERGDATRASVKKEMAKPRMARSARITELNLDTARIPEQPSTTMPGTVDKIIPPRQGKPEKAQIAVDGA
Ga0209329_10501141	3300027605	Forest Soil	MLHKKSKKEHGNAILTSITKEMAKPRMAKSARIMELILDTTRIPRLPSTTMPRTVDKIIPSPHQSQPEATDRRRLTERARA
Ga0209528_11287362	3300027610	Forest Soil	MLHKKANKENDAIRASVKKEMAKPRMARSARIAEMNLDSARIPEQPRTSLPGTVDKIIPSLRPSQPEKAQIAV
Ga0209117_11338931	3300027645	Forest Soil	MRHKKETKQLSDATRASVKKEMAQPRMAKSARITALNLDAARIPEPPATAMSGTVDKIIPPRPRQPEKAQIALDGADRGHRNLRIE
Ga0209908_100615341	3300027745	Thawing Permafrost	MLRKRTKKESDTATRASVTNEMAKPRMARSARVAERNLDTARILEQPSATMPGTVDKIIPSPRPSQPEKAQITVEGADPRYRDFRIENTLTVKMVTM
Ga0209274_101540331	3300027853	Soil	RCHYHRMPHNKSKKERRNATRADVNEEMAKPRMARSARIAELNLDTARNIEPPSTTMPGTVKKIIPSLRANLPEKAQIAVAGAPARIEISASKIR
Ga0209006_100230781	3300027908	Forest Soil	MLHKKTGEKIGNATRASVKKEMARPRMARSARIAELKLDTARITERPSTTMPGTVKKIIPSPRPSQPEKAQIAVDGADHRHRD
Ga0209168_100043391	3300027986	Surface Soil	MRHPKINKQRGKATLASLTKEMAMPRIARSARIAELNLDSSRIVEPPSVTMPGTVDKIIP
Ga0209526_102322041	3300028047	Forest Soil	VRNATRASVKKEMAKPRMAKSARIAELNLDTARTHEHPSTSMPGTVDKVIPSRRPNRPEKAQIAVDEADHGYRDSASKIH
Ga0209526_109799931	3300028047	Forest Soil	MGLRRPFLDVRKCMLHKKTRKKTSNASLASVSWEMAKPRMARSARIAELNLDTARIPEHPSVTMPGIVKKIIPPPNPNRPEKAQIFVMGRPTASRSSV
Ga0302233_101477171	3300028746	Palsa	MTHKKANMESNKATRASVTEEMAKPRMARSARIAELNLDTSRISEEPSVTMPGTVDKIIPSPRPSQPERAQVAVDGA
Ga0302219_100412092	3300028747	Palsa	MLRKRTKKESDTATRASVTNEMAKPRMARSARVAERNLDTARILEQPSATMPGTVDKIIPSPRPSQPEKAQITVEGADPRYRDLRIENTLTVKMVTM
Ga0302224_104750541	3300028759	Palsa	MLHKKTKKNTDDASRASVKLEMAKPRMARSARIAELNLETARIRERPSVSMPGTVDKVIPPPRPTRPEKAQIAVEGE
Ga0302224_104842031	3300028759	Palsa	MTHKKANMESNKATRASVTEEMAKPRMARSARIAAVNLDTSRISEEPSVTMPGTVDKIIPSPRPSQPERAQVAVDGA
Ga0302231_101770313	3300028775	Palsa	MPHKKRKTQSGAAARDSVIREIAKPRMARSARIAEQKLNSARIPQRPSVSMPGTVDKIIPPPHPRQPEKAQIAVDGAHRPHQNLRIDNDLLDE
Ga0302225_101816931	3300028780	Palsa	MRKRKGERAFVRTTLASVLKEMAKPRTSKSARIKELKLDTARIPEQQPSTSVPGTVDKIIPPRPSQPEKAQIAVDGVGQRYRDFRIENALTDE
Ga0302225_102523891	3300028780	Palsa	MRHKKANMESNKATRANVTEEMAKPRMARSARIAELNLDTSRISEEPSVTMPGTVDKIIPSPRPSQPERAQVAVDGADRRYRDLRIENTS
Ga0302232_106302671	3300028789	Palsa	MAKADNTTRDAVKKEMAKPRISRSARIAELSMDTSRTPADPSTSMPGTVDKIIPPRPSQPEKAQITVEGADRQHRDLRIENILL
Ga0265338_101607734	3300028800	Rhizosphere	MLRKKIQKEHDDAAYAGIKKEMAKPRMARSARIAELNLETTRISERPSTTMPGTVDRIIPSSRRSIPEKARIAVDGSNRRNQDLR
Ga0265338_110179281	3300028800	Rhizosphere	MLKKVRKTISKSTHASVKREMAKPRTTKSARIAERNLDSTRISEQPSVTMPGTVDQIIQSPRPSQPEKAHIAVDGADRRYR
Ga0302221_103048012	3300028806	Palsa	MPHKKKKSESARETHANKAIHASTAAEMAKPRMARSARIAELNLDRARIAEQPSVTLPGTVAKIISSPRP
Ga0311368_107433131	3300029882	Palsa	MRHKKANMESNKATRANVTEEMAKPRMARSARIAELNLDTSRISEEPSVTMPGTV
Ga0311369_109550032	3300029910	Palsa	MTHKKANMESNKATRASVTEEMAKPRMARSARIAAVNLDTSRISEEPSVTMPGTVDKIIPSPRP
Ga0311340_103870731	3300029943	Palsa	MLHKKTKKTPSDSTRASVKKEMTKPRMARSATIAERNLDTARIPEQSSTTLPGTVDKIIPASHSSQSERAQIAVEGADRRFRDLRIENI
Ga0302304_102666901	3300029993	Palsa	LLPSRSHDGGVLNKKGKKPANATRANVEKEMAKPRMSKSARITELNLNTARIVEHPSTTVPGTVNKIIPSPRKSQPEKAQIAVD
Ga0311339_100876651	3300029999	Palsa	MLHKKADKESDKATRASVTKEMARPRMARSARIMELNLDTTRTRERPSTTMPGTVDKIIVSPGQPQKANIAVDGADHRYRD
Ga0311339_117420961	3300029999	Palsa	MLRKRATKESGQATRASVTKEMAKPRMTRSARIAELNLDAARTPEQPRASLPGTVDKIIPPPSPS
Ga0311338_104859273	3300030007	Palsa	MLLARCNHESMRHKKRKTLSGAAARASVIREIAKPRMARSARIAQQKLDLARTAVHPSVSMPGTVDKIIPPPRPRQPEKAQIAVDGAHR
Ga0302176_101405932	3300030057	Palsa	MLHKKTKKTPSDSTRASVKKEMTKPRMARSATIAERNLDTARIPEQSSTTLPGTVDKIIPASHSSQSERAQIAVEGADRRFRDLRIENIL
Ga0311353_106593221	3300030399	Palsa	MLHKKAMKESDTATRASVTKEMARPRMARSARIMQLNLDTTRTRERPSTTMPGTVDKIIVSRGADRPEKANIAVDGADHRHR
Ga0311372_123641992	3300030520	Palsa	MPNKKRKKDSGKATRASVEKEMGKPRMARSARIKEMSLDTRRVSERPSTTVDGRVNKIIPSPRPSKPEKA
Ga0311357_112614722	3300030524	Palsa	MLLARCNHESMRHKKRKTLSGAAARASVIREIAKPRMARSARIAQQKLDLARTAVHPSVSMPGTVDKIIPPPRPRQPEKAQIAVDGAHRP
Ga0265753_11069552	3300030862	Soil	MRHKKPKKALVDATRASVKKEMARPRNARSARIAELKLDTARISERPSTTMSGTVDKIIPSLRPSQPEQANIRVDVPDKRYRDLRIV
Ga0170824_1035089401	3300031231	Forest Soil	MLHKKRKKEADNATQASVKREMAKPRMARSARMAELNLDTAIPDQPGATIGTVDKIIPFPRSSPPERAQIAGSLIGRPVRFRADFYTT
Ga0302325_127821251	3300031234	Palsa	MLHKKTKEELGNATRASVDKEMAKPRMARSAKIAELNLDTSRIPEQPSATVPGTVDKIIPSSRPSQ
Ga0302324_1023130891	3300031236	Palsa	MLNKKIKKETSNTTRAGVEKEMAKPRMARSARIAALNLDTSRIPEQPSATMPGTVDKIIPSQSSNHPEKAQIAVNGADQGHRDLRIE
Ga0302324_1029216251	3300031236	Palsa	MHKKAKEDATRASVTKEMAKPRMARSAKIAELNLDTTRVPGQPSTTMPGTVNKIIPSQRPTQPEKAQIAVGGAD
Ga0265325_100848015	3300031241	Rhizosphere	MLDKKREKESDSAITAGVRKEMEKPRMARSAKIAELNLDTTRIPEQPSVSMPGTVDKIIPSPSPSQPEQAQIG
Ga0265325_101128352	3300031241	Rhizosphere	MSNTKKELNNATSASVRKEMEKPRMSRSARIAELNLDTARIREQPSVTMPGTVDKIIPSSHLSQREKAQIGVDGADHQYRNLRIAN
Ga0265340_101212841	3300031247	Rhizosphere	MPHKKVPRDTTRASVEKEMAQPRMARSARIAEQNLDTARVPDQPSTTMPGTVDKIIPPRPNRPEKVQIAVDGADHRH
Ga0265331_105519961	3300031250	Rhizosphere	MSNTKKELNNATSASVRKEMEKPRMSRSARIAELNLDTARIREQPSVTMPGTVDKIIPSSHLSQREKAQIGVDGADHQYRNLRIANNLTD
Ga0302326_114813842	3300031525	Palsa	MLHKKTKEELGNATRASVDKEMAKPRMARSAKIAELNLDTSRIPEQPSATVPGTVDKIIPSSRPSQPEKA
Ga0310686_1039076021	3300031708	Soil	MTRASVTKEMAKPRMARSARIAELNLDTTRIPEQPSTILSAIVDKIIPSPRPSQPEKAQISLEGADRPVSKYRIENTLT
Ga0310686_1143396944	3300031708	Soil	MKKKTKEELAETTRADVRKEMAKPRMARSARIAELNRDAARNPEQPSTTVPGTVEKIIPSPVANQPEKAQIAVNGAVRPYRDLRIEN
Ga0310686_1169617601	3300031708	Soil	MPHKKGKKEPRNAIRADVTKEMAKPRMARSARIAELNLDTARNIEQPSTTMPGTVKRIIPSPRTKLPEEAQIAIAGAPRPYRDIRIENT
Ga0307475_104822261	3300031754	Hardwood Forest Soil	MLHKKSNEESDNAIRARVKKEMAEPRMAKSVRIAQWNLNAARIPEQPGTTMPGTVAKIIPPRLGQPEKAQIAIDGAGHRHRDFRIENTLTD
Ga0307478_113720361	3300031823	Hardwood Forest Soil	MLHKKSNEESDNAIRARVKKEMAEPRMAKSVRIAQLNLNTWRNPEQPGTTMPGTVAKIIPPRPGQPEKAQIAID
Ga0302315_103409531	3300031837	Palsa	VRNGTAFFPSRDHDVYMLHKKTKRESDTATRASVTNEMAKPRMARSARVAERNLDTARILEQPSATMPGTVDKIIPSPRPSQPEKAQITVEGADPRYRDLRIENTLTVKMVTM
Ga0307479_105960041	3300031962	Hardwood Forest Soil	MLHKKSRKKIGNVTRASVTKEMAKPRMARSARIAELKLDTARIPEQPSTTMPGTVKKIIPSPCPSQPERVQIAVDGGDRR
Ga0315742_135921381	3300032756	Forest Soil	MLHKKTRKKTGNASYSSVHKEMAKPRMARSARIAELKLATARIPEHPRTTMPGSVKRIIPSPRPSQPEKAQIEH

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041890

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign