Metagenome / Metatranscriptome Family F041942

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F041942
Family Type	Metagenome / Metatranscriptome
Number of Sequences	159
Average Sequence Length	61 residues
Representative Sequence	MSDTEQREIAETLFPSQTHEEIRDAIKLEEERRAALVKNLYRLRALRLSRDRGSIRI
Number of Associated Samples	106
Number of Associated Scaffolds	159

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	54.43 %
% of genes near scaffold ends (potentially truncated)	29.56 %
% of genes from short scaffolds (< 2000 bps)	81.13 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (85.535 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.239 % of family members)
Environment Ontology (ENVO)	Unclassified (35.220 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.233 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.82% β-sheet: 0.00% Coil/Unstructured: 41.18%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 159 Family Scaffolds
PF11752	DUF3309	16.35
PF12244	DUF3606	5.03
PF04392	ABC_sub_bind	4.40
PF00128	Alpha-amylase	4.40
PF00583	Acetyltransf_1	2.52
PF07690	MFS_1	1.89
PF00072	Response_reg	1.26
PF02069	Metallothio_Pro	1.26
PF03401	TctC	0.63
PF00719	Pyrophosphatase	0.63
PF00196	GerE	0.63
PF13426	PAS_9	0.63
PF01329	Pterin_4a	0.63
PF00034	Cytochrom_C	0.63
PF01738	DLH	0.63
PF06071	YchF-GTPase_C	0.63
PF01494	FAD_binding_3	0.63
PF06724	DUF1206	0.63
PF01566	Nramp	0.63
PF07536	HWE_HK	0.63
PF05974	DUF892	0.63
PF04115	Ureidogly_lyase	0.63
PF01594	AI-2E_transport	0.63
PF06233	Usg	0.63
PF04909	Amidohydro_2	0.63
PF13577	SnoaL_4	0.63
PF07885	Ion_trans_2	0.63
PF13534	Fer4_17	0.63

COG ID	Name	Functional Category	% Frequency in 159 Family Scaffolds
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	4.40
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	4.40
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	4.40
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	4.40
COG3280	Maltooligosyltrehalose synthase	Carbohydrate transport and metabolism [G]	4.40
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.26
COG0012	Ribosome-binding ATPase YchF, GTP1/OBG family	Translation, ribosomal structure and biogenesis [J]	0.63
COG0221	Inorganic pyrophosphatase	Energy production and conversion [C]	0.63
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.63
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.63
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.63
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.63
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	0.63
COG2154	Pterin-4a-carbinolamine dehydratase	Coenzyme transport and metabolism [H]	0.63
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.63
COG3194	Ureidoglycolate hydrolase (allantoin degradation)	Nucleotide transport and metabolism [F]	0.63
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	0.63
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	0.63
COG4251	Bacteriophytochrome (light-regulated signal transduction histidine kinase)	Signal transduction mechanisms [T]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.53 %
Unclassified	root	N/A	14.47 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.53 %
Unclassified	root	N/A	14.47 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.53 %
Unclassified	root	N/A	14.47 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	66.67 %
Unclassified	root	N/A	14.47 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	61.01 %
Unclassified	root	N/A	14.47 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	18.87 %
Unclassified	root	N/A	14.47 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	9.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.47 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	11.32 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.43 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.63 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.47 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.43 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.40 %
Variibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter	1.89 %
Methylovirgula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula	0.63 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.63 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.47 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.43 %
Variibacter gotjawalensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	1.89 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.26 %
unclassified Hyphomicrobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium	0.63 %
Methylovirgula ligni	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni	0.63 %
Rhodopseudomonas boonkerdii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas boonkerdii	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.47 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.43 %
Variibacter gotjawalensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	1.89 %
Bradyrhizobium sp. S69	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. S69	0.63 %
Hyphomicrobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp.	0.63 %
Bradyrhizobium sp. CCGUVB23	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB23	0.63 %
Methylovirgula ligni	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni	0.63 %
Rhodopseudomonas boonkerdii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas boonkerdii	0.63 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004152\|Ga0062386_100068477	Not Available	2695	Open in IMG/M
3300005332\|Ga0066388_100033492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4899	Open in IMG/M
3300005332\|Ga0066388_100203568	All Organisms → cellular organisms → Bacteria	2601	Open in IMG/M
3300005332\|Ga0066388_100446139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1936	Open in IMG/M
3300005332\|Ga0066388_101319889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	1246	Open in IMG/M
3300005332\|Ga0066388_103758798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	775	Open in IMG/M
3300005332\|Ga0066388_106142079	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300005332\|Ga0066388_106282393	Not Available	599	Open in IMG/M
3300005332\|Ga0066388_108846291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	500	Open in IMG/M
3300005434\|Ga0070709_10316494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1144	Open in IMG/M
3300005436\|Ga0070713_101002237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	806	Open in IMG/M
3300005437\|Ga0070710_11293930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	542	Open in IMG/M
3300005451\|Ga0066681_10495697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	753	Open in IMG/M
3300005454\|Ga0066687_10370662	All Organisms → cellular organisms → Bacteria → Proteobacteria	823	Open in IMG/M
3300005534\|Ga0070735_10171057	All Organisms → cellular organisms → Bacteria	1340	Open in IMG/M
3300005764\|Ga0066903_101337585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1341	Open in IMG/M
3300005764\|Ga0066903_101987213	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300005764\|Ga0066903_102326724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1035	Open in IMG/M
3300005764\|Ga0066903_104409643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	751	Open in IMG/M
3300005764\|Ga0066903_104477750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	745	Open in IMG/M
3300005764\|Ga0066903_104703070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	727	Open in IMG/M
3300005764\|Ga0066903_106285014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	620	Open in IMG/M
3300005764\|Ga0066903_106376329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	615	Open in IMG/M
3300005764\|Ga0066903_108315756	Not Available	530	Open in IMG/M
3300005764\|Ga0066903_108336699	Not Available	529	Open in IMG/M
3300006047\|Ga0075024_100061438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas boonkerdii	1586	Open in IMG/M
3300006059\|Ga0075017_100568182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	865	Open in IMG/M
3300006102\|Ga0075015_100647447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	623	Open in IMG/M
3300006174\|Ga0075014_100020386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2530	Open in IMG/M
3300006755\|Ga0079222_11699492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	605	Open in IMG/M
3300006797\|Ga0066659_10613175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	884	Open in IMG/M
3300006800\|Ga0066660_10456642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1068	Open in IMG/M
3300006804\|Ga0079221_11031155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	621	Open in IMG/M
3300006893\|Ga0073928_10013297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9255	Open in IMG/M
3300009792\|Ga0126374_10980082	Not Available	661	Open in IMG/M
3300009792\|Ga0126374_11584110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	540	Open in IMG/M
3300010048\|Ga0126373_10092757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2777	Open in IMG/M
3300010048\|Ga0126373_10434278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1345	Open in IMG/M
3300010048\|Ga0126373_10959487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	920	Open in IMG/M
3300010048\|Ga0126373_12533554	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300010154\|Ga0127503_10957517	Not Available	555	Open in IMG/M
3300010358\|Ga0126370_10023891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3565	Open in IMG/M
3300010358\|Ga0126370_10236785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1406	Open in IMG/M
3300010358\|Ga0126370_10594269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	954	Open in IMG/M
3300010359\|Ga0126376_10117967	All Organisms → cellular organisms → Bacteria	2064	Open in IMG/M
3300010359\|Ga0126376_11058708	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300010360\|Ga0126372_10046552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2895	Open in IMG/M
3300010360\|Ga0126372_10238274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1550	Open in IMG/M
3300010360\|Ga0126372_10718839	Not Available	978	Open in IMG/M
3300010361\|Ga0126378_10925218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	978	Open in IMG/M
3300010366\|Ga0126379_10331393	All Organisms → cellular organisms → Bacteria	1543	Open in IMG/M
3300010366\|Ga0126379_11027049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	929	Open in IMG/M
3300010376\|Ga0126381_100473232	All Organisms → cellular organisms → Bacteria	1761	Open in IMG/M
3300010396\|Ga0134126_12314139	Not Available	585	Open in IMG/M
3300010398\|Ga0126383_11956083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	674	Open in IMG/M
3300010863\|Ga0124850_1000615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	8299	Open in IMG/M
3300012201\|Ga0137365_10617691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	794	Open in IMG/M
3300012209\|Ga0137379_10574521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1034	Open in IMG/M
3300012285\|Ga0137370_10939696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	534	Open in IMG/M
3300012677\|Ga0153928_1028031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1214	Open in IMG/M
3300012948\|Ga0126375_11083908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	659	Open in IMG/M
3300012971\|Ga0126369_10092651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2713	Open in IMG/M
3300015371\|Ga0132258_10146751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5652	Open in IMG/M
3300016270\|Ga0182036_10571622	Not Available	903	Open in IMG/M
3300016294\|Ga0182041_10289636	All Organisms → cellular organisms → Bacteria	1352	Open in IMG/M
3300016319\|Ga0182033_11675518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	576	Open in IMG/M
3300016319\|Ga0182033_11837254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	550	Open in IMG/M
3300016341\|Ga0182035_11253063	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300016341\|Ga0182035_11917149	Not Available	538	Open in IMG/M
3300016357\|Ga0182032_10108339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1978	Open in IMG/M
3300016357\|Ga0182032_10513641	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300016371\|Ga0182034_10639847	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300016387\|Ga0182040_10378610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1105	Open in IMG/M
3300017822\|Ga0187802_10000151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	15880	Open in IMG/M
3300017822\|Ga0187802_10217132	Not Available	737	Open in IMG/M
3300017927\|Ga0187824_10085206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1005	Open in IMG/M
3300017927\|Ga0187824_10162825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	745	Open in IMG/M
3300017927\|Ga0187824_10164556	Not Available	741	Open in IMG/M
3300017933\|Ga0187801_10403837	Not Available	568	Open in IMG/M
3300017937\|Ga0187809_10441422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	502	Open in IMG/M
3300017970\|Ga0187783_10053660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB23	2973	Open in IMG/M
3300017993\|Ga0187823_10019938	Not Available	1679	Open in IMG/M
3300018006\|Ga0187804_10252430	Not Available	761	Open in IMG/M
3300019888\|Ga0193751_1008154	All Organisms → cellular organisms → Bacteria	5645	Open in IMG/M
3300020581\|Ga0210399_10014176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6274	Open in IMG/M
3300021420\|Ga0210394_10755843	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300021560\|Ga0126371_10106056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2808	Open in IMG/M
3300021560\|Ga0126371_11556756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	788	Open in IMG/M
3300021560\|Ga0126371_12964916	Not Available	575	Open in IMG/M
3300025906\|Ga0207699_10994887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	620	Open in IMG/M
3300025906\|Ga0207699_11090873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	591	Open in IMG/M
3300025928\|Ga0207700_10553631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1021	Open in IMG/M
3300026330\|Ga0209473_1180509	Not Available	821	Open in IMG/M
3300027070\|Ga0208365_1039172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	631	Open in IMG/M
3300027787\|Ga0209074_10201039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	748	Open in IMG/M
3300027824\|Ga0209040_10159103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1211	Open in IMG/M
3300027874\|Ga0209465_10067687	All Organisms → cellular organisms → Bacteria	1728	Open in IMG/M
3300030916\|Ga0075386_11610139	Not Available	638	Open in IMG/M
3300031057\|Ga0170834_102605920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	559	Open in IMG/M
3300031057\|Ga0170834_110435592	Not Available	703	Open in IMG/M
3300031128\|Ga0170823_11578442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	794	Open in IMG/M
3300031231\|Ga0170824_106931126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1397	Open in IMG/M
3300031231\|Ga0170824_113022377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni	2010	Open in IMG/M
3300031231\|Ga0170824_115922788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1584	Open in IMG/M
3300031231\|Ga0170824_125310505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2070	Open in IMG/M
3300031474\|Ga0170818_105169352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	585	Open in IMG/M
3300031545\|Ga0318541_10035952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2485	Open in IMG/M
3300031546\|Ga0318538_10631188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	581	Open in IMG/M
3300031573\|Ga0310915_10061138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2458	Open in IMG/M
3300031573\|Ga0310915_10461600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	902	Open in IMG/M
3300031680\|Ga0318574_10397590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	805	Open in IMG/M
3300031718\|Ga0307474_10634375	All Organisms → cellular organisms → Bacteria → Proteobacteria	843	Open in IMG/M
3300031718\|Ga0307474_11226478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. S69	593	Open in IMG/M
3300031719\|Ga0306917_10091872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2159	Open in IMG/M
3300031736\|Ga0318501_10553255	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300031744\|Ga0306918_10030907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3383	Open in IMG/M
3300031744\|Ga0306918_10118737	All Organisms → cellular organisms → Bacteria → Proteobacteria	1913	Open in IMG/M
3300031753\|Ga0307477_10014211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5432	Open in IMG/M
3300031754\|Ga0307475_11046467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	640	Open in IMG/M
3300031764\|Ga0318535_10366333	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300031768\|Ga0318509_10194326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1128	Open in IMG/M
3300031768\|Ga0318509_10393551	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300031770\|Ga0318521_10844208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	559	Open in IMG/M
3300031771\|Ga0318546_10680210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	724	Open in IMG/M
3300031782\|Ga0318552_10485280	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300031823\|Ga0307478_11209413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp.	629	Open in IMG/M
3300031833\|Ga0310917_10470152	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300031879\|Ga0306919_10232334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1382	Open in IMG/M
3300031879\|Ga0306919_10438949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1004	Open in IMG/M
3300031880\|Ga0318544_10160540	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300031890\|Ga0306925_10312968	Not Available	1688	Open in IMG/M
3300031890\|Ga0306925_10354103	All Organisms → cellular organisms → Bacteria → Proteobacteria	1576	Open in IMG/M
3300031890\|Ga0306925_11039280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	832	Open in IMG/M
3300031897\|Ga0318520_10655573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	654	Open in IMG/M
3300031910\|Ga0306923_10225117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2145	Open in IMG/M
3300031910\|Ga0306923_11227393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	800	Open in IMG/M
3300031912\|Ga0306921_10475154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1455	Open in IMG/M
3300031941\|Ga0310912_10238137	All Organisms → cellular organisms → Bacteria → Proteobacteria	1398	Open in IMG/M
3300031947\|Ga0310909_11074046	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300031954\|Ga0306926_10293814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2011	Open in IMG/M
3300031954\|Ga0306926_12886179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	517	Open in IMG/M
3300031959\|Ga0318530_10090997	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300031981\|Ga0318531_10299471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	727	Open in IMG/M
3300032001\|Ga0306922_10092059	All Organisms → cellular organisms → Bacteria → Proteobacteria	3196	Open in IMG/M
3300032001\|Ga0306922_10247001	Not Available	1918	Open in IMG/M
3300032001\|Ga0306922_11833974	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300032001\|Ga0306922_12093961	Not Available	548	Open in IMG/M
3300032041\|Ga0318549_10514570	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300032052\|Ga0318506_10176932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	939	Open in IMG/M
3300032059\|Ga0318533_11456662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	500	Open in IMG/M
3300032076\|Ga0306924_10034711	All Organisms → cellular organisms → Bacteria → Proteobacteria	5504	Open in IMG/M
3300032090\|Ga0318518_10091018	All Organisms → cellular organisms → Bacteria	1513	Open in IMG/M
3300032180\|Ga0307471_100426012	All Organisms → cellular organisms → Bacteria	1461	Open in IMG/M
3300032180\|Ga0307471_100429796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1455	Open in IMG/M
3300032261\|Ga0306920_104062117	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300032515\|Ga0348332_13592147	All Organisms → cellular organisms → Bacteria	1089	Open in IMG/M
3300033289\|Ga0310914_10096493	All Organisms → cellular organisms → Bacteria → Proteobacteria	2536	Open in IMG/M
3300033289\|Ga0310914_10247192	All Organisms → cellular organisms → Bacteria → Proteobacteria	1602	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.74%
Host-Associated	Host-Associated	1.26%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.05%
Aquatic	Environmental → Aquatic	10.69%
Plants	Host-Associated → Plants	0.63%
Fungi	Host-Associated → Fungi	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.42%
Freshwater	Environmental → Aquatic → Freshwater	7.55%
Sediment	Environmental → Aquatic → Sediment	2.52%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.63%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.63%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.63%
Mycelium	Host-Associated → Fungi → Mycelium	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.81%
Loam	Environmental → Terrestrial → Soil → Loam	16.98%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.52%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.63%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.63%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.63%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.63%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	45.91%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.21%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.77%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.52%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.89%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.26%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.63%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.63%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.63%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.63%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.24%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.58%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.66%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.03%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.40%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.14%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.52%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.89%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.26%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.63%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.63%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.63%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.63%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.63%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.63%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.63%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012677	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ012 MetaG	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062386_1000684772	3300004152	Bog Forest Soil	MSDTEQCEIAETLFPSQTREKIRDAIKLEEERRAALVKNLYRLRALRLSRDRGSMRIQEG
Ga0066388_1000334921	3300005332	Tropical Forest Soil	MSEAEQREVAETLFEQRREEIRDAIMLEEERRAALVKNLYRLRALRLSRDRSRMRIK
Ga0066388_1002035682	3300005332	Tropical Forest Soil	MVEAEQREIAETLFEQTREEIRDAIKLEEERRATLVKNLYRLRALRLSRDRNRMRVEEARSQRR*
Ga0066388_1004461393	3300005332	Tropical Forest Soil	MANAMSETGQREIAESLFEQTREEIRDGIKLEEERRAALVKNLYRLKALRLSRDRNRMQIEEGSQHR*
Ga0066388_1013198892	3300005332	Tropical Forest Soil	MPEPAQREIAETLFQPTREEIRDAIKLEEERRATLVKDLYRLRALRLSRDRNRSRIEEDQSYRR*
Ga0066388_1037587981	3300005332	Tropical Forest Soil	MFDTEQREIAETLFPSQAHEEIRDAMKLEEERRAVLIKNLYRLRALRLSRDRRGM
Ga0066388_1061420791	3300005332	Tropical Forest Soil	ETLFPSQTREEIRDAIKLEEERRAVLIKNLYRLKALRLSRDRASVANR*
Ga0066388_1062823931	3300005332	Tropical Forest Soil	VGCTVDAMTEAEQRKIAETLFAQTREEIRDAIKLEEERRAALVKNVYRLRALRLSRVRDSYALSRRA*
Ga0066388_1088462911	3300005332	Tropical Forest Soil	MSDTEQREIAETLFPSQTREEIRDAIKLEEERRAALVKNLYRLRALRLLRDRGSMRIQEGSDQCR*
Ga0070709_103164943	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MADAMSDEQSQTAETLFEQTRREITDAIKLEEERRAALVKNLYRLRALRLSRERGGVGFHHQG*
Ga0070713_1010022371	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MADAMSDEQSQTAETLFEQTRREITDAIKLEEERRAALVKNLYRLRALRLSRERGGVGIPHQN*
Ga0070710_112939301	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSDTEQREIAKTFIEPRQAHEEIRDALKLEEERRTALVKNLYRLRALRLSRGQGGLRIQER*
Ga0066681_104956971	3300005451	Soil	MSDTEQREIAETVFEPSQTREEIRDAIRLEEERRTALVKNLYRLRALRLSRDRSSMRFQEG*
Ga0066687_103706621	3300005454	Soil	MSDTEQREIAQTLFEPSQTREEIRDAIKLEEERRATLVKNLYRLKALRLSRDRGGVRIQER*
Ga0070735_101710571	3300005534	Surface Soil	VDAMSDVEQRENAKSLFGQTREEIKDAIKLEEERRAVLVKNLYRLRALRVSRDRGDVDF*
Ga0066903_1013375852	3300005764	Tropical Forest Soil	MIEAEQRKIAETLFAQRREEIRDAIKLEEERRAALVKNLYRLRALRLSQVRDSMRFHEGRS*
Ga0066903_1019872132	3300005764	Tropical Forest Soil	MSQAQEREIAEAIFEPTREEIKDAIRLEEERRAALVKNLYRLRTLRLARDQGGMPIQG*
Ga0066903_1023267242	3300005764	Tropical Forest Soil	MSDTLQREFAETLFPSPTHEEIRDAIKLEDERRAVLIKNLYRLRALRLSRDRASVLER*
Ga0066903_1044096432	3300005764	Tropical Forest Soil	MSDTLQREIAENLFPGQTHEEVRDAIKLEEERRAVLIKNLYRLRALRLSRDRASVLVR*
Ga0066903_1044777502	3300005764	Tropical Forest Soil	MPEPAQREIAETLFQPTREEIRDAIKLEEERRATLVKNLYRLRALRLSRDRNRSRIEEDQSYRR*
Ga0066903_1047030701	3300005764	Tropical Forest Soil	MSDTEQREIAETLFEQTHEEIKDAIKLEDERRAALVKNLYRLRALRLSRARDGMRFHEGRS*
Ga0066903_1062850142	3300005764	Tropical Forest Soil	MSDTEQREIAEALFPSQTREEVRDAIKLEEERRAVLVKNLYRLRTLRRSRDRDSIRIQEGSDQRR*
Ga0066903_1063763291	3300005764	Tropical Forest Soil	MSEAEQREVAETLFEQRREEIRDAIMLEEERRAALVKNLYRLRALRLSRDRSRMRIKEARSQHR*
Ga0066903_1083157561	3300005764	Tropical Forest Soil	DERMRMSDAEQREIAETLFERGQGRQEIKDAIKLEEERRAVLIKNLYRLRALRLSRERLANQR*
Ga0066903_1083366992	3300005764	Tropical Forest Soil	SVGCTVDAMTEAEQRKIAETLFAQTREEIRDAIKLEEERRAALVENLYRLRALRLSRARDSMRFHEGRS*
Ga0075024_1000614382	3300006047	Watersheds	MSDTEQREIAKTFIEPRQAREEIRDVLKLEEERRATLVKNLYRLRALRLSRGQGGMRIQER*
Ga0075017_1005681821	3300006059	Watersheds	MSDTEQREIAETLFVPSQTCEEIRDAIKLEEERRAALIKNLYRLRGLRLSRDRGGMRIQEG*
Ga0075015_1006474472	3300006102	Watersheds	MSDTEQREIAETLFEPSQTREEIRDAIKLEEERRAALVKNLYRLRDLRLSRGRGSVRIQEG*
Ga0075014_1000203862	3300006174	Watersheds	MSDTEQREIAVALFSASKLEEERRAALVKNLYRLRDLRLSRGRGSVRIQEG*
Ga0079222_116994921	3300006755	Agricultural Soil	MPEPAQREIAETLFEPMREEIRDAIKLEEERRATLVKNLYRLRALRLSRDRNRSRIGEDQSYRR*
Ga0066659_106131752	3300006797	Soil	MSDTQQREIAQTLFEPSQTREEIRDAIKLEEEKRATLVKNLYRLRALRLSRGRGSMRIQEG*
Ga0066660_104566422	3300006800	Soil	MSDTEQREIAQTLFEPSQTREEIRDAIKLEEEKRIALVKNLYRLRALRLSRDRSIMRIPGR*
Ga0079221_110311552	3300006804	Agricultural Soil	MSGTEQREIAETLFEPSQAREQIRDAIKLEEERRLALVKNLYRLRDLRLSRDRGSMPIQEG*
Ga0073928_100132976	3300006893	Iron-Sulfur Acid Spring	MSDTEQREIAQTLFEPSQTREEIWDAIKLEEERRATLVKNLYRLRALRLSRGRGSMRVQEG*
Ga0126374_109800822	3300009792	Tropical Forest Soil	MTEAEQRKIAETLFAQTREEIRDAIKLEEERRAALVKNLYRLRALRLSQVRDSMRFHEGRS*
Ga0126374_115841102	3300009792	Tropical Forest Soil	MSEAQQREIAETIFEPTREEIKDAIKLEEERRAALVKNLYRLRALRLSRDRRGMRIQEGLGQGR*
Ga0126373_100927574	3300010048	Tropical Forest Soil	MSETGQREIAESLFEQTREEIRDGIKLEEERRAALVKNLYRLKALRLSRDRNRMQIEEGSQHR*
Ga0126373_104342781	3300010048	Tropical Forest Soil	MANSMSKAEQREIAEIPFERTREEIRDAIRLEEERRAALVKNLYRLKALRLSRDQNKVLIQEG*
Ga0126373_109594872	3300010048	Tropical Forest Soil	MSDTEQREIAEALFPSQTREEVRDAIKLEEERRAVLVKNLYRLRTLRLSRDRDSIRIQEGSDQRR*
Ga0126373_125335541	3300010048	Tropical Forest Soil	NAKSPMSETQQREIAETLFPSQTREEIRDAIKLEEERRAVLIKNLYRLKALRLSRDRASVADR*
Ga0127503_109575172	3300010154	Soil	MQSNIMSDAEQHETAERLFQRDQNREEIKETIKLEEERRAAIVKNLYRLRALRL*
Ga0126370_100238913	3300010358	Tropical Forest Soil	MSEAQQRDIAETIFEPTREEIKDAIKLEEERRAALVKNLYRLRALRLSRDRRGMRIQEGLGQGR*
Ga0126370_102367853	3300010358	Tropical Forest Soil	MSEAEQREVAETFFEQRREEIRDAIMLEEERRAALVKNLYRLRTLRLSRGRSRMRIKEARSQHR*
Ga0126370_105942691	3300010358	Tropical Forest Soil	MSETQQREIAETLFPSQTREEIRDAIKLEEERRAVLIKNLYRLKALRLSRDGASVADR*
Ga0126376_101179673	3300010359	Tropical Forest Soil	MSEAQQRDIAETIFEPTREEIKDAIKLEEERRAALVKNLYRLRALRLSRDRRGMRIQEGSGQGR*
Ga0126376_110587082	3300010359	Tropical Forest Soil	MVEAEQREIAETLFEQTREEIRDAIKLEEERRAALVKNLYRLRALRLSRDRNRMRVEEARSQRR*
Ga0126372_100465522	3300010360	Tropical Forest Soil	MSEAQQREIAETIFEPTREEIKDAIKLEEERRAALVKNLYRLRALRLSRDRRGMRIQEGSGQGR*
Ga0126372_102382742	3300010360	Tropical Forest Soil	MSEAEQREVAETLFEQRREEIRDAIMLEEERRAALVKKLYRLRALRLSRDRSRMRIKEAISQHR*
Ga0126372_107188392	3300010360	Tropical Forest Soil	MTEAEQRKIAETLFAQTREEIRDAIKLEEERRAALVKNLYRLRALRLSQVRDSMRFHEGR
Ga0126378_109252181	3300010361	Tropical Forest Soil	MTEAEQRKIAERLFAQTREEIRDAIKLEEERRAALVKNLYRLRALRLSRVRDSYALSRRA
Ga0126379_103313931	3300010366	Tropical Forest Soil	MSETQQREIAETLFPSQTREEIRDAIKLEEERRAALVKNLYRLRALRLSRDRASVADR*
Ga0126379_110270492	3300010366	Tropical Forest Soil	MSDTEQRGIAETFFEPAQTHEEITDALRLEDERRAVLVKNMCRLRALRLLRGERPQ*
Ga0126381_1004732322	3300010376	Tropical Forest Soil	MSEVEQREVAETLFEQRREEIRDAIKLEEERRAALVKNLYRLRALRLSQVRDSMRFHEGRS*
Ga0134126_123141391	3300010396	Terrestrial Soil	QSQTAETLFEQTRREITDAIKLEEERRAALVKNLYRLRALRLSRERGGVGVPHQN*
Ga0126383_119560831	3300010398	Tropical Forest Soil	MVEAEQREIAETLFEQTREEIRDAIKLEEERRAALVKNLYRLRALRLSQVRDSMRFHEGRS*
Ga0124850_10006154	3300010863	Tropical Forest Soil	MSETQQPEIPETLFPRQTREEVRDAIKLEEERRAALDKNLYRLRALRLSRDRASVADR*
Ga0137365_106176912	3300012201	Vadose Zone Soil	MSDTEQREVAEPLFEPSQTREQIRDAIKLEEERRTALVRNLYRLRALRLSRNRN
Ga0137379_105745212	3300012209	Vadose Zone Soil	MSDTEQREVAEPLFEPSQTREQIRDAIKLEEERRTALVRNLYRLRALRLSRNRNGMRIQER*
Ga0137370_109396961	3300012285	Vadose Zone Soil	GRIVMSDTEQREVAEPLFEPSQTRKQIRDAIKLEEERRTALVRNLYRLRALRLSRNRNGMRIQER*
Ga0153928_10280311	3300012677	Attine Ant Fungus Gardens	MPQLQPARIYERIAMSDTEQREIAKTFIEPRQAREEIRDALKLEEERRAAPVKNLYRLRALRLSR
Ga0126375_110839082	3300012948	Tropical Forest Soil	MSEAQQRDIAETIFEPTREEIKDAIKLEEERRAALVKNLYRLRALRLSRARGSMRFHEGLEQT*
Ga0126369_100926514	3300012971	Tropical Forest Soil	MSEAQQREIAETIFEPTREEIKDAIKLEEERRAALVKNLYRLRALRLSRDRRGMRIQEG
Ga0132258_101467517	3300015371	Arabidopsis Rhizosphere	MPEPAQREIAKTLFEPTREEIRDAIKLEEERRATLVKNLYRLKALRLSRDRNRSRIEEDQSYRR*
Ga0182036_105716222	3300016270	Soil	KELPVSDTEQREIAETLFPSQTPEEIRDAIKLEKRRAALVKNLYRLRAPRLSLDRGS
Ga0182041_102896363	3300016294	Soil	MSDTEQREIVETLFPSQTREEIRDAIKLEEERRAALVKNLYRLRALRLSRDRRGMRIPEGLGQGR
Ga0182033_116755181	3300016319	Soil	MSDTEQLEIAETLFPSQTHQEIRDAIKLEEERRAALVKNLYRLRALRLSRD
Ga0182033_118372542	3300016319	Soil	MSNAQQREIAETIFEPTREEIKDAMQLEEERRAALVKNLYRLRALRLSRDRNSMRIEQERSQRR
Ga0182035_112530632	3300016341	Soil	VPSSTERTLMPDTLQREIAETLFPSQTHVEIRDAIKLEEERRAVLIKNLYRLKALRLSRDRASVPVR
Ga0182035_119171492	3300016341	Soil	MFKFALSSAVKKVPMSGTEQREIAETLFPSQTREEIKDAMKLEEDRRAALVKNLYRLRALRLSRDRRGMRIPEGLGQGR
Ga0182032_101083392	3300016357	Soil	MSEVEQRDVAETLFEQRREEIRDAIKLEEERRAALVKNLYRLRTLRLSRDRSRMRIKEARSQHR
Ga0182032_105136414	3300016357	Soil	GRSPMSETQQREIAETLFPSQTREEIRDAIKLEEERRAVLIKNLYRLRALRLSRDQSGMGIQQR
Ga0182034_106398473	3300016371	Soil	QQREIAETLFPSQTREEIRDAIKLEEERRAVLIKNLYRLRALRLSRDQSGMGIQQR
Ga0182040_103786103	3300016387	Soil	ANGRSPMSETQQREIAETLFPSQTREEIRDAMKLEEERRAVLIKNLYRLKALRLSRDRGSMQMHEG
Ga0187802_100001511	3300017822	Freshwater Sediment	MSDTEQREIAETLFEPSQTREEIRDAIKLEEERRAALVKNLYRLRDLRLSRGRGGMRIQE
Ga0187802_102171322	3300017822	Freshwater Sediment	MPDGEPLEIAETLFRGPTREEIRDAIKLEEERRAALVKNLYRLRALRLSRDRGNDSAQGVGGG
Ga0187824_100852062	3300017927	Freshwater Sediment	MSDTEQREIAANLFGPSQACEEIRDALKLEEERRAALVKNLYRLRALRLSRDRGSMRIQE
Ga0187824_101628251	3300017927	Freshwater Sediment	MPDAEQREVAETVFGRTGEEIRDAIKLEDERRAVLVKNLYRLRALRLSQGRSSLQDLPNPDR
Ga0187824_101645561	3300017927	Freshwater Sediment	QREIAETLFEPSQTREEIRDAIKLEEERRAALVKNLYRLRDLRLSRGRGGMRIQEG
Ga0187801_104038371	3300017933	Freshwater Sediment	MPDGEPLEIAETLFRGPTREEIRDAIKLEEERRAALVKNLYRLRALRLSRDRGNSAQGVGGC
Ga0187809_104414221	3300017937	Freshwater Sediment	MVDAMSDVEQRENAKSLFGQTREEIKDAIKLEEERRAVLVKNLYRLRALRVSRDRGDVDF
Ga0187783_100536602	3300017970	Tropical Peatland	MSDTAQREIAETLFLSQTCEEIKDAIKLEEERRAALVKNQYRLRALRLSRERGSIH
Ga0187823_100199382	3300017993	Freshwater Sediment	MSEAEQREIAQTFFEKTRAELRNAIELEEERRAVLVKNLYRLRALRVSRDRGDVDF
Ga0187804_102524302	3300018006	Freshwater Sediment	MPDGEPLEIAETLFRGPTREEIRDAIKLEEERRAALVKNLYRLKSLRLSRNQASKPEHQG
Ga0193751_10081543	3300019888	Soil	MSDTEQREIAESLFEPSQTREEIRDAIKLEEERRAALVKNLYRLRGLRLSRDRGGMRFQE
Ga0210399_100141765	3300020581	Soil	MSDTEQREIAKTFIEPRQAHEEIRDASKLEEERRAALVKNLYRLRTLRLSRRQGGLRIQE
Ga0210394_107558432	3300021420	Soil	IAMSDTEQREIAKTFIEPRQAHEEIRDALKLEEERRAALVKNLYRLRALRLSRGQGGLRIQER
Ga0126371_101060564	3300021560	Tropical Forest Soil	MSEAEQREVAETLFEQRREEIRDAIMLEEERRAALVKNLYRLRALRLSRDRSRMRIKEARSQHR
Ga0126371_115567561	3300021560	Tropical Forest Soil	MSEAQQRDIAETIFEPTREEIKDAIKLEEERRAALVKNLYRLRALRLSRDRRGMRIQEGLGQGR
Ga0126371_129649161	3300021560	Tropical Forest Soil	MSEPEQRGAAESLFEQRRAEIRDAVKLEEERRAASVKNLYRLRALRLSRDRNRMPIEPS
Ga0207699_109948872	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MADAMSDEQSQAAETLFEQTRREITDAIKLEEERRAALVKNLYRLRALRLSRERGGVGFHHQG
Ga0207699_110908732	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSEPEQRGVAEALFEQRRVEIRDAVKLEEERRAVLVKNLYRLRALRLSRDRNRRPNNEQR
Ga0207700_105536311	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MADAMSDEQSQTAETLFEQTRREITDAIKLEEERRAALVKNLYRLRALRLSRERGGVGIPHQN
Ga0209473_11805091	3300026330	Soil	MFQPQQRGIAETAFEQRREAIKDAMKLEDERRATLVKNLYRLRALRLSLPKQN
Ga0208365_10391722	3300027070	Forest Soil	MPEAEQREIAETLFERTHEEIRDAIRLEDERRAALVKNLYRLRALRLSRDRVSMRIQDG
Ga0209074_102010391	3300027787	Agricultural Soil	MSQPQQQQIAESVFEQRREEIKDAMKLEDERRATLVKNLYRLRALRLSLPKQNDHR
Ga0209040_101591031	3300027824	Bog Forest Soil	MSDTEQREIAVALFPRQTREEIRDAIKQEEERRAALVKNLYRLRDLRLSRGRGSMRIQEG
Ga0209465_100676872	3300027874	Tropical Forest Soil	MSEAQQREIAETIFEPTREEIKDAIKLEEERRAALVKNLYRLRALRLSRDRRGMRIQEGSGQGR
Ga0075386_116101391	3300030916	Soil	MSDTEQREVAEPLFEPSQTREEIRDAIKLEEERRAALVKNLYRLRGLRLSRDRGSMRFQG
Ga0170834_1026059201	3300031057	Forest Soil	MSDTQQREIAQTLFEPSQTREEIRDAIKLEEERRATSVKNLYRLRGLRLSRDRGSMRFQG
Ga0170834_1104355922	3300031057	Forest Soil	MSDTEQREVAETLFEPSQTREQIRDAIRLEEERRTALVKNLYRLRARRLSRNRSSMRIQE
Ga0170823_115784421	3300031128	Forest Soil	MSDTEQREIAQTLFEPSQTREEIRDAIKLEEERRATLVKNLYRLKALRLSRDRGGVRIQE
Ga0170824_1069311263	3300031231	Forest Soil	MSDTEQREVAEPLFEPSQTREQIRDAIKLEEERRTTLVRNLYRLRALRLSRNRNSMRIQE
Ga0170824_1130223773	3300031231	Forest Soil	MSDTQQREIAQTLFEPSQTREEIRDAIKLEEERRATSVKNLYRLRALRLSRNRGSLRIQE
Ga0170824_1159227882	3300031231	Forest Soil	MSDTEQREIAESLFEPSQTREEIRDAIKLEEERRAALVKNLYRLRGLRLSRDRGSMRFQG
Ga0170824_1253105052	3300031231	Forest Soil	MSDTEQREIAEILFEPSQTREEIRDAIKLEEERRAALVRNLYRLRALRLSRGLGSVRIQK
Ga0170818_1051693522	3300031474	Forest Soil	MSDTQQREIAQTLFEPSQTREEIRDAIKLEEERRATSVKNLSRLRALRLSRNRGSLRIQE
Ga0318541_100359523	3300031545	Soil	MDTEQRELAETLFPSQAREEIKDAIRLEEERRAALVKNLYRLRALRLSRDRRGMQIQEGLGQGR
Ga0318538_106311881	3300031546	Soil	MSETQQREIAETLFPSQTREEIRDAMKLEEERRAVLIKNLYHLKALRLSRDRGSMQMHEG
Ga0310915_100611382	3300031573	Soil	MSETQQREIAETLFPSQTREEIRDAIKLEEERRAVLIKNLYRLRALRLSRDQSGMGIQQR
Ga0310915_104616002	3300031573	Soil	MSDTEQREIAETLFPSQTHEEIRDAIKLEEVRRAALVKNLYRLRALRLSRDRGSIRIQEGSDQPAD
Ga0318542_101267971	3300031668	Soil	MSEAEQREIAETRFERTREEVRDAIKLEEERRAALVKNLYRLRSLRFITGPKQN
Ga0318574_103975901	3300031680	Soil	MSDTEQREIAETLFPSRTHEEIRDAIKLEEERRAALVKNLYRLRALRLSRERGSIRISRKAQISAAD
Ga0307474_106343752	3300031718	Hardwood Forest Soil	MSDTEQREIAKTFIEPRQAHEEIRDALKLEEERRAALVKNLYRLRALRLSRGQGGLRIQE
Ga0307474_112264781	3300031718	Hardwood Forest Soil	MSETEQRDVETLFERTREEIRNAITLEEERRAALVKNLYRLSRDRRRMRIEEGRGQGH
Ga0306917_100918723	3300031719	Soil	GRSPMSETQQREIAETLFPSQTREEIRDAMKLEEERRAVLIKNLYRLKALRLSRDRGSMQMHEG
Ga0318501_105532551	3300031736	Soil	MSDTEQREIAETLFPSQTHEEIRDAIKLEEERRAALVKNLYRLRALRLSRDRGSIRIQEGSDQRR
Ga0306918_100309074	3300031744	Soil	MAEAEQREIAETLFGRTREEIRDAIKLEEERRAALVKNLYRLRTLRLSRDRSRMRIKEARSQHR
Ga0306918_101187371	3300031744	Soil	AKECRFAPLSTANGRSPMSETQQREIAETLFPSQTREEIRDAIKLEEERRAVLIKNLYRLRALRLSRDQSGMGIQQR
Ga0307477_100142114	3300031753	Hardwood Forest Soil	MSDTEQREIAKTFIEPRQAHEEIRDALKLEEERCAALVKNLYRLRALRLSRGQGGLRIQE
Ga0307475_110464671	3300031754	Hardwood Forest Soil	MACTVNAMPEAEQREIAETLFERTHEEIRDAIRLEDERRAALVKNLYRLRALRLSRDRVSMRIQDG
Ga0318535_103663332	3300031764	Soil	GCSVGCTANAMDTEQRELAETLFPSQAREEIKDAIRLEEERRAALVKNLYRLRALRLSRDRRGMQIQEGLGQGR
Ga0318509_101943262	3300031768	Soil	MSDTEQREIAETLFPSQTHEEIRDAIKLEEERRAALVKNLYRLRTLKLLGEPPHTL
Ga0318509_103935511	3300031768	Soil	STASNGRTPMSDTEQREIAETLFPSQTHEEIRDAINLEEERRAALVKNLYRLRALRLSRDRGSIRIQEGSDQRR
Ga0318521_108442081	3300031770	Soil	MSDTEQREIAETLFPSQTHEEIRDAIKLEEERRAALVKNLYRLRALRLSRDRGSIRIQEGSDQPAD
Ga0318546_106802101	3300031771	Soil	MSDMEQREIAETLFPSQTHEEIRDAIKLEEERRAALVKNLYRLRALRLSRDRGSIRIQEGSDQRR
Ga0318552_104852803	3300031782	Soil	SDTEQREIAETLFPSQTHEEIRDAIKLEEERRAALVKNLYRLRALRLSRDRGSIRIQEGSDQRR
Ga0307478_112094131	3300031823	Hardwood Forest Soil	YERIAMSDTEQREIAKTFIEPRQAHEEIRDALKLEEERRAALVKNLYRLRALRLSRGQGGLRIQER
Ga0310917_104701521	3300031833	Soil	APLSTANGRSPMSETQQREIAETLFPSQTREEIRDAIKLEEERRAVLIKNLYRLRALRLSRDQSGMGIQQR
Ga0306919_102323342	3300031879	Soil	MSETQQREIAETLFPSQTREEIRDAMKLEEERRAVLIKNLYRLKALRLSRDRGSMQMHEG
Ga0306919_104389492	3300031879	Soil	MSEAEQREVAETLFEQRREEIRDAIKLEEERRAALVKNLYRLRTLRLSRDRSRMRIKEARGQHR
Ga0318544_101605403	3300031880	Soil	MSDTEQLEIAETLFPSQTHQEIRDAIKLEEERRAALVKNLYRLRALRLSRDRGSIRIQEGSDQRR
Ga0306925_103129681	3300031890	Soil	MSDTEQREMAETLFPRQTREEIKGAIKLELEEERRAVLVKNLYRLRALRLSRDRGSVH
Ga0306925_103541034	3300031890	Soil	TANGRSPMSETQQREIAETLFPSQTREEIRDAIKLEEERRAVLIKNLYRLRALRLSRDQSGMGIQQR
Ga0306925_110392801	3300031890	Soil	MSEAHQREIAETLFERTHEEIRDAIKLEDERRAALVKNLYRLGALRLSRHGV
Ga0318520_106555731	3300031897	Soil	MSDTEQREIAETLFPSQTHEEIRDAIKLEEERRAALVKNLYRLRALRLSRDRGSIRI
Ga0306923_102251175	3300031910	Soil	MSDTEQREIAETLFPSQTHEEIRDAIKLEEERRAALVKNLYRLRALRLSHDRGS
Ga0306923_112273931	3300031910	Soil	PMSETQQREIAETLFPSQTREEIRDAIKLEEERRAALVKNLYRLKALRLSRDRGSVADR
Ga0306921_104751542	3300031912	Soil	MSEAEQREVAETLFEQRREEIRDAIKLEEERRAALVKNLYRLRTLRLSRDRSRMRIKEARSQHR
Ga0310912_102381371	3300031941	Soil	RSRFAPLSTANGRSPMSETQQREIAETLFPSQTREEIRDAIKLEEERRAVLIKNLYRLRALRLSRDQSGMGIQQR
Ga0310909_110740461	3300031947	Soil	STANGRSPMSETQQREIAETLFPSQTREEIRDAIKLEEERRAVLIKNLYRLKALRLSRDRASVADR
Ga0306926_102938143	3300031954	Soil	PMSETQQREIAETLFPSQTREEIRDAIKLEEERRAVLIKNLYRLKALRLSRDRASVADR
Ga0306926_128861792	3300031954	Soil	MPDTLQREIAETLFPSQTHVEIRDAIKLEEERRAVLIKNLYRLRALRLSRDRASVLDR
Ga0318530_100909972	3300031959	Soil	MSDTEQREIAETLFPSQAHEEIRDAIKLEEERRAALVKNLYRLRALRLSRDRGSIRIQEGSDQRR
Ga0318531_102994712	3300031981	Soil	MSDTEQREIAETLFPSQTHEEIRDAIKLEEERRAALVKNLYRLRALRLSRGRGRIRIQE
Ga0306922_100920595	3300032001	Soil	MSETQQREIAETLFPSQTREEIRDAIKLEEERRAVLIKNLYRLRALRLSRDQGGMGIQQR
Ga0306922_102470013	3300032001	Soil	VSDTEQREIAETLFPSQTPEEIRDAIKLEKRRAALVKNLYRLRAPRLSLDRGS
Ga0306922_118339742	3300032001	Soil	MSDTEQREIAETLFPSRTHEEIRDAIKLEEERRAALVKNLDRLRALRLSRDLGSIRIQKGSDQRR
Ga0306922_120939611	3300032001	Soil	NGWTPMSDTEQREMAETLFPRQTREEIKGAIKLELEEERRAVLVKNLYRLRALRLSRDRGSVH
Ga0318549_105145701	3300032041	Soil	NRLPPTETLLLSDTEQREIAETLFPSQTHEEIRDAIKLEEERRAALVKNLYRLRALRLSRDRGSIRIQEGSDQRR
Ga0318506_101769322	3300032052	Soil	MSETQQREIAETLFPSQTREEIRDAIKLEEERRAALVKNLYRLRALRLSRDRGSIRIREGSD
Ga0318533_114566621	3300032059	Soil	MSEAEQREVAETLFEQRREEIRDAIKLEEERRAALVKNLYRLRTLRLSRDRSRMRIK
Ga0306924_1003471111	3300032076	Soil	MSDTEQREIAETLFPSQTREEIRDAIKLEEERRAVLIKNLYRLRALRLLRDQGGMGIQQR
Ga0318518_100910181	3300032090	Soil	MSDTEQREIAETLFPSQTHEEIRDAIKLEEVRRAALVKNLYRLRALRLSRDRGSIRIQEGSDQRR
Ga0307471_1004260121	3300032180	Hardwood Forest Soil	MADAERREIAEMLFERTHEEIRDAIKLEDERRAALVKNLYRLRALRLSRDRVSMRIQDG
Ga0307471_1004297961	3300032180	Hardwood Forest Soil	MSDTEQREIAKTFIEPRQAREEIRDALKLEEERRAALVKNLYRLRALRLSRGQGGLRIQE
Ga0306920_1040621171	3300032261	Soil	MSDTEQREIAETLFPSQAHEEIRDAIKLEEERRAALVKNLYRLRALRLSRDRGSIRI
Ga0348332_135921471	3300032515	Plant Litter	MQSNIMSDAEQHETAERLFQRDQNREEIKEAIKLEEERRAAIVKNLYRLRALRL
Ga0310914_100964936	3300033289	Soil	IAETLFPSQTHEEIRDAIKLEEERRAALVKNLYRLRALRLSRDRGSIRIQEGSDQRR
Ga0310914_102471921	3300033289	Soil	PMSETQQREIAETLFPSQTREEIRDAIKLEEERRAVLIKNLYRLRALRLSRDQSGMGIQQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041942

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences