Metagenome / Metatranscriptome Family F041948

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F041948
Family Type	Metagenome / Metatranscriptome
Number of Sequences	159
Average Sequence Length	61 residues
Representative Sequence	MKLIITIVAGCLLLSICAIAQPHGKGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM
Number of Associated Samples	116
Number of Associated Scaffolds	159

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.05 %
% of genes near scaffold ends (potentially truncated)	30.82 %
% of genes from short scaffolds (< 2000 bps)	76.73 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.113 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (26.415 % of family members)
Environment Ontology (ENVO)	Unclassified (39.623 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.459 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 28.09% β-sheet: 0.00% Coil/Unstructured: 71.91%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 159 Family Scaffolds
PF03061	4HBT	6.92
PF01643	Acyl-ACP_TE	6.92
PF00248	Aldo_ket_red	6.29
PF00753	Lactamase_B	6.29
PF00856	SET	3.14
PF08241	Methyltransf_11	1.89
PF13650	Asp_protease_2	1.89
PF13279	4HBT_2	1.89
PF07927	HicA_toxin	0.63
PF11752	DUF3309	0.63
PF02735	Ku	0.63
PF09832	DUF2059	0.63

COG ID	Name	Functional Category	% Frequency in 159 Family Scaffolds
COG3884	Acyl-ACP thioesterase	Lipid transport and metabolism [I]	6.92
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	0.63
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.11 %
Unclassified	root	N/A	1.89 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.11 %
Unclassified	root	N/A	1.89 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.11 %
Unclassified	root	N/A	1.89 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	68.55 %
Unclassified	root	N/A	1.89 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.26 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	68.55 %
Unclassified	root	N/A	1.89 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1.26 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	37.11 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	5.03 %
Unclassified	root	N/A	1.89 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	1.26 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	37.11 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	5.03 %
Unclassified	root	N/A	1.89 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	1.26 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	37.11 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	5.03 %
Unclassified	root	N/A	1.89 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	0.63 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	37.11 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	5.03 %
Unclassified	root	N/A	1.89 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	37.11 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4.40 %
Unclassified	root	N/A	1.89 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_100104439	All Organisms → cellular organisms → Bacteria	3328	Open in IMG/M
3300000596\|KanNP_Total_noBrdU_T14TCDRAFT_1013143	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	899	Open in IMG/M
3300002245\|JGIcombinedJ26739_100362738	All Organisms → cellular organisms → Bacteria	1330	Open in IMG/M
3300002914\|JGI25617J43924_10005762	All Organisms → cellular organisms → Bacteria	3791	Open in IMG/M
3300005167\|Ga0066672_10033179	All Organisms → cellular organisms → Bacteria	2841	Open in IMG/M
3300005167\|Ga0066672_10721725	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	636	Open in IMG/M
3300005167\|Ga0066672_10785799	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	601	Open in IMG/M
3300005175\|Ga0066673_10744786	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	562	Open in IMG/M
3300005176\|Ga0066679_10240297	All Organisms → cellular organisms → Bacteria	1164	Open in IMG/M
3300005177\|Ga0066690_10074350	All Organisms → cellular organisms → Bacteria	2133	Open in IMG/M
3300005177\|Ga0066690_10144674	All Organisms → cellular organisms → Bacteria	1559	Open in IMG/M
3300005179\|Ga0066684_11103142	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	507	Open in IMG/M
3300005180\|Ga0066685_10293722	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1124	Open in IMG/M
3300005181\|Ga0066678_10853878	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	598	Open in IMG/M
3300005184\|Ga0066671_10035163	All Organisms → cellular organisms → Bacteria	2397	Open in IMG/M
3300005186\|Ga0066676_10015245	All Organisms → cellular organisms → Bacteria	3894	Open in IMG/M
3300005186\|Ga0066676_10213126	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1246	Open in IMG/M
3300005186\|Ga0066676_11154131	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508	Open in IMG/M
3300005187\|Ga0066675_10333724	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1105	Open in IMG/M
3300005332\|Ga0066388_101805662	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1087	Open in IMG/M
3300005332\|Ga0066388_102523998	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	934	Open in IMG/M
3300005338\|Ga0068868_102037014	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	545	Open in IMG/M
3300005445\|Ga0070708_100210318	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1822	Open in IMG/M
3300005445\|Ga0070708_101674416	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	591	Open in IMG/M
3300005447\|Ga0066689_10345564	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	927	Open in IMG/M
3300005467\|Ga0070706_100277710	All Organisms → cellular organisms → Bacteria	1563	Open in IMG/M
3300005467\|Ga0070706_100491091	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
3300005467\|Ga0070706_100768477	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	892	Open in IMG/M
3300005467\|Ga0070706_100802229	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300005468\|Ga0070707_100167438	All Organisms → cellular organisms → Bacteria	2142	Open in IMG/M
3300005468\|Ga0070707_100176511	All Organisms → cellular organisms → Bacteria	2082	Open in IMG/M
3300005468\|Ga0070707_100899864	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300005468\|Ga0070707_101990255	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	548	Open in IMG/M
3300005471\|Ga0070698_100016543	All Organisms → cellular organisms → Bacteria	7781	Open in IMG/M
3300005529\|Ga0070741_10315624	All Organisms → cellular organisms → Bacteria	1461	Open in IMG/M
3300005540\|Ga0066697_10050347	All Organisms → cellular organisms → Bacteria	2359	Open in IMG/M
3300005552\|Ga0066701_10080591	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1865	Open in IMG/M
3300005553\|Ga0066695_10232396	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300005556\|Ga0066707_10883902	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	548	Open in IMG/M
3300005559\|Ga0066700_10726967	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	677	Open in IMG/M
3300005560\|Ga0066670_10989586	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	513	Open in IMG/M
3300005561\|Ga0066699_10232056	All Organisms → cellular organisms → Bacteria	1296	Open in IMG/M
3300005569\|Ga0066705_10273830	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1071	Open in IMG/M
3300005575\|Ga0066702_10811441	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300005576\|Ga0066708_10448628	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	828	Open in IMG/M
3300005764\|Ga0066903_100037566	All Organisms → cellular organisms → Bacteria	5639	Open in IMG/M
3300006032\|Ga0066696_10056493	All Organisms → cellular organisms → Bacteria	2224	Open in IMG/M
3300006032\|Ga0066696_10134394	All Organisms → cellular organisms → Bacteria	1527	Open in IMG/M
3300006173\|Ga0070716_101378327	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	572	Open in IMG/M
3300006175\|Ga0070712_100768645	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	825	Open in IMG/M
3300006175\|Ga0070712_101671052	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300006797\|Ga0066659_10316384	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1197	Open in IMG/M
3300006797\|Ga0066659_10506129	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300006800\|Ga0066660_10295436	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	1290	Open in IMG/M
3300009098\|Ga0105245_12704652	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	549	Open in IMG/M
3300010301\|Ga0134070_10104795	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	989	Open in IMG/M
3300010303\|Ga0134082_10055695	All Organisms → cellular organisms → Bacteria	1523	Open in IMG/M
3300010304\|Ga0134088_10038730	All Organisms → cellular organisms → Bacteria	2168	Open in IMG/M
3300010320\|Ga0134109_10238714	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	682	Open in IMG/M
3300010322\|Ga0134084_10014825	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2023	Open in IMG/M
3300010326\|Ga0134065_10013737	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2196	Open in IMG/M
3300010329\|Ga0134111_10174523	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	860	Open in IMG/M
3300010337\|Ga0134062_10050473	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1692	Open in IMG/M
3300010337\|Ga0134062_10319021	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	740	Open in IMG/M
3300010360\|Ga0126372_10496949	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1144	Open in IMG/M
3300010361\|Ga0126378_10079833	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3166	Open in IMG/M
3300010364\|Ga0134066_10023556	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1391	Open in IMG/M
3300010366\|Ga0126379_10003476	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	10191	Open in IMG/M
3300010373\|Ga0134128_13212892	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	502	Open in IMG/M
3300010398\|Ga0126383_13038431	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	548	Open in IMG/M
3300010401\|Ga0134121_10640174	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1000	Open in IMG/M
3300010401\|Ga0134121_10799592	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	906	Open in IMG/M
3300011269\|Ga0137392_10901779	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	728	Open in IMG/M
3300011271\|Ga0137393_11492219	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	566	Open in IMG/M
3300012198\|Ga0137364_10006151	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	6517	Open in IMG/M
3300012198\|Ga0137364_10068375	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2423	Open in IMG/M
3300012198\|Ga0137364_10082745	All Organisms → cellular organisms → Bacteria	2224	Open in IMG/M
3300012199\|Ga0137383_10109745	All Organisms → cellular organisms → Bacteria	2007	Open in IMG/M
3300012201\|Ga0137365_11326109	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	509	Open in IMG/M
3300012202\|Ga0137363_11121165	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	669	Open in IMG/M
3300012202\|Ga0137363_11295043	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	617	Open in IMG/M
3300012205\|Ga0137362_11479540	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	566	Open in IMG/M
3300012209\|Ga0137379_10731643	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	894	Open in IMG/M
3300012209\|Ga0137379_11353028	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	616	Open in IMG/M
3300012210\|Ga0137378_10024971	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	5266	Open in IMG/M
3300012210\|Ga0137378_10038172	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4289	Open in IMG/M
3300012357\|Ga0137384_11260732	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	585	Open in IMG/M
3300012357\|Ga0137384_11362328	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300012359\|Ga0137385_11329044	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	582	Open in IMG/M
3300012361\|Ga0137360_11476520	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	584	Open in IMG/M
3300012362\|Ga0137361_10310911	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1443	Open in IMG/M
3300012362\|Ga0137361_11769771	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	536	Open in IMG/M
3300012363\|Ga0137390_12020678	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	501	Open in IMG/M
3300012582\|Ga0137358_10612960	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	730	Open in IMG/M
3300012917\|Ga0137395_10145664	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1618	Open in IMG/M
3300012917\|Ga0137395_11308171	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	500	Open in IMG/M
3300012923\|Ga0137359_10409697	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1201	Open in IMG/M
3300012923\|Ga0137359_10715110	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	872	Open in IMG/M
3300012923\|Ga0137359_10792414	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	822	Open in IMG/M
3300012925\|Ga0137419_11738222	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	533	Open in IMG/M
3300012929\|Ga0137404_12068411	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300012930\|Ga0137407_11020165	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	784	Open in IMG/M
3300012975\|Ga0134110_10032348	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2046	Open in IMG/M
3300012975\|Ga0134110_10515555	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300012977\|Ga0134087_10106712	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300012977\|Ga0134087_10500182	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	612	Open in IMG/M
3300013307\|Ga0157372_11191965	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	880	Open in IMG/M
3300017657\|Ga0134074_1386366	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	519	Open in IMG/M
3300018061\|Ga0184619_10154140	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300018431\|Ga0066655_10015677	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3416	Open in IMG/M
3300018431\|Ga0066655_10887400	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	609	Open in IMG/M
3300018433\|Ga0066667_10112037	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1843	Open in IMG/M
3300018433\|Ga0066667_10801011	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	801	Open in IMG/M
3300018482\|Ga0066669_10305720	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1294	Open in IMG/M
3300019885\|Ga0193747_1138806	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300019888\|Ga0193751_1000407	All Organisms → cellular organisms → Bacteria	34830	Open in IMG/M
3300019888\|Ga0193751_1002190	All Organisms → cellular organisms → Bacteria	11944	Open in IMG/M
3300019888\|Ga0193751_1139536	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	882	Open in IMG/M
3300020170\|Ga0179594_10251547	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	666	Open in IMG/M
3300021086\|Ga0179596_10475493	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	633	Open in IMG/M
3300021478\|Ga0210402_10098764	All Organisms → cellular organisms → Bacteria	2619	Open in IMG/M
3300025910\|Ga0207684_10090100	All Organisms → cellular organisms → Bacteria	2613	Open in IMG/M
3300025910\|Ga0207684_10091807	All Organisms → cellular organisms → Bacteria	2588	Open in IMG/M
3300025910\|Ga0207684_10203404	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1708	Open in IMG/M
3300025910\|Ga0207684_10386009	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1204	Open in IMG/M
3300025910\|Ga0207684_10483313	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1062	Open in IMG/M
3300025910\|Ga0207684_10703186	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300025922\|Ga0207646_10727033	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	887	Open in IMG/M
3300025939\|Ga0207665_10283431	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1234	Open in IMG/M
3300026309\|Ga0209055_1016900	All Organisms → cellular organisms → Bacteria	3605	Open in IMG/M
3300026312\|Ga0209153_1070309	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1273	Open in IMG/M
3300026314\|Ga0209268_1028453	All Organisms → cellular organisms → Bacteria	1946	Open in IMG/M
3300026326\|Ga0209801_1243700	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	688	Open in IMG/M
3300026335\|Ga0209804_1004081	All Organisms → cellular organisms → Bacteria	8405	Open in IMG/M
3300026335\|Ga0209804_1229097	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	732	Open in IMG/M
3300026446\|Ga0257178_1012821	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	946	Open in IMG/M
3300026507\|Ga0257165_1096601	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	548	Open in IMG/M
3300026514\|Ga0257168_1113971	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	602	Open in IMG/M
3300026528\|Ga0209378_1006552	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	7446	Open in IMG/M
3300026530\|Ga0209807_1108802	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1177	Open in IMG/M
3300026532\|Ga0209160_1092398	All Organisms → cellular organisms → Bacteria	1557	Open in IMG/M
3300026537\|Ga0209157_1135993	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1121	Open in IMG/M
3300026548\|Ga0209161_10013505	All Organisms → cellular organisms → Bacteria	6065	Open in IMG/M
3300026552\|Ga0209577_10584300	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	683	Open in IMG/M
3300027537\|Ga0209419_1026396	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300027643\|Ga0209076_1221180	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	515	Open in IMG/M
3300027875\|Ga0209283_10894668	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	538	Open in IMG/M
3300028047\|Ga0209526_10254915	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1199	Open in IMG/M
3300030848\|Ga0075388_11448882	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	539	Open in IMG/M
3300031715\|Ga0307476_10105546	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1993	Open in IMG/M
3300031754\|Ga0307475_10750438	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	776	Open in IMG/M
3300031820\|Ga0307473_10252254	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1083	Open in IMG/M
3300031962\|Ga0307479_10533632	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1156	Open in IMG/M
3300031962\|Ga0307479_11538440	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	622	Open in IMG/M
3300032180\|Ga0307471_101338685	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	878	Open in IMG/M
3300032180\|Ga0307471_101407103	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.11%
Host-Associated	Host-Associated	1.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.48%
Plants	Host-Associated → Plants	1.89%
Aquatic	Environmental → Aquatic	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.26%
Sediment	Environmental → Aquatic → Sediment	0.63%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.99%
Loam	Environmental → Terrestrial → Soil → Loam	19.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.63%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	30.19%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.77%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.63%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	26.42%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	13.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	9.43%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.66%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.52%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.63%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000596	Amended soil microbial communities from Kansas Great Prairies, USA - Total DNA no BrdU F1.4TC	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026446	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-B	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300030848	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1001044394	3300000559	Soil	MKLVVAIVSGCLLLTVCAFAQPHGKGKGFGPDRNPARVSPKPTPPGHHYGWQKGKHNPHRL*
KanNP_Total_noBrdU_T14TCDRAFT_10131432	3300000596	Soil	MKLVVAIVSGCLLLTVCAFAQPHGKGKGFGPDRNPARVSPKPTPPGHHYGWQK
JGIcombinedJ26739_1003627382	3300002245	Forest Soil	MKLANRTKLALAIVAGFLSLSMHVMAQPHGRGIGFGPNKNPARVTPKPTPPGHHYGWQKGKHNPHRM*
JGI25617J43924_100057622	3300002914	Grasslands Soil	MKLITTIVAGCFLLSIYATAQPNGKGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0062595_1011524273	3300004479	Soil	MNTTQKKLTATFTAAFLSVGVCVMAQPHGHGKGFGPMNNPARVTPKPTPPGHHYGWQK
Ga0066672_100331794	3300005167	Soil	MKLIITIVAGSLLLSICAIAQPHGRGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0066672_107217252	3300005167	Soil	MKLIIAIMGTVLLLSIYATAQPHGKGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0066672_107857991	3300005167	Soil	FPASRLQLKESSNMKLGIAVLTGCLSLALCAIAQPNGKGIGFGPNKNPAKVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0066673_107447862	3300005175	Soil	MKLIMTIVAGSLLLSICAIAQPHGHGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0066679_102402972	3300005176	Soil	MKLIITIVASCLLLSICAMAQPNGKGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0066690_100743501	3300005177	Soil	VAGSLLLSICAIAQPHGRGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0066690_101446744	3300005177	Soil	MKLGIAILAGCFSLSICAIAQPHGKGIGFGPNNNPAKVTPKPTPPGHHYGWQKGKQNPHRM*
Ga0066684_111031421	3300005179	Soil	MKAGIAIVMSCLLVSICAVAQPHGKGIGFGPKNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0066685_102937222	3300005180	Soil	MKLIITIVAGSLLLSICAIAQPHGHGIGFGPNNNPARVTPKPTPPGHHYGWQKG
Ga0066678_108538781	3300005181	Soil	MKLIITIVAGSLLLSICAIAQPHGHGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0066671_100351632	3300005184	Soil	MKLIITMLASCLLLSIYAMAQPHGKGIGFGPNNNPARVTPKPTPPGHHYGWQKGKQNPHRM*
Ga0066676_100152456	3300005186	Soil	MRLIVTIVAGCFLLSIYAMAQPHGNGIGFGPNNNPARVSPKPTPPGHHYGW
Ga0066676_102131264	3300005186	Soil	FLLSIYAMAQPHGNGIGFGPNNNPARVSPKPTPPGHHYGWQKGKHNPHRM*
Ga0066676_111541312	3300005186	Soil	MKSIITIVAGCFLLSIYAMAQPHGNGIGFGPNNNPARVSPKPTPPGHHYGW
Ga0066675_103337241	3300005187	Soil	MKLIITIVAGCFLLSICAIAQPHGKGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPH
Ga0066388_1018056622	3300005332	Tropical Forest Soil	MRLIVTIVAGCLLLSIYAMAQPHGNGIGFGPNNNPARVSPKPTPPGHHFGWQKGKHN
Ga0066388_1025239983	3300005332	Tropical Forest Soil	MKLITTIVAGCFLLSIYATAQPHGKGIGFGPNNNPARVTPKPTPPGHHFGWQKGKHNPHRM*
Ga0068868_1020370141	3300005338	Miscanthus Rhizosphere	MKIIVTIVTGCGLLSVCAMAQPHGKGIGFGPKNNPARVSPKPTPPGHHYGWQKGKHNPHRL*
Ga0070708_1002103182	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKLIITIVSSCLLLSICAMAQPNGKGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0070708_1016744161	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKLIITIVTGCLLLSICAIAQPHGQGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0066689_103455642	3300005447	Soil	MRSIVTIVAGCFLLSIYAMAQPHGNGIGFGPNNNPARVSPKPTPPGHHFGWQKGKHNPHRM*
Ga0070706_1002777102	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKLIITIVAGCLLFSICAIAQPHGNGIGFGPNNNPARVTPKPTPPGHHFGWQKGKHNPHRM*
Ga0070706_1004910912	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKLITTIVAGCFLLSICAIAQPHGKGIGFGPNNNPARVTPKPTPPGHHFGWQKGKHNPHRM*
Ga0070706_1007684772	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKLIITIVAGCLLLSICAIAQPHGNGIGFGPNNNPARVTPKPTPPAHHYGWQKGKHNPHRM*
Ga0070706_1008022292	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKLITTIVAGCFLLSIYATAQPNGKGIGFGPNNNPARVTPKPTPPGHHYGWQKGKYNPHRM*
Ga0070707_1001674383	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKLIITIVAGFLLLSICAIAQPHGRGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0070707_1001765114	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKLIITIVAGCLLLSICAIAQPHGKGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0070707_1008998642	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKLIITIVAGCLLLSICAIAQPHGNGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0070707_1019902551	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	KGGKEIMKLIITIVAGCLLFSICAIAQPHGNGIGFGPNNNPARVTPKPTPPGHHFGWQKGKHNPHRM*
Ga0070698_1000165436	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VKLIIAIVTTSLLLSIYATAQPNGKGIGFGPNNNPARVTPKPTPPGHHNGWQKGKHNPHRM*
Ga0070741_103156244	3300005529	Surface Soil	VNHEIIVTIVTGCGLLAVCAMAQPHGKGIGFGPKNNPARVSPKPTPPGHHYGWQKGKHNPHRL*
Ga0066697_100503471	3300005540	Soil	MRLIVTIVAGCFLLSIYAMAQPHGNGIGFGPNNNPARVSPKPTPPGHHFGWQKGKHNPHRM*
Ga0066701_100805912	3300005552	Soil	MRSIVTIVAGCFLLSIYAMAQPHGNGIGFGPNNNPARVSPKPTPPGHHFGWQKGKHNPHRL*
Ga0066695_102323962	3300005553	Soil	MKSIITIVAGCFLLSIYAMAQPHGNGIGFGPNNNPARVSPKPTPPGHHYGWQKGKHNPHRL*
Ga0066707_108839021	3300005556	Soil	MRSIVTIVAGCFLLSIYAMAQPHGNGIGFGPNNNPARVSPKPTPPGHH
Ga0066700_107269672	3300005559	Soil	MKLIVTIVAGSLLLSICAIAQPHGRGIGFGPNNNPARVTPKPAPPGHHFGWQKGKHNPHRI*
Ga0066670_109895861	3300005560	Soil	CLLLSIYAMAQPHGKGIGFGPNNNPARVTPKPTPPGHHYGWQKGKQNPHRM*
Ga0066699_102320564	3300005561	Soil	KRQHNLGIAITAVSMLLSIYAMAQPNGKGKGFGPNNNPARVTPKPTPPGYHYGWQKGKHNPHRM*
Ga0066705_102738303	3300005569	Soil	MKILIAIVSGCLLLSICAMAQPHGKGIGFGPNNNPARVAPKPTPPGHHYGWQKGKHNPHRM*
Ga0066702_108114412	3300005575	Soil	MKLIITILASCLLLSIYAMAQPHGKGIGFGPNNNPARVTPKPTPPGHHYGWQKGKQNPHRM*
Ga0066708_104486282	3300005576	Soil	MKLIVTIVAGSLLLSICAIAQPHGHGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNP
Ga0066903_1000375669	3300005764	Tropical Forest Soil	MKSGIAIVTGCLLLAISAMAQPHGKGIGFGPHNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0066696_100564935	3300006032	Soil	MRLIVTIVAGCFLLSIYAMAQPHGNGIGFGPNNNPARVSPKPTPPGHHYGWQKGKHNPHRM*
Ga0066696_101343944	3300006032	Soil	TIVAGSLLLSICAIAQPHGRGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0070716_1013783271	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MRLGIAIAMSYLLMSITAIAQPHGKGIGFGPNGNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0070712_1007686453	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKLIITIVAGCLLLSICAIAQPHGRGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0070712_1016710521	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKLGIAIVTGCLLMSIQLLAQPHGKGIGFGPKNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0066659_103163842	3300006797	Soil	MKLIIAIVASCLLLSICAMAQPNGKGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0066659_105061291	3300006797	Soil	ALVPDFPASRLQLKESSNMKLGIAVLAGCLSLAVCAIAQPNGKGIGFGPKNNPAKVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0066660_102954361	3300006800	Soil	AGCLLLPIYAMAQPNEKGIGFGPNNNPARVTLKPTPPGHHYGWQKGKHNPHRM*
Ga0105245_127046521	3300009098	Miscanthus Rhizosphere	MKLGVTIMAGCLLLSIQLMAQPHGKGIGFGPKNNPGKVTPKPTPPGHHYGWQK
Ga0134070_101047951	3300010301	Grasslands Soil	IITIVAGSLLLSICAIAQPHGHAIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0134082_100556952	3300010303	Grasslands Soil	MKLIITIVAGSLLLSICAIAQPHGRGIGFGPNNNPARVTPKPTPPGHHYGWQKGNHNPHRM*
Ga0134088_100387303	3300010304	Grasslands Soil	MKLIITIVAGSLLLSICAIAQPHGHGIGFGPNNNPARVTPKPTPPGHHYGWQKGNHNPHRM*
Ga0134109_102387141	3300010320	Grasslands Soil	MKLIITIVAGSLLLSISAIAQPHGRGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0134084_100148254	3300010322	Grasslands Soil	MKLIITIVAGSLLLSICAIAQPHGHGIGFGQNNNPARVTPKPTPPGHHYGWQKGNHNPHRM*
Ga0134065_100137374	3300010326	Grasslands Soil	MKLIMTIVAGSLLLSICAIAQPHGRGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0134111_101745231	3300010329	Grasslands Soil	MKSIITIVAGCFLLSIYAMAQPHGNGIGFGPNNNPARVSPKPTPPGHHFGWQKGKHNPHR
Ga0134062_100504731	3300010337	Grasslands Soil	KLIVTIVAGSLLLSICAIAQPHGRGIGFGPNNNPARVTPKPAPPGHHFGWQKGKHNPHRI
Ga0134062_103190211	3300010337	Grasslands Soil	KLIVTIVAGSLLLSICAIAQPHGRGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM
Ga0126372_104969492	3300010360	Tropical Forest Soil	MQMKILSSVIVVACLMLPLFVTAQPNGKGKGVGPNNTPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0126378_100798334	3300010361	Tropical Forest Soil	MQMKILSSVIVVACLMLPLFVTAQPNGKGKGVGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0134066_100235562	3300010364	Grasslands Soil	MKLIVTIVAGSLLLSICAIAQPHGHGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0126379_100034765	3300010366	Tropical Forest Soil	MQMKILSSVIVVACLMLPLFVTAQPNGKGKGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0134128_132128921	3300010373	Terrestrial Soil	MRLGIAIAMSCLLMSITAIAQPHGKGIGFGPNSNPARVTPKPTPPGHHYGWQK
Ga0126383_130384312	3300010398	Tropical Forest Soil	MQMKILSGVIVVACLMLPLFVTAQPNGKGKGFGPNNNPARVTPKPTPPGHHYGWQ
Ga0134121_106401743	3300010401	Terrestrial Soil	MKLGITIMAGCLLLSIQLMAQPHGKGIGFGPKNNPGKVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0134121_107995922	3300010401	Terrestrial Soil	MRLGIAIAMSCLLMSITAIAQPHGKGIGFGPNSNPARVTPKPTPPGHHYGWQKGKHNPHRI*
Ga0137392_109017792	3300011269	Vadose Zone Soil	MKLIITIVAGSLLLSICAIAHPHGRGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0137393_114922191	3300011271	Vadose Zone Soil	KRRKEIMKLITTIVAGCFLLSIYATAQPNGKGIGFGPNNNPARVTPKPTPPGHHFGWQKGKHNPHRM*
Ga0137364_100061519	3300012198	Vadose Zone Soil	MKSIITIVAGCFLLSIYAMAQPHGNGIGFGPNNNPARISPKPTPPGHHYGWQKGKHNPHRL*
Ga0137364_100683755	3300012198	Vadose Zone Soil	VTIVAGSLLLSICAIAQPHGRGIGFGPNNNPARVTPKPAPPGHHFGWQKGKHNPHRI*
Ga0137364_100827451	3300012198	Vadose Zone Soil	MKLIVTIVAGSLLLSICVIAQPHGRGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0137383_101097452	3300012199	Vadose Zone Soil	MKLIITIVAGSLLLSICAIAQPHGHGIGFGPNNNPARVTPKPTPPGHHFGWQKGKHNPHRI*
Ga0137365_113261092	3300012201	Vadose Zone Soil	MKLVITIVAGCLLVSICAIAQPHGKGIGFGPNNTPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0137363_111211652	3300012202	Vadose Zone Soil	MKLIITIVAGSLLLSICAIAQPHGRGIGFGPNNNPARVTPKPTPPGQHYGWQKGKHNPHRM*
Ga0137363_112950431	3300012202	Vadose Zone Soil	MKAGIAIVISCLLVSICAVAQPRGKGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0137362_114795401	3300012205	Vadose Zone Soil	MKLANRTNLALAIVAGFLSLSMPVMAQPHGRGIGFGPNKNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0137379_107316431	3300012209	Vadose Zone Soil	MKLIVTIVAGSLLLSICAIAQPHGRGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0137379_113530281	3300012209	Vadose Zone Soil	MKLIITIVAGCLLFSICAIAQPHGQGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0137378_100249712	3300012210	Vadose Zone Soil	MKLIVTIVAGSLLLSICAIAQPHGRGIGFGPNNNPARVTPKPTPPGHHFGWQKGKHNPHRI*
Ga0137378_100381726	3300012210	Vadose Zone Soil	MKLVITIVAGCLLVSICAIAQPHGKGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0137384_112607321	3300012357	Vadose Zone Soil	MKLIVTIVAGSLLLSICAIAQPHGIGFGPNNNPARVTPKPAPPGHHFGWQKGKHNPHRM*
Ga0137384_113623282	3300012357	Vadose Zone Soil	MKLTIAILAGCLSLAICAIAQPNGKGIGFGPKNNPAKVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0137385_113290442	3300012359	Vadose Zone Soil	KESSDMKLTIAILAGCLSLAICAIAQPNGKGIGFGPKNNPAKVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0137360_114765201	3300012361	Vadose Zone Soil	MKAGIAIVMSCLLVSICAVAQPRGKGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0137361_103109113	3300012362	Vadose Zone Soil	MKLIITSVAGCLLLSICAIAQPHGNGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0137361_117697711	3300012362	Vadose Zone Soil	RRHRKRRETMKAGIAIVMSCLLVSICAVAQPRGKGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0137390_120206781	3300012363	Vadose Zone Soil	GGKEIMKLIITIVAGCLLLSICAIAQPHGNGIGFGPNNNPARVTPKPTPPGHHFGWQKGKHNPHRM*
Ga0137358_106129602	3300012582	Vadose Zone Soil	MKAGIAIVISCLLVSICAVAQPHGKGIGFGPKNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0137395_101456641	3300012917	Vadose Zone Soil	TIVAGCFLLSIYATAQPNGKGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0137395_113081712	3300012917	Vadose Zone Soil	MKLIITIVAGSLLLSICAIAQPHGHGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRK*
Ga0137359_104096971	3300012923	Vadose Zone Soil	MKAGIAIVMSCLLVSICAVAQPRGKGIGFGPKNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0137359_107151102	3300012923	Vadose Zone Soil	MNTTQRKLTAAVMAAFLSVAVCVMAQPNGKGKGNGKGFGPMNNPARVTPKPTPPGHHYGWQKGKHNPHRL*
Ga0137359_107924141	3300012923	Vadose Zone Soil	MKLIITIVAGSLLLSICAIAQPNGKGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0137419_117382221	3300012925	Vadose Zone Soil	MKLIVTIVAGSLLLSICAIAQPHGRGIGFGPNNNPARVTPKPTPPGHHYGWQKGKYNPHRM*
Ga0137404_120684112	3300012929	Vadose Zone Soil	MKLIITIVAGCLLLSICAIAQPHGRGIGFGPNNNPARVTPKPTPPGHHFGWQKGKHNPHRM*
Ga0137407_110201652	3300012930	Vadose Zone Soil	TIVAGCFLLSIYAMAQPHGNGIGFGPNNNPARVSPKPTPPGHHFGWQKGKHNPHRM*
Ga0134110_100323481	3300012975	Grasslands Soil	MKLIVPIVAGSLLLSICAIAQPHGRGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM*
Ga0134110_105155552	3300012975	Grasslands Soil	MKLIIAIVAGSLLLSICAIAQPHGHGIGFGPNNNPARVTPKPTPPGHHYGWQKGNHNPHRM*
Ga0134087_101067123	3300012977	Grasslands Soil	MKLIMTIVAGSLLLSICAIAQPHGHGIGFGPNNNPARVTPKPTPPGHHYGWQ
Ga0134087_105001822	3300012977	Grasslands Soil	MKLIITIVAGSLLLSICAIAQPHGHGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHN
Ga0157372_111919651	3300013307	Corn Rhizosphere	MNTTQKKLTATFTAAFLSVGVCMMAQPHGHGKGFGPMNNPARVTPKPTPPGHHYGWQKGKHNPHAVVSPTP*
Ga0134074_13863662	3300017657	Grasslands Soil	MKLIITIVAGSLLLSICAIAQPHGHGIGFGPNNNPARVTPKPTPPGHHYGWQKGNHNPH
Ga0184619_101541402	3300018061	Groundwater Sediment	MKLIITIVAGSLLLSICAIAQPHGRGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHR
Ga0066655_100156773	3300018431	Grasslands Soil	MKLIITIVAGSLLLSICAIAQPHGHGIGFGPNNNPARVTPKPTPPGHHYGWQKGNHNPHR
Ga0066655_108874002	3300018431	Grasslands Soil	MKLIITIVAGSLLLSICAIAQPHGRGIGFGPNNNPARVTPKPTPPGHHYGWQKG
Ga0066667_101120371	3300018433	Grasslands Soil	MRSIVTIVAGCFLLSIYAMAQPHGNGIGFGPNNNPARVSPKPTPPGHHFGWKKGKHNPHR
Ga0066667_108010112	3300018433	Grasslands Soil	AGSLLLSICAIAQPHGRGIGFGPNNNPARVTPKPTPPGHHFGWQKGKHNPHRI
Ga0066669_103057204	3300018482	Grasslands Soil	MKSIITIVAGCFLLSIYAMAQPHGNGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHR
Ga0193747_11388062	3300019885	Soil	MKLIITIVAGCLLLSICAIAQPHGRGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHR
Ga0193751_100040727	3300019888	Soil	MKLIITIVAGSLLLSICAIAQPHGRGIGFGPNNNPARVTPKPTPPGHHFGWQKGKHNPHR
Ga0193751_100219012	3300019888	Soil	MKLIITTVAGCLLLSICAIAQPKGKGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHR
Ga0193751_11395362	3300019888	Soil	MKVGIAILAGCLSLAICAIAQPNGKGIGFGPKNNPAKVTPKPTPPGHHYGWQKGKHNRM
Ga0179594_102515471	3300020170	Vadose Zone Soil	KGTIMKLIITIVAGCLLLSICAIAQPHGRGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM
Ga0179596_104754932	3300021086	Vadose Zone Soil	MKLITTIVAGCFLLSIYATAQPNGKGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHR
Ga0210402_100987642	3300021478	Soil	MKRIVTIVTGCFLMSICAVAQPHGQGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHR
Ga0207684_100901003	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKLIITIVAGCLLFSICAIAQPHGNGIGFGPNNNPARVTPKPTPPGHHFGWQKGKHNPHR
Ga0207684_100918074	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKLIITIVAGCLLLSICAIAQPHGKGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHR
Ga0207684_102034042	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKLIITIVAGCLLLSICAIAQPHGNGIGFGPNNNPARVTPKPTPPAHHYGWQKGKHNPHR
Ga0207684_103860091	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKLIITIVAGCLLLSICAIAQPHGNGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHR
Ga0207684_104833132	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKLITTIVAGCFLLSICAIAQPHGKGIGFGPNNNPARVTPKPTPPGHHFGWQKGKHNPHR
Ga0207684_107031862	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKLITTIVAGCFLLSIYATAQPNGKGIGFGPNNNPARVTPKPTPPGHHYGWQKGKYNPHR
Ga0207646_107270332	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MKLIITIVAGCLLLSICAIAQPHGNGIGFGPNNNPARVTPKPTPPGHHFGWQKGKHNPHR
Ga0207665_102834313	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKLGVTIMAGCLLLSIQLMAQPQGKGIGFGPKNNPGKVTPKPTPPGHHYGWQKGKHNPHR
Ga0209055_10169004	3300026309	Soil	MRLIVTIVAGCFLLSIYAMAQPHGNGIGFGPNNNPARVSPKPTPPGHHFGWQKGKHNPHR
Ga0209153_10703093	3300026312	Soil	MKLIITMLASCLLLSIYAMAQPHGKGIGFGPNNNPARVTPKPTPPGHHYGWQKGKQNPHR
Ga0209268_10284533	3300026314	Soil	MKLIITIVAGSLLLSICAIAQPHGHGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHR
Ga0209801_12437003	3300026326	Soil	MKLITAIMGTVLLLSIYATAQPHGKGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHR
Ga0209804_10040816	3300026335	Soil	MRSIVTIVAGCFLLSIYAMAQPHGNGIGFGPNNNPARVSPKPTPPGHHFGWQKGKHNPHR
Ga0209804_12290972	3300026335	Soil	MKLIITIVAGSLLLSICAIAQPHGRGIGFGPNDNPARVTPKPTPPGHHYGWQKGKHNPHR
Ga0257178_10128211	3300026446	Soil	KEIMKLITTIVAGCFWLSIYATAQPNGKGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM
Ga0257165_10966011	3300026507	Soil	MKLITTIVAGCFLLSSYATAQPNGKGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHR
Ga0257168_11139712	3300026514	Soil	GLSNQRRREKRRKEIMKLITTIVAGCFLLSIYATAQPNGKGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM
Ga0209378_10065528	3300026528	Soil	MKLIVTIVAGSLLLSICAIAQPHGHGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHR
Ga0209807_11088022	3300026530	Soil	MKLIITIVASCLLLSICAMAQPNGKGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHR
Ga0209160_10923982	3300026532	Soil	MKLIITIVAGSLLLSIGAIAQPHGRGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHR
Ga0209157_11359931	3300026537	Soil	MKLIITIVAGSLLLSICAIAQPHGHGIGFGPNNNPARVTPKPTPPGHHYG
Ga0209161_100135054	3300026548	Soil	MKLIVTIVAGSLLLSICAIAQPHGHGIGFGPNNNPARVTPKPTPPGHHYGWQKGNHNPHR
Ga0209577_105843002	3300026552	Soil	MKLIITMLASCLLLSIYAMAQPHGKGIGFGPNNNPARVTPKPTPPGHH
Ga0209419_10263963	3300027537	Forest Soil	MKLANRTKLALAIVAGFLSLSMHVMAQPHGRGIGFGPNKNPARVTPKPTPPGHHYGWQKGKHNPHRM
Ga0209076_12211802	3300027643	Vadose Zone Soil	KLIITIVAGCLLLSICAIAQPHGRGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM
Ga0209283_108946682	3300027875	Vadose Zone Soil	ITTIVAGCFLLSIYATAQPNGKGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHRM
Ga0209526_102549151	3300028047	Forest Soil	MKLIVTIMTGCFLLSICAIAQPHGKRIGFGPNNNPARVTSKPTPPGHHYGWQKGKHNPHR
Ga0075388_114488821	3300030848	Soil	MKLIITIVAGCLLLSICAIAQPHGRGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHN
Ga0307476_101055464	3300031715	Hardwood Forest Soil	MKTGMVIVMSCLLASISAVAQPHGKGIGFGPNNNPARATTKPTPPGHHYGWQKGKHNPHR
Ga0307477_110482981	3300031753	Hardwood Forest Soil	MNTTHKKLTAALTAAFLSVAVGVMAQPHGKGKGFGPMNSPARVTAKPTPPGHHYGWQKGKHNPHAVVSPTP
Ga0307475_107504382	3300031754	Hardwood Forest Soil	MNATQRKLTAAVMAAFLSVAICVMAQPHGQGKGFGPMNNPARVTPKPTPPGHHYGWQKGKHNPHAVVSPTP
Ga0307473_102522541	3300031820	Hardwood Forest Soil	MKLITTIVAGCLLVSICAIAQPHGNGIGFGPNNNPARVTPKPTPPGHHYGWQKGKHNPHR
Ga0307479_102986161	3300031962	Hardwood Forest Soil	MNATQRKLTAAVMAAFLSVAICVMAQPHGQGKGFGPMNNSARVTPKP
Ga0307479_105336322	3300031962	Hardwood Forest Soil	MNATQGKLTAAVMAAFLSVAICVMAQPHGQGKGFGPMNNSARVTPKPTPPGHHYGWQKGKHNPHAVVSPTP
Ga0307479_115384401	3300031962	Hardwood Forest Soil	GTKGREIMKLANRTKLALAILAGFLLLSMHVMAQPHGRGIGFGPNKNPARITPKPTPPGHHYGWQKGKHNPHRM
Ga0307471_1013386852	3300032180	Hardwood Forest Soil	MKLGIVITAVSMLLSIYAMAQPNGKGKGFGPNNNPARVTPKPTPPGYHYGWQKGKHNPHR
Ga0307471_1014071032	3300032180	Hardwood Forest Soil	MKLANRTKLALAILAGFLLLSMHVMAQPHGRGIGFGPNKNPARVTPKPTPPGHHYGWQKGKHNPHRM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041948

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences