NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F042004

Metagenome / Metatranscriptome Family F042004

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F042004
Family Type Metagenome / Metatranscriptome
Number of Sequences 159
Average Sequence Length 88 residues
Representative Sequence MKSNTTRNLASVVMLVILSPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTATSLPLSSVRATCAGDDASQGRIPLSAHSQQ
Number of Associated Samples 105
Number of Associated Scaffolds 159

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 32.69 %
% of genes near scaffold ends (potentially truncated) 39.62 %
% of genes from short scaffolds (< 2000 bps) 80.50 %
Associated GOLD sequencing projects 92
AlphaFold2 3D model prediction Yes
3D model pTM-score0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (97.484 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil
(22.642 % of family members)
Environment Ontology (ENVO) Unclassified
(35.220 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(44.025 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 44.63%    β-sheet: 0.00%    Coil/Unstructured: 55.37%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.33
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 159 Family Scaffolds
PF02954HTH_8 21.38
PF01478Peptidase_A24 8.18
PF04964Flp_Fap 7.55
PF13629T2SS-T3SS_pil_N 2.52
PF08666SAF 2.52
PF04977DivIC 2.52
PF09594GT87 1.89
PF00158Sigma54_activat 0.63
PF04273BLH_phosphatase 0.63
PF00733Asn_synthase 0.63
PF02310B12-binding 0.63

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 159 Family Scaffolds
COG3847Flp pilus assembly protein, pilin FlpExtracellular structures [W] 7.55
COG2919Cell division protein FtsBCell cycle control, cell division, chromosome partitioning [D] 2.52
COG4839Cell division protein FtsLCell cycle control, cell division, chromosome partitioning [D] 2.52
COG3453Predicted phosphohydrolase, protein tyrosine phosphatase (PTP) superfamily, DUF442 familyGeneral function prediction only [R] 0.63

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.48 %
UnclassifiedrootN/A2.52 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2001200001|2001219017All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1052Open in IMG/M
2001200001|2001230682All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter lipolyticus984Open in IMG/M
3300000559|F14TC_100570586All Organisms → cellular organisms → Bacteria4753Open in IMG/M
3300000891|JGI10214J12806_10100906All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium643Open in IMG/M
3300003267|soilL1_10000050All Organisms → cellular organisms → Bacteria → Proteobacteria4479Open in IMG/M
3300003267|soilL1_10056158All Organisms → cellular organisms → Bacteria1668Open in IMG/M
3300003319|soilL2_10006874All Organisms → cellular organisms → Bacteria10245Open in IMG/M
3300003319|soilL2_10028135All Organisms → cellular organisms → Bacteria → Proteobacteria2314Open in IMG/M
3300003324|soilH2_10010582All Organisms → cellular organisms → Bacteria → Acidobacteria2442Open in IMG/M
3300004114|Ga0062593_100445094All Organisms → cellular organisms → Bacteria → Acidobacteria1178Open in IMG/M
3300004156|Ga0062589_100043350All Organisms → cellular organisms → Bacteria → Acidobacteria2444Open in IMG/M
3300004479|Ga0062595_100871493All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium754Open in IMG/M
3300004480|Ga0062592_101753221All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium606Open in IMG/M
3300004798|Ga0058859_11710026All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300005093|Ga0062594_100021275All Organisms → cellular organisms → Bacteria → Acidobacteria2729Open in IMG/M
3300005093|Ga0062594_100406449All Organisms → cellular organisms → Bacteria → Acidobacteria1103Open in IMG/M
3300005289|Ga0065704_10554528All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium633Open in IMG/M
3300005293|Ga0065715_10094787All Organisms → cellular organisms → Bacteria → Acidobacteria4241Open in IMG/M
3300005295|Ga0065707_10815268All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium589Open in IMG/M
3300005328|Ga0070676_10874475All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium668Open in IMG/M
3300005332|Ga0066388_103882252All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium763Open in IMG/M
3300005333|Ga0070677_10663756All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300005335|Ga0070666_10605306All Organisms → cellular organisms → Bacteria800Open in IMG/M
3300005336|Ga0070680_100294489All Organisms → cellular organisms → Bacteria → Proteobacteria1376Open in IMG/M
3300005341|Ga0070691_10368156All Organisms → cellular organisms → Bacteria → Acidobacteria802Open in IMG/M
3300005341|Ga0070691_11022986All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium517Open in IMG/M
3300005354|Ga0070675_100741673All Organisms → cellular organisms → Bacteria → Acidobacteria896Open in IMG/M
3300005366|Ga0070659_100679548All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium889Open in IMG/M
3300005440|Ga0070705_100104805All Organisms → cellular organisms → Bacteria → Acidobacteria1794Open in IMG/M
3300005444|Ga0070694_100351395All Organisms → cellular organisms → Bacteria → Proteobacteria1142Open in IMG/M
3300005456|Ga0070678_100373986All Organisms → cellular organisms → Bacteria1231Open in IMG/M
3300005457|Ga0070662_100143482All Organisms → cellular organisms → Bacteria1853Open in IMG/M
3300005549|Ga0070704_100154947All Organisms → cellular organisms → Bacteria1806Open in IMG/M
3300005577|Ga0068857_100257933All Organisms → cellular organisms → Bacteria1599Open in IMG/M
3300005616|Ga0068852_102403455All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300005719|Ga0068861_102233443All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium549Open in IMG/M
3300005840|Ga0068870_10335984All Organisms → cellular organisms → Bacteria → Proteobacteria965Open in IMG/M
3300005843|Ga0068860_100223254All Organisms → cellular organisms → Bacteria1830Open in IMG/M
3300006169|Ga0082029_1171598All Organisms → cellular organisms → Bacteria → Acidobacteria1076Open in IMG/M
3300006844|Ga0075428_100933424All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter lipolyticus920Open in IMG/M
3300006844|Ga0075428_101789276All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium640Open in IMG/M
3300006845|Ga0075421_100115248All Organisms → cellular organisms → Bacteria → Proteobacteria3376Open in IMG/M
3300006845|Ga0075421_101362379All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter lipolyticus782Open in IMG/M
3300006845|Ga0075421_101794231All Organisms → cellular organisms → Bacteria → Acidobacteria660Open in IMG/M
3300006876|Ga0079217_10051678All Organisms → cellular organisms → Bacteria1653Open in IMG/M
3300006876|Ga0079217_10104059All Organisms → cellular organisms → Bacteria1283Open in IMG/M
3300006876|Ga0079217_10115385All Organisms → cellular organisms → Bacteria → Acidobacteria1236Open in IMG/M
3300006894|Ga0079215_10000815All Organisms → cellular organisms → Bacteria7646Open in IMG/M
3300006894|Ga0079215_10006163All Organisms → cellular organisms → Bacteria → Acidobacteria3429Open in IMG/M
3300006894|Ga0079215_10022396All Organisms → cellular organisms → Bacteria2144Open in IMG/M
3300006894|Ga0079215_11300414All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300006954|Ga0079219_10113899All Organisms → cellular organisms → Bacteria → Acidobacteria1361Open in IMG/M
3300007004|Ga0079218_13775607All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium515Open in IMG/M
3300009100|Ga0075418_12062148All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium621Open in IMG/M
3300009147|Ga0114129_10171344All Organisms → cellular organisms → Bacteria2959Open in IMG/M
3300009147|Ga0114129_10288917All Organisms → cellular organisms → Bacteria → Acidobacteria2189Open in IMG/M
3300009148|Ga0105243_12855913All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium523Open in IMG/M
3300009174|Ga0105241_11752696All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium605Open in IMG/M
3300009174|Ga0105241_12692813All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300009177|Ga0105248_10727427All Organisms → cellular organisms → Bacteria → Acidobacteria1120Open in IMG/M
3300009553|Ga0105249_11413384All Organisms → cellular organisms → Bacteria → Acidobacteria768Open in IMG/M
3300010037|Ga0126304_10123518All Organisms → cellular organisms → Bacteria → Acidobacteria1656Open in IMG/M
3300010041|Ga0126312_11331411All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300010397|Ga0134124_10081706All Organisms → cellular organisms → Bacteria2778Open in IMG/M
3300010400|Ga0134122_12193272All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium596Open in IMG/M
3300010401|Ga0134121_13303675All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300011332|Ga0126317_10738923All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium611Open in IMG/M
3300011332|Ga0126317_10763392All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium643Open in IMG/M
3300011333|Ga0127502_10083283All Organisms → cellular organisms → Bacteria731Open in IMG/M
3300011333|Ga0127502_10557442All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter lipolyticus885Open in IMG/M
3300011333|Ga0127502_10620935All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium648Open in IMG/M
3300011333|Ga0127502_10714951All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter lipolyticus775Open in IMG/M
3300011333|Ga0127502_10728901All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter lipolyticus776Open in IMG/M
3300011333|Ga0127502_10924432All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium509Open in IMG/M
3300011333|Ga0127502_11312388All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium867Open in IMG/M
3300013100|Ga0157373_10347431All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter lipolyticus1058Open in IMG/M
3300013307|Ga0157372_10975274All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium982Open in IMG/M
3300013307|Ga0157372_12066228All Organisms → cellular organisms → Bacteria → Acidobacteria655Open in IMG/M
3300013308|Ga0157375_11916174All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium704Open in IMG/M
3300013308|Ga0157375_13054063All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium559Open in IMG/M
3300014745|Ga0157377_10721734All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium726Open in IMG/M
3300015374|Ga0132255_101994133All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium883Open in IMG/M
3300018422|Ga0190265_10257600All Organisms → cellular organisms → Bacteria1795Open in IMG/M
3300018422|Ga0190265_11808736All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium719Open in IMG/M
3300020063|Ga0180118_1161793All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter lipolyticus749Open in IMG/M
3300025904|Ga0207647_10571883All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300025907|Ga0207645_10227501All Organisms → cellular organisms → Bacteria1230Open in IMG/M
3300025917|Ga0207660_10104527All Organisms → cellular organisms → Bacteria2121Open in IMG/M
3300025917|Ga0207660_11477042All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium550Open in IMG/M
3300025918|Ga0207662_10188584All Organisms → cellular organisms → Bacteria → Acidobacteria1330Open in IMG/M
3300025918|Ga0207662_10925087All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300025920|Ga0207649_10425856All Organisms → cellular organisms → Bacteria → Acidobacteria997Open in IMG/M
3300025923|Ga0207681_10135503All Organisms → cellular organisms → Bacteria1827Open in IMG/M
3300025925|Ga0207650_11161293All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium657Open in IMG/M
3300025926|Ga0207659_10394064All Organisms → cellular organisms → Bacteria → Acidobacteria1157Open in IMG/M
3300025933|Ga0207706_11682979All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium511Open in IMG/M
3300025941|Ga0207711_10636808All Organisms → cellular organisms → Bacteria → Acidobacteria995Open in IMG/M
3300025961|Ga0207712_10499695All Organisms → cellular organisms → Bacteria → Acidobacteria1039Open in IMG/M
3300025981|Ga0207640_10021160All Organisms → cellular organisms → Bacteria3872Open in IMG/M
3300025981|Ga0207640_12113195All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium511Open in IMG/M
3300026035|Ga0207703_12409224All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300026088|Ga0207641_12558317All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium508Open in IMG/M
3300026095|Ga0207676_11137787All Organisms → cellular organisms → Bacteria772Open in IMG/M
3300026116|Ga0207674_10598161All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1065Open in IMG/M
3300026116|Ga0207674_11669356All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium605Open in IMG/M
3300026118|Ga0207675_100054501All Organisms → cellular organisms → Bacteria → Proteobacteria3730Open in IMG/M
3300027637|Ga0209818_1000022All Organisms → cellular organisms → Bacteria38824Open in IMG/M
3300027637|Ga0209818_1025896All Organisms → cellular organisms → Bacteria1307Open in IMG/M
3300027639|Ga0209387_1000632All Organisms → cellular organisms → Bacteria8830Open in IMG/M
3300027639|Ga0209387_1232460Not Available519Open in IMG/M
3300027691|Ga0209485_1000006All Organisms → cellular organisms → Bacteria143181Open in IMG/M
3300027691|Ga0209485_1002452All Organisms → cellular organisms → Bacteria → Acidobacteria3843Open in IMG/M
3300027691|Ga0209485_1052465All Organisms → cellular organisms → Bacteria1050Open in IMG/M
3300027873|Ga0209814_10245650All Organisms → cellular organisms → Bacteria776Open in IMG/M
3300027886|Ga0209486_10022666All Organisms → cellular organisms → Bacteria2953Open in IMG/M
3300027909|Ga0209382_10047974All Organisms → cellular organisms → Bacteria5097Open in IMG/M
3300028380|Ga0268265_10019130All Organisms → cellular organisms → Bacteria → Acidobacteria4754Open in IMG/M
3300030619|Ga0268386_10001845All Organisms → cellular organisms → Bacteria → Proteobacteria14772Open in IMG/M
3300031455|Ga0307505_10041689All Organisms → cellular organisms → Bacteria → Acidobacteria2051Open in IMG/M
3300031854|Ga0310904_10366456All Organisms → cellular organisms → Bacteria934Open in IMG/M
3300032002|Ga0307416_102869068All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium577Open in IMG/M
3300032157|Ga0315912_10041975All Organisms → cellular organisms → Bacteria3640Open in IMG/M
3300034479|Ga0314785_006888All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium775Open in IMG/M
3300034479|Ga0314785_011149All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium655Open in IMG/M
3300034479|Ga0314785_015370All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium589Open in IMG/M
3300034479|Ga0314785_015895All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium584Open in IMG/M
3300034479|Ga0314785_019267All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300034480|Ga0314789_011035All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium742Open in IMG/M
3300034480|Ga0314789_027040All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium546Open in IMG/M
3300034659|Ga0314780_062872All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300034659|Ga0314780_091615All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium680Open in IMG/M
3300034659|Ga0314780_114075All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium630Open in IMG/M
3300034659|Ga0314780_205335All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium517Open in IMG/M
3300034660|Ga0314781_075829All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium643Open in IMG/M
3300034661|Ga0314782_048222All Organisms → cellular organisms → Bacteria840Open in IMG/M
3300034662|Ga0314783_025316All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium990Open in IMG/M
3300034662|Ga0314783_074334All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium684Open in IMG/M
3300034662|Ga0314783_080919All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium664Open in IMG/M
3300034663|Ga0314784_039604All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium825Open in IMG/M
3300034663|Ga0314784_048426All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter pelagius772Open in IMG/M
3300034663|Ga0314784_057356All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium728Open in IMG/M
3300034663|Ga0314784_135501All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium545Open in IMG/M
3300034664|Ga0314786_024356All Organisms → cellular organisms → Bacteria996Open in IMG/M
3300034664|Ga0314786_050173All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter pelagius785Open in IMG/M
3300034664|Ga0314786_068189All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter pelagius709Open in IMG/M
3300034665|Ga0314787_033096All Organisms → cellular organisms → Bacteria793Open in IMG/M
3300034665|Ga0314787_034881All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter pelagius779Open in IMG/M
3300034666|Ga0314788_131448All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300034667|Ga0314792_110497All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium695Open in IMG/M
3300034668|Ga0314793_043316All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium802Open in IMG/M
3300034670|Ga0314795_024586All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium938Open in IMG/M
3300034671|Ga0314796_051736All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium785Open in IMG/M
3300034671|Ga0314796_052658All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium781Open in IMG/M
3300034671|Ga0314796_063596All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium732Open in IMG/M
3300034671|Ga0314796_097616All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300034674|Ga0314799_024889All Organisms → cellular organisms → Bacteria652Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil22.64%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil10.69%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.29%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil5.66%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil5.03%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere5.03%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere5.03%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.14%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil3.14%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.14%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere3.14%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.52%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.52%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.89%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.89%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.89%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.26%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.26%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.26%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.63%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.63%
Termite NestEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest0.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.63%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.63%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.63%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated0.63%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.63%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.63%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.63%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.63%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.63%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.63%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.63%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2001200001Soil microbial communities from Waseca County, Minnesota, USA - Sample 10150EnvironmentalOpen in IMG/M
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300003267Sugarcane bulk soil Sample L1EnvironmentalOpen in IMG/M
3300003319Sugarcane bulk soil Sample L2EnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004798Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006169Termite nest microbial communities from Madurai, IndiaEnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011332Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300011333Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300020063Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT730_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027637Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027639Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)EnvironmentalOpen in IMG/M
3300027691Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300030619Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)EnvironmentalOpen in IMG/M
3300031455Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_SEnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032157Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soilEnvironmentalOpen in IMG/M
3300034479Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034480Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034659Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034660Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034661Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034662Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034663Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034664Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034665Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034666Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034667Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034668Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034670Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034671Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034674Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R3 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
20012389172001200001SoilMLVILCPFLALAVLVSIKSAGIRNNDVLLLLLTLSGAVLSGINGFGRRTAKSVPLSTVRATCAGDDSRGRIPLSAHSQQ
20012563182001200001SoilMKANTTRNLTSVVMLVILSPFLALAILVSIKTAGIQDNEVLLLMLTLSSAVLSGINGFGRRTVTSVPLTAPMRARATQAGKKPSQGRISLSAHSQQ
F14TC_10057058653300000559SoilMLAVLSPFLALAILVSVKTAGIIENNVLLVLLTLLSAVLSGVNGFGRRTANAMPLVPVRTKSNGDGLSSVTWSTRQRTNA*
JGI10214J12806_1010090613300000891SoilMHVAKQHCLASTGEQTNLMKSNTTKNLASVVMLVILSPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTATSIPLST
soilL1_1000005053300003267Sugarcane Root And Bulk SoilMKSNTTKNLASVVMLVILSPFLALAILVSIKTAGIRDNEVLLVLLTLFSAVLSGINGFGRRTAKSLPLSSVRATCAGDDASQGRIPLSAHSQQ*
soilL1_1005615823300003267Sugarcane Root And Bulk SoilMLVILSPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTAQSVPLSSVRATCAGDEASQGRIPLSAHSQQ*
soilL2_1000687443300003319Sugarcane Root And Bulk SoilMLVILSPFLALAILVSIKTAGIKDNEVLLLLLTLSSAVLSGINGFGRRTANPAPLSTVRATCAGDDSSRGGIPLSAHSQQ*
soilL2_1002813523300003319Sugarcane Root And Bulk SoilMLVILSPFLALAILVSIKTAGIRDNEVLLVLLTLFSAVLSGINGFGRRTAKSLPLSSVRATCAGDDASQGRIPLSAHSQQ*
soilH2_1001058213300003324Sugarcane Root And Bulk SoilMKSNTTRNLASVVMLVILSPFLALAILVSIKTAGIKDNEVLLLLLTLSSAVLSGINGFGRRTANPAPLSTVRATCAGDDSSRGGIPLSAHSQQ*
Ga0062593_10044509423300004114SoilMLVILSPLLALATLVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTVKPVPLTVPITQAGKNPSRGRIP
Ga0062589_10004335023300004156SoilMLVILSPFLALAMLVSIKTAGIRNNEVLLLLLTLSSAVLSGINGFGRRTVTSIPLTAPITQAGKNPSQGRIPLSAHSQQ*
Ga0062595_10087149323300004479SoilMKSNTTRNLTSVVMLVILFPFLALAILVSIKTAGIRNNDVLLLLLTLSSAVLSGINGFGRRTAKSVPLSTVRATCAGDDSRGRIPLSAHSQQ*
Ga0062592_10175322113300004480SoilMLAILTPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTARSLSLSSVRATCAGDDPSQGRIPLSAHSQQ*
Ga0058859_1171002623300004798Host-AssociatedEQTNLMKSNTTRNLASVVMLVILTPILALAILVSIKTAGIRDNEVLLLLLTLASAVLSGVNGFGRRTAMSAPLSTVRATCAGDDPSQGRIPLSAHSQQ*
Ga0062594_10002127523300005093SoilMKSNTTRNLASVVMLVILTPILALAILVSIKTAGIRDNEVLLLLLTLASAVLSGVNGFGRRTAMSAPLSTVRATCAGDDPSQGRIPLSAHSQQ*
Ga0062594_10040644913300005093SoilMLVAKQHCLASTGEQTNLMKSNTTRNLTSVVMLVILFPFLALAILVSIKTAGIRNNDVLLLLLTLSSAVLSGINGFGRRTAKSVPLSTVRATCAGDDSRGRIPLSAHSQQ*
Ga0065704_1055452813300005289Switchgrass RhizosphereMKANTTRNLTSVVMLVILSPFLALATLVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTVKSIPLTAPITQAG
Ga0065715_1009478713300005293Miscanthus RhizosphereMKSNTTRNLTSVVMLVILFPFLALAILVSIKTAGIRNNDVLLLLLTLSSAVLSGINGFGRRTAKSVPLSTVRATCAGDDSRGRIPLSAHSQ
Ga0065707_1081526813300005295Switchgrass RhizosphereNLMKANTTRNLTSVVMLVILSPFLALATLVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTVKSIPLTAPITQAGKNPSRGRIPLSAHSQQ*
Ga0070676_1087447513300005328Miscanthus RhizosphereMKSNTTRNLASVVMLVILSPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTAQSIPLSSVRATCAGDDASEGRIPLSAHSQQ*
Ga0066388_10388225213300005332Tropical Forest SoilPFLALAILVSIKTAGIKDNEVLLLVLTLTSAVLSGINGFGRRTANPVPLSTARATCAGDESSRGRIPLSAHSQQ*
Ga0070677_1066375613300005333Miscanthus RhizosphereAILVSIKTAGIRDNEVLLLLLTLASAVLSGVNGFGRRTAMSAPLSTVRATCAGDDPSQGRIPLSAHSQQ*
Ga0070666_1060530623300005335Switchgrass RhizosphereNICLASTGEQTNLMKSNTTRNLASVVMLVILTPILALAILVSIKTAGIRDNEVLLLLLTLASAVLSGVNGFGRRTAMSAPLSTVRATCAGDDPSQGRIPLSAHSQQ*
Ga0070680_10029448923300005336Corn RhizosphereMLVILTPILALAILVSIKTAGIRDNEVLLLLLTLASAVLSGVNGFGRRTAMSAPLSTVRATCAGDDPSQGRIPLSAHSQQ*
Ga0070691_1036815623300005341Corn, Switchgrass And Miscanthus RhizosphereMLVILTPILALAILVSIKTAGIRDNEVLLLLLTLASAVLSGVNGFGRRTAMSAPLSTVRATCAGDDPSQGRIP
Ga0070691_1102298613300005341Corn, Switchgrass And Miscanthus RhizosphereMLVILSPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTAQSIPLSSVRATCAGDDASEGRIPLSAHSQQ*
Ga0070675_10074167323300005354Miscanthus RhizosphereMLVILTPFLALALLVSIKTAGIRDNEVLLLLLTLASAVLSGINGFGRRTAMSVPLSTVRATCAGD
Ga0070659_10067954823300005366Corn RhizosphereMKSNTTRNLTSVVMLVILFPFLALAILVSIKTAGIRNNDVLLLLLTLSSAVLSGINGFGRRTANAVPLSTVRATCAGDEPSRGRISLSAHSQQ*
Ga0070705_10010480513300005440Corn, Switchgrass And Miscanthus RhizosphereMKSNTTRNLASVVMLVILTPILALAILVSIKTAGIRDNEVLLLLLTLASAVLSGVNGFGRRTAMSAPLSTVRATCAGDD
Ga0070694_10035139523300005444Corn, Switchgrass And Miscanthus RhizosphereMLVAKQHCLASTVEQTNLMKSNTTRNLASVVMLVILTPILALAILVSIKTAGIRDNEVLLLLLTLASAVLSGVNGFGRRTAMSAPLSTVRATCAGDDPSQGRIPLSAHSQQ*
Ga0070678_10037398613300005456Miscanthus RhizosphereNLASVVMLVILTPILALAILVSIKTAGIRDNEVLLLLLTLASAVLSGVNGFGRRTAMSAPLSTVRATCAGDDPSQGRIPLSAHSQQ*
Ga0070662_10014348213300005457Corn RhizosphereEQTNLMKSNTTRNLTSVVMLVILFPFLALAILVSIKTAGIRNNDVLLLLLTLSSAVLSGINGFGRRTAKSVPLSTVRATCAGDDPSQGRIPLSAHSQQ*
Ga0070704_10015494713300005549Corn, Switchgrass And Miscanthus RhizosphereMLAILTPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTARSLPLSSVRATCAGDDPSQGRIPLSAHSQQ*
Ga0068857_10025793323300005577Corn RhizosphereMLVILFPFLALAILVSIKTAGIRNNDVLLLLLTLSSAVLSGINGFGRRTANPAPLSTVRATCAGDEPSQGGIPLSAHSQQ*
Ga0068857_10251437423300005577Corn RhizosphereMLVAKQQRIASTVEQTNLMKANTKKNMASAVMLVILSPFLALAILVSIKALGIRNNEALLLVLTLLSAVLSGINGFGRRTATAVQLS
Ga0068852_10240345523300005616Corn RhizospherePILALAILVSIKTAGIRDNEVLLLLLTLASAVLSGVNGFGRRTAMSAPLSTVRATCAGDDPSQGRIPLSAHSQQ*
Ga0068861_10223344313300005719Switchgrass RhizosphereASTVEQTNLMKSNTTRNLASVVMLVILTPFLALAILVSIKTAGIRDNEVLLLLLTLASAVLSGINGFGRRTAMSVPLSTVRATCAGDDPSQGRIPLSAHSQQ*
Ga0068870_1033598433300005840Miscanthus RhizosphereNCRVDKHLMKSNTTRNLASVVMLAILTPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTARSLSLSSVRATCAGDDPSQGRIPLSAHSQQ*
Ga0068863_10235772313300005841Switchgrass RhizosphereMLVILSPFLALAMLVSIKTAGIRNNEVLLLLLTLSSAVLSGINGFGRRTVTSIPLTAPITQAGKNPS
Ga0068860_10022325413300005843Switchgrass RhizosphereVAKQHCLASTVEQTNLMKSNTTRNLASVVMLVILTPILALAILVSIKTAGIRDNEVLLLLLTLASAVLSGVNGFGRRTAMSAPLSTVRATCAGDDPSQGRIPLSAHSQQ*
Ga0082029_117159813300006169Termite NestMLVAKQHCVASTVEQTKHLMKSNTTKNLASVVMLVILSPFLALAILVSIKTAGIKDNEVLLVLLTLSSAVLSGINGFGRRTAKSLPLSSVRATCAGDDASQGRIPLSAHSQQ*
Ga0075428_10093342433300006844Populus RhizosphereGEQTNLMKSNTTRNLASAVMLVILSPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTATSLPLSSVRATCAGDDASQGRIPLSAHSQQ*
Ga0075428_10178927613300006844Populus RhizosphereMLVILSPILALAILVSIKTAGIKDNEVLLLLLTLSSAVLSGINGFGRRTANPVPLSTVRATCAGDDPSRGRIPLSAHSQQ*
Ga0075421_10011524823300006845Populus RhizosphereMKANTTRNLTSVVMLVILSPFLALAMLVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTVTSVPLTAPITQAGKNPSQGRISLSAHSQQ*
Ga0075421_10136237933300006845Populus RhizosphereLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTARPAPLSSVRATCAGDDPSQGRIPLSAHSQQ*
Ga0075421_10179423113300006845Populus RhizosphereMVVAKQLCLASTGEQTNLMKANTTRNLTSVVMLVILSPFLALAILVSIKTAGIQDNEVLLLMLTLSSAVLSGINGFGRRTVTSVPLTAPITQAGKKPSQGRIS
Ga0079217_1005167813300006876Agricultural SoilMKSNTTRNLTSVVMLVILSPLLALAILVSIKTAGIRDNDVLLLLLTLSGAVFSGINGFGRRTAASIPLATVRATCAGHDSRGRIPLSAHSQQ*
Ga0079217_1010405933300006876Agricultural SoilMLVILSPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTATSLPLSSVRATCAGDDASQGRI
Ga0079217_1011538513300006876Agricultural SoilMLVILSPFLALAILVSIKTAGIQDNEVLLLLLTLSSAVLSGINGFGRRTATSLPLSSVRATCAGDDASQGRI
Ga0079215_1000081513300006894Agricultural SoilMKSNTTRNLASAVMLVILSPFLALAILVSIKTAGIQDNEVLLLLLTLSSAVLSGINGFGRRTATSLPLSSVRATCAGDDASQGRI
Ga0079215_1000616313300006894Agricultural SoilMKSNTTRNLASVVMLVILSPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTATSLPLSSVRATCAGDDASQGRI
Ga0079215_1002239613300006894Agricultural SoilMKSNTTRNLTSVVMLVILSPLLALAILVSIKTAGIRDNEVLLLLLTLSGAVFSGINGFGRRTAASIPLATVRATCAGHDSRGRIPLSAHSQQ*
Ga0079215_1130041413300006894Agricultural SoilVMLVILSPFLALAVLISIKSAGIRDNEVLLVLLTLSSAVLSGINGFGRRTVTAIPSAVRATCAGDETSKGRIPLSAHSQQ*
Ga0079219_1011389933300006954Agricultural SoilMLVILFPFLALAILVSIKTAGIRNNDVLLLLLTLSSAVLSGINGFGRRTANPAPLSTVRATCAGDEPSRGRIPLSAHSQQ*
Ga0079218_1377560713300007004Agricultural SoilMKSNTTRNLASVVMLVILFPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTARAIPLSAVRATCAGDDRSQGGIPLSAHSQQ*
Ga0075418_1206214823300009100Populus RhizosphereMLVAKQLCVASTVEQTNTFMKSNTTKNLASVVMLAILTPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTARPLSLSSVRATGAGNDPS
Ga0114129_1017134423300009147Populus RhizosphereMLVAKQLCVASTVEQTNTFMKSNTTKNLASVVMLAILTPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTARSLSLSSVRATCAGDDPSQGRIPLSAHSQQ*
Ga0114129_1028891733300009147Populus RhizosphereMLVAKQYCVAATVEQTNLMKSNTTRNLASVVMLVILSPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTARPAPLSSVRATCAGDDPSQGRIPLSAHSQQ*
Ga0105243_1285591323300009148Miscanthus RhizosphereSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTAASIPLSTARATCAGRDSSRGRIPLSAHSQQ*
Ga0105241_1175269613300009174Corn RhizosphereMLAILTPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTAKSVPLSTVRATCAGDDSRGRIPLSAHSQQ*
Ga0105241_1269281323300009174Corn RhizosphereAMLVSIKTAGIRNNEVLLLLLTLSSAVLSGINGFGRRTVTSIPLTAPITQAGKNPSQGRIPLSAHSQQ*
Ga0105248_1072742723300009177Switchgrass RhizosphereMKANTTRNLTSVVMLVILSPFLALATLVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTVRPVPLTVPITQAGKNPSRGRIPLSAHSQQ*
Ga0105249_1141338423300009553Switchgrass RhizosphereMLVAKQHCIASTGEQTNLMKSNTTRNLTSVVMLVILFPFLALAILVSIKTAGIRNNDVLLLLLTLSSAVLSGINGFGRRTAKSVPLSTVRATCA
Ga0126304_1012351833300010037Serpentine SoilMLVILTPFLALAILVSIKTAGIRDNEVLLLLLTLSSAALSGINGFGRRTPTTVPLSTVRSSDVHPSQARIHLSARSSNNA*
Ga0126312_1133141113300010041Serpentine SoilKANTTRNLTSVVMLVILSPFLALAMLVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTVTSVHLTGPITQAGKNPSAGRIRLSAHSQQ*
Ga0134124_1008170653300010397Terrestrial SoilMLVILFPFLALAILVSIKTAGIRNNDVLLLLLTLSSAVLSGINGFGRRTAKSVPLSTVRATCAGDDSRGRIPLSAHSQQ*
Ga0134122_1219327213300010400Terrestrial SoilTNTFMKSNTTKNLASVVMLAILTPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTARSLPLSSVRATCAGDDASEGRIPLSAHSQQ*
Ga0134121_1330367513300010401Terrestrial SoilVIVLFVAKQHCLASTVEQTNLMKSNTTRNLASVVMLVILTPILALAILVSIKTAGIRDNEVLLLLLTLASAVLIGVNGFGRRTAMSAPLSTVRATCAGDDPSQGRIPLSAHSQQ*
Ga0126317_1073892323300011332SoilMLVILSPFLALAMLVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTARPVPLTVPITQAGKNPSQGRIPLSAHSQQ*
Ga0126317_1076339223300011332SoilNICLASTGEQTNLMKSNTTRNLASVVMLVILSPILALAILVSIKTAGIKDNEVLLLLLTLSSAVLSGINGFGRRTANPVPIATVRATCAGDDSRGRIRLSAHSQQ*
Ga0127502_1008328333300011333SoilALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTVTSLPLSSVRATCAGDDASQGRIPLSAHSQQ*
Ga0127502_1055744213300011333SoilQHCLASTVEQTNLMKSNTTRNLASVVMLAILTPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTARSLPLSSARATCAGDDPSQGRIPLSAHSQQ*
Ga0127502_1062093513300011333SoilLASTGEQTNLMKSNTTRNLASVVMLVILSPILALAILVSIKTAGIQDNEVLLLLLTLSSAVLSGINGFGRRTATAIPLSTVRATCAGDDPSRGRIPLSAHSQQ*
Ga0127502_1071495133300011333SoilVASTDEQTNLMKANTTRNLTSVVMLVILSPFLALAMLVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTVTSVPLTAPITQAGKNPSQGGISLSAHSQQ*
Ga0127502_1072890113300011333SoilMLVILSPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTVTSVPLTAPITSAGKDPSQGRIPLSAHSQQ*
Ga0127502_1092443213300011333SoilSKFASRQLSSRRNLMKSNTTKNLASVVMLVILTPFLALAILVSIKTAGIRDNAVLLLLLTLSSAVLSGINGFGRRTATSVPLSSVRATCAGDDPSQGRIPLSAHSQQ*
Ga0127502_1131238833300011333SoilLASTGEQTNLMKSNTTRNMASVVMLVILTPLLALAFLVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTAASIPLSTRRATCAGSDRS*
Ga0157373_1034743133300013100Corn RhizosphereMKSNTTKNLASVVMLAILTPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTAQSIPLSSVRATCAGDDASEGRIPLSAHSQQ*
Ga0157372_1097527423300013307Corn RhizosphereMKSNTTKNLASVVMLVILSPFLALAILVSIKTAGIRDKEVLLVLLTLFSAVLSGVNGFGRRTAKSLPLSSVRATCAGDDASQGRIPLSAHSQQ*
Ga0157372_1206622823300013307Corn RhizosphereMLVAKQHCLASTGEQTNLMKSNTTRNLTSVVMLVILFPFLALAILVSIKTAGIRNNDVLLLLLTLSSAVLSGINGFGRRTA
Ga0157375_1191617423300013308Miscanthus RhizosphereMLVILSPFLALAMLVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTVRPVPLTVPITQAGKNPSQGRIPLSAHSQQ*
Ga0157375_1305406313300013308Miscanthus RhizosphereRNLTSVVMLAITTPLLALSILVSIKIAGIRDNEFLLVLLTLSSAVLSGINGFGRRTAKSVPLSTVRATCAGDDSRGRIPLSAHSQQ*
Ga0157377_1072173413300014745Miscanthus RhizosphereMLVILTPILALAILVSIKTAGIRDNEVLLLLLTLASAVLSGINGFGRRTAMSVPLSTVRATCAGDDPSQGRIPLSAHSQQ*
Ga0132255_10199413323300015374Arabidopsis RhizosphereMKANTTRNLTSVVMLVILSPFLALATLVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTVKSVPLTAPITQAGKNPSRGRIPLSAHSQQ*
Ga0190265_1025760043300018422SoilMKSNTTRNLASVVMLVILSPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTATSLPLSSVRATCAGDEASQGRIPLSAHSQQ
Ga0190265_1180873613300018422SoilMKSNTTRNLASVVMLVILSPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTATSLPLSPVRTTCAGDDASQGRIPLSAHSQQ
Ga0180118_116179313300020063Groundwater SedimentCLASTGEQTNLMKTNTTRNLTSVVMLVILSPFLALAMLVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTATSVPLTAPITQAGKNPSQGRIPLSAHSQQ
Ga0207647_1057188323300025904Corn RhizosphereMKSNTTRNLASVVMLVILTPILALAILVSIKTAGIRDNEVLLLLLTLASAVLSGVNGFGRRTAMSAPLSTVRATCAGDDPSQGRIPLSAHSQQ
Ga0207645_1022750123300025907Miscanthus RhizosphereMKSNTTRNLASVVMLVILSPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTAQSIPLSSVRATCAGDDASEGRIPLSAHSQQ
Ga0207660_1010452723300025917Corn RhizosphereMLVILTPILALAILVSIKTAGIRDNEVLLLLLTLASAVLSGVNGFGRRTAMSAPLSTVRATCAGDDPSQGRIPLSAHSQQ
Ga0207660_1147704223300025917Corn RhizosphereFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTAQSIPLSSVRATCAGDDASEGRIPLSAHSQQ
Ga0207662_1018858423300025918Switchgrass RhizosphereMKSNTTRNLTSVVMLVILFPFLALAILVSIKTAGIRNNDVLLLLLTLSSAVLSGINGFGRRTAKSVPLSTVRATCAGDD
Ga0207662_1092508723300025918Switchgrass RhizosphereASTVEQTNLMKSNTTRNLASVVMLVILTPILALAILVSIKTAGIRDNEVLLLLLTLASAVLSGVNGFGRRTAMSAPLSTVRATCAGDDPSQGRIPLSAHSQQ
Ga0207649_1042585623300025920Corn RhizosphereMLVAKQHCLASTGEQTNLMKSNTTRNLTSVVMLVILFPFLALAILVSIKTAGIRNNDVLLLLLTLSSAVLSGINGFGRR
Ga0207681_1013550343300025923Switchgrass RhizosphereMKSNTTRNLASVVMLVILTPFLALAILVSIKTAGIRDNEVLLLLLTLASAVLSGVNGFGRRTAMSAPLSTVRATCAGDDSRGRIPLSAHSQQ
Ga0207650_1116129313300025925Switchgrass RhizosphereVMLVILSPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTAKSLPLSAVRATCAGDDPSQGRIPLSAHSQQ
Ga0207659_1039406423300025926Miscanthus RhizosphereMLVAKQHCLASTGEQTNLMKSNTTRNLTSVVMLVILFPFLALAILVSIKTAGIRNNDVLLLLLTLSSAVLSGINGFGRRTAKSVPLSTVRATCAGDDSRGRIPLSAHSQQ
Ga0207706_1168297913300025933Corn RhizosphereMLVAKQHCLASTGEQTNLMKSNTTRNLTSVVMLVILFPFLALAILVSIKTAGIRNNDVLLLLLTLSSAVLSGINGFGRRTAKSVPLSTVRATCAG
Ga0207711_1063680813300025941Switchgrass RhizosphereMKANTTRNLTSVVMLVILSPFLALATLVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTVRPVPLTVPITQAGKNPSRGRIPLSAHSQ
Ga0207712_1049969513300025961Switchgrass RhizosphereMKSNTTRNLTSVVMLVILFPFLALAILVSIKTAGIRNNDVLLLLLTLSSAVLSGINGFGRRTAKSVPLSTVRATCA
Ga0207640_1002116053300025981Corn RhizosphereRRQHFASHQLGEQTNLMKSNTTRNLASVVMLVILTPILALAILVSIKTAGIRDNEVLLLLLTLASAVLSGVNGFGRRTAMSAPLSTVRATCAGDDPSQGRIPLSAHSQQ
Ga0207640_1211319513300025981Corn RhizosphereMLVLLFPFLALAILISIKTAGIRNNDVLLLLLTLSSAVLSGINGFGRRTAKSVPLSTVRATCAGDDSRGRIPLSAHSQQ
Ga0207703_1240922413300026035Switchgrass RhizosphereSVVMLVILTPILALAILVSIKTAGIRDNEVLLLLLTLASAVLSGVNGFGRRTAMSAPLSTVRATCAGDDPSQGRIPLSAHSQQ
Ga0207641_1255831713300026088Switchgrass RhizosphereICLASTGEQTNLMKSNTTRNLTSVVMLVILFPFLALAILVSIKTAGIRNNDVLLLLLTLSSAVLSGINGFGRRTAKSVPLSTVRATCAGDDSRGRIPLSAHSQQ
Ga0207676_1113778723300026095Switchgrass RhizosphereMLVILSPFLALAMLVSIKTAGIRNNEVLLLLLTLSSAVLSGINGFGRRTVTSIPLTAPITQAGKNPSQGRIPLSAHSQQ
Ga0207674_1059816123300026116Corn RhizosphereMKSNTTRNLASVVMLAILTPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTARSLSLSSVRATCAGDDPSQGRIPLSAHSQQ
Ga0207674_1166935613300026116Corn RhizosphereMLVILSPFLALAMLVSIKTAGIRNNEVLLLLLTLSSAVLSGINGFGRRTAKLVPLTAPITQAGKYPSKGRIPLSAHSQQ
Ga0207675_10005450123300026118Switchgrass RhizosphereMKSNTTRNLASVVMLVILTPILALAILVSIKTAGIRDNEVLLLLLTLASAVLSGINGFGRRTAMSVPLSTVRATCAGDDPSQGRIPLSAHSQQ
Ga0209818_1000022133300027637Agricultural SoilMKSNTTRNLASAVMLVILSPFLALAILVSIKTAGIQDNEVLLLLLTLSSAVLSGINGFGRRTATSLPLSSVRATCAGDDASQGRIPLSAHSQQ
Ga0209818_102589613300027637Agricultural SoilMLVILSPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTATSLPLSSVRATCAGDDASQGRIP
Ga0209387_1000632103300027639Agricultural SoilMKSNTTRNLASVVMLVILSPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTATSLPLSSVRATCAGDDASQGRIPLSAHSQQ
Ga0209387_123246013300027639Agricultural SoilMLVILSPLLALAILVSIKTAGIRDNEVLLLLLTLSGAVFSGINGFGRRTAASIPLATVRATCAGHDSRGRIPLSAHSQQ
Ga0209485_1000006423300027691Agricultural SoilMLVILSPFLALAILVSIKTAGIQDNEVLLLLLTLSSAVLSGINGFGRRTATSLPLSSVRATCAGDDASQGRIPLSAHSQQ
Ga0209485_100245263300027691Agricultural SoilMKSNTTRNLASVVMLVILSPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTATSLPLSSVRATCAGDDASQGRIP
Ga0209485_105246533300027691Agricultural SoilVHREQHCLASTVEQTNLMKSNTTRNLTSVVMLVILSPLLALAILVSIKTAGIRDNEVLLLLLTLSGAVFSGINGFGRRTAASIPLATVRATCAGHDSRGRIPLSAHSQQ
Ga0209814_1024565013300027873Populus RhizosphereVILVARQTSIALTVGQTNPMKANTTKNLASVVTLAILSPFLALAILASIKTAGIRNNDVLLLMLTLLSAVLSGINGFGRRTATPVPLSSVRATCAGDDPSQGRIPLSAHSQQ
Ga0209486_1002266653300027886Agricultural SoilMKSNTTRNLTSVVMLVILSPLLALAILVSIKTAGIRDNEVLLLLLTLSGAVFSGINGFGRRTAASIPLATVRATCAGHDSRGRIPLSAHSQQ
Ga0209382_1004797453300027909Populus RhizosphereMKANTTRNLTSVVMLVILSPFLALAMLVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTVTSVPLTAPITQAGKNPSQGRISLSAHSQQ
Ga0268265_1001913063300028380Switchgrass RhizosphereMKSNTTRNLASVVMLVILTPFLALAILVSIKTAGIRDNEVLLLLLTLASAVLSGVNGFGRRTAMSAPLSTVRATCAGDDPSQGRIPLSAHSQQ
Ga0268386_1000184523300030619SoilMLVAKQHCIASLVEQTNLMKANTTRNLTSVVMLVILSPFLALAMLVSIKTAGIRGNEVLLLLLTLSSAVLSGINGFGRRTPTTVPLSTVRARGDNPSQARIPVRSFEQ
Ga0307505_1004168943300031455SoilMLVILSPFLALAMLVSIKTAGIRDNAVLLLLLTLSSAVLSGINGFGRRTAKAVPLTAPITSAGKNSSGRIPLSAHSQQ
Ga0310904_1036645623300031854SoilMKSNTTRNLASVVMLVTPILALAILVSIKTAGIRDNEVLLLLLTLASAVLSGVNGFGRRTAMSAPLSTVRATCAGDDPSQGRIPLSAHSQQ
Ga0307416_10286906813300032002RhizosphereMLVAKQHCLASTGEQTNLMKTNTTRNLASVVMLVILSPFLALAILVSIKTAGIKDNEVLLLLLTLSSAVLSGINGFGRRTATSIPLAAVRATCAGDDSRGRIPLSAHSQQ
Ga0315912_1004197523300032157SoilMKANTTRNLTSVVMLVILSPFLALAIMVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTVTSVPLTAPITSAGKNTSQGRIPLSAHSQQ
Ga0314785_006888_462_7403300034479SoilMKANTTRNLTSVVMLVILSPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTATPVPITAPITSAGNNPSQGRIPLSAHSQQ
Ga0314785_011149_43_3213300034479SoilMKANTTRNLTSVVMLVILSPFLALATLVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTVRPVPLTVPITQAGKNPSRGRIPLSAHSQQ
Ga0314785_015370_310_5883300034479SoilMKANTTRNLTSVVMLVILSPFLALAMVISIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTAKLVPLTAPITQAGKYPSKGRIPLSAHSQQ
Ga0314785_015895_285_5633300034479SoilMKANTTRNLTSVVMLVILSPFLALAMLVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTARPVPLTAPITQARKNPSQGRIPLSAHSQQ
Ga0314785_019267_43_3213300034479SoilMKSNTTKNLASVVMLVILSPFLALAVLISIKTAGIRDNEVLLVLLTLSSAVLSGINGFGRRTVTAIPSAVRATCAGNEASKGRIPLSAHSQQ
Ga0314789_011035_87_3263300034480SoilMLVILSPILALAILVSIKTAGIKDNEVLLLLLTLSSAVLSGINGFGRRTANFVPISTVRATCAGDDSRGRIPLSAHSQQ
Ga0314789_027040_8_2863300034480SoilMKANTTRNLTSVVMLVILSPFLALATLVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTVKPVPLTVPITQAGKNPSRGRIPLSAHSQQ
Ga0314780_062872_73_3153300034659SoilMLVILSPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTAKSLPLSAVRATCAGDDPSQGRIPLSAHSQQ
Ga0314780_091615_364_6033300034659SoilMLVILSPFLALAMLISIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTVKPGPVTAPITQAGSNPSQGCIPLSAHSQQ
Ga0314780_114075_339_6203300034659SoilMKSNTTKNLASVVMLVILSPFLALAILVSIKTAGIRDNEVLLLLLTLSGAVLSGINGFGRRTATSLPLSSVRATCAGDDPSQGRIPLSAHSQQ
Ga0314780_205335_81_3203300034659SoilMLVILFPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTATSIPLSPVRATCARDDSEGRIPLSAHSQQ
Ga0314781_075829_80_3223300034660SoilMLVILSPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTATSLPLSSVRATCAGDDASQGRIPLSAHSQQ
Ga0314782_048222_42_3203300034661SoilMKANTTRNLTSVVMLVILSPFLAPAMFVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTVTSVPLTAPITQAGKNPSQGRISLSAHSQQ
Ga0314783_025316_70_3123300034662SoilMLIILSPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTATSLPLSSVRATCAGDDASRGRIPLSAHSQQ
Ga0314783_074334_365_6433300034662SoilMKANTTRNLTSAVMLLILSPFLLLAMLVSIQTSGIRDNEVLLLLLTLSSAVLSGINGFGRRTATAVPVTAPITQAGSNPSQGCIPLSAHSQQ
Ga0314783_080919_8_3253300034662SoilMPRIIWRADKYLMKSNTTKNMASVVMLVILSPFLALAFLVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTAKSLPLSAVRATCAGDDPSQGRIPLSAHSQQ
Ga0314784_039604_508_7263300034663SoilMALAILVSIKTAGIRDNEVLLLLLTLSGAVLSGINGFGRRTATSLPLSSVRVTCAGDDPSQGRIPLSAHSQQ
Ga0314784_048426_36_3143300034663SoilMKANTTRNLTSVVMLVILSPFLALAMVISIKTAGIRDNEVLLLLLTLSSAVLSGINGLGRRTVKPGPVTAPITQAGSNPSQGCIPLSAHSQQ
Ga0314784_057356_458_7003300034663SoilMLVILSPLLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTAASIPLSTVRATCAGDDPSRGRIPLSAHSQQ
Ga0314784_135501_80_3223300034663SoilMLVILFPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTARAIPLSAVRATSAGDDRSQGGIPLSAHSQQ
Ga0314786_024356_43_3213300034664SoilMKSNTTRNLTSVVMLVILFPFLALAVLISIKTAGIRDNEVLLVLLTLSSAVLSGINGFGRRTVTAIPSAVRATCAGNEASKGRIPLSAHSQQ
Ga0314786_050173_80_3223300034664SoilMLVILFPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTARAIPLSAVRATCAGDDRSQGGIPLSAYSQQ
Ga0314786_068189_19_2583300034664SoilMLVILSPFLALATLVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTVKSIPLTAPITQAGKKPSRGRIPLSAHSQQ
Ga0314787_033096_42_3203300034665SoilMKANTTRNLTSVVMLVILSPFLALTMLVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTVTSVPLTAPITQAGKNPSQGRISLSAHSQQ
Ga0314787_034881_40_3183300034665SoilMKANTTRNLTSAVMLLILSPFLLLAMLVSIQTSGIRDNEVLLLLLTLSSAVLSGINGFGRRTATAVPVTAPITQAGDNPSQGRIPMSAHSQQ
Ga0314788_131448_388_5913300034666SoilMVISIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTAKLVPLTAPITQAGKYPSKGRIPLSAHSQQ
Ga0314792_089955_1_1983300034667SoilVSIKTAGIRNNDVLLLLLTLSSAVLSGINGFGRRTAKSVPLSTVRATCAGDDSRGRIPLSAHSQQ
Ga0314792_110497_83_3253300034667SoilMLIILSPFLALAILVSIKSAGIRDNEVLLLLLTLSSAVLSGINGFGRRTATSLPLSSVRATCAGDDASRGRIPLSAHSQQ
Ga0314793_043316_32_3103300034668SoilMKANTTRNLTSVVMLVILSPLLALATLVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTVKPVPLTVPITQAGKNPSRGRIPLSAHSQQ
Ga0314795_024586_80_3193300034670SoilMLVILSPFLALAMLISIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTAKLVPLTAPITQAGKYPSKGRIPLSAHSQQ
Ga0314796_051736_38_3163300034671SoilMKSNTTRNLTSVVMLVILSPFLALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTATPVPITAPITSAGNNPSQGRIPLSAHSQQ
Ga0314796_052658_462_7403300034671SoilMKSNTTRNLTSVVMLVILFPFLAPAILVSIKTAGIRNNDVLLLLLTLSSAVLSGINGFGRRTAKSVPLSTVRATCAGDDSRGRIPLSAHSQQ
Ga0314796_063596_410_6523300034671SoilMLVILTPILALAILVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTARAIPLSAVRATCAGDDRSQGGIPLSAHSQQ
Ga0314796_097616_65_3043300034671SoilMLVILSPFLAPAMLVSIKTAGIRDNEVLLLLLTLSSAVLSGINGFGRRTVTSVPLTAPITQAGKNPSQGRISLSAHSQQ
Ga0314799_024889_423_6503300034674SoilLSPFLALAVLISIKTAGIRDNEVLLVLLTLSSAVLSGINGFGRRTVTAIPSAVRATCAGNEASKGRIPLSAHSQQ

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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