NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F042275

Metagenome / Metatranscriptome Family F042275

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F042275
Family Type Metagenome / Metatranscriptome
Number of Sequences 158
Average Sequence Length 44 residues
Representative Sequence MRTAITLSLPEPAYLRCLRVLGAWWCLGSSALQPQVLMRYEARP
Number of Associated Samples 103
Number of Associated Scaffolds 158

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 63.29 %
% of genes near scaffold ends (potentially truncated) 32.28 %
% of genes from short scaffolds (< 2000 bps) 60.13 %
Associated GOLD sequencing projects 80
AlphaFold2 3D model prediction Yes
3D model pTM-score0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(32.911 % of family members)
Environment Ontology (ENVO) Unclassified
(51.266 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(56.329 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 43.06%    β-sheet: 0.00%    Coil/Unstructured: 56.94%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 158 Family Scaffolds
PF14833NAD_binding_11 12.66
PF07732Cu-oxidase_3 12.03
PF07690MFS_1 11.39
PF00248Aldo_ket_red 4.43
PF02954HTH_8 2.53
PF09678Caa3_CtaG 1.90
PF13590DUF4136 1.90
PF00355Rieske 1.27
PF07995GSDH 1.27
PF02518HATPase_c 1.27
PF08447PAS_3 1.27
PF13267DUF4058 0.63
PF00582Usp 0.63
PF00873ACR_tran 0.63
PF00034Cytochrom_C 0.63
PF07681DoxX 0.63
PF03626COX4_pro 0.63
PF13354Beta-lactamase2 0.63
PF06912DUF1275 0.63
PF00115COX1 0.63
PF07731Cu-oxidase_2 0.63
PF12270Cyt_c_ox_IV 0.63
PF16955OFeT_1 0.63
PF00069Pkinase 0.63
PF00510COX3 0.63
PF13442Cytochrome_CBB3 0.63
PF00116COX2 0.63
PF08530PepX_C 0.63
PF01527HTH_Tnp_1 0.63
PF01844HNH 0.63
PF07885Ion_trans_2 0.63
PF08808RES 0.63

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 158 Family Scaffolds
COG2132Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)Cell cycle control, cell division, chromosome partitioning [D] 12.66
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 2.53
COG2133Glucose/arabinose dehydrogenase, beta-propeller foldCarbohydrate transport and metabolism [G] 1.27
COG1622Heme/copper-type cytochrome/quinol oxidase, subunit 2Energy production and conversion [C] 0.63
COG1845Heme/copper-type cytochrome/quinol oxidase, subunit 3Energy production and conversion [C] 0.63
COG2259Uncharacterized membrane protein YphA, DoxX/SURF4 familyFunction unknown [S] 0.63
COG2936Predicted acyl esteraseGeneral function prediction only [R] 0.63
COG3125Heme/copper-type cytochrome/quinol oxidase, subunit 4Energy production and conversion [C] 0.63
COG3619Uncharacterized membrane protein YoaK, UPF0700 familyFunction unknown [S] 0.63
COG4263Nitrous oxide reductaseInorganic ion transport and metabolism [P] 0.63
COG4270Uncharacterized membrane proteinFunction unknown [S] 0.63
COG5654Predicted toxin component of a toxin-antitoxin system, contains RES domainDefense mechanisms [V] 0.63

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001661|JGI12053J15887_10058840All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2139Open in IMG/M
3300001661|JGI12053J15887_10167853All Organisms → cellular organisms → Bacteria1139Open in IMG/M
3300002557|JGI25381J37097_1008120All Organisms → cellular organisms → Bacteria1860Open in IMG/M
3300002558|JGI25385J37094_10066100All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1169Open in IMG/M
3300002558|JGI25385J37094_10085424All Organisms → cellular organisms → Bacteria968Open in IMG/M
3300002560|JGI25383J37093_10016417All Organisms → cellular organisms → Bacteria2463Open in IMG/M
3300002560|JGI25383J37093_10057807All Organisms → cellular organisms → Bacteria1234Open in IMG/M
3300002561|JGI25384J37096_10004265All Organisms → cellular organisms → Bacteria → Proteobacteria5158Open in IMG/M
3300002562|JGI25382J37095_10003799All Organisms → cellular organisms → Bacteria → Proteobacteria5160Open in IMG/M
3300002562|JGI25382J37095_10016240All Organisms → cellular organisms → Bacteria2850Open in IMG/M
3300002907|JGI25613J43889_10072658All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium929Open in IMG/M
3300002908|JGI25382J43887_10010909All Organisms → cellular organisms → Bacteria → Proteobacteria4612Open in IMG/M
3300002908|JGI25382J43887_10013063All Organisms → cellular organisms → Bacteria4288Open in IMG/M
3300002908|JGI25382J43887_10077013All Organisms → cellular organisms → Bacteria1798Open in IMG/M
3300002908|JGI25382J43887_10432870All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300002908|JGI25382J43887_10448521All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium546Open in IMG/M
3300002909|JGI25388J43891_1010801All Organisms → cellular organisms → Bacteria1712Open in IMG/M
3300002912|JGI25386J43895_10009702All Organisms → cellular organisms → Bacteria2732Open in IMG/M
3300002912|JGI25386J43895_10048674All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1222Open in IMG/M
3300005174|Ga0066680_10010761All Organisms → cellular organisms → Bacteria4691Open in IMG/M
3300005174|Ga0066680_10221934All Organisms → cellular organisms → Bacteria1197Open in IMG/M
3300005176|Ga0066679_10174299All Organisms → cellular organisms → Bacteria1359Open in IMG/M
3300005176|Ga0066679_10177400All Organisms → cellular organisms → Bacteria1348Open in IMG/M
3300005176|Ga0066679_10303903All Organisms → cellular organisms → Bacteria1038Open in IMG/M
3300005181|Ga0066678_11082113All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium516Open in IMG/M
3300005187|Ga0066675_10561488All Organisms → cellular organisms → Bacteria857Open in IMG/M
3300005406|Ga0070703_10317621All Organisms → cellular organisms → Bacteria655Open in IMG/M
3300005440|Ga0070705_100965433All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium689Open in IMG/M
3300005444|Ga0070694_100011678All Organisms → cellular organisms → Bacteria → Proteobacteria5442Open in IMG/M
3300005444|Ga0070694_100215870All Organisms → cellular organisms → Bacteria → Proteobacteria1437Open in IMG/M
3300005444|Ga0070694_100786620All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium779Open in IMG/M
3300005446|Ga0066686_10014586All Organisms → cellular organisms → Bacteria4221Open in IMG/M
3300005447|Ga0066689_10182487All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1265Open in IMG/M
3300005468|Ga0070707_100019966All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae6317Open in IMG/M
3300005536|Ga0070697_100273836All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1447Open in IMG/M
3300005549|Ga0070704_102286437All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300005554|Ga0066661_10004464All Organisms → cellular organisms → Bacteria6398Open in IMG/M
3300005554|Ga0066661_10395399All Organisms → cellular organisms → Bacteria846Open in IMG/M
3300005555|Ga0066692_10618246All Organisms → cellular organisms → Bacteria678Open in IMG/M
3300005557|Ga0066704_10184800All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1406Open in IMG/M
3300005557|Ga0066704_10677345All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium652Open in IMG/M
3300005561|Ga0066699_10083297All Organisms → cellular organisms → Bacteria2068Open in IMG/M
3300005568|Ga0066703_10364151All Organisms → cellular organisms → Bacteria867Open in IMG/M
3300005586|Ga0066691_10365793All Organisms → cellular organisms → Bacteria854Open in IMG/M
3300006032|Ga0066696_10606818All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium710Open in IMG/M
3300006046|Ga0066652_100946341All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium820Open in IMG/M
3300006755|Ga0079222_10088756All Organisms → cellular organisms → Bacteria1586Open in IMG/M
3300006797|Ga0066659_10148282All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1665Open in IMG/M
3300006804|Ga0079221_11542125All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium535Open in IMG/M
3300006852|Ga0075433_10063793All Organisms → cellular organisms → Bacteria3228Open in IMG/M
3300006904|Ga0075424_100663205All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1114Open in IMG/M
3300007255|Ga0099791_10111970All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1261Open in IMG/M
3300007258|Ga0099793_10122918All Organisms → cellular organisms → Bacteria1215Open in IMG/M
3300007258|Ga0099793_10196645All Organisms → cellular organisms → Bacteria966Open in IMG/M
3300007265|Ga0099794_10093202All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1497Open in IMG/M
3300007265|Ga0099794_10595715All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium585Open in IMG/M
3300009088|Ga0099830_10020252All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium4317Open in IMG/M
3300009088|Ga0099830_10126857All Organisms → cellular organisms → Bacteria1937Open in IMG/M
3300009088|Ga0099830_10290850All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1302Open in IMG/M
3300009088|Ga0099830_11437209All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium574Open in IMG/M
3300009089|Ga0099828_10085039All Organisms → cellular organisms → Bacteria2708Open in IMG/M
3300009089|Ga0099828_10127801All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2228Open in IMG/M
3300009090|Ga0099827_10002885All Organisms → cellular organisms → Bacteria → Proteobacteria9664Open in IMG/M
3300009090|Ga0099827_10014340All Organisms → cellular organisms → Bacteria5267Open in IMG/M
3300009090|Ga0099827_10044380All Organisms → cellular organisms → Bacteria3307Open in IMG/M
3300009090|Ga0099827_10078700All Organisms → cellular organisms → Bacteria2567Open in IMG/M
3300009090|Ga0099827_10740041All Organisms → cellular organisms → Bacteria850Open in IMG/M
3300009137|Ga0066709_100311638All Organisms → cellular organisms → Bacteria2143Open in IMG/M
3300009137|Ga0066709_100332418All Organisms → cellular organisms → Bacteria2079Open in IMG/M
3300009137|Ga0066709_101646209All Organisms → cellular organisms → Bacteria915Open in IMG/M
3300010303|Ga0134082_10148885All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium945Open in IMG/M
3300010304|Ga0134088_10062754All Organisms → cellular organisms → Bacteria1718Open in IMG/M
3300010336|Ga0134071_10400490All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium699Open in IMG/M
3300010396|Ga0134126_10521905All Organisms → cellular organisms → Bacteria1366Open in IMG/M
3300011269|Ga0137392_10088970All Organisms → cellular organisms → Bacteria2412Open in IMG/M
3300011271|Ga0137393_10005680All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales8250Open in IMG/M
3300011271|Ga0137393_10019407All Organisms → cellular organisms → Bacteria4933Open in IMG/M
3300012096|Ga0137389_10003126All Organisms → cellular organisms → Bacteria10212Open in IMG/M
3300012200|Ga0137382_10721449All Organisms → cellular organisms → Bacteria715Open in IMG/M
3300012202|Ga0137363_10011734All Organisms → cellular organisms → Bacteria → Proteobacteria5621Open in IMG/M
3300012203|Ga0137399_10027578All Organisms → cellular organisms → Bacteria → Proteobacteria3854Open in IMG/M
3300012203|Ga0137399_10383451All Organisms → cellular organisms → Bacteria1171Open in IMG/M
3300012203|Ga0137399_10580294All Organisms → cellular organisms → Bacteria942Open in IMG/M
3300012209|Ga0137379_11269665All Organisms → cellular organisms → Bacteria643Open in IMG/M
3300012351|Ga0137386_10649538All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium759Open in IMG/M
3300012351|Ga0137386_10849197All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300012362|Ga0137361_10011001All Organisms → cellular organisms → Bacteria6481Open in IMG/M
3300012396|Ga0134057_1169835All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium681Open in IMG/M
3300012922|Ga0137394_10059989All Organisms → cellular organisms → Bacteria → Proteobacteria3152Open in IMG/M
3300012922|Ga0137394_10839882All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium768Open in IMG/M
3300012925|Ga0137419_10003433All Organisms → cellular organisms → Bacteria7541Open in IMG/M
3300012925|Ga0137419_10357460All Organisms → cellular organisms → Bacteria1131Open in IMG/M
3300012927|Ga0137416_10248505All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_65_71452Open in IMG/M
3300012929|Ga0137404_10250514All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1520Open in IMG/M
3300012930|Ga0137407_10127673All Organisms → cellular organisms → Bacteria2217Open in IMG/M
3300012976|Ga0134076_10289765All Organisms → cellular organisms → Bacteria707Open in IMG/M
3300012976|Ga0134076_10441784All Organisms → cellular organisms → Bacteria586Open in IMG/M
3300015241|Ga0137418_10012439All Organisms → cellular organisms → Bacteria7854Open in IMG/M
3300017659|Ga0134083_10516840All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300018431|Ga0066655_10002624All Organisms → cellular organisms → Bacteria6851Open in IMG/M
3300018431|Ga0066655_10430931All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium870Open in IMG/M
3300018433|Ga0066667_10418478All Organisms → cellular organisms → Bacteria1088Open in IMG/M
3300018468|Ga0066662_10289175All Organisms → cellular organisms → Bacteria1368Open in IMG/M
3300018468|Ga0066662_10933740All Organisms → cellular organisms → Bacteria854Open in IMG/M
3300018468|Ga0066662_12955524All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium505Open in IMG/M
3300020004|Ga0193755_1114902All Organisms → cellular organisms → Bacteria843Open in IMG/M
3300021046|Ga0215015_10101283All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2561Open in IMG/M
3300021086|Ga0179596_10010041All Organisms → cellular organisms → Bacteria3067Open in IMG/M
3300021307|Ga0179585_1158541All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium689Open in IMG/M
3300024330|Ga0137417_1133574All Organisms → cellular organisms → Bacteria4023Open in IMG/M
3300025910|Ga0207684_10904072All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium742Open in IMG/M
3300025910|Ga0207684_11295308All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300025922|Ga0207646_10004965All Organisms → cellular organisms → Bacteria14213Open in IMG/M
3300026277|Ga0209350_1079202All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium889Open in IMG/M
3300026295|Ga0209234_1032298All Organisms → cellular organisms → Bacteria1990Open in IMG/M
3300026296|Ga0209235_1000321All Organisms → cellular organisms → Bacteria23395Open in IMG/M
3300026296|Ga0209235_1004634All Organisms → cellular organisms → Bacteria7686Open in IMG/M
3300026296|Ga0209235_1047224All Organisms → cellular organisms → Bacteria2097Open in IMG/M
3300026297|Ga0209237_1011984All Organisms → cellular organisms → Bacteria5138Open in IMG/M
3300026297|Ga0209237_1027130All Organisms → cellular organisms → Bacteria3175Open in IMG/M
3300026297|Ga0209237_1038209All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2539Open in IMG/M
3300026297|Ga0209237_1040014All Organisms → cellular organisms → Bacteria2461Open in IMG/M
3300026298|Ga0209236_1284899All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium534Open in IMG/M
3300026301|Ga0209238_1088207All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1068Open in IMG/M
3300026309|Ga0209055_1012757All Organisms → cellular organisms → Bacteria → Proteobacteria4316Open in IMG/M
3300026309|Ga0209055_1037286All Organisms → cellular organisms → Bacteria2175Open in IMG/M
3300026313|Ga0209761_1295853All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium567Open in IMG/M
3300026317|Ga0209154_1108664All Organisms → cellular organisms → Bacteria1178Open in IMG/M
3300026318|Ga0209471_1007100All Organisms → cellular organisms → Bacteria6014Open in IMG/M
3300026325|Ga0209152_10170273All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium819Open in IMG/M
3300026328|Ga0209802_1063266All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1774Open in IMG/M
3300026328|Ga0209802_1257779All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300026332|Ga0209803_1075324All Organisms → cellular organisms → Bacteria1423Open in IMG/M
3300026334|Ga0209377_1029142All Organisms → cellular organisms → Bacteria2668Open in IMG/M
3300026334|Ga0209377_1052185All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1824Open in IMG/M
3300026335|Ga0209804_1243422All Organisms → cellular organisms → Bacteria687Open in IMG/M
3300026524|Ga0209690_1017040All Organisms → cellular organisms → Bacteria3739Open in IMG/M
3300026532|Ga0209160_1273455All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium573Open in IMG/M
3300026551|Ga0209648_10099019All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2392Open in IMG/M
3300026551|Ga0209648_10447863All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium804Open in IMG/M
3300027383|Ga0209213_1097299All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium545Open in IMG/M
3300027655|Ga0209388_1001331All Organisms → cellular organisms → Bacteria5786Open in IMG/M
3300027748|Ga0209689_1378463All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300027787|Ga0209074_10374497All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium590Open in IMG/M
3300027862|Ga0209701_10009283All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium6408Open in IMG/M
3300027862|Ga0209701_10071009All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2204Open in IMG/M
3300027862|Ga0209701_10180317All Organisms → cellular organisms → Bacteria1271Open in IMG/M
3300027875|Ga0209283_10012329All Organisms → cellular organisms → Bacteria5096Open in IMG/M
3300027882|Ga0209590_10000571All Organisms → cellular organisms → Bacteria12392Open in IMG/M
3300027882|Ga0209590_10005069All Organisms → cellular organisms → Bacteria5672Open in IMG/M
3300027882|Ga0209590_10058672All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2175Open in IMG/M
3300027882|Ga0209590_10116054All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_65_71621Open in IMG/M
3300028536|Ga0137415_10025974All Organisms → cellular organisms → Bacteria5779Open in IMG/M
3300028536|Ga0137415_10029947All Organisms → cellular organisms → Bacteria → Proteobacteria5360Open in IMG/M
3300028536|Ga0137415_10202876All Organisms → cellular organisms → Bacteria1802Open in IMG/M
3300031962|Ga0307479_10114064All Organisms → cellular organisms → Bacteria2631Open in IMG/M
3300032180|Ga0307471_104266175All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium505Open in IMG/M
3300032205|Ga0307472_100775865All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium872Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil32.91%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil25.32%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil21.52%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.96%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil4.43%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.90%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.90%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.27%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.27%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.63%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300002557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cmEnvironmentalOpen in IMG/M
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300002560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cmEnvironmentalOpen in IMG/M
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300002562Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002907Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cmEnvironmentalOpen in IMG/M
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002909Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cmEnvironmentalOpen in IMG/M
3300002912Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cmEnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012396Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300021046Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depthEnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021307Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_06_16RNAfungal (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026277Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026297Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026309Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)EnvironmentalOpen in IMG/M
3300026313Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300026328Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)EnvironmentalOpen in IMG/M
3300026524Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)EnvironmentalOpen in IMG/M
3300026532Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027383Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12053J15887_1005884043300001661Forest SoilMLQPATITLSVQLPQSVYLLRLRVLGAWWRLGSSAIEPRLLAEY
JGI12053J15887_1016785313300001661Forest SoilMRTAITLCLPEPAYLRCLRVLGAWWCLGSSGLEPQVLMRYEVRP*
JGI25381J37097_100812023300002557Grasslands SoilMRTTITVSLPETAYLRCLRVLAAWWCLGSSALQPQVLMRYGAHP*
JGI25385J37094_1006610023300002558Grasslands SoilMNTTITLRVPEPTYLRCLRVLGAWWCLGSSTLQPQVLTQYGGRP*
JGI25385J37094_1008542423300002558Grasslands SoilMRATITLSLPEPIYLRCLRVLGAWWCLGSSALQPSVLTRYEARP*
JGI25383J37093_1001641733300002560Grasslands SoilMRATITVNLHEPAYLRCLRVLGAWWCLGSSALQPQLLTQYEARP*
JGI25383J37093_1005780723300002560Grasslands SoilMRTTITVSLPETAYLRCLRVLAAWWCLGSSALQPVVLMRYEGRP*
JGI25384J37096_1000426553300002561Grasslands SoilMTTALTLTLPELAYLRCLRVLAAWWCLGSSAVQPQLLMRYEVRP*
JGI25382J37095_1000379923300002562Grasslands SoilMNTTITLRVPEPTYLRCLRVLGAWWCLGSSTLQPQVLTQYGGRS*
JGI25382J37095_1001624043300002562Grasslands SoilMTTAMTLTMPEPEYLRCLRVLAAWWCLGSXAVQPRVLVRYKVRP*
JGI25613J43889_1007265833300002907Grasslands SoilNTTITLSVPEPTYLRCLRVLGAWWCLGSSTLQPQVLTPYGGRS*
JGI25382J43887_1001090943300002908Grasslands SoilMNTTITLRXPEPTYLRCLRVLGAWWCLGSSTLQPQVLTQYGGRS*
JGI25382J43887_1001306363300002908Grasslands SoilMRTTITLSLPETAYLRCLRVLAAWWCLGSSALQPQLLMRYGAQP*
JGI25382J43887_1007701323300002908Grasslands SoilMRTTIALSLPETAYLRCLRVLAAWWCLGSSALQPQLLMRYG
JGI25382J43887_1043287033300002908Grasslands SoilMETAITLTLPELAYLRCLRVLAAWWNLGSSGVQPRMLVQY
JGI25382J43887_1044852113300002908Grasslands SoilTAITLTLPEFAYLRCLRVLAAWWNLGSSGVQPRMLVQYEVRP*
JGI25388J43891_101080113300002909Grasslands SoilMTTVIALSLPEPAYLRCLRVLAAWWCLGSSGVQPQVLMRSGVGS*
JGI25386J43895_1000970213300002912Grasslands SoilMNTTITLRMPEPTYLRCLRVLGAWWCLGSSTLQPQVLTQYGGRP*
JGI25386J43895_1004867423300002912Grasslands SoilMTLTMPEPEYLRCLRVLAAWWCLGSSAVQPRVLVRYKVRP*
Ga0066680_1001076163300005174SoilMRTTITVSLPETAYLRCLRVLAAWWCLGSSALQPQVLMRYGAQP*
Ga0066680_1022193423300005174SoilMTTAMTLTLPEPAYLRCLRVLAAWWCLGSSAVQPQVLMRYEVRP*
Ga0066679_1017429923300005176SoilMTTALTLTLPEPAYLRYLRVLAAWWCLGSSAVQPQLLIRYEVRP*
Ga0066679_1017740013300005176SoilMRTTITVSLPETAYLRCLRVLAAWWCLGSSALQPQVLMRYGA
Ga0066679_1030390323300005176SoilMTTAIALTLPEPAYLRRLRVLAAWWCLGSSVLEPQLLMRYEVHR*
Ga0066678_1108211313300005181SoilMETAITLTLPELAYLRCLRVLAAWWNLGSSGVQPRMLVQYEVRP*
Ga0066675_1056148823300005187SoilMRTTITLSLPETAYLRCLRVLAAWWCLGSSALQPQVLMRYGAQGAQP*
Ga0070703_1031762123300005406Corn, Switchgrass And Miscanthus RhizosphereMTTALTFSVPEATYLRCLRVLAAWWCLGSSKLEPQVLTRYEVQP*
Ga0070705_10096543323300005440Corn, Switchgrass And Miscanthus RhizosphereMSTTLALSLPELAYLRCLRVLGAWWCLGSSRLEPHVLTQYEARP*
Ga0070694_10001167863300005444Corn, Switchgrass And Miscanthus RhizosphereMRTTITLSLPEPAYLRCLRVLGAWWCLGSSMLQPQVLMWYEERP*
Ga0070694_10021587013300005444Corn, Switchgrass And Miscanthus RhizosphereLTFSVPEATYLRCLRVLAAWWCLGSSKLEPQVLTRYEVQP*
Ga0070694_10078662023300005444Corn, Switchgrass And Miscanthus RhizosphereVNSMSTTLALSLPELAYLRCLRVLGAWWCLGSSRLEPHVLTQYEARP*
Ga0066686_1001458623300005446SoilMTTAITLTLPELAYLRCLRVLAAWWNLGSSGVQPRMLVQYEVRP*
Ga0066689_1018248723300005447SoilMTTAMTLTLPEPAYLRCLRVLAAWWCLGSSAVQPQVLMRYEVGP*
Ga0070707_10001996663300005468Corn, Switchgrass And Miscanthus RhizosphereGSARGSPPVNSMSTTLALSLPELAYLRCLRVLGAWWCLGSSRLEPHVLTQYEARP*
Ga0070697_10027383633300005536Corn, Switchgrass And Miscanthus RhizospherePVNSMSTTLALSLPELAYLRCLRVLGAWWCLGSSRLEPHVLTQYEARP*
Ga0070704_10228643723300005549Corn, Switchgrass And Miscanthus RhizosphereRTTITLSLPEPAYLRCLRVLGAWWCLGSSMLQPQVLMWYEERP*
Ga0066661_1000446463300005554SoilMTTAMTLTLPEPAYLRCLRVLAAWWCLGSSAVQPQLLMRYEVRP*
Ga0066661_1039539913300005554SoilAMTTAMTLTLPEPAYLRCLRVLAAWWCLGSSAVQPQVLMRYEVRP*
Ga0066692_1061824623300005555SoilTAITLTLPELAYLRCLRVLAAWWNLGSSGVQPRMLVQYEVRP*
Ga0066704_1018480013300005557SoilVWHAECKGNRAMTTAMTLTLPEPAYLRCLRVLAAWWCLGSSAVQPQVLMRYEVRP*
Ga0066704_1067734513300005557SoilMTTAITLTLPELAYLRCLRVLAAWWNLGSSGVQPRMLVQYEV
Ga0066699_1008329713300005561SoilMTTAMTLTLPEPAYLRCLRILAAWWCLGSSAVQPQLLMRYEVRP*
Ga0066703_1036415113300005568SoilSVMRTTITVSLPETAYLRCLRVLAAWWCLGSSALQPQVLMRYGAHP*
Ga0066691_1036579313300005586SoilKGNRAMTTAMTLTLPEPAYLRCLRVLAAWWCLGSSAVQPQVLMRYEVRP*
Ga0066696_1060681813300006032SoilVMTTALTLTLPEPAYLRYLRVLAAWWCLGSSAVQPQLLIRYEVRP*
Ga0066652_10094634123300006046SoilMTTALTLTLPEPAYLRYLRVLAAWWCLGSSAVQPQLLIRYKVRP*
Ga0079222_1008875623300006755Agricultural SoilMNSVIALSLPESAYLRCLRVLAAWWCLGSSQLQPQVLMRYEAHP*
Ga0066659_1014828253300006797SoilITVSLPETAYLRCLRVLAAWWCLGSSALQPQVLMRYGAHP*
Ga0079221_1154212523300006804Agricultural SoilMITVIALSFPEPAYLRCLRVLAAWWCLGSSSLQPQLIMRYGARP*
Ga0075433_1006379323300006852Populus RhizosphereMTTALTFSVPEATYLRCLRVLGAWWCLGSSKLQPQVLTRYEVQP*
Ga0075424_10066320513300006904Populus RhizosphereTALTFSVPEATYLRCLRVLGAWWCLGSSKLQPQVLTRYEVQP*
Ga0099791_1011197043300007255Vadose Zone SoilVPEPTYLRCLRVLGAWWCLGSSTLQPQLLTQYGERS*
Ga0099793_1012291813300007258Vadose Zone SoilMRITITLSLAEPAYLRCLRVLGAWWWLGSSSVQPRLLAEYGVRS*
Ga0099793_1019664523300007258Vadose Zone SoilMNTTITLSVPEPTYLRCLRVLGAWWCLGSSALQPQVLTQYGGRS*
Ga0099794_1009320223300007265Vadose Zone SoilMRTATTLTLPEPAYLRYLRVLGAWWCLGSSAVGPRVLMAYVARS*
Ga0099794_1059571513300007265Vadose Zone SoilTHNSMNTTITLRVPEPTYLRCLRVLGAWWCLGSSTLQPQVLTQYGGRP*
Ga0099830_1002025213300009088Vadose Zone SoilMRTAITLTLPEPAYLRCLRVLGAWWCLGSSGLQPPVL
Ga0099830_1012685713300009088Vadose Zone SoilRGSAPVTVTLSLPELAYPRCLRVLGAWWCLGSSGLQPYLLTQYEARP*
Ga0099830_1029085013300009088Vadose Zone SoilTGRRGDHAMRTAITLTLPEPAYLRCLRVLGAWWCLGSSGLQPRVLMPYVARP*
Ga0099830_1143720923300009088Vadose Zone SoilMTTAITLSLPEPAYLRCLRVLAAWWCLGSSALQPQVLMRYEAQP*
Ga0099828_1008503933300009089Vadose Zone SoilMTTAITLSLPEPAYLRYLRVLAAWWCLGSSALEPQVLMRYEAQP*
Ga0099828_1012780143300009089Vadose Zone SoilVTVTLSLPELAYLRCLRVLGAWWCLGSSGLQPYLLTQYEARP*
Ga0099827_1000288583300009090Vadose Zone SoilMITVSLPETAYLRCLRVLAAWWCLGSSALQPQVLMRYGAHP*
Ga0099827_1001434073300009090Vadose Zone SoilMTTAITLSLPEPAYLRYLRVLAAWWCLGSSALQPQVLMRYEAQP*
Ga0099827_1004438043300009090Vadose Zone SoilMSTTITLSLPEPAYLRCLRVLGAWWCLGSSTLQPQLLTQYGARP*
Ga0099827_1007870023300009090Vadose Zone SoilMRTAITLSLPEPAYLRCLRVLGAWWCLGSSALQPQVLMRYEARP*
Ga0099827_1074004113300009090Vadose Zone SoilTTVITLSLPEPAYLRRLRVLAAWWCLGSSALQPQVLVRYGANR*
Ga0066709_10031163833300009137Grasslands SoilMTTAMTLTLPELAYLRCLRVLAAWWCLGSSAVQPQVLMRYEVRP*
Ga0066709_10033241833300009137Grasslands SoilMTAAITLRLPEPSYLRCLRVLAAWWCLGSSALEPQVLMRYKAQP*
Ga0066709_10164620923300009137Grasslands SoilMRTTITVSLPETAYLRCLRVLAAWWCLGSSVLQPVVLMRYEGRP*
Ga0134082_1014888523300010303Grasslands SoilMTTALTLTLPEPAYLRYLRVLAAWWCLGSSAVQPQVLMRYEVRP*
Ga0134088_1006275443300010304Grasslands SoilVPEPTYLRCLRVLGAWWCLGSSTLQPQVLTQYGGRP*
Ga0134071_1040049013300010336Grasslands SoilMTTAITFTLPEPAYLRRLRVLAAWWCLGSSALQPQVLMRYEVHS*
Ga0134126_1052190533300010396Terrestrial SoilMTTALTFSVPEATYLRCLRVLAAWWCLGSSKLQPQVLTRYGAHP*
Ga0137392_1008897023300011269Vadose Zone SoilMTTAITLSLPEPAYLRCLRVLAAWWCLGSSTLQPQVLMRYEAQP*
Ga0137393_1000568083300011271Vadose Zone SoilMRTAITLTLPEPAYLRCLRVLGVWWCLGSSGLQPLVLMPYVARP*
Ga0137393_1001940743300011271Vadose Zone SoilMRTAITLTLPEPAYLRCLRVLGAWWCLGSSGLQPRVLMPYVARP*
Ga0137389_1000312683300012096Vadose Zone SoilMRTAITLTLPEPAYLRCLRVLGAWWCLGSSGLQPLVLMPYVARP*
Ga0137382_1072144913300012200Vadose Zone SoilMTTVIALSLPEPAYLRCLRVLAAWWCLGSSGVQPQVLMRSGVG
Ga0137363_1001173413300012202Vadose Zone SoilVPEPTYLRCLRVLGAWWCLGSSTLQPQVLTPYGGRS*
Ga0137399_1002757863300012203Vadose Zone SoilMTTAMTSTLPEPAYLRCLRVLAAWWCLGSSAVQPQVLMRYEVRP*
Ga0137399_1038345123300012203Vadose Zone SoilMRTTITVSLPETTYLRCLRVLGAWWCLGSSALQPQVLMRYEAQP*
Ga0137399_1058029423300012203Vadose Zone SoilMETAITLTLPERAYLRCLRVLAAWWNLGSSGVQPRMLVQYEVRP*
Ga0137379_1126966523300012209Vadose Zone SoilMRTTITLSLPETAYLRCLRVLAAWWCLGSSALQPQVLMRYGAQP*
Ga0137386_1064953823300012351Vadose Zone SoilMRAAITLSLPECGYLRCLRVLGAWWCLGSSALQPRLLLQYEARP*
Ga0137386_1084919713300012351Vadose Zone SoilHGAMRAAITLSLPEPAYLRCLRVLGAWWCLGSSALQPRLLMQYEARP*
Ga0137361_1001100153300012362Vadose Zone SoilMNTTITLSVPEPTYLRCLRVLGAWWCLGSSTLQPQVLTPYGGRS*
Ga0134057_116983523300012396Grasslands SoilLPELAYLRCLRVLAAWWNLGSSGVQPRMLVQYEVRP*
Ga0137394_1005998973300012922Vadose Zone SoilAMRTTITVSLPETTYLRCLRVLGAWWCLGSSALQPQVLMRYEAQP*
Ga0137394_1083988213300012922Vadose Zone SoilRVPEPTYLRCLRVLGAWWCLGSSTLQPQVLTQYGGRS*
Ga0137419_1000343343300012925Vadose Zone SoilMNTTITLRVPERTYLRCLRVLGAWWCLGSSTLQPQVLTQYGGRS*
Ga0137419_1035746023300012925Vadose Zone SoilMRTTITLSLPEAAYLRCLRVLGAWWCLGSSVLQPQVLMRYEERP*
Ga0137416_1024850513300012927Vadose Zone SoilMNTTITLRVPEPTYLRCLRVLGAWWCLGSSTLQPQVLTQYGGR
Ga0137404_1025051423300012929Vadose Zone SoilMSTTIALSLPELAYLRCLRVLGAWWCLGSSRLEPHLLTQYEARP*
Ga0137407_1012767343300012930Vadose Zone SoilAMRTTITLSLSEPAYLRCLRILGAWWCLGSSALQPQVLMRYEARP*
Ga0134076_1028976513300012976Grasslands SoilMTTAITFTLPEPAYLRCLRVLAAWWCLGSSALQPVVLMRYEGRP*
Ga0134076_1044178423300012976Grasslands SoilMETAITLTLPELAYLRCLRVLAAWWNLGSSGVQPRMLVQYEVR
Ga0137418_1001243993300015241Vadose Zone SoilMRTTITLSLPEPAYLRCLRVLGAWWCLGSSMLQPQVLMRYEARP*
Ga0134083_1051684013300017659Grasslands SoilTITLSLPEPIYLRCLRVLGAWLCLGSSALQPSVLTRYEARP
Ga0066655_1000262483300018431Grasslands SoilMTTAITLTLPELAYLRCLRVLAAWWNLGSSGVQPRMLVQYEVRP
Ga0066655_1043093113300018431Grasslands SoilGAMRTAITLSLPECGYLRCLRVLGAWWCLGSSALQPRLLLQYEARP
Ga0066667_1041847813300018433Grasslands SoilMTAAITLRLPEPSYLRCLRVLAAWWCLGSSALEPQVLMRYKAQP
Ga0066662_1028917523300018468Grasslands SoilMTTALTLTLPEPAYLRYLRVLAAWWCLGSSAVQPQLLIRYEVRP
Ga0066662_1093374023300018468Grasslands SoilMRTTITVSLPETAYLRCLRVLAAWWCLGSSALQPQVLMRYGAHP
Ga0066662_1295552423300018468Grasslands SoilMRTTITLSLPETAYLRCLRVLAAWWCLGSSALQPQVLMRYGAQGAQP
Ga0193755_111490223300020004SoilMRTTITLSLPEPAYLRCLRVLGAWWCLGSSMLQPQVLMRYEEHP
Ga0215015_1010128323300021046SoilMRTATTLTLPEPAYLRYLRVLGAWWCLGSSAVGPRVLMAYVVRS
Ga0179596_1001004143300021086Vadose Zone SoilMNTTITLSVPEPTYLRCLRVLGAWWCLGSSTLQPQVLTPYGGRS
Ga0179585_115854113300021307Vadose Zone SoilITLCLPEPAYLRCLRVLGAWWCLGSSGLEPQVLMRYEVRP
Ga0137417_113357453300024330Vadose Zone SoilMNTTITLSVPEPTYLRCLRVLGAWWCLGSSALQPQVLTQYGGRS
Ga0207684_1090407223300025910Corn, Switchgrass And Miscanthus RhizosphereMSTTLALSLPELAYLRCLRVLGAWWCLGSSRLEPHVLTQYEARP
Ga0207684_1129530823300025910Corn, Switchgrass And Miscanthus RhizosphereTFSVPEATYLRCLRVLAAWWCLGSSKLEPQVLTRYEVQP
Ga0207646_10004965123300025922Corn, Switchgrass And Miscanthus RhizosphereVNSMSTTLALSLPELAYLRCLRVLGAWWCLGSSRLEPHVLTQYEARP
Ga0209350_107920223300026277Grasslands SoilMTTVIALSLPEPAYLRCLRVLAAWWCLGSSGVQPQVLMRSGVGS
Ga0209234_103229823300026295Grasslands SoilMTTVIALRLPEPAYLRCLRVLAAWWCLGSSGVQPQVLMRSGVDS
Ga0209235_1000321143300026296Grasslands SoilMTTALTLTLPELAYLRCLRVLAAWWCLGSSAVQPQLLMRYEVRP
Ga0209235_100463443300026296Grasslands SoilMNTTITLRMPEPTYLRCLRVLGAWWCLGSSTLQPQVLTQYGGRP
Ga0209235_104722423300026296Grasslands SoilMRTTITVSLPETAYLRCLRVLAAWWCLGSSALQPVVLMRYEGRP
Ga0209237_101198413300026297Grasslands SoilMETAITLTLPEFAYLRCLRVLAAWWNLGSSGVQPRMLVQYEVRP
Ga0209237_102713053300026297Grasslands SoilMTTAMTLTMPEPEYLRCLRVLAAWWCLGSSAVQPRVLVRYKVRP
Ga0209237_103820923300026297Grasslands SoilMETAITLTLPELAYLRCLRVLAAWWNLGSSGVQPRMLVQYEVRP
Ga0209237_104001423300026297Grasslands SoilMRATITLSLPEPIYLRCLRVLGAWWCLGSSALQPSVLTRYEARP
Ga0209236_128489913300026298Grasslands SoilPEPAYLRCLRVLAAWWCLGSSAVQPQVLMRYEVRP
Ga0209238_108820713300026301Grasslands SoilMTTAMTLTLPEPAYLRCLRVLAAWWCLGSSAVQPQVLMRYEVRP
Ga0209055_101275753300026309SoilMTTAIALTLPEPAYLRRLRVLAAWWCLGSSVLEPQLLMRYEVHR
Ga0209055_103728623300026309SoilMTTAMTLTLPEPAYLRCLRILAAWWCLGSSAVQPQLLMRYEVRP
Ga0209761_129585313300026313Grasslands SoilMTTAMTLTLPEPAYLRCLRVLAAWWCLGSSAEQPQVLMR
Ga0209154_110866433300026317SoilTTITVSLPETAYLRCLRVLAAWWCLGSSALQPQVLMRYGAQP
Ga0209471_100710023300026318SoilMRTTITVSLPETAYLRCLRVLAAWWCLGSSALQPQVLMRYGAQP
Ga0209152_1017027313300026325SoilMTTAMTLTLPEPAYLRCLRVLAAWWCLGSSAVQPQLLMRYEVRP
Ga0209802_106326633300026328SoilRTTITVSLPETAYLRCLRVLAAWWCLGSSALQPQVLMRYGAQGAQP
Ga0209802_125777923300026328SoilAMTTAMTLTLPEPAYLRCLRILAAWWCLGSSAVQPQLLMRYEVRP
Ga0209803_107532423300026332SoilMRATITLSVPEPIYLRCLRVLGAWWCLGSSALQLSLLT
Ga0209377_102914253300026334SoilMTTAITLTLPELAYLRCLRVLAAWWNLGSSGVQPRMLVQYEVR
Ga0209377_105218523300026334SoilMTTAMTLTLPEPAYLRCLRVLAAWWCLGSSAVQPQVLMRYEVGP
Ga0209804_124342223300026335SoilMTTVIALRLPEPAYLRCLRVLAAWWCLGSSGVQPQVLMR
Ga0209690_101704033300026524SoilMRATITVNLHEPAYLRCLRVLGAWWCLGSSALQPQLLTQYEARP
Ga0209160_127345523300026532SoilLSGDAMKATVTLSLPERVYLRCLRVLGAWWCLGSSALQPSLLTRYEARP
Ga0209648_1009901913300026551Grasslands SoilMRTATTLTLPEPAYLRYLRVLGAWWCLGSSAVGPRVLIAYVARS
Ga0209648_1044786323300026551Grasslands SoilMRTATTLTLPEPAYLRYLRVLGAWWCLGSSAVGPRVLMAYVARS
Ga0209213_109729923300027383Forest SoilMKTAIKLSLTADAYERCLRVLGAWWCLGSSGLEPQVLMRYEVRP
Ga0209388_100133153300027655Vadose Zone SoilMNTTITLRVPEPTYLRCLRVLGAWWCLGSSTLQPQLLTQYGERS
Ga0209689_137846313300027748SoilVWHAECKGNRAMTTAMTLTLPEPAYLRCLRVLAAWWCLGSSAVQPQVLMRYEVRP
Ga0209074_1037449723300027787Agricultural SoilMNSVIALSLPESAYLRCLRVLAAWWCLGSSQLQPQVLMRYEAHP
Ga0209701_1000928343300027862Vadose Zone SoilMRTAITLTLPEPAYLRCLRVLGAWWCLGSSGLQPRVLMPYVARP
Ga0209701_1007100933300027862Vadose Zone SoilMNTTITLRVPEPTYLRCLRVLGAWWCLGSSTLQPQVLTQYGGRP
Ga0209701_1018031733300027862Vadose Zone SoilMTTAITLSLPEPAYLRCLRVLAAWWCLGSSALQPQVLMRYEAQP
Ga0209283_1001232953300027875Vadose Zone SoilMRTAITLTLPEPAYLRCLRVLGAWWCLGSSGLQPLVLMPYVARP
Ga0209590_10000571113300027882Vadose Zone SoilMRTMITVSLPETAYLRCLRVLAAWWCLGSSALQPQVLMRYGAHP
Ga0209590_1000506973300027882Vadose Zone SoilMTTAITLSLPEPAYLRYLRVLAAWWCLGSSALQPQVLMRYEAQP
Ga0209590_1005867233300027882Vadose Zone SoilMNTPITLSLPEPVYLRCLRVLGAWWCLGSSALQPRLLTQYEARP
Ga0209590_1011605413300027882Vadose Zone SoilMNTTITLRVPEPTYLRCLRVLGAWWCLGSSTLQPQVLTQYGGRS
Ga0137415_1002597423300028536Vadose Zone SoilMNTTITLRVPERTYLRCLRVLGAWWCLGSSTLQPQVLTQYGGRS
Ga0137415_1002994773300028536Vadose Zone SoilMRTTITVSLPETTYLRCLRVLGAWWCLGSSALQPQVLMRYEAQP
Ga0137415_1020287633300028536Vadose Zone SoilMRTTITLSLPEAAYLRCLRVLGAWWCLGSSVLQPQVLMRYEERP
Ga0307479_1011406423300031962Hardwood Forest SoilMRTTIALSLPEPAYLRCLRVLGAWWCLGSSALPPQVLMRYEVQP
Ga0307471_10426617513300032180Hardwood Forest SoilVNSMSTTLALSLPELAYLRCLRVLGAWWCLGSSRLEPHLLTQYEARP
Ga0307472_10077586523300032205Hardwood Forest SoilMTTALTFSVPEATYLRCLRVLAAWWCLGSSKLEPQVLTRYEVQP

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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