Metagenome Family F042471

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F042471
Family Type	Metagenome
Number of Sequences	158
Average Sequence Length	47 residues
Representative Sequence	GGPGNSADIQLWTVSDGHGFQVLQFSKSFTAQHKDLFENTVTTEQSQ
Number of Associated Samples	117
Number of Associated Scaffolds	158

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	87.97 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (65.823 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere (6.962 % of family members)
Environment Ontology (ENVO)	Unclassified (39.241 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (56.329 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.33% β-sheet: 21.33% Coil/Unstructured: 61.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 158 Family Scaffolds
PF08309	LVIVD	4.43
PF04392	ABC_sub_bind	1.27
PF01738	DLH	1.27
PF14319	Zn_Tnp_IS91	1.27
PF03401	TctC	0.63
PF00072	Response_reg	0.63
PF02211	NHase_beta	0.63
PF02627	CMD	0.63
PF10634	Iron_transport	0.63
PF00034	Cytochrom_C	0.63
PF00078	RVT_1	0.63
PF00665	rve	0.63
PF02371	Transposase_20	0.63
PF13089	PP_kinase_N	0.63
PF00589	Phage_integrase	0.63
PF17210	SdrD_B	0.63
PF09996	DUF2237	0.63
PF07883	Cupin_2	0.63
PF13505	OMP_b-brl	0.63
PF03793	PASTA	0.63
PF13473	Cupredoxin_1	0.63

COG ID	Name	Functional Category	% Frequency in 158 Family Scaffolds
COG5276	Uncharacterized secreted protein, contains LVIVD repeats, choice-of-anchor domain	Function unknown [S]	4.43
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.27
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.63
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.63
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.63
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.63
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.63
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.63
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.63
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.82 %
Unclassified	root	N/A	34.18 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.82 %
Unclassified	root	N/A	34.18 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.82 %
Unclassified	root	N/A	34.18 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	50.00 %
Unclassified	root	N/A	34.18 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.18 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	14.56 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.16 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.90 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.18 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	13.92 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	3.16 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.27 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.18 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	13.29 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.16 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	1.27 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	0.63 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.18 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	13.29 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.16 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	1.27 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	0.63 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.18 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	13.29 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.16 %
unclassified Azospirillum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum	1.27 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	0.63 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.18 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	13.29 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.16 %
Azospirillum sp. TSO35-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. TSO35-2	1.27 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	0.63 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_112349009	Not Available	575	Open in IMG/M
3300002908\|JGI25382J43887_10129933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1301	Open in IMG/M
3300004463\|Ga0063356_102417754	All Organisms → cellular organisms → Bacteria → Proteobacteria	804	Open in IMG/M
3300004463\|Ga0063356_104544318	Not Available	597	Open in IMG/M
3300004633\|Ga0066395_10072957	Not Available	1586	Open in IMG/M
3300005176\|Ga0066679_11015773	Not Available	515	Open in IMG/M
3300005330\|Ga0070690_100796172	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300005334\|Ga0068869_101139103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	684	Open in IMG/M
3300005336\|Ga0070680_100868828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	778	Open in IMG/M
3300005338\|Ga0068868_101091577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	734	Open in IMG/M
3300005338\|Ga0068868_101406961	Not Available	651	Open in IMG/M
3300005344\|Ga0070661_100394782	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300005356\|Ga0070674_100812048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	808	Open in IMG/M
3300005364\|Ga0070673_100280903	Not Available	1460	Open in IMG/M
3300005366\|Ga0070659_100106534	Not Available	2260	Open in IMG/M
3300005439\|Ga0070711_100733417	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300005439\|Ga0070711_101888263	Not Available	525	Open in IMG/M
3300005445\|Ga0070708_100333445	Not Available	1429	Open in IMG/M
3300005445\|Ga0070708_101594871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	607	Open in IMG/M
3300005447\|Ga0066689_10067965	All Organisms → cellular organisms → Bacteria → Proteobacteria	1966	Open in IMG/M
3300005447\|Ga0066689_10229746	All Organisms → cellular organisms → Bacteria → Proteobacteria	1135	Open in IMG/M
3300005450\|Ga0066682_10197864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1287	Open in IMG/M
3300005456\|Ga0070678_101227445	All Organisms → cellular organisms → Bacteria → Proteobacteria	696	Open in IMG/M
3300005457\|Ga0070662_101067083	All Organisms → cellular organisms → Bacteria → Proteobacteria	693	Open in IMG/M
3300005458\|Ga0070681_10127622	All Organisms → cellular organisms → Bacteria	2476	Open in IMG/M
3300005458\|Ga0070681_10849347	All Organisms → cellular organisms → Bacteria → Proteobacteria	831	Open in IMG/M
3300005458\|Ga0070681_11336918	All Organisms → cellular organisms → Bacteria → Proteobacteria	640	Open in IMG/M
3300005530\|Ga0070679_100395128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1329	Open in IMG/M
3300005530\|Ga0070679_100484079	All Organisms → cellular organisms → Bacteria → Proteobacteria	1182	Open in IMG/M
3300005530\|Ga0070679_101043993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	762	Open in IMG/M
3300005540\|Ga0066697_10552938	Not Available	645	Open in IMG/M
3300005543\|Ga0070672_100076911	All Organisms → cellular organisms → Bacteria	2667	Open in IMG/M
3300005563\|Ga0068855_101505498	All Organisms → cellular organisms → Bacteria → Proteobacteria	691	Open in IMG/M
3300005563\|Ga0068855_102508958	Not Available	513	Open in IMG/M
3300005577\|Ga0068857_101636881	All Organisms → cellular organisms → Bacteria → Proteobacteria	629	Open in IMG/M
3300005614\|Ga0068856_100279653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1685	Open in IMG/M
3300005614\|Ga0068856_101920577	Not Available	603	Open in IMG/M
3300005616\|Ga0068852_100405472	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300005616\|Ga0068852_102386016	All Organisms → cellular organisms → Bacteria → Proteobacteria	550	Open in IMG/M
3300005764\|Ga0066903_100552514	All Organisms → cellular organisms → Bacteria	1975	Open in IMG/M
3300005764\|Ga0066903_101447995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. TSO35-2	1293	Open in IMG/M
3300005764\|Ga0066903_103892714	All Organisms → cellular organisms → Bacteria → Proteobacteria	801	Open in IMG/M
3300005764\|Ga0066903_107050609	Not Available	582	Open in IMG/M
3300005764\|Ga0066903_107625615	Not Available	557	Open in IMG/M
3300005841\|Ga0068863_102348474	All Organisms → cellular organisms → Bacteria → Proteobacteria	543	Open in IMG/M
3300006031\|Ga0066651_10778716	Not Available	518	Open in IMG/M
3300006032\|Ga0066696_10227200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1200	Open in IMG/M
3300006175\|Ga0070712_100347598	All Organisms → cellular organisms → Bacteria	1213	Open in IMG/M
3300006755\|Ga0079222_12134897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	555	Open in IMG/M
3300006755\|Ga0079222_12634329	Not Available	506	Open in IMG/M
3300006806\|Ga0079220_10183593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1190	Open in IMG/M
3300006806\|Ga0079220_10435382	All Organisms → cellular organisms → Bacteria → Proteobacteria	871	Open in IMG/M
3300006854\|Ga0075425_101211538	All Organisms → cellular organisms → Bacteria → Proteobacteria	858	Open in IMG/M
3300006881\|Ga0068865_100129244	Not Available	1890	Open in IMG/M
3300006954\|Ga0079219_10917411	Not Available	711	Open in IMG/M
3300009093\|Ga0105240_12431859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	542	Open in IMG/M
3300009174\|Ga0105241_11447779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	659	Open in IMG/M
3300010048\|Ga0126373_12805517	Not Available	544	Open in IMG/M
3300010303\|Ga0134082_10275885	All Organisms → cellular organisms → Bacteria → Proteobacteria	701	Open in IMG/M
3300010325\|Ga0134064_10190407	Not Available	731	Open in IMG/M
3300010333\|Ga0134080_10242323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	793	Open in IMG/M
3300010358\|Ga0126370_11146931	Not Available	719	Open in IMG/M
3300010359\|Ga0126376_12305789	Not Available	584	Open in IMG/M
3300010361\|Ga0126378_10011580	All Organisms → cellular organisms → Bacteria → Proteobacteria	7248	Open in IMG/M
3300010366\|Ga0126379_13085340	Not Available	558	Open in IMG/M
3300010371\|Ga0134125_11703841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	686	Open in IMG/M
3300010371\|Ga0134125_12023270	All Organisms → cellular organisms → Bacteria → Proteobacteria	626	Open in IMG/M
3300010371\|Ga0134125_12506222	All Organisms → cellular organisms → Bacteria → Proteobacteria	561	Open in IMG/M
3300010373\|Ga0134128_10205865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2214	Open in IMG/M
3300010373\|Ga0134128_10363379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1617	Open in IMG/M
3300010376\|Ga0126381_100005921	All Organisms → cellular organisms → Bacteria	13498	Open in IMG/M
3300010396\|Ga0134126_10353097	All Organisms → cellular organisms → Bacteria → Proteobacteria	1715	Open in IMG/M
3300010396\|Ga0134126_10765933	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300010396\|Ga0134126_11094608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	889	Open in IMG/M
3300010398\|Ga0126383_11267452	All Organisms → cellular organisms → Bacteria → Proteobacteria	827	Open in IMG/M
3300010398\|Ga0126383_13076126	Not Available	545	Open in IMG/M
3300010403\|Ga0134123_11500853	All Organisms → cellular organisms → Bacteria → Proteobacteria	718	Open in IMG/M
3300012203\|Ga0137399_10118489	All Organisms → cellular organisms → Bacteria → Proteobacteria	2076	Open in IMG/M
3300012203\|Ga0137399_11362468	Not Available	595	Open in IMG/M
3300012209\|Ga0137379_11022096	Not Available	732	Open in IMG/M
3300012209\|Ga0137379_11737708	All Organisms → cellular organisms → Bacteria → Proteobacteria	520	Open in IMG/M
3300012513\|Ga0157326_1076116	Not Available	541	Open in IMG/M
3300012918\|Ga0137396_10218121	All Organisms → cellular organisms → Bacteria → Proteobacteria	1404	Open in IMG/M
3300012927\|Ga0137416_11175610	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300012930\|Ga0137407_10869041	Not Available	852	Open in IMG/M
3300012955\|Ga0164298_10569587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	771	Open in IMG/M
3300012955\|Ga0164298_11279841	All Organisms → cellular organisms → Bacteria → Proteobacteria	560	Open in IMG/M
3300012971\|Ga0126369_10147550	All Organisms → cellular organisms → Bacteria → Proteobacteria	2207	Open in IMG/M
3300012971\|Ga0126369_10380792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. TSO35-2	1443	Open in IMG/M
3300012971\|Ga0126369_11846195	Not Available	693	Open in IMG/M
3300013104\|Ga0157370_10109956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2576	Open in IMG/M
3300013105\|Ga0157369_12167494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	563	Open in IMG/M
3300013296\|Ga0157374_11630200	Not Available	669	Open in IMG/M
3300013296\|Ga0157374_11951134	All Organisms → cellular organisms → Bacteria → Proteobacteria	613	Open in IMG/M
3300013306\|Ga0163162_10101363	Not Available	2971	Open in IMG/M
3300013306\|Ga0163162_11701212	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300013307\|Ga0157372_10153679	All Organisms → cellular organisms → Bacteria	2657	Open in IMG/M
3300013307\|Ga0157372_10187171	All Organisms → cellular organisms → Bacteria → Proteobacteria	2397	Open in IMG/M
3300013307\|Ga0157372_11101454	Not Available	919	Open in IMG/M
3300013307\|Ga0157372_11619276	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300013307\|Ga0157372_12365577	Not Available	610	Open in IMG/M
3300013307\|Ga0157372_13356218	Not Available	510	Open in IMG/M
3300014497\|Ga0182008_10623491	Not Available	608	Open in IMG/M
3300014968\|Ga0157379_11159579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	742	Open in IMG/M
3300014969\|Ga0157376_10426128	All Organisms → cellular organisms → Bacteria	1289	Open in IMG/M
3300015373\|Ga0132257_101392563	All Organisms → cellular organisms → Bacteria → Proteobacteria	892	Open in IMG/M
3300015374\|Ga0132255_103845514	All Organisms → cellular organisms → Bacteria → Proteobacteria	638	Open in IMG/M
3300016357\|Ga0182032_11614777	Not Available	564	Open in IMG/M
3300016422\|Ga0182039_11598869	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300018028\|Ga0184608_10069661	Not Available	1423	Open in IMG/M
3300018066\|Ga0184617_1250211	Not Available	531	Open in IMG/M
3300018071\|Ga0184618_10000992	All Organisms → cellular organisms → Bacteria → Proteobacteria	6863	Open in IMG/M
3300018431\|Ga0066655_10511049	Not Available	797	Open in IMG/M
3300018433\|Ga0066667_10256442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1329	Open in IMG/M
3300019881\|Ga0193707_1021679	Not Available	2125	Open in IMG/M
3300020580\|Ga0210403_10700937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	811	Open in IMG/M
3300020581\|Ga0210399_10762785	All Organisms → cellular organisms → Bacteria → Proteobacteria	792	Open in IMG/M
3300021170\|Ga0210400_10509835	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300021171\|Ga0210405_10825182	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300021181\|Ga0210388_11208067	Not Available	641	Open in IMG/M
3300021432\|Ga0210384_10389774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	1255	Open in IMG/M
3300025898\|Ga0207692_10805601	Not Available	614	Open in IMG/M
3300025903\|Ga0207680_10026208	All Organisms → cellular organisms → Bacteria	3228	Open in IMG/M
3300025906\|Ga0207699_10714130	All Organisms → cellular organisms → Bacteria → Proteobacteria	734	Open in IMG/M
3300025906\|Ga0207699_10754861	Not Available	714	Open in IMG/M
3300025912\|Ga0207707_10391646	Not Available	1193	Open in IMG/M
3300025916\|Ga0207663_10949539	All Organisms → cellular organisms → Bacteria → Proteobacteria	689	Open in IMG/M
3300025918\|Ga0207662_10743591	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300025920\|Ga0207649_11170367	Not Available	607	Open in IMG/M
3300025921\|Ga0207652_11218644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	654	Open in IMG/M
3300025921\|Ga0207652_11698872	All Organisms → cellular organisms → Bacteria → Proteobacteria	536	Open in IMG/M
3300025928\|Ga0207700_10868442	All Organisms → cellular organisms → Bacteria → Proteobacteria	807	Open in IMG/M
3300025929\|Ga0207664_10858827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	816	Open in IMG/M
3300025932\|Ga0207690_11019771	All Organisms → cellular organisms → Bacteria → Proteobacteria	689	Open in IMG/M
3300025933\|Ga0207706_10676324	All Organisms → cellular organisms → Bacteria → Proteobacteria	883	Open in IMG/M
3300025933\|Ga0207706_11321561	Not Available	595	Open in IMG/M
3300025940\|Ga0207691_10007370	All Organisms → cellular organisms → Bacteria → Proteobacteria	10600	Open in IMG/M
3300025944\|Ga0207661_11413998	Not Available	638	Open in IMG/M
3300025945\|Ga0207679_10701620	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300025949\|Ga0207667_10067835	All Organisms → cellular organisms → Bacteria	3715	Open in IMG/M
3300025972\|Ga0207668_10956328	All Organisms → cellular organisms → Bacteria → Proteobacteria	764	Open in IMG/M
3300025981\|Ga0207640_11325939	All Organisms → cellular organisms → Bacteria → Proteobacteria	643	Open in IMG/M
3300025986\|Ga0207658_11313210	All Organisms → cellular organisms → Bacteria → Proteobacteria	661	Open in IMG/M
3300025986\|Ga0207658_11607190	Not Available	594	Open in IMG/M
3300026023\|Ga0207677_10337192	All Organisms → cellular organisms → Bacteria	1258	Open in IMG/M
3300026023\|Ga0207677_10785525	Not Available	851	Open in IMG/M
3300026035\|Ga0207703_12199009	Not Available	528	Open in IMG/M
3300026067\|Ga0207678_11039167	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300026313\|Ga0209761_1008018	All Organisms → cellular organisms → Bacteria → Proteobacteria	6907	Open in IMG/M
3300026333\|Ga0209158_1007672	All Organisms → cellular organisms → Bacteria	5559	Open in IMG/M
3300027775\|Ga0209177_10274839	All Organisms → cellular organisms → Bacteria → Proteobacteria	632	Open in IMG/M
3300031716\|Ga0310813_10715752	Not Available	895	Open in IMG/M
3300031720\|Ga0307469_11380751	Not Available	671	Open in IMG/M
3300031736\|Ga0318501_10861670	Not Available	503	Open in IMG/M
3300031754\|Ga0307475_11396443	All Organisms → cellular organisms → Bacteria → Proteobacteria	540	Open in IMG/M
3300031890\|Ga0306925_12225605	Not Available	509	Open in IMG/M
3300031939\|Ga0308174_11100442	All Organisms → cellular organisms → Bacteria → Proteobacteria	676	Open in IMG/M
3300033412\|Ga0310810_11050511	All Organisms → cellular organisms → Bacteria → Proteobacteria	687	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	63.29%
Host-Associated	Host-Associated	36.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.39%
Plants	Host-Associated → Plants	36.71%
Aquatic	Environmental → Aquatic	1.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.89%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.82%
Sediment	Environmental → Aquatic → Sediment	1.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.41%
Loam	Environmental → Terrestrial → Soil → Loam	18.99%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.27%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.15%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.13%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.23%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.59%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.27%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.96%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	6.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	5.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	5.06%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.16%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.16%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.53%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.27%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.27%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.27%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.27%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.63%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012513	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510	Host-Associated	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1123490092	3300000956	Soil	NGNGVGGGPGNSADIQLWTVSDGHGFQVLQFTKSFTAQHKDLFENTVTSEQSR*
JGI25382J43887_101299332	3300002908	Grasslands Soil	DGHGNGNGHGNGNSTEVQLWTVSDGHGFQVLRFSNRFKAQHKDLFENTVTSEQSR*
Ga0063356_1024177542	3300004463	Arabidopsis Thaliana Rhizosphere	GNSADIELWTVTDGHGFQVLRFSKSFIAQHKDLFKNVVTTDQSR*
Ga0063356_1045443181	3300004463	Arabidopsis Thaliana Rhizosphere	NSADIQLWTVSDGHGFQVLQFSKSFTAQHKDLFENTVTTEQSQ*
Ga0066395_100729572	3300004633	Tropical Forest Soil	VAKGKGDGVGGGPGNSADIQLWTVSDGHGFQVLQFTKSFTAQHKDLFENTVTTEQSR*
Ga0066679_110157731	3300005176	Soil	GNGNGVGGGPGNSADIQLWTVSDGHGFQVLQFTKSFTAQHKDLFENTVTSEQSR*
Ga0070690_1007961721	3300005330	Switchgrass Rhizosphere	GNGVGGGPGNSADIQLWTVSDGHGFQVLRFSKSFTAQHKDLFENTVTTEQSL*
Ga0068869_1011391032	3300005334	Miscanthus Rhizosphere	IQLWTVSDGHGFQVLRFSKSFTAQHKDLFENTVTTEQSL*
Ga0070680_1008688281	3300005336	Corn Rhizosphere	GGGPGNSADIQLWTVSDGHGFQVLRFSKSFTAQHKDLFENVVTTEQSL*
Ga0068868_1010915771	3300005338	Miscanthus Rhizosphere	GGGPGNSADIQLWTVSDAHGLQVLQFSKSFTAQHKDLFENTVTTEQDR*
Ga0068868_1014069611	3300005338	Miscanthus Rhizosphere	GNGVGGGPGNSADIQLWAVSDGHGFQVLQFSKSFTAQHKDLFENTVTTEQSQ*
Ga0070661_1003947821	3300005344	Corn Rhizosphere	VGGGPGNSADIQLWTVSDAHGFQVLQFSKSFTAQHKDLFESTVTTRSR*
Ga0070674_1008120481	3300005356	Miscanthus Rhizosphere	NDKAKHDNNGNGNGVGGGPGNSADIQLWTVSDGHGFQVLRFTKSFTAQHKDLFENTVTTEQSL*
Ga0070673_1002809032	3300005364	Switchgrass Rhizosphere	KGNGVGGGPGNSADIQLWAVSDGHGFQVLRFSKTFTAQHKDLFENTVTTEQSQ*
Ga0070659_1001065341	3300005366	Corn Rhizosphere	GGGPGNSADIQLWTVSDGHGFQVLQFSKSFTAQHKDLFENTVTTEQSQ*
Ga0070711_1007334171	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VGGGPGNSADIQLWTVSDGHGFQVLQFSKSFTAQHKDLFANVVTTEQSQ*
Ga0070711_1018882631	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	NGNGNGVGGGPGNSADIQLWTVSDGHGFQVLQFSKSFTAQHKDLFKNTVTTEQDR*
Ga0070708_1003334452	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VGGGPGNSADIQLWTVSDGHGFQVLQFTKSFTAQHKDLFANTVTSE*
Ga0070708_1015948711	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VGGGPGNSADIQLWTVSDGHGFQVLQFTKSFTAQHKDLFADTVTTEQSR*
Ga0066689_100679654	3300005447	Soil	NSADIQLWTVSDGHGFQVLQFTKSFTAQHKDLFENTVTSE*
Ga0066689_102297462	3300005447	Soil	NSADIQLWTVSDGHGFQVLQFTKSFTAQHKDLFENTVTSEQSR*
Ga0066682_101978641	3300005450	Soil	GNGVGGGPGNSADIQLWTVSDGHGFQVLQFTKSFTAQHKDLFENTVTSEQSR*
Ga0070678_1012274452	3300005456	Miscanthus Rhizosphere	NGVGGGPGNSADIQLWTVSDAHGFQVLQFPKSFTAKHKDLFENTVTTEHTR*
Ga0070662_1010670832	3300005457	Corn Rhizosphere	GGPGNSADIQLWTVSDGHGFQVLQFSKSFTAQHKDLFANVVTTEQSE*
Ga0070681_101276221	3300005458	Corn Rhizosphere	IQLWTVSDGHGFQVLQFSKSFTAQHKDLFANVVTTEQSE*
Ga0070681_108493471	3300005458	Corn Rhizosphere	GVGGGPGNSADIQLWTVSDGHGFQVLRFAKSFTAQHQDLFANVVTTEQSQ*
Ga0070681_113369181	3300005458	Corn Rhizosphere	NGNGNGVGGHPGNSADIQLWTVSDAHGFQVLQFSKSFTAQHKDLFQNTVTTQ*
Ga0070679_1003951282	3300005530	Corn Rhizosphere	GPGNSADIQLWTVSDGHGFQVLRFAKNFTAQHKDLFKDTVTTEQSR*
Ga0070679_1004840792	3300005530	Corn Rhizosphere	ADIQLWTVSDGHGFQVLQFSKNFTAQHKDLFANTVTTEQSE*
Ga0070679_1010439932	3300005530	Corn Rhizosphere	GGPGNSADIQLWTVSDGHGFQVLQFSKSFTAQHKDLFENTVTTEQSQ*
Ga0066697_105529382	3300005540	Soil	LWTVSDGHGFQVLQFTKSFTAQHKDLFENTVTSE*
Ga0070672_1000769111	3300005543	Miscanthus Rhizosphere	GVGGGPGNSADIQLWTVSDGHGFQVLRFSKSFTAQHKDLFENTVTTEQSL*
Ga0068855_1015054981	3300005563	Corn Rhizosphere	DIQLWTVSDGHGFQVLRFTKSFTAQHKDLFENTVTTEQSQ*
Ga0068855_1025089581	3300005563	Corn Rhizosphere	DIQLWTVSDGHGFQVLQFSKSFTAQHKDLFKNTVTTEQDR*
Ga0068857_1016368812	3300005577	Corn Rhizosphere	DIQLWTVSDGHGFQVLQFSKNFTAQHKDLFANTVTTEQSE*
Ga0068856_1002796532	3300005614	Corn Rhizosphere	IQLWTVSDGHGFQVLRFSKSFTAQHKDLFANVVTTEQDR*
Ga0068856_1019205772	3300005614	Corn Rhizosphere	NGDDNANGHGNRGNGVAGGPGNSADVQLWVVSDAHGFQALQFPKSFTAQHKDLFSNVVTTDQTR*
Ga0068852_1004054722	3300005616	Corn Rhizosphere	LWTVSDGHGFQVLRFAKSFTAQHQDLFANVVTTEQSQ*
Ga0068852_1023860162	3300005616	Corn Rhizosphere	NGNGNGNAVGGGPGNSADIQLWTVSDGHGFQVLRFSKSFTAQHKDLFENVVTTQQDR*
Ga0066903_1005525141	3300005764	Tropical Forest Soil	LWTVSDGHGFQVLQFTKSFTAQHKDLFENTVTTESSR*
Ga0066903_1014479951	3300005764	Tropical Forest Soil	GKGDGVGGGPGNSADIQLWTVSDGHGFQVLQFSKSFTAQHKDLFANTVTTEQSQ*
Ga0066903_1038927142	3300005764	Tropical Forest Soil	VSDGHGFQVLQFSKSFTAQHKDLFANTVTTQQSQ*
Ga0066903_1070506092	3300005764	Tropical Forest Soil	GVGGGPGNSADIQLWTVSDGHGFQVLQFSKSFTAQHKDLFANTVTTEQSQ*
Ga0066903_1076256152	3300005764	Tropical Forest Soil	GNGVGGGPGNSADIQLWTVSDGHGFQVLQFSKSFTAQHKDLFANTVTSQQSR*
Ga0068863_1023484741	3300005841	Switchgrass Rhizosphere	LWTVSDGHGFQVLRFPKSFTAQHKDLFANTVTTEQDR*
Ga0066651_107787161	3300006031	Soil	GNSADIQLWTVSDGHGFQVLKFSKSFTAQHKDLFENVVTTQQDR*
Ga0066696_102272001	3300006032	Soil	GGPGNSADIQLWTVSDGHGFQVLQFPKSFTAQHKDLFANTVTSE*
Ga0070712_1003475981	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GPGNSADIQLWTVSDGHGFQVLRFTKSFTAQHKDLFKDTVTTEQSR*
Ga0079222_121348972	3300006755	Agricultural Soil	ADIQLWTVSDGHGFQVLRFSKSFTAQHKDLFANVVTTEQSQ*
Ga0079222_126343291	3300006755	Agricultural Soil	GNGNAVGGGPGNSADIQLWVVSDGHGFQVLQFSKSFTAQHKDLFANVVTTEQSQ*
Ga0079220_101835932	3300006806	Agricultural Soil	GVGGGPGNSADIQLWTVSDGHGFQVLQFSKSFTARHKDLFSNVVTTEQDR*
Ga0079220_104353822	3300006806	Agricultural Soil	GGGPGNSADIQLWTVSDGHGFQVLRFSKRFTAQHKELFENTITSEQSR*
Ga0075425_1012115381	3300006854	Populus Rhizosphere	GNSADIQLWTVSDGHGFQVLRFSKRFTAQHKDLFENTVTSEQSR*
Ga0068865_1001292441	3300006881	Miscanthus Rhizosphere	NGVGGGPGNSADIQLWAVSDGHGFQVLRFSKTFTAQHKDLLENTVTTEQSQ*
Ga0079219_109174112	3300006954	Agricultural Soil	VGGGPGNSADIQLWTVSDGHGFQVLRFSKTFTAQHKDLFENTVTTEQTP*
Ga0105240_124318593	3300009093	Corn Rhizosphere	ADIQLWTVSDGHGFQVLQFSKSFTAQHKDLFKNTVTTEQDR*
Ga0105241_114477792	3300009174	Corn Rhizosphere	PGNSADIQLWTVSDGHGFQVLQFSKSFTAQHKDLFANVVTTEQSQ*
Ga0126373_128055171	3300010048	Tropical Forest Soil	NGVGGGPGNSADIQLWTVSDGHGFQVLQFTKSFTAQHKDLFENTVTTENSL*
Ga0134082_102758851	3300010303	Grasslands Soil	NSTEVQLWTVSDGHGFQVLRFSNRFKAQHKDLFENTVTSEQSR*
Ga0134064_101904071	3300010325	Grasslands Soil	NATDVQLWTVTDGHGFQVLHFSSNFLAQHQDLFANTVTSNTVTSE*
Ga0134080_102423231	3300010333	Grasslands Soil	IQLWTVSDGHGFQVLQFTKSFTAQHKDLFENTVTSEQSR*
Ga0126370_111469312	3300010358	Tropical Forest Soil	GPGNSADIQLWTVSDGHGFQVLRFPKSFTAQHKDLFENTVTTEGSL*
Ga0126376_123057891	3300010359	Tropical Forest Soil	GGPGNSADIQLWTVSDGHGFQVLQFSKSFTAQHKDLFANTVTTEQSQ*
Ga0126378_100115805	3300010361	Tropical Forest Soil	QLWTVSDGHGFQVLQFSKSFTAQHKDLFANTVTTEQDR*
Ga0126379_130853401	3300010366	Tropical Forest Soil	GNSADIQLWTVSDGHGFQVLQFAKSFTAQHKDLFENTVTTEQSR*
Ga0134125_117038412	3300010371	Terrestrial Soil	GNSADIQLWTVSDGHGFQVLQFSKSFTAQHKDLFKNTVTTEQDR*
Ga0134125_120232702	3300010371	Terrestrial Soil	GPGREVQLWTVSDGHGFQVLQFSRSFTAQHKDLFENTVTTEQSQ*
Ga0134125_125062221	3300010371	Terrestrial Soil	WTVSDGHGFQVLQFPKNFTAQHKDLFANVVTTEQSQ*
Ga0134128_102058651	3300010373	Terrestrial Soil	GNGVGGGPGNSADIQLWTVSDGHGFQVLQFSKSFTAQHKDLFENTVTTEQSQ*
Ga0134128_103633791	3300010373	Terrestrial Soil	HSVGGRPGNSADIQLWTVSDGHGFQVLQFSKSFTAQHKDLFANVVTTEQSQ*
Ga0126381_10000592117	3300010376	Tropical Forest Soil	GVGGGPGNSADIQLWVVSDSHGFQVLQFSKSFTAQHKDLFANTVTTEGTR*
Ga0134126_103530973	3300010396	Terrestrial Soil	GPEVQLWTVSDGHGFQVLRFSNGFEAEHRDLFAHTVTTEGPN*
Ga0134126_107659332	3300010396	Terrestrial Soil	GPGNSADIQLWTVSDAHGFQVLQFSKSFTAQHKDLFESTVTTRSR*
Ga0134126_110946082	3300010396	Terrestrial Soil	GNGVGGGPGNSADIQLWTVSDGHGFQVLQFTKSFTAQHKDLFKNTVTTEQDR*
Ga0126383_112674521	3300010398	Tropical Forest Soil	DIQLWTVSDGHGFQVLRFPKSFTAQHKDLFENTVTTEGSL*
Ga0126383_130761262	3300010398	Tropical Forest Soil	GDGVGGGPGNSADIQLWTVSDGHGFQVLQFTKSFTAQHKDLFANTVTTEQGR*
Ga0134123_115008531	3300010403	Terrestrial Soil	LWTVSDGHGFQVLRFSNRFKAQHKDLFENTVTSEQSR*
Ga0137399_101184891	3300012203	Vadose Zone Soil	EVQLWTVSDGHGFQVLRFSNRFKAQHKDLFENTVTSEQSR*
Ga0137399_113624681	3300012203	Vadose Zone Soil	GNGVGGGPGNSADIQLWTVSDGHGFQVLQFPKSFTAQHKDLFADTVTTEQSR*
Ga0137379_110220961	3300012209	Vadose Zone Soil	SADIQLWTVSDGHGFQVLQFTKSFTAQHKDLFADTVTTEQTR*
Ga0137379_117377081	3300012209	Vadose Zone Soil	RGNNGVGGGPGNSADIQLWTVSDGHGFQVLRFSKSFTAQHKDLFANVVTTEQSR*
Ga0157326_10761162	3300012513	Arabidopsis Rhizosphere	GNGVGGGPGNSADIQLWAVSDGHGFQVLQFSKSFTAQHKDLFENTVTTEQSL*
Ga0137396_102181211	3300012918	Vadose Zone Soil	TVSDGHGFQVLRFSNRFKAQHKDLFENAVTSEQSR*
Ga0137416_111756102	3300012927	Vadose Zone Soil	NDHGNGHGNGHDHGEGNSTEVQLWTVSDGHGFQVLQFTKSFTAQHKDLFENTVTSEQSR*
Ga0137407_108690411	3300012930	Vadose Zone Soil	NGNGVGGGPGNSADIQLWTVSDGHGFQVLQFPKSFTAQHKDLFANTVTSE*
Ga0164298_105695871	3300012955	Soil	NGVGGGPGNSADIQLWTVSDGHGFQVLRFSKSFTAQHTDLFENTVTTEQSL*
Ga0164298_112798411	3300012955	Soil	PAGQHGFQVLQFSKSFTAQHKDLFANVVTTEQSE*
Ga0126369_101475501	3300012971	Tropical Forest Soil	QLWTVSDGHGFQVLQFTKSFTAQHKDLFENTVTTESSR*
Ga0126369_103807921	3300012971	Tropical Forest Soil	ADIQLWTVSDGHGFQVLQFSKSFTAQHKDLFANTVTTEQSQ*
Ga0126369_118461951	3300012971	Tropical Forest Soil	NGNGNGVGGGPGNSADIQIWTVSDGHGFQVLQFTKSFTAQHKDLFENTVTTEGSI*
Ga0157370_101099561	3300013104	Corn Rhizosphere	NGVGGGPGNSADIQLWTVSDGHGFQVLQFSKSFTAQHKDLFANVVTTEQSQ*
Ga0157369_121674941	3300013105	Corn Rhizosphere	NGVGGGPGNSADIQLWTVSDGHGFQVLQFSKSFTAQHKDLFANVVTTQQDR*
Ga0157374_116302001	3300013296	Miscanthus Rhizosphere	NPTDVQLWVVSDGHGFQALHFSSTFLAQHQALFANTVTTESSR*
Ga0157374_119511342	3300013296	Miscanthus Rhizosphere	GNGNGVGGGPGNSADIQLWTVSDGHGFQVLRFSKSFTAQHKDLFENTVTTEQSL*
Ga0163162_101013631	3300013306	Switchgrass Rhizosphere	KGNGHDKAKRNGNGVGGGPGNSADIQLWTVSDGHGFQVLQFSKSFTAQHKDLFENTVTTEQSQ*
Ga0163162_117012123	3300013306	Switchgrass Rhizosphere	VSDSHGFQVVQFSKSFTAQHKDLFENTVTTEQSQ*
Ga0157372_101536791	3300013307	Corn Rhizosphere	GNGNGVGGGPGNSADIQLWTVSDAHGFQVLQFPKSFTAQHKDLFENVVTTEQTR*
Ga0157372_101871713	3300013307	Corn Rhizosphere	GNGNGVGGGNGNSVDIQIWTVSDGHGFQVLHFPKRFTAQHKDLFENTVTTEGSI*
Ga0157372_111014541	3300013307	Corn Rhizosphere	NGNGVGGGPGNSADIQLWAVSDGHGFQVLRFSKTFTAQHKDLFENTVTTEQSQ*
Ga0157372_116192761	3300013307	Corn Rhizosphere	GGPGNSADVQLWVVSDAHGFQALQFPKSFTAQHKDLFSNVVTTDQTR*
Ga0157372_123655771	3300013307	Corn Rhizosphere	TVSDGHGFQVLRFSKSFTAQHKDLFENTVTTEQSL*
Ga0157372_133562181	3300013307	Corn Rhizosphere	NGVGGGPGNSADIQLWTVSDGHGFQVLQFTKSFTAQHKDLFENTVTTEGSL*
Ga0182008_106234911	3300014497	Rhizosphere	GGGPGNSADIQLWTVSDGHGFQVLQFSKSFTAQHKDLFENVVTTQQDR*
Ga0157379_111595791	3300014968	Switchgrass Rhizosphere	AKGNNGVGGGPGNSADIQLWTVSDGHGLQVLHFAKSFTAQHKDLFENVVTTQQDR*
Ga0157376_104261282	3300014969	Miscanthus Rhizosphere	QLWTVSDAHGFQVLQFPKSFTAKHKDLFENTVTTEHTR*
Ga0132257_1013925632	3300015373	Arabidopsis Rhizosphere	GVGGGPGNSADIQLWTVSDGHGFQVLRFSKTFTAQHKDLFENTVTTEQTP*
Ga0132255_1038455141	3300015374	Arabidopsis Rhizosphere	KRNGNGVGGGPGNSADIQLWTVSDSHGFQVVQFSKSFTAQHKDLFENTVTTEQSQ*
Ga0182032_116147771	3300016357	Soil	GVGGGPGNSADIQLWTVSDGHGFQVLQFSKSFTAQHKDLFANTVTTKQSQ
Ga0182039_115988691	3300016422	Soil	NGVGGGPGNSADIQLWTVSDGHGFQVLQFTKSFTAQHKDLFENTVTTENSL
Ga0184608_100696611	3300018028	Groundwater Sediment	NGNGNGVGGGPGNSADIQLWTVSDGHGFQVLQFTKSFTAQHKDLFENTVTSE
Ga0184617_12502111	3300018066	Groundwater Sediment	GGGPGNSADIQLWTVSDGHGFQVLQFPKSFTAQHKDLFANTVTSE
Ga0184618_100009921	3300018071	Groundwater Sediment	GNGHGNGNSTEVQLWTVSDGHGFQVLRFSNRFKAQHKDLFENTVTSEQSR
Ga0066655_105110491	3300018431	Grasslands Soil	LWTVSDGHGFQVLQFTKSFTAQHKDLFENTVTSEQSR
Ga0066667_102564421	3300018433	Grasslands Soil	GNSADIQLWTVSDGHGFQVLQFTKSFTAQHKDLFENTVTSEQSR
Ga0193707_10216794	3300019881	Soil	PGNSADIQLWTVTDGHGFQVLQFPKSFTAQHKDLFANTVTTEQSR
Ga0210403_107009372	3300020580	Soil	HGNGKGDDHGNGKGDDHGNSTEVQLWIVSDGHGFQVLRFSNRFVAQHKDLFEHTNSSYQ
Ga0210399_107627852	3300020581	Soil	TEVQLWTVSDGHGFQVLRFSKAFKAQHEELFENTVTTEQSR
Ga0210400_105098351	3300021170	Soil	NDDGKDNGNGVGGGHGNSADIQLWTVSDGHGFQVLRFTKSFTARHKDLFADTVTTEQSR
Ga0210405_108251822	3300021171	Soil	GNSADIQLWTVSDGHGFQVLQFTKSFTARHKDLFADTVTTEQSR
Ga0210388_112080672	3300021181	Soil	GNGNGNGHGDDHGNSSEVQLWIVSDGHGLQVLRFSNRFVAQHKELFEHTNSSYQ
Ga0210384_103897743	3300021432	Soil	GGEGNGNAADIQLWTVSDGHGFQVLQFTKRFTAQHKDLFENTVTTEQSQ
Ga0207692_108056011	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	NGNGVGGGPGNSADIQLWTVSDGHGFQVLQFTKSFTAQHKDLFANTVTTE
Ga0207680_100262081	3300025903	Switchgrass Rhizosphere	VGGEPGNSADIQLWTVSDSHGFQVVQFSKSFTAQHKDLFENTVTTEQSQ
Ga0207699_107141301	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	GKGNGVGGGPGNSADIQLWTVSDGHGFQVLQFPKNFTAQHKDLFANVVTTEQSQ
Ga0207699_107548611	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	GNGNGVGGGNGNSVDIQIWTVSDGHGFQVLHFPKRFTAQHKDLFENTVTTEGSI
Ga0207707_103916464	3300025912	Corn Rhizosphere	NGNAVGGGPGNSADIQLWTVSDGHGFQVLRFSKSFTAQHKDLFENVVTTQQDR
Ga0207663_109495392	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	LWTVSDGHGFQVLQFSKSFTAQHKDLFANVVTTEQSQ
Ga0207662_107435911	3300025918	Switchgrass Rhizosphere	VGGGPGNSADIQLWTVSDGHGFQVLRFSKSFTAQHKDLFENTVTTEQSL
Ga0207649_111703671	3300025920	Corn Rhizosphere	ADIQLWTVSDGHGFQVLQFSKSFTAQHKDLFENVVTTQQDR
Ga0207652_112186441	3300025921	Corn Rhizosphere	NSADIQLWTVSDGHGFQVLQFSKSFTAQHKDLFKNTVTTEQDR
Ga0207652_116988722	3300025921	Corn Rhizosphere	PGNSADIQLWTVSDGHGFQVLRFAKNFTAQHKDLFKDTVTTEQSR
Ga0207700_108684422	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	NSADIQLWTVSDAHGFQVLQFPKSFTAQHKDLFENVVTTEQTR
Ga0207664_108588271	3300025929	Agricultural Soil	IQIWTVSDGHGFQVLQFTKSFTAQHKDLFENTVTTEGSI
Ga0207690_110197712	3300025932	Corn Rhizosphere	VGGGPGNSADIQLWTVSDGHGFQVLQFSKNFTAQHKDLFANTVTTEQSE
Ga0207706_106763241	3300025933	Corn Rhizosphere	GNGVGGGPGNSADIQLWTVSDGHGFQVLQFSKSFTAQHKDLFANVVTTEQSE
Ga0207706_113215611	3300025933	Corn Rhizosphere	SADIQLWTVSDSHGFQVVQFSKSFTAQHKDLFENTVTTEQSQ
Ga0207691_1000737015	3300025940	Miscanthus Rhizosphere	GVGGGPGNSADIQLWTVSDGHGFQVLRFSKSFTAQHKDLFENTVTTEQSL
Ga0207661_114139982	3300025944	Corn Rhizosphere	SVDIQIWTVSDGHGFQVLHFPKRFTAQHKDLFENTVSTEGSI
Ga0207679_107016202	3300025945	Corn Rhizosphere	WTVSDGHGFQVLRFSKSFTAQHKDLFENVVTTQQDR
Ga0207667_100678351	3300025949	Corn Rhizosphere	KANGDAKGNHSVGGGPGNSADIQLWTVSDGHGFQVLQFSKSFTAQHKDLFANVVTTEQSQ
Ga0207668_109563281	3300025972	Switchgrass Rhizosphere	GNGNGVGGGPGNSADIQLWTVSDSHGFQVVQFSKSFTAQHKDLFENTVTTEQSQ
Ga0207640_113259391	3300025981	Corn Rhizosphere	WTVSDGHGFQVLRFSKSFTAQHKDLFENTVTTEQSQ
Ga0207658_113132101	3300025986	Switchgrass Rhizosphere	VGNGVGGGPGNSADIQLWTVSDGHGFQVLRFSKSFTAQHKDLFENTVTTEQSL
Ga0207658_116071901	3300025986	Switchgrass Rhizosphere	LWAVSDGHGFQVLQFSKSFTAQHKDLFENTVTTEQSQ
Ga0207677_103371921	3300026023	Miscanthus Rhizosphere	LWTVSDSHGFQVVQFSKSFTAQHKDLFENTVTTEQSQ
Ga0207677_107855251	3300026023	Miscanthus Rhizosphere	RNGNGVGGGPGNSADIQLWAVSDGHGFQVLQFSKSFTAQHKDLFENTVTTEQSQ
Ga0207703_121990091	3300026035	Switchgrass Rhizosphere	GPGNSADIQLWAVSDGHGFQVLQFPKSFTAQHKDLFANVVTTEQSE
Ga0207678_110391672	3300026067	Corn Rhizosphere	QLWVVSDGHGFQVLQFSKSFTAQHKDLFANVVTTEQSQ
Ga0209761_10080188	3300026313	Grasslands Soil	VQLWTVSDGHGFQVLRFSNRFKAQHKDLFENTVTSEQSR
Ga0209158_10076721	3300026333	Soil	PGNSADIQLWTVSDGHGFQVLQFTKSFTAQHKDLFENTVTSEQSR
Ga0209177_102748391	3300027775	Agricultural Soil	NSADIQLWVVSDGHGFQVLRFSKSFTAQHKDLFENTVTTEQTP
Ga0310813_107157522	3300031716	Soil	GQGKAKHNGNDGVGGGPGNSADIQLWTVTDGHGFQALRFSKRFTAQHQDLFSNVVTTDQS
Ga0307469_113807511	3300031720	Hardwood Forest Soil	NSADIQLWTVSDGHGFQVLQFTKRFTAQHKDLFENTVTSE
Ga0318501_108616702	3300031736	Soil	IQLWTVSDGHGFQVLQFTKRFTAQHKDLFENTVTTEQSR
Ga0307475_113964431	3300031754	Hardwood Forest Soil	NSADIQLWTVSDGHGFQVLQFSKSFTAQHKDLFENTVTTEQSQ
Ga0306925_122256052	3300031890	Soil	LWTVSDGHGFQVLQFTKSFTAQHKDLFENTVTTENSL
Ga0308174_111004421	3300031939	Soil	DIQLWTVSDGHGFQVLQFSKSFTAQHKDLFENTVTTEQSE
Ga0310810_110505111	3300033412	Soil	GNSADIQLWTVSDGHGFQVLQFSKSFTAQHKDLFANVVTTEQSE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F042471

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences