Metagenome / Metatranscriptome Family F042503

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F042503
Family Type	Metagenome / Metatranscriptome
Number of Sequences	158
Average Sequence Length	61 residues
Representative Sequence	MTQKELLPKALVTAMMFLTLLGTVGCMTWHQAVTSAAGDVASTIDPAIDPGQSAQAKCEDFTCEP
Number of Associated Samples	126
Number of Associated Scaffolds	158

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.75 %
% of genes near scaffold ends (potentially truncated)	27.22 %
% of genes from short scaffolds (< 2000 bps)	89.87 %
Associated GOLD sequencing projects	115
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (67.089 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (28.481 % of family members)
Environment Ontology (ENVO)	Unclassified (40.506 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.101 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 56.99% β-sheet: 0.00% Coil/Unstructured: 43.01%
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Predicted 3D Structure

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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 158 Family Scaffolds
PF04264	YceI	46.84
PF01169	UPF0016	9.49
PF00149	Metallophos	6.33
PF01734	Patatin	1.27
PF00902	TatC	0.63

COG ID	Name	Functional Category	% Frequency in 158 Family Scaffolds
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	46.84
COG2119	Putative Ca2+/H+ antiporter, TMEM165/GDT1 family	General function prediction only [R]	9.49
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	1.27
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	1.27
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	1.27
COG0805	Twin-arginine protein secretion pathway component TatC	Intracellular trafficking, secretion, and vesicular transport [U]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.09 %
Unclassified	root	N/A	32.91 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.09 %
Unclassified	root	N/A	32.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.09 %
Unclassified	root	N/A	32.91 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	53.16 %
Unclassified	root	N/A	32.91 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.27 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	46.20 %
Unclassified	root	N/A	32.91 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	1.27 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	46.20 %
Unclassified	root	N/A	32.91 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	1.27 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	43.04 %
Unclassified	root	N/A	32.91 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	1.27 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.63 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	43.04 %
Unclassified	root	N/A	32.91 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	1.27 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.63 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	43.04 %
Unclassified	root	N/A	32.91 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	1.27 %
Myxococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	0.63 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	43.04 %
Unclassified	root	N/A	32.91 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	1.27 %
Myxococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus	0.63 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	43.04 %
Unclassified	root	N/A	32.91 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	1.27 %
Myxococcus xanthus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus xanthus	0.63 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	43.04 %
Unclassified	root	N/A	32.91 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	1.27 %
Myxococcus xanthus DK 1622	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus xanthus → Myxococcus xanthus DK 1622	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10111304	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	794	Open in IMG/M
3300002908\|JGI25382J43887_10094767	All Organisms → cellular organisms → Bacteria	1585	Open in IMG/M
3300005166\|Ga0066674_10093974	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1388	Open in IMG/M
3300005174\|Ga0066680_10345052	Not Available	949	Open in IMG/M
3300005175\|Ga0066673_10556031	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	672	Open in IMG/M
3300005176\|Ga0066679_10480254	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	812	Open in IMG/M
3300005177\|Ga0066690_10342646	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1013	Open in IMG/M
3300005178\|Ga0066688_10066179	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus xanthus → Myxococcus xanthus DK 1622	2132	Open in IMG/M
3300005178\|Ga0066688_10127603	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1578	Open in IMG/M
3300005178\|Ga0066688_10594877	Not Available	711	Open in IMG/M
3300005180\|Ga0066685_10145472	All Organisms → cellular organisms → Bacteria → Proteobacteria	1609	Open in IMG/M
3300005181\|Ga0066678_10274507	Not Available	1097	Open in IMG/M
3300005181\|Ga0066678_10487468	Not Available	820	Open in IMG/M
3300005187\|Ga0066675_10213955	All Organisms → cellular organisms → Bacteria	1361	Open in IMG/M
3300005280\|Ga0065696_1260632	Not Available	503	Open in IMG/M
3300005440\|Ga0070705_101553952	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	556	Open in IMG/M
3300005445\|Ga0070708_100684659	Not Available	965	Open in IMG/M
3300005445\|Ga0070708_100731590	Not Available	931	Open in IMG/M
3300005445\|Ga0070708_102221524	Not Available	507	Open in IMG/M
3300005446\|Ga0066686_10366500	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	983	Open in IMG/M
3300005447\|Ga0066689_10556908	Not Available	724	Open in IMG/M
3300005447\|Ga0066689_10809845	Not Available	582	Open in IMG/M
3300005467\|Ga0070706_101057931	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	747	Open in IMG/M
3300005467\|Ga0070706_101836379	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	550	Open in IMG/M
3300005518\|Ga0070699_102126271	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	512	Open in IMG/M
3300005536\|Ga0070697_100372746	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1235	Open in IMG/M
3300005536\|Ga0070697_102046604	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	512	Open in IMG/M
3300005540\|Ga0066697_10359673	Not Available	847	Open in IMG/M
3300005546\|Ga0070696_100260960	Not Available	1314	Open in IMG/M
3300005546\|Ga0070696_101107498	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	666	Open in IMG/M
3300005552\|Ga0066701_10046985	All Organisms → cellular organisms → Bacteria	2350	Open in IMG/M
3300005553\|Ga0066695_10224419	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300005554\|Ga0066661_10480912	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	754	Open in IMG/M
3300005557\|Ga0066704_10041637	All Organisms → cellular organisms → Bacteria	2863	Open in IMG/M
3300005557\|Ga0066704_10496257	Not Available	804	Open in IMG/M
3300005558\|Ga0066698_10534211	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	797	Open in IMG/M
3300005566\|Ga0066693_10476786	Not Available	513	Open in IMG/M
3300005574\|Ga0066694_10139979	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1144	Open in IMG/M
3300005586\|Ga0066691_10296522	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	953	Open in IMG/M
3300005587\|Ga0066654_10838874	Not Available	524	Open in IMG/M
3300005598\|Ga0066706_11005327	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	642	Open in IMG/M
3300006031\|Ga0066651_10175127	Not Available	1131	Open in IMG/M
3300006034\|Ga0066656_10450579	Not Available	837	Open in IMG/M
3300006046\|Ga0066652_101389957	Not Available	657	Open in IMG/M
3300006046\|Ga0066652_101805255	Not Available	552	Open in IMG/M
3300006173\|Ga0070716_101164384	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	618	Open in IMG/M
3300006755\|Ga0079222_10350529	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300006791\|Ga0066653_10224950	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	955	Open in IMG/M
3300006796\|Ga0066665_10093314	All Organisms → cellular organisms → Bacteria	2191	Open in IMG/M
3300006797\|Ga0066659_10006876	All Organisms → cellular organisms → Bacteria → Proteobacteria	5830	Open in IMG/M
3300006852\|Ga0075433_11279351	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	636	Open in IMG/M
3300006854\|Ga0075425_100298927	All Organisms → cellular organisms → Bacteria → Proteobacteria	1852	Open in IMG/M
3300006903\|Ga0075426_10392306	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1024	Open in IMG/M
3300006904\|Ga0075424_100663590	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300006904\|Ga0075424_100809448	Not Available	1000	Open in IMG/M
3300006904\|Ga0075424_102320050	Not Available	564	Open in IMG/M
3300006954\|Ga0079219_10947984	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	704	Open in IMG/M
3300006954\|Ga0079219_11546807	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	604	Open in IMG/M
3300007076\|Ga0075435_101329251	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	630	Open in IMG/M
3300007255\|Ga0099791_10003931	All Organisms → cellular organisms → Bacteria	6068	Open in IMG/M
3300007258\|Ga0099793_10076735	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1519	Open in IMG/M
3300009012\|Ga0066710_100697886	All Organisms → cellular organisms → Bacteria	1547	Open in IMG/M
3300009012\|Ga0066710_101976904	Not Available	867	Open in IMG/M
3300009012\|Ga0066710_102271053	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	790	Open in IMG/M
3300009038\|Ga0099829_10234457	All Organisms → cellular organisms → Bacteria → Proteobacteria	1493	Open in IMG/M
3300009090\|Ga0099827_10644018	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300009137\|Ga0066709_101176229	Not Available	1129	Open in IMG/M
3300009137\|Ga0066709_102375460	Not Available	722	Open in IMG/M
3300009143\|Ga0099792_10178046	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1194	Open in IMG/M
3300010301\|Ga0134070_10157407	Not Available	817	Open in IMG/M
3300010303\|Ga0134082_10279949	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	696	Open in IMG/M
3300010320\|Ga0134109_10201781	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	734	Open in IMG/M
3300010322\|Ga0134084_10291825	Not Available	603	Open in IMG/M
3300010336\|Ga0134071_10210655	Not Available	960	Open in IMG/M
3300010400\|Ga0134122_11483030	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	696	Open in IMG/M
3300011269\|Ga0137392_10341989	Not Available	1239	Open in IMG/M
3300011270\|Ga0137391_10120352	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2279	Open in IMG/M
3300011271\|Ga0137393_10081757	All Organisms → cellular organisms → Bacteria → Proteobacteria	2600	Open in IMG/M
3300012189\|Ga0137388_10060831	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3106	Open in IMG/M
3300012198\|Ga0137364_10130265	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1802	Open in IMG/M
3300012199\|Ga0137383_10319398	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1137	Open in IMG/M
3300012200\|Ga0137382_10069301	All Organisms → cellular organisms → Bacteria	2257	Open in IMG/M
3300012201\|Ga0137365_10262959	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1282	Open in IMG/M
3300012202\|Ga0137363_11224758	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	637	Open in IMG/M
3300012205\|Ga0137362_10796310	Not Available	810	Open in IMG/M
3300012206\|Ga0137380_11062992	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	690	Open in IMG/M
3300012208\|Ga0137376_10191588	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1767	Open in IMG/M
3300012210\|Ga0137378_10781607	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	867	Open in IMG/M
3300012211\|Ga0137377_10706512	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	943	Open in IMG/M
3300012349\|Ga0137387_10471151	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	911	Open in IMG/M
3300012351\|Ga0137386_11081970	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	567	Open in IMG/M
3300012354\|Ga0137366_10905231	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	620	Open in IMG/M
3300012356\|Ga0137371_10382136	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1093	Open in IMG/M
3300012359\|Ga0137385_10254566	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1519	Open in IMG/M
3300012361\|Ga0137360_10072332	All Organisms → cellular organisms → Bacteria → Proteobacteria	2557	Open in IMG/M
3300012362\|Ga0137361_10676425	Not Available	944	Open in IMG/M
3300012362\|Ga0137361_10964048	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	772	Open in IMG/M
3300012362\|Ga0137361_11242710	Not Available	668	Open in IMG/M
3300012363\|Ga0137390_10075131	All Organisms → cellular organisms → Bacteria	3314	Open in IMG/M
3300012923\|Ga0137359_10245118	All Organisms → cellular organisms → Bacteria → Proteobacteria	1599	Open in IMG/M
3300012923\|Ga0137359_10608644	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	958	Open in IMG/M
3300012923\|Ga0137359_10835724	Not Available	797	Open in IMG/M
3300012929\|Ga0137404_10220245	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1617	Open in IMG/M
3300012929\|Ga0137404_10546503	Not Available	1037	Open in IMG/M
3300012929\|Ga0137404_12314268	Not Available	503	Open in IMG/M
3300012930\|Ga0137407_11051900	Not Available	771	Open in IMG/M
3300012944\|Ga0137410_10426580	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1073	Open in IMG/M
3300012972\|Ga0134077_10368452	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	615	Open in IMG/M
3300012976\|Ga0134076_10525136	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	544	Open in IMG/M
3300013297\|Ga0157378_10802523	Not Available	967	Open in IMG/M
3300014166\|Ga0134079_10246555	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	770	Open in IMG/M
3300014326\|Ga0157380_10131843	Not Available	2133	Open in IMG/M
3300015053\|Ga0137405_1224346	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300015053\|Ga0137405_1248659	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300015053\|Ga0137405_1248660	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	682	Open in IMG/M
3300015264\|Ga0137403_10094348	All Organisms → cellular organisms → Bacteria	3006	Open in IMG/M
3300017657\|Ga0134074_1154652	Not Available	803	Open in IMG/M
3300017659\|Ga0134083_10106001	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1112	Open in IMG/M
3300018431\|Ga0066655_10257735	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1117	Open in IMG/M
3300018433\|Ga0066667_11110965	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	684	Open in IMG/M
3300018433\|Ga0066667_11682299	Not Available	569	Open in IMG/M
3300018468\|Ga0066662_11419722	Not Available	719	Open in IMG/M
3300019789\|Ga0137408_1103854	Not Available	879	Open in IMG/M
3300020170\|Ga0179594_10237725	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	686	Open in IMG/M
3300025905\|Ga0207685_10067981	All Organisms → cellular organisms → Bacteria → Proteobacteria	1434	Open in IMG/M
3300025910\|Ga0207684_10346935	All Organisms → cellular organisms → Bacteria	1278	Open in IMG/M
3300025910\|Ga0207684_10895500	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	746	Open in IMG/M
3300025910\|Ga0207684_10936159	Not Available	727	Open in IMG/M
3300025922\|Ga0207646_10491067	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1107	Open in IMG/M
3300025922\|Ga0207646_11269244	Not Available	644	Open in IMG/M
3300025922\|Ga0207646_11357684	Not Available	619	Open in IMG/M
3300025939\|Ga0207665_10035744	All Organisms → cellular organisms → Bacteria	3300	Open in IMG/M
3300026296\|Ga0209235_1169842	Not Available	825	Open in IMG/M
3300026298\|Ga0209236_1128556	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1107	Open in IMG/M
3300026306\|Ga0209468_1080735	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1084	Open in IMG/M
3300026313\|Ga0209761_1106110	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1393	Open in IMG/M
3300026325\|Ga0209152_10279778	All Organisms → cellular organisms → Bacteria → Proteobacteria	621	Open in IMG/M
3300026332\|Ga0209803_1184150	Not Available	785	Open in IMG/M
3300026333\|Ga0209158_1360772	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	506	Open in IMG/M
3300026529\|Ga0209806_1067754	All Organisms → cellular organisms → Bacteria → Proteobacteria	1616	Open in IMG/M
3300026538\|Ga0209056_10615722	Not Available	547	Open in IMG/M
3300027655\|Ga0209388_1158608	Not Available	638	Open in IMG/M
3300027748\|Ga0209689_1173604	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	988	Open in IMG/M
3300027862\|Ga0209701_10223865	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300027873\|Ga0209814_10390051	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	612	Open in IMG/M
3300029636\|Ga0222749_10760926	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	530	Open in IMG/M
3300031720\|Ga0307469_11298487	Not Available	691	Open in IMG/M
3300031720\|Ga0307469_11559316	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	634	Open in IMG/M
3300031740\|Ga0307468_100301466	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1164	Open in IMG/M
3300031754\|Ga0307475_10498268	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	978	Open in IMG/M
3300031820\|Ga0307473_10755967	Not Available	689	Open in IMG/M
3300031962\|Ga0307479_10510909	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1185	Open in IMG/M
3300032174\|Ga0307470_10019703	All Organisms → cellular organisms → Bacteria	3009	Open in IMG/M
3300032180\|Ga0307471_100566986	All Organisms → cellular organisms → Bacteria → Proteobacteria	1291	Open in IMG/M
3300032180\|Ga0307471_101798087	Not Available	764	Open in IMG/M
3300032205\|Ga0307472_102660110	Not Available	511	Open in IMG/M
3300033412\|Ga0310810_10899313	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	778	Open in IMG/M
3300034817\|Ga0373948_0055789	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	858	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.41%
Host-Associated	Host-Associated	7.59%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.41%
Plants	Host-Associated → Plants	7.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.11%
Loam	Environmental → Terrestrial → Soil → Loam	13.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.63%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.08%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	34.18%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.90%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	28.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	25.32%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.66%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.33%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.33%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.06%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.63%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.63%
Switchgrass Rhizosphere Bulk Soil	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere Bulk Soil	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.63%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005280	Switchgrass rhizosphere microbial community from Michigan, USA - East Lansing bulk soil	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_101113041	3300002558	Grasslands Soil	MTRKELLPKALVTAMMFLTLLGTVGCLTWHQAVMSPAGDVASTIDPGQSAQAKCEDFTCEP*
JGI25382J43887_100947673	3300002908	Grasslands Soil	MTQKELLPHPLATAMMFLILLGTVGCMTWHQAVTSAGDVASTIDPMIDPAEQAKDKCEDFGCEP*
Ga0066674_100939743	3300005166	Soil	MTEKERLPHALVTAMMLLTLLGTVGCMTWHQAVTNAASDVASTIDPAIDPGQSAQAKCEEFNCEP*
Ga0066680_103450521	3300005174	Soil	MTQKERLPHALVTAMMLLTLLGTVGCMTWHQAVTNAASDVASTIDPAIDPGQSAQAKCEEFNCEP*
Ga0066673_105560312	3300005175	Soil	ALVTAMMLLTLLGTVGCMTWHQAVTSAAGDVASTIDPAIDPGQSAQAKCEDFTCEP*
Ga0066679_104802541	3300005176	Soil	LTLLGTVGCMTWHQAVTNAAGDVASTIDPAIDPGQSAQAKCEDFTCEP*
Ga0066690_103426461	3300005177	Soil	MTFLTLLGTVGCMTWHQAVTSAAGDVASMIDPMIDPAEQAKAQCEDFGCEP*
Ga0066688_100661792	3300005178	Soil	MTKKELLPHALVTAMICLTLLATVGCMTWHQTVTSAAGDIASTMDPGQSAKSTCEDFACEP*
Ga0066688_101276032	3300005178	Soil	MTQNERLPHALVTAMMLLTLLGTVGCMTWHQAVTNAASDVASTIDPGQSAQAKCEDFTCEP*
Ga0066688_105948772	3300005178	Soil	LLGTVGCMTWHQAVTSAAGDVASTIDPMIDPAEQAKAQCEDFGCEP*
Ga0066685_101454722	3300005180	Soil	MTQKERLPHALVTAMMFLALLGTVGCMTWHQAVTSAAGDVASTIDPAIDPGQSAQAKCEDFTCEP*
Ga0066678_102745072	3300005181	Soil	MTKKELLPHALVTAMMFLTLLGTVGCMTWHQAVTSAAGDVASPIDPAIDPGQSAQAKCEDFTCEP*
Ga0066678_104874681	3300005181	Soil	MTQKERLPHALVTAMMLLTLLGTVGCMTWHQAVTNAASDVASTIDPAIDPGQSAQAKCEDFTCEP*
Ga0066675_102139552	3300005187	Soil	MTKKELLPHALVTAMMFLTLLATVGCMTWHQTVTSAAGDIASTMDPGQSAKSTCEDFACEP*
Ga0065696_12606323	3300005280	Switchgrass Rhizosphere Bulk Soil	KEPFPNAIVTAMMFVSLLGTVGCMTWHSAVTSAASHVASTIDPAESATAKCQDFSCEP*
Ga0070705_1015539521	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	AMMFLTLLGTVGCMTWHQAVTSAAGDVASTIDPTIDPGQSAKAKCEAFTCEP*
Ga0070708_1006846592	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTPKELLPHALVTATMLLTLLGTVGCMTWHQAVTSAAGDVASTIDPDPSAGAKCEELGCER*
Ga0070708_1007315901	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTQKELLPHALVTAMMVLTLLGTVGCMTWHKAVTSAAGDVASTIDPAIDPGQSAEAKCEDFACEP*
Ga0070708_1022215241	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRSNMTQKELLPKALVTAMMFLTLLGTVGCMTWHQAVTSAAGDVASTIDPAIDPGQSAQAKCEDFTCEP*
Ga0066686_103665002	3300005446	Soil	MTQKELLPHALVTAMMFLTLLGTVGCMTWHQAITSAAGDVASTIDPAIDPGQSAQAKCEDFTCEP*
Ga0066689_105569081	3300005447	Soil	MPSVTERWRSDMTKKELLPHALVTAMMFLTLLGTVGCMTWHQAVTSAAGDVASPIDPAIDPGQSAQAKCEDFTCEP*
Ga0066689_108098451	3300005447	Soil	MTQKELLPHPLATAMMFLILLGTVGCMTWHQAVTSAAGDVASTIDPMIDPAEQAKDKCEDFGCEP*
Ga0070706_1010579311	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTHKELLPHVLVTAMMFLTLLSTVGCMTRHQAVTSAAGDVASTIDPSQAAQAKCEDFSCEW*
Ga0070706_1018363791	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MNPKELLPHALVTATMLLTLLGTVGCMPWHQAVTSAAGDVASTIDPDPSAGAKCEELGCER*
Ga0070699_1021262711	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	AMMFLTLLGTVGCMTWHQAVTSAAGDVASTIDPAIDPGQSAQAKCEDFNCEP*
Ga0070697_1003727461	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTPKELLPHALVTATMLLALLGTVGCMTWHQAVTNAAGDVASTIDPDPSAGAKCEELGCER*
Ga0070697_1020466041	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTQKELLPYALVTAMTFLTVLGTVGCMTTHQAVTSAAGDVASPIDPGQSAQAECTDFGCEP*
Ga0066697_103596732	3300005540	Soil	MTQKERLPHALVTAMMFLTLLATVGCMTWHQTVTSAAGDIASTMDPGQSAKSTCEDFACEP*
Ga0070696_1002609602	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MTQKEPFPNAIVTAMMFVSLLGTVGCMTWHSAVTSAASHVASTIDPAESATA
Ga0070696_1011074982	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MAQKELLPRAVVTAMMFLTLLGTVGCMTWHQAVTSAAGDVASTIDPAEQAKDKCEDFGCEP*
Ga0066701_100469853	3300005552	Soil	MTQKGRLPHALVTAMMFLALLATVGCMTWHQAVTSAAGDVASTIDPAIDPGQSAQAKCEDFTCEP*
Ga0066695_102244191	3300005553	Soil	ERLPHALVTAMMLLTLLGTVGCMTWHQAVTNAASDVASTIDPAIDPGQSAQAKCEEFNCEP*
Ga0066661_104809121	3300005554	Soil	MTQKELLPHALVTAMLLLTLLGTVGCVTWHQAATSAAGDVASTIDPAIDPGQSAQAKCEDFTCEP*
Ga0066704_100416371	3300005557	Soil	FLTLLGTVGCMTWHQAVTSAAGDVASTIDPAIDPGQSAQAKCEDFTCEP*
Ga0066704_104962571	3300005557	Soil	MTQKERLPHALVTAMMLLTLLGTVGCMTWHQAVTNAASDVASTIDPAIDPGQSAQAKCE
Ga0066698_105342111	3300005558	Soil	SNMTQEELLPHALVTAMMFLTLLGTVGCMTWHQAVTSAAGDVASTIDPAIDPGQSAQAKCEEFNCEP*
Ga0066693_104767862	3300005566	Soil	MTQKERLPHALVTAMMFLALLGTVGCMTWHQAVTSAAGDVASTIDPGQSAQAKCEDFTCEP*
Ga0066694_101399792	3300005574	Soil	MTEKERLPHALVTAMMLLTLLGTVGCMTWHQAVTSAAGDVASTIDPGQSAQAKCEDFTCEP*
Ga0066691_102965221	3300005586	Soil	GTMPRVTERWRSNMTQKERLPHALVTAMMLLTLLGTVGCMTWHQAVTNAASDVASTIDPAIDPGQSAQAKCEEFNCEP*
Ga0066654_108388741	3300005587	Soil	MTQKERLPHALVTAMMFLALLGTVGCMTWHQAVTSAAGDVASTIDPAIDPGQSAQAKCEDFT
Ga0066706_110053271	3300005598	Soil	MTQKEPLPLALVTAMMLLTLLGTVGCMTWHQAVTNAASDVASTIDPGQSAQEKCEDFTCEP*
Ga0066651_101751271	3300006031	Soil	MTQKEPLPLALVTAMMLLTLLGTVGCMTWHQAVTNAASDVASTIDPAIDPGQSAQAKCEEFNC
Ga0066656_104505792	3300006034	Soil	MTQKELLPHALVTAMMFLTLLGTVGCMTWHQAITSAAGDVASTIDPAIDPGQSAQAKCE
Ga0066652_1013899571	3300006046	Soil	MTQKEPLPLALVTAMMLLTLLGTVGCMTWHQAVTSAAGDVASTIDPAIDPGQSAQAKC
Ga0066652_1018052551	3300006046	Soil	MTQKERLPHALVTAMMFLALLGTVGCMTWHQAVTSAAGDVASTIDPAIDPGQSAQAKC
Ga0070716_1011643842	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTQKELLPHALVRAMLVLTLLGTVGCMTWHQAVTSAAGDVASTIDPTIDPGQSAKAKCEAFTCEP*
Ga0079222_103505293	3300006755	Agricultural Soil	SVTEPNDGASNMTQKELLPHALATAMMLLTLLGTVGCMTLHQAITSAAGDVARTIDPMIDPAEQANDTCEDFGCER*
Ga0066653_102249503	3300006791	Soil	ELADIKASPTQIVLLTLLGTVGCMTWHQAVTNAASDVASTIDPAIDPGQSAQAKCEEFNCEP*
Ga0066665_100933146	3300006796	Soil	MTQKELLPHALVTAMMLLTLLATVGCMTWHQAVTGAAGDIASTIDPAEQADKCEDFGCEP
Ga0066659_100068761	3300006797	Soil	MTFLTLLGTVGCMTWHEAVTSAAGDVASMIDPMIDPAEQAKAQCEDFGCEP*
Ga0075433_112793512	3300006852	Populus Rhizosphere	MTQKELLPHALATAMMLLTLLGTVGCMTLHQAITSAAGDVARTIDPMIDPAEQANDTCEDFGCER*
Ga0075425_1002989272	3300006854	Populus Rhizosphere	MTQKELLPHALVTAMMVLTLLGTVGCMTWHQAVTSAAGDVASTIDPTIDPGQSAKAKCEAFTCEP*
Ga0075426_103923061	3300006903	Populus Rhizosphere	MTQKELLPYALVTAMTLLTVLGTVGCMTTHQAVTSAAGDVASTIDPGQSVQAKCADFGCEP*
Ga0075424_1006635903	3300006904	Populus Rhizosphere	PHALVTAMMVLTLLGTVGCMTWHQAVTSAAGDVASTIDPTIDPGQSAKAKCEAFTCEP*
Ga0075424_1008094482	3300006904	Populus Rhizosphere	MTQKELLPYALLTAMTFLTVLGVGCMTTHQAVTSAAGDVASTIDPGQSAQAKCADFGCEP
Ga0075424_1023200502	3300006904	Populus Rhizosphere	MLLTLLGTAGCMTWHQAVTSAAGDVASTMDLMIHPAERAKDKCEAFGCEP*
Ga0079219_109479842	3300006954	Agricultural Soil	LLTLLGTVGCMTWHQAVTSAAGDVASTIDPDPSAGAKCEELGCER*
Ga0079219_115468072	3300006954	Agricultural Soil	LPYALVTAMTFLTVLGTVGCTTTHQAVTSAAGDVASTIDPGQSAQAKCADFGCEP*
Ga0075435_1013292512	3300007076	Populus Rhizosphere	SVTGKWRSNMTQKELLPHAFVTAMMLLTLLDTVGCMTWHQVVTSAGGVASTIDPMIAPAEQANDKCEDFGCEP*
Ga0099791_100039312	3300007255	Vadose Zone Soil	MTQKELLPKALVTAMMFLTLLGTVGCMTWHQAVTSAAGDVASTIDPAIDPGQSAQAKCEDFTCEP*
Ga0099793_100767353	3300007258	Vadose Zone Soil	MNQKERLRHALVTAMMFLTLLGTAGCMTWHKAGTNAAGDVASTIDPAIDPGQSAKAKCEAFACEP*
Ga0066710_1006978862	3300009012	Grasslands Soil	MTKKELLPHALVTAMMFLTLLATVGCMTWHQTVTSAAGDIASTMDPGQSAKSTCEDFACE
Ga0066710_1019769041	3300009012	Grasslands Soil	MTQKERLPHALVTAMMFLAFLGTVGCMTWHQAVTSAAGDVASTIDPGQSAQAKCEDFTCE
Ga0066710_1022710531	3300009012	Grasslands Soil	LLPRALVTAMMLLTLLGTVGCMTRHQAVTSAAGDVASTIDPGQSAQSKCEDFGCER
Ga0099829_102344572	3300009038	Vadose Zone Soil	MTQKQLLPHALATAMMFLTLLGTVGCMTWHQAVTSAAGDVASTIDPAIDPGQSAKGKCEDFACEP*
Ga0099827_106440181	3300009090	Vadose Zone Soil	PKDGGPTAMTFLTLLGTVGCMTWHQAVTSAAGDVASTIDPGQSAQAKCEDFTCEP*
Ga0066709_1011762292	3300009137	Grasslands Soil	MLGVTERWRSNMTKKELLPHALVTAMICLTLLATVGCMTWHQTVTSAAGDIASTMDPGQSAKSTCEDFACEP*
Ga0066709_1023754602	3300009137	Grasslands Soil	MRFNMTRKELLPKALVTAMMFLTLLGTVGCMTWHQAVTSAAGDVASTIDPAIDPGQSAQAKCEDFNCEP*
Ga0099792_101780461	3300009143	Vadose Zone Soil	MTQKERLPHALVTAMMLLTLLGTVGCMTWHQAVTNAAGDVASTIDPAIDPGQSAQAKCEDFTCEP*
Ga0134070_101574072	3300010301	Grasslands Soil	MTEKERLPHALVTAMMLLTLLGTVGCMTWHQAVTNAASDVASTIDPAIDPGQSAQAKCEDFTCEP*
Ga0134082_102799491	3300010303	Grasslands Soil	MTQKERLPHALVTAMMFLALLGTVGCMTWHQAVTSAAGDVASTIDPTIDPGQSAKAKCEAFTCEP*
Ga0134109_102017812	3300010320	Grasslands Soil	MTQKERLPHALVTAMMFLALLGTVGCMTWHQAVTNAASDVASTIDPAIDPGQSAQAKCEEFNCEP*
Ga0134084_102918251	3300010322	Grasslands Soil	MTEKERLPHALVTAMMLLTLLGTVGCMTWHQAVTSAAGAVASTIDPAIDPGQSAQAKCEDFTCEP*
Ga0134071_102106552	3300010336	Grasslands Soil	MTRKELLPKALVTAMMFLTLLGTIGCLTWHQAVMSPAGDVASTIDPGQSAQAKCEDFTCEP*
Ga0134122_114830302	3300010400	Terrestrial Soil	MKKKELLPHALVTAMMFLTLLGTVGCMTRHQAVTSAAGDVASTIDPGESAQEKCEDFSCER*
Ga0137392_103419892	3300011269	Vadose Zone Soil	MTQKELLPHALVTAMMFLTLLGTVGCMTWHQAVTSAAGDVASTIDPGQSAQAKCEEFNREP*
Ga0137391_101203525	3300011270	Vadose Zone Soil	MNQKERLRHALVTAMMLLTLLGTVGCMTWHQAVTSAAGDVASTIDPAIDPGQSAQAKCEEFNREP*
Ga0137393_100817572	3300011271	Vadose Zone Soil	MRSNMTQKELLPHALVTAMMLLTLLGTVGCMTWHQAGTNAAGDVASTIDPGQSAQAKCEEFNREP*
Ga0137388_100608316	3300012189	Vadose Zone Soil	AMMFLTLLGTVGCMTWHQAVTSAAGDVASTIDPAIDPGQSAKGKCEDFACEP*
Ga0137364_101302653	3300012198	Vadose Zone Soil	MTEKERLPHALVTAMMLLTLLGTVGCMTWHQAVTSAAGDVASTIDPAIDPGQSAQAKCEDFNCEP*
Ga0137383_103193983	3300012199	Vadose Zone Soil	MTRKELLPKALVTAMMFLTLLGTVGCMTWHQAVTSAAGDVASTIDPAIDPGQSAQAKCEDFTCEP*
Ga0137382_100693013	3300012200	Vadose Zone Soil	MTQKEPLPLALVTAMMLLTLLGTVGCMTWHQAVTNAASDVASTIDPAIDPGQSAQAKCEEFNCEP*
Ga0137365_102629591	3300012201	Vadose Zone Soil	MTQNKRLLPPALVTAMMFLTLLGTAGCMTWLQAATRAAGDVASTIDPGQSAQAKCEDFTCEP*
Ga0137363_112247581	3300012202	Vadose Zone Soil	ERLPHALVTAMMLLTLLGTVGCMTWHRAVMSAAGDVASTIDPAIDPGQSAQAKCEGFTCEP*
Ga0137362_107963102	3300012205	Vadose Zone Soil	MTQKELLPHALVTAMMLLTLLGTVGCITWHQAVTSAAGDVASTIDPAIDPGQSAQAKCEDFTCEP*
Ga0137380_110629922	3300012206	Vadose Zone Soil	MMFLTLLGTVGCMTWHQAVTSAAGDVASTIDPGQSAQAKCEDFTCEP*
Ga0137376_101915882	3300012208	Vadose Zone Soil	MTQKEPLPLALVTAMMLLTLLGTVGCMTWHQAVTNAASDVASTIDPGQSAQAKCEDFTCEP*
Ga0137378_107816073	3300012210	Vadose Zone Soil	HALLTAMMFLALLGTVGCMTWHQAVTSAAGDVASTIDPAIDPGQSAQAKCEDFTCEP*
Ga0137377_107065122	3300012211	Vadose Zone Soil	MTQKEPLPLALVTAMMLLTLLGTVGCMTWHQAVTNAASDVASTIDPGQSAQAKCEEFNCEP*
Ga0137387_104711512	3300012349	Vadose Zone Soil	MLFLTLLGTVGCMTWHQAVTSAAGDVASRIDPAIDPGQSAQAKCEDFTCEP*
Ga0137386_110819701	3300012351	Vadose Zone Soil	MTQKERLPHALVTAMMFLALLGTVGCMTWHQAVTSAAGDVASRIDPAIDPGQSAQAKCEDFTCEP*
Ga0137366_109052311	3300012354	Vadose Zone Soil	MTQNKRLLPPALVTAMMFLTLLGTVGCMTWHQAVTNTASDVASTIDPAIDPGQSAQAKCEDFTCEP*
Ga0137371_103821362	3300012356	Vadose Zone Soil	MTEKERLPHALVTAMMLLTLLGTVGCMTWHQAVTSAASDVASTIDPAIDPGQSAQAKCEDFTCEP*
Ga0137385_102545662	3300012359	Vadose Zone Soil	MTQKEPLPLALVTAMMLLTLLGTVGCMTWHQAVTNTASDVASTIDPAIDPGQSAQAKCEDFTCEP*
Ga0137360_100723323	3300012361	Vadose Zone Soil	MTRKELLPKALVTAMMFLTLLGTVGCMTWHQAVTSAASDVASTIDPAIDPGQSAQAKCEDFTCEP*
Ga0137361_106764252	3300012362	Vadose Zone Soil	MTRKELLPKALVTAMMFLTLLGTVGCMTWHQAVMSPAGDVASTIDPGQSAQAKCEDFTCEP*
Ga0137361_109640482	3300012362	Vadose Zone Soil	MFLTLLGTVGCMTWHQAVTSTAGDVASMIDPGIDPGQSARAKCEDFTCEP*
Ga0137361_112427102	3300012362	Vadose Zone Soil	MTQKEPLPLALVTAMMFLTLLGTVGCMTWHQAGTSAAGDVASTIDPAIDPGQSAQAKCEDFTCEP*
Ga0137390_100751312	3300012363	Vadose Zone Soil	MNQKERLRHALVTAMMFLTLLGTAGCMTWHQAGTNAASDVASTIDPGQSAQAKCEEFNREP*
Ga0137359_102451182	3300012923	Vadose Zone Soil	MTRKELLPKALVTAMMFLTLLGTVGCMTWHQAVTSAAGDVASTIDPAIDPGQSAQAKCEEFNCEP*
Ga0137359_106086442	3300012923	Vadose Zone Soil	MTQKELLPKALVTAMMLLTLLGTVGCSTWHRAVMSAAGDVASPIDPGQSAQAKCEDFTCEP*
Ga0137359_108357242	3300012923	Vadose Zone Soil	MTQKERLPHALVTAMMLLTLLGTVGCMTWHQAVTNAASDVASTIDPAIDPGQSAQ
Ga0137404_102202453	3300012929	Vadose Zone Soil	MTQKERLPHALVTAMMFLTLLGTVGCMTWHQAVTSAAGDVASTIDPGQSAQAKCEDFTCEP*
Ga0137404_105465032	3300012929	Vadose Zone Soil	MTQKERLPHALVTAMMFLALLGTVGCMTWHQAVTSAAGDVASTIDPAIDPGQSAQAKCEEFNCEP*
Ga0137404_123142682	3300012929	Vadose Zone Soil	MLSVIERWSSKMTQKELLPYALVTAMMLLTLLATVGCMTWHQAVTGAAGDIASTIDPAEQADKCEDFGCEP*
Ga0137407_110519002	3300012930	Vadose Zone Soil	MTQKERLPHALVTAMMFLALLGTVGCMTWAPGGHERRRRRREQIDPAIDPGQSAQPKCEDFTCEP*
Ga0137410_104265802	3300012944	Vadose Zone Soil	MTQKERLPHALVTAMMLLALLGTVGCMTWHQAVTSAAGDVASTIDPAIDPGQSAQAKCEDFTCEP*
Ga0134077_103684521	3300012972	Grasslands Soil	MTQKERLPHALVTAMMLLTLLGTVGCMTWHQAVTSAAGDVASTIDPAIDPGQSAQAKCEEFNCEP*
Ga0134076_105251362	3300012976	Grasslands Soil	GTAGCMTWLQAATRAAGDVASTIDPGQSAQAKCEEFNCEP*
Ga0157378_108025232	3300013297	Miscanthus Rhizosphere	MTQKELLPRALVTAMMLLTLLGTVGCMTGHQAVTSAAGDVASTIDPNQSAQSKCEEFGCEP*
Ga0134079_102465552	3300014166	Grasslands Soil	MTQKERLPHALVTAMMFLALLGTVGCMTWHQAVTSAAGDVASTIDPAIDPGQWAQAKCEDFTCEP*
Ga0157380_101318435	3300014326	Switchgrass Rhizosphere	MTQKELLPRALVTAMMLLTLLGTVGCMTGHQAVTSAAGDVARIDPNQSAQSKCEEFGCEP
Ga0137405_12243463	3300015053	Vadose Zone Soil	MTRKELLPKALVTAMMFLTLLGTVGCMTWHQAVMSPSGDVASTIDPGQSAQAKCEDFTCEP*
Ga0137405_12486591	3300015053	Vadose Zone Soil	MFLTLLGTVGCMTWHQAVMSPSGDVASTIDPGQSAQAKCEDFTCEP*
Ga0137405_12486602	3300015053	Vadose Zone Soil	LTLLGTAGCMTWHQAVMSPAGDVASTIAPGQSAQAKCEDFTCEP*
Ga0137403_100943486	3300015264	Vadose Zone Soil	MTFLTLLGTVGCMTWHQAVTSAAGDVASTIDPGQSAQAKCEDFTCEP*
Ga0134074_11546522	3300017657	Grasslands Soil	MTEKERLPHALVTAMMLLTLLGTVGCMTWHQAVTNAASDVASTIDPAIDPGQSAQAKCEDFTCE
Ga0134083_101060012	3300017659	Grasslands Soil	MTEKERLPHALVTAMMFLALLGTVGCMTWHQAVTSAAGDVASTIDPAIDPGQSAQAKCKDFTCEP
Ga0066655_102577352	3300018431	Grasslands Soil	MTQKEPLPHALVTAMMLLTLLGTVGCMSWHQAVTSAAGDVASTIDPAIDPGQSAQAKCEDFTCEP
Ga0066667_111109652	3300018433	Grasslands Soil	MTFLTLLGTVGCMTWHEAVTSAAGDVASMIDPMIDPAEQAKAQCEDFGCEP
Ga0066667_116822991	3300018433	Grasslands Soil	MTQKERLPHALVTAMMFLALLGTVGCMTWHQAVTSAAGDVASTIDPAIDPGQSA
Ga0066662_114197222	3300018468	Grasslands Soil	MTQKERLPHALVTAMMFLALLGTVGCMTWHQAVTSAAGDVASTIDPAIDPGQSAQAKCEDFTCEP
Ga0137408_11038541	3300019789	Vadose Zone Soil	MTQKERLPHALVTAMMFLTLLGTVGCMTWHQAVTSAAGDVASTIDPGQSAQAKCEDFTCE
Ga0179594_102377251	3300020170	Vadose Zone Soil	QKERLPHALVTAMMLLTLLGTVGCMTWHQAVTNAASDVASTIDPAIDPGQSAQAKCEDFTCEP
Ga0207685_100679812	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MTQKELLPHALVRAMLVLTLLGTVGCMTWHQAVTSAAGDVASTIDPTIDPGQSAKAKCEAFTCEP
Ga0207684_103469353	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTPKELLPHALVTATMLLTLLGTVGCMTWHQAVTSAAGDVASTIDPDPSAGAKCEELGCE
Ga0207684_108955002	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTQKELLPHALVTAMMVLTLLGTVGCMTWHKAVTSAAGDVASTIDPAIDPGQSAEAKCEDFACEP
Ga0207684_109361591	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTQKELLPHALATAMMFLTLLGTVGCMTWHQAVTSAAGDVASTIDPAIDPGQS
Ga0207646_104910672	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTHKELLPHVLVTAMMFLTLLSTVGCMTRHQAVTSAAGDVASTIDPSQAAQAKCEDFSCE
Ga0207646_112692441	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTQKELLPHALVTAMMVLTLLGTVGCMTWHKAVTSAAGDVASTIDPAIDPGQSAQAKCEEFNCEP
Ga0207646_113576841	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTPKELLPHALVTATMLLTLLGTVGCMPWHQAVTSAAGDVPSTIDPDPSAGAKCEELGCE
Ga0207665_100357445	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MTQKELLPHALVRAMLVLTLLGTVGCMMTWHQAVTSAAGDVASTIDPTIDPGQSAKAKCEDFTCEP
Ga0209235_11698422	3300026296	Grasslands Soil	MTQKERLPHALVTAMMFLALLGTVGCMTWHQAVTSAAGDVASTIDPMIDPAEQAKDKCEDFGCEP
Ga0209236_11285562	3300026298	Grasslands Soil	MTRKELLPKALVTAMMFLTLLGTVGCLTWHQAVMSPAGDVASTIDPGQSAQAKCEDFTCE
Ga0209468_10807351	3300026306	Soil	MTEKERLPHALVTAMMLLTLLGTVGCMTWHQAVTNAASDVASTIDPAIDPGQSAQAKCEEFNCEP
Ga0209761_11061101	3300026313	Grasslands Soil	MTQKELLPHPLATAMMFLILLGTVGCMTWHQAVTSAAGDVASTIDPMIDPAEQAKDKCEDFGCEP
Ga0209152_102797782	3300026325	Soil	MTQKERLPHALVTAMMLLTLLGTVGCMTWHQAVTNAASDVASTIDPAIDPGQSAQAKCEDFTCEP
Ga0209803_11841502	3300026332	Soil	MTQKERLPHALVTAMMLLTLLGTVGCMTWHQAVTNAASDVASTIDPAIDPGQSAQAKCEEFNCEP
Ga0209158_13607722	3300026333	Soil	MTQNERLPHALVTAMMLLTLLGTVGCMTWHQAVTNAASDVASTIDPAIDPGQSAQAKCEEFNCEP
Ga0209806_10677542	3300026529	Soil	MTQKERLPHALVTAMMLLTLLGTVGCMTWHEAVTSAAGDVASMIDPMIDPAEQAKAQCEDFGCEP
Ga0209056_106157221	3300026538	Soil	MTQKEPLPLALVTAMMLLTLLGTVGCMTWHQAVTNAASDVASTIDPGQSAQAKCEDFTCE
Ga0209388_11586081	3300027655	Vadose Zone Soil	MTQKELLPKALVTAMMFLTLLGTVGCMTWHQAVTSAAGDVASTIDPGQSTKGKCEDF
Ga0209689_11736042	3300027748	Soil	MTQKERLPHALVTAMMLLTLLGTVGCMTWHQAVTNAASDVASTIDPGQSAQAKCEDFNCE
Ga0209701_102238651	3300027862	Vadose Zone Soil	TAMMFLTLLGTVGCMTWHQAVTSAAGDVASTIDPAIDPGQSAKGKCEDFACEP
Ga0209814_103900512	3300027873	Populus Rhizosphere	MTQKELLPHALATAMMLLTLLGTVGCMTLHQAITSAAGDVARTIDPMIDPAEQANDTCEDFGCER
Ga0222749_107609261	3300029636	Soil	LLPHAPVTAMMFLTLLATVGCMTRHPAVTSAASDVASTIDPGQSAKSKCEDFGCES
Ga0307469_112984872	3300031720	Hardwood Forest Soil	MTPKELLPHALVTATMLLTLLGTVGCMTWHQAVTSAASNVASTIDPEPSAGAKC
Ga0307469_115593162	3300031720	Hardwood Forest Soil	MTQKELLPHALATAMMFLTLLGTVGCMTWHQAVTSAAGDVASTIDPAIDPGQSAQAKCEDFTCEP
Ga0307468_1003014662	3300031740	Hardwood Forest Soil	MTQKELLPYALVTAMTFLTVLGTVGCMTTHQAVTSAAGDVASTIDPAEQANDKCEDFSCE
Ga0307475_104982681	3300031754	Hardwood Forest Soil	MTQKERLPHALMTAMMLLTLLGAVGCMTRHQAVTSAAGDVASTIDPGQSAQAKCEDFTCE
Ga0307473_107559671	3300031820	Hardwood Forest Soil	MTEKERLPHALMTAMMLLTLLGTVGCMTRHQAVTSAAGDVASTIDPGQSAETKCEEFGCE
Ga0307479_105109093	3300031962	Hardwood Forest Soil	MTQKERLPHALVTAMMLLTLLGTAGCMTWHQAVTNAASDVASTIDPAIDPGQSAQAKCEEFNCEP
Ga0307470_100197032	3300032174	Hardwood Forest Soil	MTQKELLPHALVRAMLVLTLLGTVGCMTWHQAVTSAAGDVASTINPMIDPAEQANDKCEDFCCEP
Ga0307471_1005669862	3300032180	Hardwood Forest Soil	MTQKELLLHALVTAMMFLTLLGTVGCMTWHQAVTSTAGDVASTIDPAIDPGQSAQAKCEDFTCEP
Ga0307471_1017980871	3300032180	Hardwood Forest Soil	MTQKELDSHALVTAMMFLTLLGTVGCVTWHRAVTSAPGDVVSTIDPGQSAQTKCEDFT
Ga0307472_1026601101	3300032205	Hardwood Forest Soil	MTQKELLPYALVTAMTFLTVLGTVGCMTTHQAVTSAAGDVASKIDPGQSANDK
Ga0310810_108993133	3300033412	Soil	TVGCMTWHSAVTSAASHVASTIDPGEKATAKCQDFSCEP
Ga0373948_0055789_20_205	3300034817	Rhizosphere Soil	MTQKGPLPNAIVTAMMFVSLLGTVGCMTWHSAVTSAASHVASTIDPAESATAKCQDFSCE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F042503

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences