NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F042590

Metagenome Family F042590

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F042590
Family Type Metagenome
Number of Sequences 158
Average Sequence Length 72 residues
Representative Sequence RALGAECHVTGDTVRAVLSEANQDAAIEALRRERLRLISVTPVRTSLEDYFLQKLQPAEARAGARA
Number of Associated Samples 132
Number of Associated Scaffolds 158

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.66 %
% of genes near scaffold ends (potentially truncated) 95.57 %
% of genes from short scaffolds (< 2000 bps) 86.08 %
Associated GOLD sequencing projects 127
AlphaFold2 3D model prediction Yes
3D model pTM-score0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (96.203 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(17.089 % of family members)
Environment Ontology (ENVO) Unclassified
(29.747 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(48.101 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 30.85%    β-sheet: 10.64%    Coil/Unstructured: 58.51%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.53
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 158 Family Scaffolds
PF12679ABC2_membrane_2 88.61
PF00072Response_reg 1.27
PF13414TPR_11 1.27
PF12730ABC2_membrane_4 1.27
PF03466LysR_substrate 0.63
PF02142MGS 0.63
PF12543DUF3738 0.63
PF03548LolA 0.63

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 158 Family Scaffolds
COG2834Outer membrane lipoprotein-sorting proteinCell wall/membrane/envelope biogenesis [M] 0.63

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms96.20 %
UnclassifiedrootN/A3.80 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004635|Ga0062388_100132754All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1854Open in IMG/M
3300004635|Ga0062388_102283713All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter564Open in IMG/M
3300004635|Ga0062388_102319906All Organisms → cellular organisms → Bacteria → Acidobacteria560Open in IMG/M
3300005167|Ga0066672_10203154All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1263Open in IMG/M
3300005176|Ga0066679_10939951All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter542Open in IMG/M
3300005179|Ga0066684_10423069All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter895Open in IMG/M
3300005329|Ga0070683_100176040All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter2031Open in IMG/M
3300005332|Ga0066388_107874300All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter533Open in IMG/M
3300005440|Ga0070705_100431836All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter983Open in IMG/M
3300005445|Ga0070708_100043113All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter3964Open in IMG/M
3300005450|Ga0066682_10314073All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1011Open in IMG/M
3300005454|Ga0066687_10298551All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter912Open in IMG/M
3300005518|Ga0070699_101631092All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter591Open in IMG/M
3300005536|Ga0070697_100198379All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1705Open in IMG/M
3300005536|Ga0070697_100957042All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter760Open in IMG/M
3300005536|Ga0070697_101090329All Organisms → cellular organisms → Bacteria711Open in IMG/M
3300005539|Ga0068853_100063560All Organisms → cellular organisms → Bacteria3197Open in IMG/M
3300005542|Ga0070732_10952244All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter525Open in IMG/M
3300005545|Ga0070695_100377033All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1069Open in IMG/M
3300005545|Ga0070695_101439233All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter572Open in IMG/M
3300005552|Ga0066701_10080728All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1864Open in IMG/M
3300005556|Ga0066707_10274259All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1103Open in IMG/M
3300005557|Ga0066704_10682998All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter649Open in IMG/M
3300005566|Ga0066693_10436824All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter535Open in IMG/M
3300005586|Ga0066691_10564176All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter678Open in IMG/M
3300005587|Ga0066654_10297861All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter864Open in IMG/M
3300005602|Ga0070762_10031777All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter2829Open in IMG/M
3300005764|Ga0066903_100110071All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter3773Open in IMG/M
3300006041|Ga0075023_100205684All Organisms → cellular organisms → Bacteria → Acidobacteria762Open in IMG/M
3300006046|Ga0066652_100696484All Organisms → cellular organisms → Bacteria966Open in IMG/M
3300006163|Ga0070715_10685476All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium610Open in IMG/M
3300006173|Ga0070716_100076201All Organisms → cellular organisms → Bacteria → Acidobacteria1987Open in IMG/M
3300006174|Ga0075014_100383312All Organisms → cellular organisms → Bacteria → Acidobacteria762Open in IMG/M
3300006176|Ga0070765_100185530All Organisms → cellular organisms → Bacteria → Acidobacteria1879Open in IMG/M
3300006796|Ga0066665_11009789All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300006806|Ga0079220_11585433All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300006903|Ga0075426_10884957All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300009012|Ga0066710_100606906All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1660Open in IMG/M
3300009088|Ga0099830_10346299All Organisms → cellular organisms → Bacteria → Acidobacteria1194Open in IMG/M
3300009088|Ga0099830_10631889All Organisms → cellular organisms → Bacteria → Acidobacteria879Open in IMG/M
3300009137|Ga0066709_102682164All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium665Open in IMG/M
3300009176|Ga0105242_10598587All Organisms → cellular organisms → Bacteria → Acidobacteria1064Open in IMG/M
3300009177|Ga0105248_10038170All Organisms → cellular organisms → Bacteria → Acidobacteria5375Open in IMG/M
3300009520|Ga0116214_1139325All Organisms → cellular organisms → Bacteria → Acidobacteria900Open in IMG/M
3300009525|Ga0116220_10199160All Organisms → cellular organisms → Bacteria → Acidobacteria867Open in IMG/M
3300009839|Ga0116223_10115151All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium1691Open in IMG/M
3300010358|Ga0126370_12616005All Organisms → cellular organisms → Bacteria → Acidobacteria505Open in IMG/M
3300010376|Ga0126381_100021932All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae7501Open in IMG/M
3300010397|Ga0134124_10847786All Organisms → cellular organisms → Bacteria → Acidobacteria917Open in IMG/M
3300010937|Ga0137776_1865364All Organisms → cellular organisms → Bacteria → Acidobacteria670Open in IMG/M
3300011269|Ga0137392_10363091All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1200Open in IMG/M
3300011270|Ga0137391_10678259All Organisms → cellular organisms → Bacteria → Acidobacteria858Open in IMG/M
3300012096|Ga0137389_10228558All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1557Open in IMG/M
3300012096|Ga0137389_10478205All Organisms → cellular organisms → Bacteria → Acidobacteria1068Open in IMG/M
3300012189|Ga0137388_10026700All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis4436Open in IMG/M
3300012189|Ga0137388_10189210All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1849Open in IMG/M
3300012198|Ga0137364_10894099All Organisms → cellular organisms → Bacteria → Acidobacteria672Open in IMG/M
3300012198|Ga0137364_11151054All Organisms → cellular organisms → Bacteria → Acidobacteria583Open in IMG/M
3300012202|Ga0137363_10171801All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1719Open in IMG/M
3300012205|Ga0137362_10167171All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1887Open in IMG/M
3300012207|Ga0137381_10918877All Organisms → cellular organisms → Bacteria → Acidobacteria756Open in IMG/M
3300012210|Ga0137378_10833443All Organisms → cellular organisms → Bacteria → Acidobacteria835Open in IMG/M
3300012285|Ga0137370_11047539All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium501Open in IMG/M
3300012285|Ga0137370_11048869All Organisms → cellular organisms → Bacteria → Acidobacteria501Open in IMG/M
3300012351|Ga0137386_10632182All Organisms → cellular organisms → Bacteria → Acidobacteria770Open in IMG/M
3300012363|Ga0137390_10137575All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter2424Open in IMG/M
3300012918|Ga0137396_10794268All Organisms → cellular organisms → Bacteria → Acidobacteria696Open in IMG/M
3300012923|Ga0137359_11582673All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium543Open in IMG/M
3300012925|Ga0137419_11144429All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis650Open in IMG/M
3300012927|Ga0137416_12109571All Organisms → cellular organisms → Bacteria → Acidobacteria518Open in IMG/M
3300012944|Ga0137410_10131251All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1890Open in IMG/M
3300012948|Ga0126375_10679911All Organisms → cellular organisms → Bacteria → Acidobacteria798Open in IMG/M
3300012948|Ga0126375_11104659All Organisms → cellular organisms → Bacteria → Acidobacteria653Open in IMG/M
3300012961|Ga0164302_11805040All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium516Open in IMG/M
3300012980|Ga0168315_120366All Organisms → cellular organisms → Bacteria → Acidobacteria610Open in IMG/M
3300012988|Ga0164306_11788714All Organisms → cellular organisms → Bacteria → Acidobacteria534Open in IMG/M
3300012989|Ga0164305_11701455All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis566Open in IMG/M
3300014056|Ga0120125_1114886All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae638Open in IMG/M
3300015359|Ga0134085_10024080All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2337Open in IMG/M
3300017933|Ga0187801_10202321All Organisms → cellular organisms → Bacteria → Acidobacteria787Open in IMG/M
3300017933|Ga0187801_10439667All Organisms → cellular organisms → Bacteria → Acidobacteria546Open in IMG/M
3300017942|Ga0187808_10251615All Organisms → cellular organisms → Bacteria → Acidobacteria791Open in IMG/M
3300017966|Ga0187776_10177436All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1327Open in IMG/M
3300017974|Ga0187777_10592558All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis780Open in IMG/M
3300018034|Ga0187863_10421748All Organisms → cellular organisms → Bacteria → Acidobacteria744Open in IMG/M
3300018058|Ga0187766_11035743All Organisms → cellular organisms → Bacteria → Acidobacteria586Open in IMG/M
3300018058|Ga0187766_11163230All Organisms → cellular organisms → Bacteria → Acidobacteria557Open in IMG/M
3300018058|Ga0187766_11373559All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis517Open in IMG/M
3300018086|Ga0187769_10030275All Organisms → cellular organisms → Bacteria → Acidobacteria3668Open in IMG/M
3300018090|Ga0187770_10034399All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3569Open in IMG/M
3300018431|Ga0066655_10366533All Organisms → cellular organisms → Bacteria → Acidobacteria948Open in IMG/M
3300018433|Ga0066667_10396796All Organisms → cellular organisms → Bacteria → Acidobacteria1113Open in IMG/M
3300018482|Ga0066669_10781081All Organisms → cellular organisms → Bacteria → Acidobacteria844Open in IMG/M
3300019865|Ga0193748_1024088All Organisms → cellular organisms → Bacteria → Acidobacteria573Open in IMG/M
3300019878|Ga0193715_1085865All Organisms → cellular organisms → Bacteria → Acidobacteria648Open in IMG/M
3300019887|Ga0193729_1250930All Organisms → cellular organisms → Bacteria → Acidobacteria560Open in IMG/M
3300020022|Ga0193733_1056819All Organisms → cellular organisms → Bacteria → Acidobacteria1103Open in IMG/M
3300020582|Ga0210395_11327283All Organisms → cellular organisms → Bacteria → Acidobacteria526Open in IMG/M
3300020583|Ga0210401_10518848All Organisms → cellular organisms → Bacteria → Acidobacteria1054Open in IMG/M
3300021170|Ga0210400_10302963All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1312Open in IMG/M
3300021178|Ga0210408_10149798All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1848Open in IMG/M
3300021178|Ga0210408_10322839All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1231Open in IMG/M
3300021181|Ga0210388_10093850All Organisms → cellular organisms → Bacteria → Acidobacteria2562Open in IMG/M
3300021406|Ga0210386_10796483All Organisms → cellular organisms → Bacteria → Acidobacteria812Open in IMG/M
3300021420|Ga0210394_10184568All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1817Open in IMG/M
3300021420|Ga0210394_11481819All Organisms → cellular organisms → Bacteria → Acidobacteria574Open in IMG/M
3300021420|Ga0210394_11771975All Organisms → cellular organisms → Bacteria → Acidobacteria515Open in IMG/M
3300021432|Ga0210384_10754875All Organisms → cellular organisms → Bacteria → Acidobacteria869Open in IMG/M
3300021432|Ga0210384_11627554All Organisms → cellular organisms → Bacteria → Acidobacteria551Open in IMG/M
3300021445|Ga0182009_10200455All Organisms → cellular organisms → Bacteria → Acidobacteria971Open in IMG/M
3300021477|Ga0210398_11550931All Organisms → cellular organisms → Bacteria → Acidobacteria514Open in IMG/M
3300021478|Ga0210402_10769232All Organisms → cellular organisms → Bacteria → Acidobacteria888Open in IMG/M
3300021559|Ga0210409_10521836All Organisms → cellular organisms → Bacteria → Acidobacteria1052Open in IMG/M
3300025898|Ga0207692_10758136All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis633Open in IMG/M
3300025906|Ga0207699_11326053All Organisms → cellular organisms → Bacteria → Acidobacteria533Open in IMG/M
3300025927|Ga0207687_10233935All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1453Open in IMG/M
3300025939|Ga0207665_10031048All Organisms → cellular organisms → Bacteria3534Open in IMG/M
3300026041|Ga0207639_10540205All Organisms → cellular organisms → Bacteria → Acidobacteria1069Open in IMG/M
3300026281|Ga0209863_10116077All Organisms → cellular organisms → Bacteria → Acidobacteria786Open in IMG/M
3300026308|Ga0209265_1234735All Organisms → cellular organisms → Bacteria → Acidobacteria507Open in IMG/M
3300026328|Ga0209802_1236496All Organisms → cellular organisms → Bacteria → Acidobacteria646Open in IMG/M
3300026332|Ga0209803_1120733All Organisms → cellular organisms → Bacteria → Acidobacteria1048Open in IMG/M
3300026542|Ga0209805_1274753All Organisms → cellular organisms → Bacteria → Acidobacteria646Open in IMG/M
3300026557|Ga0179587_10181686All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1325Open in IMG/M
3300027548|Ga0209523_1108157All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300027604|Ga0208324_1064653All Organisms → cellular organisms → Bacteria → Acidobacteria1049Open in IMG/M
3300027826|Ga0209060_10327059All Organisms → cellular organisms → Bacteria → Acidobacteria699Open in IMG/M
3300027846|Ga0209180_10373419All Organisms → cellular organisms → Bacteria → Acidobacteria811Open in IMG/M
3300027862|Ga0209701_10339634All Organisms → cellular organisms → Bacteria → Acidobacteria853Open in IMG/M
(restricted) 3300031150|Ga0255311_1133138All Organisms → cellular organisms → Bacteria → Acidobacteria548Open in IMG/M
3300031708|Ga0310686_118892155All Organisms → cellular organisms → Bacteria → Acidobacteria851Open in IMG/M
3300031720|Ga0307469_10166683All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1674Open in IMG/M
3300031820|Ga0307473_10341497All Organisms → cellular organisms → Bacteria → Acidobacteria959Open in IMG/M
3300031820|Ga0307473_11080429All Organisms → cellular organisms → Bacteria → Acidobacteria590Open in IMG/M
3300031918|Ga0311367_11170715All Organisms → cellular organisms → Bacteria → Acidobacteria764Open in IMG/M
3300031962|Ga0307479_11228430All Organisms → cellular organisms → Bacteria → Acidobacteria712Open in IMG/M
3300032160|Ga0311301_11367000All Organisms → cellular organisms → Bacteria → Acidobacteria887Open in IMG/M
3300032180|Ga0307471_100587457All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1272Open in IMG/M
3300032205|Ga0307472_100009363All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis4835Open in IMG/M
3300032205|Ga0307472_100091244All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2063Open in IMG/M
3300032205|Ga0307472_101493890All Organisms → cellular organisms → Bacteria → Acidobacteria659Open in IMG/M
3300032205|Ga0307472_102671550All Organisms → cellular organisms → Bacteria → Acidobacteria510Open in IMG/M
3300032782|Ga0335082_10243207All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1684Open in IMG/M
3300032783|Ga0335079_12376913All Organisms → cellular organisms → Bacteria → Acidobacteria501Open in IMG/M
3300032805|Ga0335078_11602784All Organisms → cellular organisms → Bacteria → Acidobacteria720Open in IMG/M
3300032805|Ga0335078_11934463All Organisms → cellular organisms → Bacteria → Acidobacteria634Open in IMG/M
3300032828|Ga0335080_10384387All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1509Open in IMG/M
3300032829|Ga0335070_10306418All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1538Open in IMG/M
3300032892|Ga0335081_11710483All Organisms → cellular organisms → Bacteria → Acidobacteria685Open in IMG/M
3300032892|Ga0335081_12101187All Organisms → cellular organisms → Bacteria → Acidobacteria599Open in IMG/M
3300033158|Ga0335077_10494589All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1295Open in IMG/M
3300033289|Ga0310914_10187704All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1842Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil17.09%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil10.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil10.76%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere8.23%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil6.33%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.06%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland4.43%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil3.16%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.16%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment2.53%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.53%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.90%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.90%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.90%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.27%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.27%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.27%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.27%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland0.63%
SedimentEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment0.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.63%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.63%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.63%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.63%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.63%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil0.63%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.63%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.63%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.63%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.63%
Weathered Mine TailingsEnvironmental → Terrestrial → Geologic → Mine → Unclassified → Weathered Mine Tailings0.63%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.63%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.63%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004635Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006041Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006057Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006174Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009520Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaGEnvironmentalOpen in IMG/M
3300009525Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaGEnvironmentalOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010937Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012980Weathered mine tailings microbial communities from Hibbing, Minnesota, USA - DCW15EnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300014056Permafrost microbial communities from Nunavut, Canada - A20_5cm_0MEnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017942Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3EnvironmentalOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300018006Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4EnvironmentalOpen in IMG/M
3300018034Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10EnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300018090Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019865Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s1EnvironmentalOpen in IMG/M
3300019878Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2EnvironmentalOpen in IMG/M
3300019887Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2EnvironmentalOpen in IMG/M
3300020022Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026281Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)EnvironmentalOpen in IMG/M
3300026308Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)EnvironmentalOpen in IMG/M
3300026328Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027548Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027604Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027826Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300031150 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031918III_Fen_N3 coassemblyEnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300032829Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
Ga0062388_10013275413300004635Bog Forest SoilPASMKALGAECHVTGDTVRAVLPENQQDAAIDALRRERIRLIAITPLRTSLEAYFVEKMQVEKMQQSQTAGKTS*
Ga0062388_10228371313300004635Bog Forest SoilMLSEANQDAAIDALRRERLRLVSVTPVRTSLEDYYLQKLQPANTTLGAGAKAETAVGSTL
Ga0062388_10231990613300004635Bog Forest SoilKNIAPDCRVTGDTVRAIVLETIQDALIDALRRERLHIVSVTPLRTSLEEYFVQKLKPSEAAAGVRG*
Ga0066672_1020315413300005167SoilADLTSSMQDRVEIVWQGSVPTSIAALGAECHLTGDTVRAVLPAEKQDAAIEILRREKLRLISVVPVRATLEDYFLQKLKPAATPLEVMA*
Ga0066679_1093995123300005176SoilVTGDTVRAVVPEEKQDAALDLLHREGLRLVSLVPVRASLEDYFVQKLKQVDKMQGVIV*
Ga0066684_1042306923300005179SoilSSVHGKVELVWQGTKVPQSLRTLDAECHVTGDTVRAVIPETRQDAAMEALRREGLRLISLTPVRMSLEDYFVQQLKPSEAAMQVTS*
Ga0070683_10017604013300005329Corn RhizosphereTGNTVRAVLSEANQDTALEALRRERLRLISVTPVRTSLEDYFMQKLQPAGATVGGRA*
Ga0066388_10787430013300005332Tropical Forest SoilPAAIKALGAECHVSGETVRAVLPEDRQESAIDALRRERLRLISVVPVRTSLEDYFVEKLKPAEAKAGVRS*
Ga0070705_10043183613300005440Corn, Switchgrass And Miscanthus RhizosphereAMLSEANQDAAIEALRRERLRLVSVTPVRTSLEDYYLQKLQPPNATVRVGAKVGTTV*
Ga0070708_10004311353300005445Corn, Switchgrass And Miscanthus RhizosphereSSVHGKVELIWQGTKVPQSLRTLDAECHVTGDTVRAVIPESRQDAAMEALRREGLRLISLTPVRMSLEDYFVQQLKPSEAAVGMTS*
Ga0066682_1031407323300005450SoilHGATVPRALQTMGAECHITGDTVRALVPETHQDAALDALRCEQLRLISLTPVRSSLEDYFVEKLKTEQPLAEVRS*
Ga0066687_1029855113300005454SoilDVVPSAIVAMGAEYHVTGDTVRAVLPEDNQDAAIDVLRREHLRLISVVPVRASLEDYFVQKLRPAEVPVEVRA*
Ga0070699_10163109223300005518Corn, Switchgrass And Miscanthus RhizosphereVPGSLKALGAEYHVTGDTVRAVIPEGRQDAALEALRREGLRLISLTPVRMSLEDYFVQQLTPSEAAVEVNS*
Ga0070697_10019837933300005536Corn, Switchgrass And Miscanthus RhizosphereSVQGRVEIVWQGTVVPPSIRALGAECHITGDTVRAVLPEENQDAAIEALRREHLRLISVIPVRASLEDYFVQKLKPEEKMAGVTA*
Ga0070697_10095704223300005536Corn, Switchgrass And Miscanthus RhizosphereLVWQGTTVPASLRALRAECHVTGDTVRAVLSEADQDAAIETLRRERLRLISVTPVRTSLEDYFIQKLEPAEAAAGVRS*
Ga0070697_10109032923300005536Corn, Switchgrass And Miscanthus RhizosphereVTGDTVRAIVSETRQDAAMEALRREGLRLISLTPVRMSLEDYFVQQLKPAEATVEVTS*
Ga0070730_1063545513300005537Surface SoilSEYHVTGDTVRAMVLEGNQDAVIDGLRREHLRLISVTPVRTTLEEYFVKKVRPSHAVAGARR*
Ga0068853_10006356013300005539Corn RhizosphereRALGAECHITGNTVRAVVSEANQDTALEALRRERLRLISVTPVRTSLEDYFMQKLQPAGATVGGRA*
Ga0070732_1095224413300005542Surface SoilGTLVPASLKNLGECHVTGDTVRAVIAEEDQEVAVDALRREKLRLVSLVPVRASLEDYFLQKLKQVDKMQGVIA*
Ga0070695_10037703323300005545Corn, Switchgrass And Miscanthus RhizosphereGAECHIIGNTVRAVLSEANQDTALEALRRERLRLISVTPVRTSLEDYFMQKLQPAGATVGGRA*
Ga0070695_10143923323300005545Corn, Switchgrass And Miscanthus RhizosphereIGAVADLTSSVHGKVELVWPGRAVPQSFKALGAECHVTGDTVRAIVSEERQEAAMQALQREGLRLISLTPVRMSLEDYFVQQLKPSDTTVEVTL*
Ga0066701_1008072833300005552SoilLKALGAECHVTGDTVRAVISEARQNSALEALRREGLRLISLTPVRMSLEDYFVQQLKPSEAAVEVTS*
Ga0066707_1027425933300005556SoilSLKALEAECHVTGDTVRAVLPEENQDAAIDALRREHLRLISLIPVRASLEDYFVQKLAPREKVEGVTV*
Ga0066704_1068299823300005557SoilGVGVVADLTSSVHGRVEMVWQGTVVPPSIRALGAECHVTGDTVRAVLAEENQDAAIETLRREHLRLISVIPVRASLEDYFVQKLKPEEKMAGVTA*
Ga0066693_1043682423300005566SoilLQGLGAECHVTGDTARALIPESSQDAALDALRRERLHLVSVMPVRTSLEDYFVQKLRPAQTMAGSRA*
Ga0066691_1056417613300005586SoilVPGSLKALGAECHVTGDTVRAVISEARQNSALEALRREGLRLISLTPVRMSLEDYFVQQLKPSEAAVEVTS*
Ga0066654_1029786123300005587SoilCHVTGDTVRAVLPEDKQDAAIEILRRERLRLISVTPVRASLEDYFVQKLQPAVSVGARS*
Ga0070762_1003177713300005602SoilNVKTLSPTCRVTGDTVRAVVPEASQDGLVDALRRERIHIVSVTPLRTSLEEYFVQKLKPSGAAAGVRA*
Ga0066903_10011007113300005764Tropical Forest SoilIWRGNSIPAILRGLGAECHVTGDTVRAVLPESSQEAVLDALRRERLQLVSLMPVRTSLEDYFLQKLRPAQTMAGSTA*
Ga0075023_10020568413300006041WatershedsLGAECHVTGDTVRAIVSEANQDASIEALRRERLRLISVTPVRTSLEDYFMQKLQPAEATTGARA*
Ga0066652_10069648413300006046SoilVWEGTKVPQSLRTLDAECHVTGDTVRAVIPEARQDVALEALKREGLRLISLTPVRMSLEDYFVQQLKPSEAAMQVTS*
Ga0075026_10041089513300006057WatershedsVRAVLSEANQDTALEALRRERLRLISVTPVRNSLEDYFIQKLRPAEATVGAKA*
Ga0070715_1068547623300006163Corn, Switchgrass And Miscanthus RhizosphereADLTSSVHSKVELVWQGPAVPASLRALGAECHGTGDTVRAILSEANQDAAIEALRRERLRLVSVTPVRTSLEDYFMQKLQQPAAAQSGARA*
Ga0070716_10007620113300006173Corn, Switchgrass And Miscanthus RhizosphereVPALLRALGAECHVTGDTVRAILSEANQDAAIEALRRERLRLVSVTPVRTSLEDYFMQKLQQPAAAQSGARA*
Ga0075014_10038331213300006174WatershedsKVPASLNALGAECHVTGDTVRAVLLEGNQEAALEALRREQLRIISLIPVRTSLEEYFVRKLQPSRAAAGVTK*
Ga0070765_10018553013300006176SoilPASLKALGADCHVTGDTVRAVLLEGNQDAALEALRREQLRIVSLIPVRTSLEEYFVRKLQPSKAVAGVTQ*
Ga0066665_1100978913300006796SoilTRVPQSLRALDAECHVTGETVRAVIPEVRQDAALEALRREGLRLISLTPVRMSLEDYFVQQLKPSEAAVEVTS*
Ga0079220_1158543313300006806Agricultural SoilHVTGDTVRAIVSEERQEAAMQALQREGLRLISLTPVRMSLEDYFVQQLKPSDTTVEVTL*
Ga0075426_1088495713300006903Populus RhizosphereSLRALGAECHIIGNTVRAVLSEANQDTALEALRRERLRLISVTPVRTSLEDYFMQKLQPAGATVGGRA*
Ga0066710_10060690613300009012Grasslands SoilKSVPASLRALGAECHILGDTVRAVLSEANQEAAIDALRRERLRLISVTPVRTSLEDYFVQKLQDMEAIAG
Ga0099830_1034629933300009088Vadose Zone SoilWQTTRVPASIKALAAECHVTGDTVRAVLPEENQDAAIDALRREHLQLISLIPVRASLEDYFVQKLKSAEKMEGVTV*
Ga0099830_1063188913300009088Vadose Zone SoilTGDTVRAVISEARQNSALEALRREGLRLISLTPVRMSLEDYFVQQLKPSEAAVEVTS*
Ga0066709_10268216423300009137Grasslands SoilVHDKVELIWQGSAVPQSLRTLGAECHITGDTVRAIVSETRQDAALDALRREGLRLISLTPVRMSLEDYLVQQLKPAEATVEVTS*
Ga0105242_1059858733300009176Miscanthus RhizosphereVWQGTVVPASLRALGAECHVTRDTVRAMLSEANQDAAIEALRRERLRLVSVTPVRTSLEDYYLQKLQPPNATVRVGAKVGTTV*
Ga0105248_1003817013300009177Switchgrass RhizosphereSLRALGAECHIIGSTVRAVLSEANQDTALEALRRERLRLISVTPVRTSLEDYFMQKLQPAGATVGGRA*
Ga0116214_113932513300009520Peatlands SoilVPAAMKALGADCHITGDTIRAVLLEGNQDAALEALRREQLRIISLIPVRTSLEEYFVRKLQPSKAAAGVTR*
Ga0116220_1019916023300009525Peatlands SoilEIVWQGTLVPSSLRALGADCHVTGDAIRAVLPEGRQDAALEALGRERLRLISVIPVRTSLEDYFVAQLKPVEETAGATA*
Ga0116223_1011515133300009839Peatlands SoilVWQGSSVPASLKTLAANCHVTGDTVRAVVPEASQDPLIDALRRERLRIVSVTPIRTSLEEYFVQKLKPSEAAAGVRS*
Ga0126370_1261600523300010358Tropical Forest SoilLGADGHVSGDTVRAVILDKDQEAVIDALRRERLRLIAVTPVRTTLEDYFLQKLKPAEANAAKVMA*
Ga0126381_10002193283300010376Tropical Forest SoilKALNATCYATGDTVRAVLPETNQDAAIDAIRRERARLVSVTPVRASLEDYFVEKVKKIEAGMGAKA*
Ga0134124_1084778613300010397Terrestrial SoilTSVPSSLRALGAECHVTGDTVRAVLAEANQDTALEALRRERLRLISVTPVRNSLEDYFIQKLRPAEATVGAKAGAKL*
Ga0137776_186536413300010937SedimentRGTIVPAAMKELSAETHIAGDTVRAVLAQENQDAAIEVLRRERLRLISVIPVRTSLEDYFVAQLQPTNGEEALAK*
Ga0137392_1036309133300011269Vadose Zone SoilSNVHGKVEVVWQGTRVPSSIKALGADCHVTGDTVRAVLPEENQDAAIDALRREHLRLLSLIHVRASLEDYFVQTLAPREKVEGVTV*
Ga0137391_1067825913300011270Vadose Zone SoilKVEVVWQGTRVPSSIKALGADCHVTGDTVRAVLPEENQDAAIDALRREHLRLISLIPVRASLEDYFVQTLAPREKVEGVTV*
Ga0137389_1022855833300012096Vadose Zone SoilALGAECHVTGETVRAILSEANQDAAIEALRRERLRLVSVTPVRTSLEDYFMQKLQPTVATSGARA*
Ga0137389_1047820513300012096Vadose Zone SoilCHVTGDTVRATVSEANQDAAIEALRRERLRLISVTPVRTALEDYCMQKLQPTAATSGARA
Ga0137388_1002670063300012189Vadose Zone SoilGAECHVTGDTVRAVISEARQNSALEALRREGLRLISLTPVRMSLEDYFVQQLKPSEAAVEVTS*
Ga0137388_1018921013300012189Vadose Zone SoilGAECHVTGDTVRATVSEANQDIAIEALRRERLRLISVTPVRTSLEDYFMQKLQPSTATSGARA*
Ga0137364_1089409923300012198Vadose Zone SoilPRALQTMGAECHMTGDTVRALVPETHQDAALDALRCEQLRLISLTPVRSSLEDYFVEKLKTEQPLAEVRS*
Ga0137364_1115105423300012198Vadose Zone SoilVWQGTVAPASLRALGADCHVTGDTVRAVLPEDKQDVAIEILRRERLRLISVTPVRASLEDYFVQKLQPTEALAGTRS*
Ga0137363_1017180133300012202Vadose Zone SoilSASLKALNATCYTSGDTVRAVLPEANQDAAIDALRRERLELVSVIPVRASLEDYFVEKVKHSEAVVGARS*
Ga0137362_1016717113300012205Vadose Zone SoilQGTAVPASIQGRGAECHVTGDTVRTVLPEDKQDAAIEVLRRERLRLISVTPVRASLEDYFVQKLQPTEALAGARP*
Ga0137362_1121081813300012205Vadose Zone SoilTVRAILSEANQDAAIEALRRERLRLVSVTPVRTSLEDYFMQKLQPTVATSGARA*
Ga0137381_1091887723300012207Vadose Zone SoilGTAVPASLPALGAECHVTGDTVRAVLSEANQDTAIEALRRERLRLISVTPVRTSLEDYFIQKLEPSEAVAGVRS*
Ga0137378_1083344313300012210Vadose Zone SoilQGTVVPPSIRALGAECHVTGDTARAVLAEDHQDAAIETLRREHLRLISVIPVRASLEDYFVQKLKPEEKMAGVTA*
Ga0137370_1104753923300012285Vadose Zone SoilLTSSVHGKVELVWQGTKVPQSLRTLDAECHVTGDTVRAVIPETRQDAAMEALRREGLRLISLTPVRMSLEDYFVQQLKPSEAAMQVTS*
Ga0137370_1104886913300012285Vadose Zone SoilPASLRALGADCHVTGDTVRAVLPEDKQDTAIEVLRRERLRLISVTPVRASLEDYFVQKLQPTEALAGARP*
Ga0137386_1063218213300012351Vadose Zone SoilVWQGTVVPPSIRALGAECHVTGDTARAVLAEDHQDAAIETLRREHLRLISVIPVRASLEDYFVQKLKPEEKMAGVTA*
Ga0137390_1013757513300012363Vadose Zone SoilAVPPALRALGAECHVTGETVRAILSEANQDAAIEALRRERLRLISVTPVRTSLEDYFMQKLQPTLATSGARA*
Ga0137396_1079426823300012918Vadose Zone SoilPAALRALGAECHVTGETVRAILSEANQDAAIEALRRERLRLISVTPVRTSLEDYFMQKLQLTLATSGARA*
Ga0137359_1158267323300012923Vadose Zone SoilADLTSSVHGNVELVWQGSAVPQSLRTLGAECHITGDTVRAIVSETRQDAAMEALRREGLRLISLTPVRMSLEDYFVQQLKPADAAVEVTS*
Ga0137419_1114442923300012925Vadose Zone SoilGKVEVVWQGTTVPASLRALGAECHVTRDTVRAMLSEANQDAAIEALRRERLRLVSVTPVRTSLEDYYLQKLQPANATVGVGAKA*
Ga0137416_1210957123300012927Vadose Zone SoilGTRVPSSLKALEAECHVTGDTVRAVLPEENQDAAIDALRREHLRLISLIPVRASLEDYFVQKLAPRERVEGVTV*
Ga0137410_1013125113300012944Vadose Zone SoilVEVVWQGTTVPASLRALGAECHVTRDTVRAMLSEANQDAAIEALRRERLRLVSVTPVRTSLEDYYLQKLQPANATVGVGAKA*
Ga0126375_1067991123300012948Tropical Forest SoilWQGTRIPASLRAMGAECHVSPDSVRAIVPEEKQEQTIDVLRHENLRLISMVPLRASLEDYYLQKLKPNGVAAGAER*
Ga0126375_1110465913300012948Tropical Forest SoilVTGDTVRAVLPESSQEAVLDALRRERLQLVSLMPVRTSLEDYFLQKLRPAQTMAGGTA*
Ga0164302_1180504023300012961SoilSSVHGKVELVWPGRAVPQSFNTLGAERHVTGDTVRATVSGERQEAATEALQREGLRLISLTPVRMSLEDYFVQQLKPSDTTVEVTL*
Ga0168315_12036623300012980Weathered Mine TailingsSRVEFVWQGTRVPASLSALGAECHVTGDTVRAIVPEERQDATIDALRREGLRLVSVIPVRTSLEDYFVEKLKPTEKMAGATV*
Ga0164306_1178871413300012988SoilECHITGNTVRAVLSEANQDTALEALRRERLRLISVTPVRTSLEDYFMQKLQPAGATVGGRA*
Ga0164305_1170145523300012989SoilHGRVELVWHGTAVPASLRALGAECHVTGDTVRAMLSEANQDAAIDALRRERQRLVSVTPVRTSLEDYYLQKLQPASATVGVGAGAKA*
Ga0120125_111488633300014056PermafrostECYVTGDTVRAIVSEDRQDAAMEALRREGLRLISLTPVRMSLEDYFVQQLKPAEASVGVSS*
Ga0134085_1002408013300015359Grasslands SoilASLRALGADCHVTGDTVRAVLPEDKQDTAIEVLRRERLRLISVTPVRASLEDYFVQKLQPTEALAGARP*
Ga0187801_1020232123300017933Freshwater SedimentWQGNTVPTALTALGAECHLTGDTVRAVVLEGSQDAAIDALRRERLRIISVTPVRTSLEEYFVRKLQPSQAVAGVRS
Ga0187801_1043966723300017933Freshwater SedimentLTSGVAGKVEIVWQGNSVPVPLKTLAMECHLTSDTVRAVIPEANQDAAIDALRREGLCIISVIPVRTSLEDYFVRKLKPSQAAAGVTS
Ga0187808_1025161523300017942Freshwater SedimentPASVKALTSEHHLTGDTVRAVVLEGNEDAVIDALRRERLRIISLTPVRTSLEEYFIRKLRPSEAAAGVRS
Ga0187776_1017743613300017966Tropical PeatlandVPASLKTLGAECHVSGDTVCGLVAEASQDAALEILRREHLRLISLTPVRSSLEDYYMQKLKPAEATAGARS
Ga0187777_1059255823300017974Tropical PeatlandERLDELDRWVGAVAELTSSVHGKVELIWQGTTVPPSLRALGAECRISGETVRGLVPEASQDAALEALRREHLHLISLTPVRLSLEDYYLQKLKPAEATAGARS
Ga0187804_1016026113300018006Freshwater SedimentIVWHGNFMPASVKALTSEHHLTGDTVRAVVLEGNEDAVIDALRRERLRIISLTPVRTSLEEYFIRKLRPSEAAAGVRS
Ga0187863_1042174813300018034PeatlandSVPAAMRALGADCRVVGPTVRAVLAEENQDAAIEALQRDRLRLVSVIPVRTSLEDYFVAQVKPAHASAGVTA
Ga0187766_1103574323300018058Tropical PeatlandIVWQGNSVPVPLKTLAMECHLTSDTVRAMLPEANQDAAIDALRREGLCIISVIPVRTSLEDYFVRKLKPSQAAAGVTS
Ga0187766_1116323023300018058Tropical PeatlandVWQGNHLPAAVKALSSECHLTGDTVRAVVLEGSEDVVIDALRRERLRIISLTPVRTSLEEYFIRKLKPSEAAAGVRS
Ga0187766_1137355923300018058Tropical PeatlandVADLTSSVQGKVELVWHGGSVPASLRDLGVECHATGETLRAVIPEDRQDAAIDALRREKLKLISVTPVRTSLEDYFVAELKKINDREAAGATA
Ga0187769_1003027513300018086Tropical PeatlandSVPASLKALTTEYHLTGDTVRALVREANQDAAIDALRREGLRIISIVPLRTSLEEYFMRKLKPSEAAAGVRS
Ga0187770_1003439913300018090Tropical PeatlandTLITEYHLTGDTVRALVREANQDAAIDALRREGLRIISIVPVRTSLEEYFMRKLKPSEAAAGVRS
Ga0066655_1036653313300018431Grasslands SoilHGRVEMVWQGTVVPPSIRALGVECHVTGDTVRAVLAEDHQDAAIETLRREHLRLISVIPVRASLEDYFVQKLKPEEKMAGVTA
Ga0066667_1039679623300018433Grasslands SoilWQGKSVPASLRALGAECHILGDTVRAVLSEANQEAAIDALRRERLRLISVTPVRTSLEDYFVQKLQDMEAIAG
Ga0066669_1078108123300018482Grasslands SoilPASLRALGAECHILGDTVRAVLSEANQEAAIDALRRERLRLISVTPVRTSLEDYFVQKLQDMEAIAG
Ga0193748_102408823300019865SoilLKTLGVECYVTGDTVRAIVSEDRQDAAMEALRREGLRLISLTPVRMSLEDYFVQQLKPAKASVGVSS
Ga0193715_108586513300019878SoilSLRALGAECHVTTDMVRAVLPEDKLDAVIEALRRANLRLISVTPVRATLEQYFVERLSPVEVLG
Ga0193729_125093013300019887SoilQGITVPSSLSSLGAECHVTRDMVRAVIPEEVQDTAIEALRRAQLRLISVTPVRMSLEDYFVAQIRPTEASAGVPA
Ga0193733_105681933300020022SoilCHVTGETVRAVISEARQDAAMEALGREGLRLISLTPVRMSLEDYFVQQLKPNEATVEVTS
Ga0210407_1081594613300020579SoilVRAIQREANQDAAIEALRRERVRLISVVPVRTSLEDYFMQKLKPAEAAAGVRR
Ga0210395_1132728323300020582SoilVHGQVELVWQGTAVPTALRALGAEYHVTGDTVRAVLPEANQDAAIEALRRDRLRLISVIPVRTSLEDYFLQKLQPAAASSGARA
Ga0210401_1051884833300020583SoilSLKALSASCSVTGDTVRAVVSEASQDALIDALRRERVHIVSVTPLRTSLEEYFVQKLKPSGAAAGVRA
Ga0210400_1030296333300021170SoilMHLGNLLRVGAVADLISSVQGRVEIVWQGNVVPSALRNLGTECHVTGDTVRAVLAESSQDAVIDVLRREKLRLISVLPVRTSLEDYFVAQVRPTEQFAGVTA
Ga0210408_1014979813300021178SoilRALGAECHVTGDTVRAVLSEANQDSAIEALRRERLRLISVIPVRTSLEDYFVQKLQPSEAVAGVRS
Ga0210408_1032283933300021178SoilHVTGDTVRAVLSEANQDSAIEALRRERLRLISVIPVRTSLEDYFVQKLQPAEAVAGVRS
Ga0210388_1009385043300021181SoilVWHGNALPANVKTLTADCRVTGDTVRAVVAEGSQDALIDALRRERVHIISVTPLRTSLEEYFVQKLKPAEAAAGVRS
Ga0210386_1079648313300021406SoilVWQGTTVPSSLRALGAECHVTGDTVRAVLSEANQDAAIEALRRERLRLISVIPVRTSLEDYFVQKLQPAEAVAGVKS
Ga0210394_1018456813300021420SoilAANCHVTGETVRAVVPETSQEVLIDALRRDRLRIVSVTPIRTSLEEYFVQKLKPSEAAAGVRS
Ga0210394_1148181923300021420SoilAWIKPLDADCHLAGDTVRAVLAERHQEAVIDGLRHDRMRIVSVTPVRTSLEEYYLRKLKPSEAVAGVRS
Ga0210394_1177197523300021420SoilGDTVRAVLPEANQDAAIEALRRDRLRLISVIPVRTSLEDYFLRKLQPVAASSGARA
Ga0210384_1075487523300021432SoilALGAECHVTGDTVRAILSEANQDAAIEALRRERLRLVSVTPVRTSLEDYFMQKLQQPAAAQSGARA
Ga0210384_1162755423300021432SoilWHGTVVPASLRALGAECHVTGDTVRAVLSEANQDAAIEALRRERLRLISVIPVRTSLEDYFMQKLRPAEATAGARS
Ga0182009_1020045513300021445SoilRVELIWRGTVVPAALQGLGAECHVTGDTARALIPESSQDAALDALRRERLHLVSVMPVRTSLEDYFVQKLRPAQTMAGSRA
Ga0210398_1155093113300021477SoilPASLKALGADCHVTGDTVRAVLLEGNQDAALEALRREQLRIVSLIPVRTSLEEYFVRKLQPSKAIAGVTQ
Ga0210402_1076923223300021478SoilTGDTVRAVLPEANQDAAIEALRRDRLRLISVIPVRTSLEDYFLQKLQPAAASSGARA
Ga0210409_1052183623300021559SoilTTVPSSLPALGAECHVTGDTVRAVLSEANQDAAIEALRRERLRLISVIPVRTSLEDYFVQKLQPAEAVAGVKS
Ga0207692_1075813613300025898Corn, Switchgrass And Miscanthus RhizosphereVHSKVELVWQGPAVPASLRALGAECHVTGDTVRAILSEANQDAAIEALRRERLRLVSVTPLRTSLEDYFMQKLQQPAAAQSGARA
Ga0207699_1132605323300025906Corn, Switchgrass And Miscanthus RhizosphereHIAGDTVRAILPEASQDAAIDALRRERLRLISVTPVRTSLEDYYLQKLQPAIASSGARA
Ga0207687_1023393533300025927Miscanthus RhizosphereWQGTVVPVSLRALGAECHVTRDTVRAMLSEANQDAAIEALRRERLRLVSVTPVRTSLEDYYLQKLQPPNATVRVGAKVGTTV
Ga0207665_1003104813300025939Corn, Switchgrass And Miscanthus RhizosphereRDTVRAMLSEANQDAAIEALRRERLRLVSVTPVRTSLEDYYLQKLQPANATVGVGAKA
Ga0207639_1054020523300026041Corn RhizosphereTGNTVRAVLSEANQDTALEALRRERLRLISVTPVRTSLEDYFMQKLQPAGATVGGRA
Ga0209863_1011607713300026281Prmafrost SoilVPASLRALGAECHVTGDTVRAMLSEANQDAAIEALRRERLRLVSVTPVRTSLEDYYLQKLQPANATIRVGAGAGATVGRRS
Ga0209265_123473513300026308SoilPASLRALGADCHVTGDTVRAVLPEDKQDTAIEVLRRERLRLISVTPVRASLEDYFVQKLQPTEALAGARP
Ga0209802_123649613300026328SoilCHVTGDTVRAVISEARQNSALEALRREGLRLISLTPVRMSLEDYFVQQLKPSEAAVEVTS
Ga0209803_112073323300026332SoilRVEMVWQGTVVPPSIRALGAECHVTGDTVRAVLAEENQDAAIETLRREHLRLISVIPVRASLEDYFVQKLKPEEKMAGVTA
Ga0209805_127475323300026542SoilSLKNLGECHVTGDTVRAVIAEENQEVAVEALRREKLRLVSLVPVRASLEDYFVQKLKQVDKMQGVIA
Ga0179587_1018168633300026557Vadose Zone SoilGAVVDLTSSVHGKVELVWQGSAVPASLRALGAECHVTGDTVRAIISEANQDAAIDVLRKDLLRLVSVTPVRNSLEDYFMQRLQNTVATSEAVSGARA
Ga0209523_110815723300027548Forest SoilCHVTGDTVRAVLPEDKQDAAIEVLRRERLRLISVTPVRASLEDYFVQRLQPTEALAGAQP
Ga0208324_106465313300027604Peatlands SoilPTALTALGAECHLTGDTVRAVVCEGNQDAAIDALRRERLRIISVTPVRTSLEEYFVRKLQPSQAVAGVRS
Ga0209060_1032705913300027826Surface SoilRVEIVWQGGVAAALLNALALECHVTGDTVRAVVLEASQDRALEVLRREQLRLISVTPVRTSLEDYYVRQVRPAQTAAGVRG
Ga0209180_1037341913300027846Vadose Zone SoilAVPAALRALGAECHVTGETVRAILSEANQDAAIEALRRERLRLISVTPVRTSLEDYFMQKLQPTLATSGARA
Ga0209701_1033963423300027862Vadose Zone SoilWQTTRVPASIKALAAECHVTGDTVRAVLPEENQDAAIDALRREHLQLISLIPVRASLEDYFVQKLKSAEKMEGVTV
(restricted) Ga0255311_113313813300031150Sandy SoilRALGAECHVTGDTVRAVLSEANQDAAIEALRRERLRLISVTPVRTSLEDYFLQKLQPAEARAGARA
Ga0310686_11889215513300031708SoilVRAVLSEANQDTAIEALRRERLRLISVIPVRTSLEDYFVQKLQPTEAVAGVRS
Ga0307469_1016668313300031720Hardwood Forest SoilHISGDTVRAVLPEANQEAALDALRRERLRLISVAPVRTSLEDYFVQKVRPSEAMAGTKS
Ga0307473_1034149723300031820Hardwood Forest SoilGTVAPASLRALGADCHVTGDTVRAVLPEDKQDVAIEILRRERLRLISVTPVRASLEDYFVQKLQPTEALAGTRS
Ga0307473_1108042923300031820Hardwood Forest SoilECHVTGDTVRAIVSETRQDAAMEALRREGLRLISLTPVRMSLEDYFVQQLKPAEAAVEVT
Ga0311367_1117071513300031918FenTLGAECHVTGDNVRAILAEEHQDRAIEMLRQEKLRLVSVVPVRTSLEDYYLQKLKPNGAAAGAKG
Ga0307479_1122843023300031962Hardwood Forest SoilTVPSSLRALGAECHVTGDTVRAVISEANQDSAIEALRRERLRLISVIPVRTSLEDYFVQKLQPSEAVAGVVS
Ga0311301_1136700023300032160Peatlands SoilLKALGADCHVTGDAIRAVLPEGRQDAALEALGRERLRLISVIPVRTSLEDYFVAQLKPVEETAGATA
Ga0307471_10058745713300032180Hardwood Forest SoilLGADCHISGDTVRAVLPEANQEAALDALRRERLRLISVAPVRTSLEDYFVQKTRPSEAMAGAKS
Ga0307472_10000936363300032205Hardwood Forest SoilGKVELVWQGSRVPQSLRTLDAECHVTGDTVRAVIPEARQDVALEALRREGLRLISLTPVRMSLEDYFVQQLKPSEAAVGMTS
Ga0307472_10009124433300032205Hardwood Forest SoilVVWQGTVVPASLRALGAECHVTRDTVRAMLSEANQDAAIEALRRERLRLVSVTPVRTSLEDYYLQKLQPPNATVRVGAKVGTTV
Ga0307472_10149389013300032205Hardwood Forest SoilLGAECHITGDTVRALLSEANQDTAIEALRRERLRLISVIPVRTSLEDYFVQKLQPAEAVAGVRS
Ga0307472_10267155013300032205Hardwood Forest SoilGDTVRAVLPEANQDAAIDAIRRERSRLVSVTPVRASLEDYFVEKVKRIEAGLGAKA
Ga0335082_1024320713300032782SoilEVVWLGNSVAASLKTLAPQCHVTGDTVRAVVPEASQDALVDALRRERLHIVSVTPLRTSLEEYYVQKLKPSEAAAGVRS
Ga0335079_1237691323300032783SoilMPASLRALGAECRVTGDTVRAVVPEAGQEAALEALRREHLHLISLTPVRLSLEDYYMQKLKPAEATAGARS
Ga0335078_1160278423300032805SoilQNSFVPATLKSLMTECHVTGDTVRAVVPEANQDAVIDGLRREGIRIISVTPVRTSLEEYFVRKLAPSKAAAGVQL
Ga0335078_1193446323300032805SoilVEMVWEGTLVPAWFKSRGAACHVSGDTVRAVVQEQDQEAAIDALRRERLRLVSVVPVRMSLEDYFVEKLKPAEAKAGVRS
Ga0335080_1038438713300032828SoilRSLTAEIHLMGDTVRALVREGNQDAAIDALRRDGLRIISVTPVRTSLEDYFMRKLKPTEVAGMRS
Ga0335070_1030641813300032829SoilKVEVVWQGTAVPASLRALGAECHVTRDTVRAMLSEANQDAAIEALRRERLRLVSVTPVRTSLEDYYLQKLQPANPTVGVGAKVGTTV
Ga0335081_1171048313300032892SoilLTSEYHLTGDTARALVREANQDAAIDALRREGLRIISVTPVRTSLEEYFMRKLKPAEAAAGVRS
Ga0335081_1210118723300032892SoilVPAALKSLMTECHVTGDTVRAVVPEANQDAVIDGLRREGIRIISVTPVRTSLEEYFVRKLAPSKAAAGVQL
Ga0335081_1217767423300032892SoilCHGTRDMMRAVVAEDNLDRTIEALRREGLRLISVTPVRTTLEDYFVQKLSPAEVTA
Ga0335077_1049458933300033158SoilAAECHVTSDTVRAIVPEERQDATIDAVRREGLRLISVVPVRTSLEDYFVEKLKPEKMAGATV
Ga0310914_1018770433300033289SoilSVKALMSEYHLSGDSVRAIVREANQDAAIDGLRQAGIRIISITPVRTSLEEYFVRKLKPSETAAGVRS

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.