Metagenome Family F042847

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F042847
Family Type	Metagenome
Number of Sequences	157
Average Sequence Length	78 residues
Representative Sequence	MARIALELDGEDARVLRGALLAARATELAELHRRGFRHSYGKASDSARESMSAEVEHHRRRIELLDRLIEALPGTD
Number of Associated Samples	111
Number of Associated Scaffolds	157

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	54.78 %
% of genes near scaffold ends (potentially truncated)	25.48 %
% of genes from short scaffolds (< 2000 bps)	85.35 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (80.892 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (15.287 % of family members)
Environment Ontology (ENVO)	Unclassified (33.758 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (58.599 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.81% β-sheet: 0.00% Coil/Unstructured: 45.19%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.7.7.1: BAG domain	d3ldqb1	3ldq	0.86513
a.47.1.1: STAT	d1uura1	1uur	0.83564
a.2.5.1: Prefoldin	d1fxka_	1fxk	0.82045
a.2.14.1: DnaK suppressor protein DksA, alpha-hairpin domain	d1tjla1	1tjl	0.81348
a.25.1.0: automated matches	d3iq1a_	3iq1	0.81296

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 157 Family Scaffolds
PF01810	LysE	26.75
PF03461	TRCF	19.75
PF00202	Aminotran_3	5.10
PF00486	Trans_reg_C	4.46
PF07690	MFS_1	2.55
PF12680	SnoaL_2	1.91
PF02518	HATPase_c	1.91
PF00005	ABC_tran	1.27
PF07676	PD40	1.27
PF12681	Glyoxalase_2	1.27
PF00082	Peptidase_S8	0.64
PF00156	Pribosyltran	0.64

COG ID	Name	Functional Category	% Frequency in 157 Family Scaffolds
COG1197	Transcription-repair coupling factor (superfamily II helicase)	Transcription [K]	39.49

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.89 %
Unclassified	root	N/A	19.11 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.89 %
Unclassified	root	N/A	19.11 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.89 %
Unclassified	root	N/A	19.11 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	59.87 %
Unclassified	root	N/A	19.11 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	29.94 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	29.30 %
Unclassified	root	N/A	19.11 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.11 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9.55 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	2.55 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.11 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.18 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.27 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.64 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.64 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.11 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.18 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.27 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	0.64 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.64 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.11 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.18 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.27 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.64 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.64 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.11 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.18 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.27 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.64 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.64 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.11 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.18 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.27 %
Streptomyces sp. CNT372	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. CNT372	0.64 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.64 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.64 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2001200001\|2001282654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1322	Open in IMG/M
2124908045\|KansclcFeb2_ConsensusfromContig571456	Not Available	571	Open in IMG/M
3300003267\|soilL1_10002244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1238	Open in IMG/M
3300003316\|rootH1_10014409	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300003319\|soilL2_10155954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2663	Open in IMG/M
3300003320\|rootH2_10279570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1146	Open in IMG/M
3300003465\|P52013CM_1025184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1821	Open in IMG/M
3300004114\|Ga0062593_100405708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1221	Open in IMG/M
3300004114\|Ga0062593_100789589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	942	Open in IMG/M
3300004114\|Ga0062593_101889780	Not Available	659	Open in IMG/M
3300004114\|Ga0062593_102218555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	615	Open in IMG/M
3300004114\|Ga0062593_102402384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	595	Open in IMG/M
3300004114\|Ga0062593_102581388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300004156\|Ga0062589_100129169	All Organisms → cellular organisms → Bacteria	1685	Open in IMG/M
3300004157\|Ga0062590_100284140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1274	Open in IMG/M
3300004157\|Ga0062590_102751612	Not Available	525	Open in IMG/M
3300004463\|Ga0063356_100106215	All Organisms → cellular organisms → Bacteria	3065	Open in IMG/M
3300004463\|Ga0063356_100142895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2709	Open in IMG/M
3300004463\|Ga0063356_101201971	Not Available	1101	Open in IMG/M
3300004463\|Ga0063356_103634461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	664	Open in IMG/M
3300004463\|Ga0063356_104318535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	611	Open in IMG/M
3300004479\|Ga0062595_100260246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1134	Open in IMG/M
3300004479\|Ga0062595_100749026	Not Available	794	Open in IMG/M
3300004480\|Ga0062592_100134297	All Organisms → cellular organisms → Bacteria	1620	Open in IMG/M
3300004480\|Ga0062592_100552447	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300004480\|Ga0062592_100793059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	838	Open in IMG/M
3300004480\|Ga0062592_101229825	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300004480\|Ga0062592_101684176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	616	Open in IMG/M
3300004480\|Ga0062592_101709420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	612	Open in IMG/M
3300005093\|Ga0062594_101020250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	798	Open in IMG/M
3300005093\|Ga0062594_101260664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	738	Open in IMG/M
3300005093\|Ga0062594_101953494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	625	Open in IMG/M
3300005093\|Ga0062594_102952777	Not Available	530	Open in IMG/M
3300005329\|Ga0070683_100641267	Not Available	1017	Open in IMG/M
3300005330\|Ga0070690_100276272	All Organisms → cellular organisms → Bacteria	1197	Open in IMG/M
3300005334\|Ga0068869_101115760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	691	Open in IMG/M
3300005336\|Ga0070680_100326032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1304	Open in IMG/M
3300005339\|Ga0070660_100292626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1334	Open in IMG/M
3300005343\|Ga0070687_100027939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2730	Open in IMG/M
3300005353\|Ga0070669_101743814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	543	Open in IMG/M
3300005406\|Ga0070703_10536377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	532	Open in IMG/M
3300005441\|Ga0070700_101199074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	634	Open in IMG/M
3300005441\|Ga0070700_101870965	Not Available	518	Open in IMG/M
3300005444\|Ga0070694_100785563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	780	Open in IMG/M
3300005444\|Ga0070694_101470404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300005456\|Ga0070678_102396300	Not Available	501	Open in IMG/M
3300005457\|Ga0070662_101267783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	634	Open in IMG/M
3300005458\|Ga0070681_11012002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	751	Open in IMG/M
3300005459\|Ga0068867_101085272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	730	Open in IMG/M
3300005467\|Ga0070706_100088411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2873	Open in IMG/M
3300005467\|Ga0070706_100512594	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300005467\|Ga0070706_101949028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	533	Open in IMG/M
3300005468\|Ga0070707_100006944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10497	Open in IMG/M
3300005468\|Ga0070707_101416263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. CNT372	662	Open in IMG/M
3300005471\|Ga0070698_100015266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8121	Open in IMG/M
3300005471\|Ga0070698_100141201	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2359	Open in IMG/M
3300005518\|Ga0070699_100051315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3571	Open in IMG/M
3300005536\|Ga0070697_101411734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	622	Open in IMG/M
3300005544\|Ga0070686_100059394	All Organisms → cellular organisms → Bacteria	2463	Open in IMG/M
3300005545\|Ga0070695_100226376	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1350	Open in IMG/M
3300005545\|Ga0070695_100428228	Not Available	1009	Open in IMG/M
3300005546\|Ga0070696_100057545	All Organisms → cellular organisms → Bacteria	2714	Open in IMG/M
3300005546\|Ga0070696_101625041	Not Available	556	Open in IMG/M
3300005547\|Ga0070693_101190801	Not Available	585	Open in IMG/M
3300005719\|Ga0068861_102045483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	572	Open in IMG/M
3300006755\|Ga0079222_10520815	Not Available	879	Open in IMG/M
3300006852\|Ga0075433_10179330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1885	Open in IMG/M
3300006852\|Ga0075433_10847943	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300006854\|Ga0075425_100519694	All Organisms → cellular organisms → Bacteria	1371	Open in IMG/M
3300006854\|Ga0075425_101211193	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300006854\|Ga0075425_102505639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	571	Open in IMG/M
3300006871\|Ga0075434_100491835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1247	Open in IMG/M
3300006903\|Ga0075426_10737270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	740	Open in IMG/M
3300006904\|Ga0075424_100398935	All Organisms → cellular organisms → Bacteria	1467	Open in IMG/M
3300006918\|Ga0079216_11637343	Not Available	546	Open in IMG/M
3300006954\|Ga0079219_10793013	Not Available	742	Open in IMG/M
3300007076\|Ga0075435_100023303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	4785	Open in IMG/M
3300007076\|Ga0075435_100623585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	935	Open in IMG/M
3300009093\|Ga0105240_12093993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	587	Open in IMG/M
3300009098\|Ga0105245_10315846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1538	Open in IMG/M
3300009147\|Ga0114129_10586122	All Organisms → cellular organisms → Bacteria	1446	Open in IMG/M
3300009147\|Ga0114129_11538785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	816	Open in IMG/M
3300009156\|Ga0111538_10749695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1237	Open in IMG/M
3300009162\|Ga0075423_10747524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1034	Open in IMG/M
3300009162\|Ga0075423_10905052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	935	Open in IMG/M
3300009162\|Ga0075423_11623715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	695	Open in IMG/M
3300009176\|Ga0105242_10295643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1476	Open in IMG/M
3300009177\|Ga0105248_12490962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	590	Open in IMG/M
3300009553\|Ga0105249_10651480	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300010040\|Ga0126308_11066005	All Organisms → cellular organisms → Bacteria → Proteobacteria	568	Open in IMG/M
3300010040\|Ga0126308_11183106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	541	Open in IMG/M
3300010041\|Ga0126312_10386488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	994	Open in IMG/M
3300010041\|Ga0126312_10700592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	731	Open in IMG/M
3300010044\|Ga0126310_10028087	All Organisms → cellular organisms → Bacteria	2919	Open in IMG/M
3300010045\|Ga0126311_10277231	All Organisms → cellular organisms → Bacteria	1254	Open in IMG/M
3300010045\|Ga0126311_11734829	Not Available	528	Open in IMG/M
3300010362\|Ga0126377_10067189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3178	Open in IMG/M
3300010371\|Ga0134125_10979299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	928	Open in IMG/M
3300010373\|Ga0134128_11825644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	669	Open in IMG/M
3300010397\|Ga0134124_10159164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2021	Open in IMG/M
3300010399\|Ga0134127_10337192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1467	Open in IMG/M
3300010399\|Ga0134127_10700461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1053	Open in IMG/M
3300010399\|Ga0134127_13465564	Not Available	517	Open in IMG/M
3300012362\|Ga0137361_10839144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	835	Open in IMG/M
3300012668\|Ga0157216_10499620	Not Available	524	Open in IMG/M
3300012685\|Ga0137397_10929793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	644	Open in IMG/M
3300012955\|Ga0164298_11545206	Not Available	520	Open in IMG/M
3300013297\|Ga0157378_10402726	All Organisms → cellular organisms → Bacteria	1349	Open in IMG/M
3300015371\|Ga0132258_12483283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1297	Open in IMG/M
3300015371\|Ga0132258_13549457	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300015372\|Ga0132256_100439016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1411	Open in IMG/M
3300015373\|Ga0132257_100977597	Not Available	1064	Open in IMG/M
3300015374\|Ga0132255_100247468	All Organisms → cellular organisms → Bacteria	2546	Open in IMG/M
3300018432\|Ga0190275_10128824	All Organisms → cellular organisms → Bacteria	2296	Open in IMG/M
3300018469\|Ga0190270_11133428	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300018469\|Ga0190270_12487699	Not Available	580	Open in IMG/M
3300019377\|Ga0190264_10982193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	672	Open in IMG/M
3300025885\|Ga0207653_10269003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	656	Open in IMG/M
3300025910\|Ga0207684_10068890	All Organisms → cellular organisms → Bacteria	3007	Open in IMG/M
3300025910\|Ga0207684_10600290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	940	Open in IMG/M
3300025917\|Ga0207660_10387407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1124	Open in IMG/M
3300025917\|Ga0207660_11621123	Not Available	521	Open in IMG/M
3300025918\|Ga0207662_10039295	All Organisms → cellular organisms → Bacteria	2775	Open in IMG/M
3300025919\|Ga0207657_10380062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1112	Open in IMG/M
3300025922\|Ga0207646_10397041	All Organisms → cellular organisms → Bacteria	1246	Open in IMG/M
3300025927\|Ga0207687_10044122	All Organisms → cellular organisms → Bacteria	3075	Open in IMG/M
3300025932\|Ga0207690_10417485	Not Available	1073	Open in IMG/M
3300025933\|Ga0207706_11168920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	640	Open in IMG/M
3300025934\|Ga0207686_10094549	All Organisms → cellular organisms → Bacteria	1982	Open in IMG/M
3300025938\|Ga0207704_11570160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	565	Open in IMG/M
3300025941\|Ga0207711_11642745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	586	Open in IMG/M
3300025947\|Ga0210067_1061379	Not Available	545	Open in IMG/M
3300025981\|Ga0207640_11139024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	691	Open in IMG/M
3300026075\|Ga0207708_11715517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	551	Open in IMG/M
3300026088\|Ga0207641_10516362	Not Available	1162	Open in IMG/M
3300026095\|Ga0207676_10459780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1202	Open in IMG/M
3300026116\|Ga0207674_10077663	All Organisms → cellular organisms → Bacteria	3326	Open in IMG/M
3300026118\|Ga0207675_100976167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	865	Open in IMG/M
3300026121\|Ga0207683_12194083	Not Available	500	Open in IMG/M
3300026535\|Ga0256867_10073555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1347	Open in IMG/M
3300028381\|Ga0268264_10995802	Not Available	845	Open in IMG/M
3300028722\|Ga0307319_10317415	Not Available	516	Open in IMG/M
3300028799\|Ga0307284_10401804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	558	Open in IMG/M
3300028824\|Ga0307310_10624766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	550	Open in IMG/M
3300028885\|Ga0307304_10198306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	858	Open in IMG/M
3300030336\|Ga0247826_10458429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	955	Open in IMG/M
3300031228\|Ga0299914_11035754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	668	Open in IMG/M
3300031229\|Ga0299913_10153784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2270	Open in IMG/M
3300031229\|Ga0299913_11073939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	769	Open in IMG/M
3300031548\|Ga0307408_100606041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	974	Open in IMG/M
3300031716\|Ga0310813_11813568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	573	Open in IMG/M
3300031716\|Ga0310813_12079920	Not Available	536	Open in IMG/M
3300031731\|Ga0307405_11153409	Not Available	668	Open in IMG/M
3300031740\|Ga0307468_100116846	All Organisms → cellular organisms → Bacteria	1631	Open in IMG/M
3300032002\|Ga0307416_101463173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	789	Open in IMG/M
3300032002\|Ga0307416_103550483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	522	Open in IMG/M
3300033412\|Ga0310810_10079064	All Organisms → cellular organisms → Bacteria	3963	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	62.42%
Host-Associated	Host-Associated	37.58%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.78%
Plants	Host-Associated → Plants	37.58%
Aquatic	Environmental → Aquatic	0.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.38%
Rhizome	Host-Associated → Plants → Rhizome	1.27%
Marine	Environmental → Aquatic → Marine	0.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.76%
Loam	Environmental → Terrestrial → Soil → Loam	21.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.47%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.55%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.27%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	1.27%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.64%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	21.02%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.47%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	17.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.55%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.27%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	1.27%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.64%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.64%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.64%
Mine Drainage	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage	0.64%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	15.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	14.01%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.28%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.46%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.82%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.18%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.18%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.18%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.18%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.55%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.91%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.27%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.27%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.27%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	1.27%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.64%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.64%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.64%
Ore Pile And Mine Drainage Contaminated Soil	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage → Ore Pile And Mine Drainage Contaminated Soil	0.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.64%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.64%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2001200001	Soil microbial communities from Waseca County, Minnesota, USA - Sample 10150	Environmental	Open in IMG/M
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003316	Sugarcane root Sample L1	Host-Associated	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003320	Sugarcane root Sample H2	Host-Associated	Open in IMG/M
3300003465	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P5 sample	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012668	Arctic soils microbial communities. Combined Assembly of 23 SPs	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025947	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2001330507	2001200001	Soil	MRLDLDLDGEEDVRLLRGALLAAKATELAELQRWDSRLSFGYGTDSAREGMSAEVEQRRRRIELLDRLIESLAAAPGSPGG
KansclcFeb2_06503510	2124908045	Soil	MSDGEADSRSVRIDLPIEDEDIPILRGALLAARATELAEMHRRGFRHSYGKGSDSARETMSAEVSHHRRRIELLDRLIEALPRGTGST
soilL1_100022442	3300003267	Sugarcane Root And Bulk Soil	MARLELHLEDGDARLLRGALLAARATELAELHRRGFRHSAGYGSDSAREVMTAEVEHHRRRIQLLDRLIEALSGLPGGQ*
rootH1_100144092	3300003316	Sugarcane Root And Bulk Soil	MSVRLDLPIEDEDVPVLRGALLAARATELAEMNRRGFRHSAGYGSDSARETMTAEVAQHRRRIELLDRLIEALPRDGEG*
soilL2_101559543	3300003319	Sugarcane Root And Bulk Soil	MARLELHLEDGDARLLRGALLAARATELAELHRRGFRHSAGYGSDSAREVMTAEVEHHRRRIELLDRLIEALSGLPGGQ*
rootH2_102795701	3300003320	Sugarcane Root And Bulk Soil	PLRADLMARLELHLEDGDARLLRGALLAARATELAELHRRGFRHSAGYGSDSAREVMTAEVEHHRRRIQLLDRLIEALSGLPGGQ*
P52013CM_10251843	3300003465	Ore Pile And Mine Drainage Contaminated Soil	AIDLELDPEERRVLRGALLAARATELAEAQRRGFRASYEKQSESARAGMSAEVDHHLRRIELLDRLIAALELPEAGPA*
Ga0062593_1004057082	3300004114	Soil	MSRLELDLADDDARMLLGALLAARATELAEAQRRGFRHAYGKSSDSALEAMSAEVAHHLRRIELLDRLVEALENG*
Ga0062593_1007895892	3300004114	Soil	MARIALELDAEDARVLRGALLAARATELAELHRRGFRHSYGKSSDSARESMSAEIEHHRRRIELLDRLIEALRAP*
Ga0062593_1018897802	3300004114	Soil	MNLRLDLSLDAEDVSILRGALLAARATELAEANRRGFRHSAGYGSDSARETMTAEVAHHRRRIELLDQLIAALPADAGG*
Ga0062593_1022185552	3300004114	Soil	MPRGESRSRTIRVDLEVEDDEVAILRGALLAARATELAEANRRGFRHSYGKGSDSARDTMSAEVEHHQRRIELLDRLIEALPRVGDAT*
Ga0062593_1024023842	3300004114	Soil	MPRLELDLAAEEARVLRGALLAARATELAELHRRGFRHSAGYGSDSAREVMTAEVEQHRRRIELLDRLIEALHTAG*
Ga0062593_1025813881	3300004114	Soil	MPRLDIDLEREEVGILRGALLAARATELGELHRRGFRHSYGKGSDSAREVMTAEVEQHRRRIELLDRLIDVLAATSGND*
Ga0062589_1001291692	3300004156	Soil	MSRLELDLADDDARVLRGALLAARATELAEAQRRGFRHAYGKSSDSALEAMSAEVAHHLRRIELLDRLVEALENG*
Ga0062590_1002841403	3300004157	Soil	MPRGESRSRTIRVDLEVEDDEVAILRGALLAARATELAEANRRGFRHSYGKGSDSARETMSAEVEHHQRRIELLDRLIEALPRVGDAT*
Ga0062590_1027516122	3300004157	Soil	MRRLDIELKEDDVAVLRGALLAARATELAELHRRGFRHSYGKASDSARESMSAEIEHHRRRIELLDRLIEALRAP*
Ga0063356_1001062152	3300004463	Arabidopsis Thaliana Rhizosphere	MSRLELDLAEDDARVLRGALLAARATELAEAQRRGFRHSYGKASDSARESMSAEVTHHRRRIELLDRLIEALGPFG*
Ga0063356_1001428952	3300004463	Arabidopsis Thaliana Rhizosphere	MARLRLDLDLDPDDVRVLRGALLAARATELAELHRRGFRHFAGYGSDSARTGLTDEVEHHRRRLELLDRLIKALPAGPATGA*
Ga0063356_1012019712	3300004463	Arabidopsis Thaliana Rhizosphere	MHLDLDLDADDVRILRGALLAARATELAEIQRRDLRQFAGYGSDSARTAMSSEVEHHRRRIELIDRLLEALPPSG*
Ga0063356_1036344612	3300004463	Arabidopsis Thaliana Rhizosphere	MARLELDLDADDVRILRGALLAARATELAELHRRGFRHFAGYGTDSARTGLTEEVEHHRRRLELLDRLIAALGRPDPG*
Ga0063356_1043185351	3300004463	Arabidopsis Thaliana Rhizosphere	MAIDLELDADERRVLRGALLAARATELAEAQRRGFRHSYGKASDSARESMGAEVAHHLRRIELLDRLI
Ga0062595_1002602462	3300004479	Soil	MARLQLDLEAEELRTLRGALLAARATELAELHRRGFRHSAGYGSDSAREVMTAEVEQHRHRIELLDRLIEAMQPAD*
Ga0062595_1007490262	3300004479	Soil	VRIDIDLALEEVPLLRGALLAARATELGEAQRRGFRHSYGKASESAQASMSAEVAHHLRRIELLDRLIAALDRPAT*
Ga0062592_1001342971	3300004480	Soil	MRRLDIELKEDDVAVLRGALLAARATELAELHRRGFRHSYGKSSDSARESMSAEIEHHRRRIELLDRLIEALRAP*
Ga0062592_1005524472	3300004480	Soil	MPGGESRSRTIRVDLEVEDDEVAILRGALLAARATELAEANRRGFRHSYGKGSDSARETMSAEVEHHQRRIELLDRLIEALPRVGDAT*
Ga0062592_1007930591	3300004480	Soil	PNGTRQPVRADGAARLRRPDLMPRLDIDLEREEVGILRGALLAARATELGELHRRGFRHSYGKGSDSAREVMTAEVEQHRRRIELLDRLIDVLAATSGND*
Ga0062592_1012298252	3300004480	Soil	MARIELELSADEARTLRGALLAARATELAEAQRRGFRHSAGYGSDSARETMTAEVAHHRDRIELIDRLIATLPDMPAGEEEA*
Ga0062592_1016841762	3300004480	Soil	MPIDLDLDPDDRRVLRGALLAAKATELGEAQRRGFRHSYGKASDSARESMSAEVAHHLRRIELLDRLIAALADPTGSAEA*
Ga0062592_1017094201	3300004480	Soil	MARIALELDGEDARVLRGALLAARATELAELHRRGFRHSYGKASDSARDSMSAEVRHHRRRIELLDRLIEALPVTE*
Ga0062594_1010202502	3300005093	Soil	MARIALELDAEDARVLRGALLAARATELAELHRRGFRHSYGKASDSARDSMSAEVRHHRRRIELLDRLIEALPVTE*
Ga0062594_1012606642	3300005093	Soil	MPRLELDLDHGDAGVLRGALLAARATELAELHRRGFRHSYGKSSDSARESMSAEIEHHRRRIELLDRLIETLPTAD*
Ga0062594_1019534942	3300005093	Soil	MARIALELDGEDARVLRGALLAARATELAELHRRGFRHSYGKASDSARDSMSAEVAHHQRRIELLDRLIEALPTAD*
Ga0062594_1029527771	3300005093	Soil	MPRLELDLDVADADALRGALLAARATELAEAHRRGFRHSAGYGSDSAREVMTAEVEHHRRRVELLDRLIEALPTTD*
Ga0070683_1006412673	3300005329	Corn Rhizosphere	MPIALDLEPEDRRVLRGALLAARATELAEAQRRGFRASYGKQSDSANASMTVEVEHHLRRIELLDRLIAALGDATAAQPEA*
Ga0070690_1002762722	3300005330	Switchgrass Rhizosphere	MPRLELELDDAEARELRGALLAARATELAELHRRGSRHAYGKSSDSARESMSAEVEHHRRRIELLDRLIEALQKAT*
Ga0068869_1011157602	3300005334	Miscanthus Rhizosphere	MARIALELDGEDARVLRGALLAARATELAELHRRGFRHSYGKASDSARDSMSAEVAHHHRRIELLDRLIEALPTAD*
Ga0070680_1003260322	3300005336	Corn Rhizosphere	MPRLELELDDAEARELRGALLAARATELAELHRRGFRHAYGKSSDSARESMSAEIEHHRRRIELLDRLIEALQKAT*
Ga0070660_1002926262	3300005339	Corn Rhizosphere	MPRLELELDDAEARELRGALLAARATELAELHRRGFRHAYGKSSDSARESMSAEVEHHRRRIELLDRLIEALQKAT*
Ga0070687_1000279392	3300005343	Switchgrass Rhizosphere	MPRLDLELDDDDAGVLRGALLAARATELAELHRRGFRHSYGKASDSARESMSAEIEQHRRRIEVLDRLIEALQKAT*
Ga0070669_1017438142	3300005353	Switchgrass Rhizosphere	MPRLELELDDAEARELRGALLAARATELAELHRRGFRHAYGKSSDSARESMSAEIEHHRRRIELLDRLIEALQ*
Ga0070703_105363771	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	DLMARIALELDGEDARVLRGALLAARATELAELHRRGFRHSYGKASDSARDSMSAEVAHHQRRIELLDRLIEALPTAD*
Ga0070700_1011990741	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MARIALELDAEDARVLRGALLAARATELAELHRRGFRHSYGKASDSARDSMSAEVRHHRRRIELLDRLIEALPVAE*
Ga0070700_1018709651	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	AATAHRAIEPVWTRDPARLRRPDLMPRLELDLDVADADALRGALLAARATELAEAHRRGFRHSAGYGSDSAREVMTAEVEHHRRRVELLDRLIEALPTTD*
Ga0070694_1007855632	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MPRLELDLSAEEARVLRGALLAARAAELAELHRRGFRHSYGKGSDSARDVMTAEVEQHRRRIELLDRLIEALATAR*
Ga0070694_1014704041	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	AARLRRPDLMPRLDIDLEREEVGILRGALLAARATELGELHRRGFRHSYGKGSDSAREVMTAEVEQHRRRIELLDRLIDVLAATSGND*
Ga0070678_1023963002	3300005456	Miscanthus Rhizosphere	MARIALELDAEDARVLRGALLAARATELDELHRRGFRHSYGKASDSARDSMSAEVRHHRRRIELLDRLIEALPVTE*
Ga0070662_1012677832	3300005457	Corn Rhizosphere	DGEDARVLRGALLAARATELAELHRRGFRHSYGKASDSARESMSAEVEHHRRRIDLLDRLIEALPTAD*
Ga0070681_110120022	3300005458	Corn Rhizosphere	MTRIALELDGEDARVLRGALLAARATELAELHRRGFRHSYGKASDSARDSMSAEVAHHQRRIELLDRLIEALPTAD*
Ga0068867_1010852722	3300005459	Miscanthus Rhizosphere	MARIALELDGEDARVLRGALLAARATELAELHRRGFRHSYGKASESARESMSAEVAHHQRRIELLDRLIEALPTPD*
Ga0070706_1000884114	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MARLELEIPDDDVRALRGALIAARATELAELHRRGFRHSAQYGSDSARAVMTAEVEQHRRRIDLLDRLIEALPTPD*
Ga0070706_1005125942	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPRLELELDLDHGDAGVLRGALLAARATELAELHRRGFRHSYGKSSDSARESMSAEIEHHRRRIELLDRLIETLPTAD*
Ga0070706_1019490281	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPRLQLDLDTEEARTLRGALLAARATELAELHRRGFRHSAGYGSDSARQVMTTEVEQHRRRIELLDRLIETLPTAD*
Ga0070707_1000069444	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MPRLQLDLDTEEARTLRGALLAARATELAELHRRGFRHSAGYGSDSARQVMTAEIEHHRRRIELLDRLIETLPTAD*
Ga0070707_1014162631	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MPRLELDLSAEEARVLRGALLAARAAELAELHRRGFRNSYGKGSDSAREVMTAEVEQHRRRIELLDRLIEALATAR*
Ga0070698_1000152662	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPRLELDLPAEEARVLRGALLAARATELAELHRRGFRHSYGKGSDSARDVMTAEVEQHRRRIELLDRLIEALATAR*
Ga0070698_1001412011	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPRLELDLDDGDAGVLRGALLAARATELAELHRRGFRHSYGKASDSARESMSAEIEHHRRRIELLDRLIETLPTAD*
Ga0070699_1000513154	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MPRLELDLSAEEARVLRGALLAARAAELAELHRRGFRNSYGKGSDSAREVMTAEVEQHRRRIELLDRLIEALATAG*
Ga0070697_1014117341	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MPRLELDLDAGDAGVLRGALLAARATELAELHRRGFRHSYGKSSDSARESMSAEIEHHRRRIELLDRLIETLPTAD*
Ga0070686_1000593944	3300005544	Switchgrass Rhizosphere	MDDAVRLHLDLPADEARVLRGALLAAKATELAEAQRRGFRASYGKASESARDSMSAEVAHHLRRIELLDRLIAALADAKDVTEA*
Ga0070695_1002263762	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MARIALELDGEDARVLRGALLAARATELAELHRRGFRHSYGKASDSARESMSAEVEHHRRRIELLDRLIEALPGTD*
Ga0070695_1004282282	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MPRLELELDDAETRELRGALLAARATELAELHRRGFRHSYGKSSDSARESMSAEVEHHRRRIELLDRLIEALQKAT*
Ga0070696_1000575452	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MARLQLDLEAEELRTLRGALLAARATELAELHRRGFRHSAGYGSDSAREVLTAEVEQHRHRIELLDRLIEAMQPAD*
Ga0070696_1016250412	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MPRLELDLEDEELRTLRGALLAARATELAELHRRGFRHSYGRASDSARESMSAEVAHHRRRIELLDRLIEALPSPD*
Ga0070693_1011908011	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	PRLELELDDAETRELRGALLAARATELAELHRRGFRHAYGKSSDSARESMSAEIEHHRRRIELLDRLIEALQKAT*
Ga0068861_1020454832	3300005719	Switchgrass Rhizosphere	MARIALELDGEDARVLRGALLAARATELAELHRRGFRHSYGKASDSARESMSAEVEHHRRRIDLLDRLIEALPTAD*
Ga0079222_105208152	3300006755	Agricultural Soil	MPPLHLELDDEDARLLRGALLAARATELAELHRRGFRHSAGYGSDSARQVMTAEVDHHRRRIELLDRLIEALPKAI*
Ga0075433_101793302	3300006852	Populus Rhizosphere	MARIALELDAEDARVLRGALLAARATELAELHRRGFRHSYGKASDSARDSMSAEVRHHRRRIE
Ga0075433_108479432	3300006852	Populus Rhizosphere	MARIALELDGEDARLLRGALLAARATELAELHRRGFRHSYGKASDSARESMSAEVRHHRRRIEILDRLIEALPVAE*
Ga0075425_1005196942	3300006854	Populus Rhizosphere	MARLELDIPDGDVRTLRGALLAARATELAELHRRGFRHSAQYGSDSARAVMTAEVEQHRRRIELLDRLIEALATPD*
Ga0075425_1012111932	3300006854	Populus Rhizosphere	MPRLQLDLDAEEARTLRGALLAARATELAELHRRGFRHSYGKGSDSAREVMTAEVEQHRRRIELLDRLIEALPAPD*
Ga0075425_1025056392	3300006854	Populus Rhizosphere	TGLRRTDLMARLELDLDAEEGRVLRGALLAARATELGELQRRAFRHSYGKGTDSARSGMSAEVEQHRQRIELLDRLIDALAATSGND*
Ga0075434_1004918351	3300006871	Populus Rhizosphere	MPRLQLDLDAEEARTLRGALLAARATELGELHRRGFRHSYGKGSDSAREVMTAEVEQHRRRIELLDRLIEALPTPD*
Ga0075426_107372702	3300006903	Populus Rhizosphere	MARLELEIPDGDVRTLRGALLAARATELAELHRRGFRHSAQYGSDSARAVMTAEVEQHRRRIELLDRLIEALPTAD*
Ga0075424_1003989352	3300006904	Populus Rhizosphere	MPRLQLDLDAEEARTLRGALLAARATELGELHRRGFRHSYGKGSDSAREVMASEVEQHRRRIELLDRLIEALPAPD*
Ga0079216_116373431	3300006918	Agricultural Soil	MSHGEPRAPTIRIDLALEDEDIPILRGALLAARATELAELNRRGFRHSAGYGSDTAREVMSSEVEHHRRRIELLDRLIEAL
Ga0079219_107930132	3300006954	Agricultural Soil	VTRPDDPAPLHVELSAAEARTLRGALLAARATELAEAQRRGFRASYGKQSESARQGMTAEVEHHLRRIELLDRLIAALPDTKEA*
Ga0075435_1000233032	3300007076	Populus Rhizosphere	MARIALELDGEDARLLRGALLAARATELAELHRRGFRHSYGKASDSARESMSAEVRHHRRRIEILDRLIEALAVAE*
Ga0075435_1006235852	3300007076	Populus Rhizosphere	MARLGLEIPDGDVRTLRGALLAARATELAELHRRGFRHSAQYGSDSARAVMTAEVEQHRRRIELLDRLIEAL
Ga0105240_120939931	3300009093	Corn Rhizosphere	MPRLELELDDAEARELRGALLAARATELAELHRRGFRHAYGKSSDSARESMSAEIEHHRRRIELLDRLIEALQKAT
Ga0105245_103158462	3300009098	Miscanthus Rhizosphere	MPRLDLELDDDDAGVLRGALLAARATELAELHRRGFRHSYGKASDSARESMSAEVEHHRRRIELLDRLIEALQKAT*
Ga0114129_105861222	3300009147	Populus Rhizosphere	MSDGESEARTLRIDLSIADGDVPILRGALIAARATELAELHRRGFRHSAGYGSDSARTVMTAEVEHHRRRIELLDRLLEALSKDS*
Ga0114129_115387852	3300009147	Populus Rhizosphere	IALELDGEDARLLRGALLAARATELAELHRRGFRHSYGKASDSARESMSAEVRHHRRRIEILDRLIEALPVAE*
Ga0111538_107496952	3300009156	Populus Rhizosphere	MPIDLELERDERRILRGALLAARATELAEAHRRGFRASYEKQSESARQGMTAEVEHHLRRIELLDRLIAALGD*
Ga0075423_107475242	3300009162	Populus Rhizosphere	MPRLQLDLDAEEARTLRGALLAARATELGELHRRGFRHSYGKGSDSAREVMTAEVEQHRRRIELLDRLIEALPAPD*
Ga0075423_109050522	3300009162	Populus Rhizosphere	MARIAVELDGEDARVLRGALLAARATELAELHRRGFRHSYGKASDSARESMSAEVRHHRRRIELLDRLIEALRAVD*
Ga0075423_116237152	3300009162	Populus Rhizosphere	MARIALELDAEDARVLRGALLAARATELAELYRRGFRHSYGKASDSARESMSAEVEHHRRRIELLDRLIEALATAN*
Ga0105242_102956432	3300009176	Miscanthus Rhizosphere	MARIALELDGEDARVLRGALLAARATELAELHRRGFRHSYGKASDSARESMSAEVEHHRRRIELLDRLIDALATAD*
Ga0105248_124909621	3300009177	Switchgrass Rhizosphere	MPRLELDLDTEDIGVLRGALLAARATELAELHRRGFRHSAGYGSDSARAVMTTEVEHHRRRIELLDRLLEALRAAE*
Ga0105249_106514801	3300009553	Switchgrass Rhizosphere	ARAGIAGEPVWPRTTPRLRRTDLMPRLDLELDDDDAGVLRGALLAARATELAELHRRGFRHSYGKASDSARESMSAEIEHHRRRIELLDRLIEALQ*
Ga0126308_110660052	3300010040	Serpentine Soil	LDLSDDEARVLRGALLSARATELAEANRRGFRHSYGKGSESARETMSAEVAQHRGRIELLDRLIKALPKA*
Ga0126308_111831062	3300010040	Serpentine Soil	MARFELDLDPAELRTLRGALLAARATELAEVHRRSARLSFGYGSDSAREDMGSEVAQSRRRAELLDRLLEALRRPDADA*
Ga0126312_103864881	3300010041	Serpentine Soil	MAHLELDLSPDDARLLRGALLAARATELAEANRRGFRRSYDKGSDSARETMTAEVAHHRRRIELLDQVIDALPKG*
Ga0126312_107005922	3300010041	Serpentine Soil	MPRLDLDLEEEDARILRGALLAARATELAEAQRRGFRHSAGYGSDSARETMTAEVAHHRRRIELLDRLIAALKVPTPTGR*
Ga0126310_100280872	3300010044	Serpentine Soil	MARLELDLDPEEARVLRGALLAAKATELAEANRRGFRHSYGKASDSALATMSAEIAQHRRRIELLDRLLEALSRLD*
Ga0126311_102772313	3300010045	Serpentine Soil	MARIELDLSDDEARVLRGALLSARATELAEANRRGFRHSYGKGSESARETMSAEVAQHRGRIELLDRLIKALPKA*
Ga0126311_117348292	3300010045	Serpentine Soil	GESPSRIVRLELPVESEDDVPLLRGALLAARATELGEMQRRGFRHSYGKSSDSARSAMSAEVDHHARRLELLDRLIEALPTD*
Ga0126377_100671892	3300010362	Tropical Forest Soil	MARIALELDGEDARVLRGALLAARATELAELHRRGFRHSYGKASDSARESMSAEVRHHRRRIELLDRLLEALPTVD*
Ga0134125_109792992	3300010371	Terrestrial Soil	MARIALELDGEDARVLRGALLAARATELAELHRRGFRHSYGKGSDSARDVMTAEVEHHRRRIELLDRLI
Ga0134128_118256442	3300010373	Terrestrial Soil	MPRIELELEAEDLRGLRGALLAARATELGELHRRGFRHSYGKASDSARESMSAEVRHLRRRIELLDRLIEALPND*
Ga0134124_101591642	3300010397	Terrestrial Soil	MPRLELELDDAEARELRGALLAARATERAELHRRGSRHAYGKSSDSARESMSAEIEHHRRRIELLDRLIEALQKAT*
Ga0134127_103371922	3300010399	Terrestrial Soil	MPRIELELGAEDLRELRGALLAARATELGELHRRGFRHSYGKASDSARESMSAEVRHLRRRIELLDRLIEALPND*
Ga0134127_107004611	3300010399	Terrestrial Soil	IALELDGEDARVLRGALLAARATELAELHRRGFRHSYGKASDSARDSMSAEVAHHQRRIELLDRLIEALPTAD*
Ga0134127_134655641	3300010399	Terrestrial Soil	DPPPRLRRADLMARIALELDGEDARVLRGALLAARATELAELHRRGFRHSYGKASDSARESMSAEVAHHRRRIELLDRLIEALPPVDAAATEV*
Ga0137361_108391442	3300012362	Vadose Zone Soil	MPRIDIELSDDEARTLRGALLAARATELGELNRRGFRHSAGYGSDSARSVMTAEVEQHRRRIELLDRLIEALPTAN*
Ga0157216_104996202	3300012668	Glacier Forefield Soil	MARLELDLAADDVEILRGALLAARATELGEAHRRGFRRSAGYGSDSAREVMTAEVEHHRRRIELLDRLIEALPTSD*
Ga0137397_109297931	3300012685	Vadose Zone Soil	RVLRGALLAARATELAELHRRGFRHSAGYGSDSARQVMTAEVEQHRRRIELLDRLIEALHTAG*
Ga0164298_115452062	3300012955	Soil	MPRLELDLAAEEVRVLRGAILAARATELAELHRRGFRHSAGYGSDSAREVMTAEVEQHRRRIELLDRLIQRLTEA*
Ga0157378_104027262	3300013297	Miscanthus Rhizosphere	MPRLELELDDAETRELRGALLAARATELAELHRRGFRHSYGKSSDSARESMSAKIEHHHRRIELLDRLIEALQKAT*
Ga0132258_124832832	3300015371	Arabidopsis Rhizosphere	LRRPDLMPRLALDLAAEEVRVLRGAILAARATELAELHRRGFRHSAGYGSDSAREVMTAEVAQHRRRIELLDRLIEALQTPE*
Ga0132258_135494572	3300015371	Arabidopsis Rhizosphere	MPRLELELDDAEARELRGALLAARATELAELHRRGFRHSYGKSSDSARESMSAEIEHHHRRIELIDRLIEALPKAT*
Ga0132256_1004390162	3300015372	Arabidopsis Rhizosphere	MPRLDLELDDQDARALRGALLAARATELAELHRRGFRHSYGKSSDSARESMSAEIEHHPRRIELIDRLIEALPKAT*
Ga0132257_1009775971	3300015373	Arabidopsis Rhizosphere	PRLDLELDDQDARALRGALLAARATELAELHRRGFRHSYGKSSDSARESMSAEIEHHHRRIELIDRLIEALPKAT*
Ga0132255_1002474682	3300015374	Arabidopsis Rhizosphere	MPRLDLELDDQDARALRGALLAARATELAELHRRGFRHSYGESSDSARESMSAEIEHHHRRIELIDRLIEALPKAT*
Ga0190275_101288242	3300018432	Soil	MAHGEPPDRVIRLDLPIEDEDIPILRGALLAARATELAELNRRGFRHSAGYGSESARAVMSSEVEHHRRRIELLDRLIEALPRGGGST
Ga0190270_111334282	3300018469	Soil	MPRGEPQRRTIRVDLPIDDADIPILRGALLAARATELAELNRRGFRHSAGYGSDTAREVMSSEVEHHRRRIELLDRLIAALPSSAST
Ga0190270_124876992	3300018469	Soil	MAHGEPQAPSIRVDLPIEDDDVPILRGALLAARATELAELNRRGFRHSAGYGSETAREVMTSEVAHHRRR
Ga0190264_109821931	3300019377	Soil	AMWAALNTGTPDVALRLDMTLSDEEIPILRGALLAARATELAELQRRGYRLSTGYGTDSARDGMSAEVAQHRVRIELLDRLIEALRSNP
Ga0207653_102690031	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	PPRLRRADLMARIALELDGEDARVLRGALLAARATELAELHRRGFRHSYGKASESARESMSAEVAHHQRRIELLDRLIEALPTPD
Ga0207684_100688902	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPRLQLDLDTEEARTLRGALLAARATELAELHRRGFRHSAGYGSDSARQVMTTEVEQHRRRIELLDRLIETLPTAD
Ga0207684_106002902	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MARLELEIPDDDVRALRGALIAARATELAELHRRGFRHSAQYGSDSARAVMTAEVEQHRRRIDLLDRLIEALPTPD
Ga0207660_103874072	3300025917	Corn Rhizosphere	MARIALELDAEDARVLRGALLAARATELAELHRRGFRHSYGKASDSARDSMSAEVRHHRRRIELLDRLIEALPVTE
Ga0207660_116211231	3300025917	Corn Rhizosphere	IAGEPVWPRATPRLRRADLMPRLELELDDAEARELRGALLAARATELAELHRRGFRHAYGKSSDSARESMSAEIEHHRRRIELLDRLIEALKKAT
Ga0207662_100392952	3300025918	Switchgrass Rhizosphere	MPRLDLELDDDDAGVLRGALLAARATELAELHRRGFRHSYGKASDSARESMSAEIEQHRRRIEVLDRLIEALQKAT
Ga0207657_103800622	3300025919	Corn Rhizosphere	MPRLELELDDAEARELRGALLAARATELAELHRRGFRHAYGKSSDSARESMSAEIEHHRRRIE
Ga0207646_103970412	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MPRLQLDLDTEEARTLRGALLAARATELAELHRRGFRHSAGYGSDSARQVMTAEIEHHRRRIELLDRLIETLPTAD
Ga0207687_100441222	3300025927	Miscanthus Rhizosphere	MARIALELDGEDARVLRGALLAARATELAELHRRGFRHSYGKASDSARDSMSAEVAHHQRRIELLDRLIEALPTAD
Ga0207690_104174851	3300025932	Corn Rhizosphere	MPRLDIDLEREEVGILRGALLAARATELGELHRRGFRHSYGKGSDSAREVMTAEVEQHRRRIELLDRLIDVLAATSGND
Ga0207706_111689201	3300025933	Corn Rhizosphere	EVDGEDARVLRGALLAARATELAELHRRGFRHSYGKASDSARESMSAEVEHHRRRIDLLDRLIEALPTAD
Ga0207686_100945493	3300025934	Miscanthus Rhizosphere	MARIALELDGEDARVLRGALLAARATELAELHRRGFRHSYGKASDSARESMSAEVEHHRRRIELLDRLIDALATAD
Ga0207704_115701602	3300025938	Miscanthus Rhizosphere	MPRLELELDDAEARELRGALLAARATELAELHRRGFRHAYGKSSDSARESMSAEVEHHRRRIELLDRLIEALQKAT
Ga0207711_116427451	3300025941	Switchgrass Rhizosphere	AHAPPRLRRADLMPRLELDLDTEDIGVLRGALLAARATELAELHRRGFRHSAGYGSDSARAVMTTEVEHHRRRIELLDRLLEALRAAE
Ga0210067_10613791	3300025947	Natural And Restored Wetlands	MPRVELDLESADDLRLLRGALLAARATELAEAQRRGFRQSYGKASDSASASMGAEVAHHLRRIELLDRLIAAIAEAG
Ga0207640_111390242	3300025981	Corn Rhizosphere	MPRLELELDDAETRELRGALLAARATELAELHRRGFRHSYGKSSDSARESMSAEIEHHRRRIELLDRLIEALQKAT
Ga0207708_117155171	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MARIALELDAEDARVLRGALLAARATELAELHRRGFRHSYGKASDSARDSMSAEVRHHRRRIELLDRLIEALPVAE
Ga0207641_105163621	3300026088	Switchgrass Rhizosphere	LDLPADEARVLRGALLAAKATELAEAQRRGFRASYGKASESARDSMSAEVAHHLRRIELLDRLIAALADAKDATEA
Ga0207676_104597802	3300026095	Switchgrass Rhizosphere	VSHGDETVQLHLDLPPDDARALRGALLAAKATELAEAQRRGLRASYGKASESARDSMSAEVAHHLRRIELLDRLIAALADAKDATEA
Ga0207674_100776631	3300026116	Corn Rhizosphere	REEVGILRGALLAARATELGELHRRGFRHSYGKGSDSAREVMTAEVEQHRRRIELLDRLIDVLAATSGND
Ga0207675_1009761672	3300026118	Switchgrass Rhizosphere	MARIALELDGEDARVLRGALLAARATELAELHRRGFRHSYGKASDSARESMSAEVAHHRRRIELLDRLIEALPPVDAAATEV
Ga0207683_121940832	3300026121	Miscanthus Rhizosphere	MARIALELDAEDARVLRGALLAARATELDELHRRGFRHSYGKASDSARDSMSAEVRHHRRRIELLDRLIEALPVTE
Ga0256867_100735552	3300026535	Soil	MADETPSRLALDLSPDDVRTLRGALLSAKATEMAELQRRGYRLSTGYGTDAARAGMSAEVAQHRRRIELLDRLIAALRPDG
Ga0268264_109958021	3300028381	Switchgrass Rhizosphere	RARPPTRLRRADLMPRLELDLDDGDAGVLRGALLAARATELAELHRRGFRHSYGKASDSARESMSAEIEHHRRRIELLDRLIEALQKAT
Ga0307319_103174152	3300028722	Soil	MARLELELDPEEARILRGALLTARATELGELHRRGFRHSAGYGSDSAREVMSAEVEHHRRRIAVLDRLIETLARRSDPA
Ga0307284_104018042	3300028799	Soil	AAEEARVLRGALLAARATELAELHRRGFRHSAGYGSDSAREVMTSEVEQHRRRIELLDRLIEALPKAT
Ga0307310_106247662	3300028824	Soil	MPRLELDLAAEEARVLRGALLAARATELAELHRRGFRHSAGYGSDSAREVMTSEVEQHRRRIELLDRLIEALPKAT
Ga0307304_101983061	3300028885	Soil	MARLELDLAAEEARVLCGALLAARATELAELHRRGFRHSAGYGSDSAREVMTSEVEQHRRRIELLDRLIEALPKAT
Ga0247826_104584291	3300030336	Soil	RADGAARLRRPDLMPRLDIDLEREEVGILRGALLAARATELGELHRRGFRHSYGKGSDSAREVMTAEVEQHRKRIELLDRLIDVLAATSGND
Ga0299914_110357542	3300031228	Soil	AHGEPQASSIRVDLPIEDEDIPILRGALLAARATELAELNRRGFRHSAGYGSDSARQVMSAEVEHHRRRIELLDRLIEALSPIA
Ga0299913_101537842	3300031229	Soil	MAHGEPQASSIRVDLPIEDEDIPILRGALLAARATELAELNRRGFRHSAGYGSDSARQVMSAEVEHHRRRIELLDRLIEALSAIG
Ga0299913_110739392	3300031229	Soil	QAPLIRVDLPLEDEDIPILRGALLAARATELAELNRRGFRHSAGYGSDSARQVMSAEVEHHRRRMELLDRLIAALSAIG
Ga0307408_1006060412	3300031548	Rhizosphere	MPRGEPQRRTIRVDLPIDDADLPILRGALLAARATELAELNRRGFRHSAGYGSDSAREVMSAEVEHHRRRIELLDRLIAALPGRAST
Ga0310813_118135681	3300031716	Soil	MPRLELDLAAEEARVLRGALLAARATELAELHRRGFRHSAGYGSDSAREVMTAEVEQHRRRIELLDR
Ga0310813_120799201	3300031716	Soil	MAINLELDPDERRVLRGALLAARASELAEMQRRDFRQFAGYGSDSARMVMTSEVEQHRRRLELLDRLIEALIQT
Ga0307405_111534091	3300031731	Rhizosphere	MPRLELVLDADDVRILRGALLAAKATELAEAQRRGFRASYEKQSESARAGMTAEVEHHLRRIELLDRLIVALG
Ga0307468_1001168462	3300031740	Hardwood Forest Soil	MPSLELDLEKEDVGILRGALLAARATELGELHRRGFRHSYGKGSDSARDVMTAEVEHHRRRIELLDRLIEALATAN
Ga0307416_1014631732	3300032002	Rhizosphere	MRLDVDLDGDEDMRLLRGALLAAKATELAELQRWDSRLSFGYGTDSAREGMSAEVEQRRRRIELLDRLLEALASKGTSSA
Ga0307416_1035504832	3300032002	Rhizosphere	EDEDIPILRGALLAARATELAEMHRRGFRHSYGKGSDSARETMSAEVSHHRRRIELLDRLIEALPRGGGS
Ga0310810_100790642	3300033412	Soil	MPRLELDLAAEEARVLRGALLAARATELAELHRRGFRHSAGYGSDSAREVMTAEVEQHRRRIELLDRLIEALHTAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F042847

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences