Metagenome / Metatranscriptome Family F042925

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F042925
Family Type	Metagenome / Metatranscriptome
Number of Sequences	157
Average Sequence Length	56 residues
Representative Sequence	MVDLQTVEIELQNARQARINAELACCDIEELAEEIRQSHHAFMRLISERRSFRLH
Number of Associated Samples	115
Number of Associated Scaffolds	157

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	84.71 %
% of genes near scaffold ends (potentially truncated)	15.92 %
% of genes from short scaffolds (< 2000 bps)	80.25 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (68.153 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (17.197 % of family members)
Environment Ontology (ENVO)	Unclassified (39.490 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.146 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.45% β-sheet: 0.00% Coil/Unstructured: 38.55%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 157 Family Scaffolds
PF02955	GSH-S_ATP	36.31
PF13541	ChlI	29.94
PF13458	Peripla_BP_6	1.27
PF12680	SnoaL_2	1.27
PF05199	GMC_oxred_C	1.27
PF00590	TP_methylase	1.27
PF02913	FAD-oxidase_C	1.27
PF01418	HTH_6	0.64
PF07506	RepB	0.64
PF13603	tRNA-synt_1_2	0.64
PF00672	HAMP	0.64
PF13808	DDE_Tnp_1_assoc	0.64
PF13444	Acetyltransf_5	0.64
PF13560	HTH_31	0.64
PF02518	HATPase_c	0.64
PF13531	SBP_bac_11	0.64
PF00171	Aldedh	0.64
PF02021	UPF0102	0.64
PF13335	Mg_chelatase_C	0.64

COG ID	Name	Functional Category	% Frequency in 157 Family Scaffolds
COG0189	Glutathione synthase, LysX or RimK-type ligase, ATP-grasp superfamily	Translation, ribosomal structure and biogenesis [J]	72.61
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	1.27
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	1.27
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.64
COG0792	Predicted endonuclease distantly related to archaeal Holliday junction resolvase, YraN/UPF0102 family	Replication, recombination and repair [L]	0.64
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.64
COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	Cell cycle control, cell division, chromosome partitioning [D]	0.64
COG1737	DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains	Transcription [K]	0.64
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.64

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.15 %
Unclassified	root	N/A	31.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.15 %
Unclassified	root	N/A	31.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.15 %
Unclassified	root	N/A	31.85 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	66.88 %
Unclassified	root	N/A	31.85 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	66.88 %
Unclassified	root	N/A	31.85 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	39.49 %
Unclassified	root	N/A	31.85 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.64 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.64 %
Sneathiellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sneathiellales	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.85 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	19.11 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	2.55 %
Boseaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae	1.91 %
unclassified Sneathiellales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sneathiellales → unclassified Sneathiellales	0.64 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.64 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.64 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.85 %
unclassified Bradyrhizobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae	13.38 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	2.55 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.91 %
Bosea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea	1.91 %
Sneathiellales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sneathiellales → unclassified Sneathiellales → Sneathiellales bacterium	0.64 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.64 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.64 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.64 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.85 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	13.38 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	2.55 %
unclassified Bosea	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea	1.91 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.91 %
Afipia massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia massiliensis	0.64 %
Sneathiellales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sneathiellales → unclassified Sneathiellales → Sneathiellales bacterium	0.64 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.64 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.64 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.85 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	13.38 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	2.55 %
Bosea sp. AAP35	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. AAP35	1.27 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.91 %
Bosea sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp.	0.64 %
Afipia massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia massiliensis	0.64 %
Sneathiellales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sneathiellales → unclassified Sneathiellales → Sneathiellales bacterium	0.64 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.64 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.64 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.64 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10058083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	995	Open in IMG/M
3300002245\|JGIcombinedJ26739_100648273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	934	Open in IMG/M
3300002245\|JGIcombinedJ26739_101841236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	507	Open in IMG/M
3300002907\|JGI25613J43889_10004622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3729	Open in IMG/M
3300002914\|JGI25617J43924_10329929	Not Available	528	Open in IMG/M
3300002917\|JGI25616J43925_10136480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	988	Open in IMG/M
3300004268\|Ga0066398_10016501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1182	Open in IMG/M
3300004633\|Ga0066395_10799996	Not Available	566	Open in IMG/M
3300005332\|Ga0066388_100138622	All Organisms → cellular organisms → Bacteria	2992	Open in IMG/M
3300005332\|Ga0066388_100214131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2553	Open in IMG/M
3300005332\|Ga0066388_100302534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2244	Open in IMG/M
3300005332\|Ga0066388_102583709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	925	Open in IMG/M
3300005332\|Ga0066388_103477838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	804	Open in IMG/M
3300005332\|Ga0066388_105368734	Not Available	650	Open in IMG/M
3300005439\|Ga0070711_101809864	Not Available	536	Open in IMG/M
3300005533\|Ga0070734_10007726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	8554	Open in IMG/M
3300005533\|Ga0070734_10058783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2310	Open in IMG/M
3300005533\|Ga0070734_10498051	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300005764\|Ga0066903_101065225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1486	Open in IMG/M
3300005764\|Ga0066903_101559236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1250	Open in IMG/M
3300005764\|Ga0066903_108830583	Not Available	511	Open in IMG/M
3300005921\|Ga0070766_10532925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	783	Open in IMG/M
3300005995\|Ga0066790_10361107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	620	Open in IMG/M
3300006028\|Ga0070717_11961844	Not Available	528	Open in IMG/M
3300006041\|Ga0075023_100433848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	577	Open in IMG/M
3300006047\|Ga0075024_100006879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4577	Open in IMG/M
3300006047\|Ga0075024_100013125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3321	Open in IMG/M
3300006050\|Ga0075028_100226418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1018	Open in IMG/M
3300006086\|Ga0075019_10258617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1041	Open in IMG/M
3300006102\|Ga0075015_100174991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1130	Open in IMG/M
3300006354\|Ga0075021_10123702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1550	Open in IMG/M
3300006354\|Ga0075021_10842006	Not Available	594	Open in IMG/M
3300006893\|Ga0073928_10250948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1353	Open in IMG/M
3300007255\|Ga0099791_10002879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	6981	Open in IMG/M
3300007265\|Ga0099794_10751642	Not Available	521	Open in IMG/M
3300007788\|Ga0099795_10013037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	2539	Open in IMG/M
3300009038\|Ga0099829_10530399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	978	Open in IMG/M
3300009090\|Ga0099827_10576915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	969	Open in IMG/M
3300009143\|Ga0099792_11052401	Not Available	546	Open in IMG/M
3300009521\|Ga0116222_1346012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	644	Open in IMG/M
3300009523\|Ga0116221_1205398	Not Available	853	Open in IMG/M
3300009792\|Ga0126374_10272781	Not Available	1118	Open in IMG/M
3300009826\|Ga0123355_10380848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1838	Open in IMG/M
3300009826\|Ga0123355_10596936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp.	1312	Open in IMG/M
3300009826\|Ga0123355_11514787	Not Available	653	Open in IMG/M
3300009839\|Ga0116223_10023049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	4345	Open in IMG/M
3300010043\|Ga0126380_10350435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1074	Open in IMG/M
3300010043\|Ga0126380_10378668	Not Available	1042	Open in IMG/M
3300010046\|Ga0126384_10925427	Not Available	789	Open in IMG/M
3300010046\|Ga0126384_12178731	Not Available	533	Open in IMG/M
3300010048\|Ga0126373_12114156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	625	Open in IMG/M
3300010048\|Ga0126373_12748495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	549	Open in IMG/M
3300010049\|Ga0123356_10135177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2422	Open in IMG/M
3300010049\|Ga0123356_10249125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1853	Open in IMG/M
3300010049\|Ga0123356_11624887	Not Available	800	Open in IMG/M
3300010049\|Ga0123356_13730382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	526	Open in IMG/M
3300010159\|Ga0099796_10016799	Not Available	2168	Open in IMG/M
3300010358\|Ga0126370_10434863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1089	Open in IMG/M
3300010360\|Ga0126372_10734424	Not Available	969	Open in IMG/M
3300010360\|Ga0126372_11291950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	758	Open in IMG/M
3300010360\|Ga0126372_11742542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	665	Open in IMG/M
3300010361\|Ga0126378_11563392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	748	Open in IMG/M
3300010362\|Ga0126377_11641460	Not Available	717	Open in IMG/M
3300010366\|Ga0126379_11483624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	784	Open in IMG/M
3300010366\|Ga0126379_11971073	Not Available	687	Open in IMG/M
3300010366\|Ga0126379_11989560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	684	Open in IMG/M
3300010366\|Ga0126379_12807364	Not Available	583	Open in IMG/M
3300010376\|Ga0126381_100575643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1599	Open in IMG/M
3300010398\|Ga0126383_12960869	Not Available	555	Open in IMG/M
3300010863\|Ga0124850_1048610	Not Available	1333	Open in IMG/M
3300010876\|Ga0126361_10229168	Not Available	517	Open in IMG/M
3300011120\|Ga0150983_11225762	Not Available	586	Open in IMG/M
3300011269\|Ga0137392_10924238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	718	Open in IMG/M
3300012189\|Ga0137388_10807539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	869	Open in IMG/M
3300012202\|Ga0137363_10003219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9895	Open in IMG/M
3300012202\|Ga0137363_10762226	Not Available	820	Open in IMG/M
3300012202\|Ga0137363_11224747	Not Available	637	Open in IMG/M
3300012205\|Ga0137362_10011182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6573	Open in IMG/M
3300012205\|Ga0137362_10521477	Not Available	1027	Open in IMG/M
3300012205\|Ga0137362_11328781	Not Available	604	Open in IMG/M
3300012208\|Ga0137376_10665458	Not Available	899	Open in IMG/M
3300012361\|Ga0137360_11098625	Not Available	687	Open in IMG/M
3300012362\|Ga0137361_11457773	Not Available	607	Open in IMG/M
3300012917\|Ga0137395_10449896	Not Available	925	Open in IMG/M
3300012948\|Ga0126375_11487007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	578	Open in IMG/M
3300012948\|Ga0126375_11639319	Not Available	555	Open in IMG/M
3300012971\|Ga0126369_12049485	Not Available	660	Open in IMG/M
3300016319\|Ga0182033_11462256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	616	Open in IMG/M
3300016319\|Ga0182033_11885366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	543	Open in IMG/M
3300016357\|Ga0182032_10694542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	854	Open in IMG/M
3300017821\|Ga0187812_1310052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	501	Open in IMG/M
3300017942\|Ga0187808_10389131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	636	Open in IMG/M
3300017947\|Ga0187785_10077402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1294	Open in IMG/M
3300017961\|Ga0187778_11335083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	506	Open in IMG/M
3300017970\|Ga0187783_10420495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	971	Open in IMG/M
3300017972\|Ga0187781_10512447	Not Available	862	Open in IMG/M
3300017972\|Ga0187781_10817189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	677	Open in IMG/M
3300017974\|Ga0187777_11322391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	530	Open in IMG/M
3300017975\|Ga0187782_10862146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	702	Open in IMG/M
3300018001\|Ga0187815_10359875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	618	Open in IMG/M
3300018060\|Ga0187765_10790176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	632	Open in IMG/M
3300018088\|Ga0187771_10097026	Not Available	2369	Open in IMG/M
3300018468\|Ga0066662_11977631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. AAP35	610	Open in IMG/M
3300020580\|Ga0210403_10761553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	772	Open in IMG/M
3300021168\|Ga0210406_10102838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2427	Open in IMG/M
3300021170\|Ga0210400_10155430	Not Available	1844	Open in IMG/M
3300021178\|Ga0210408_11000888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	647	Open in IMG/M
3300021180\|Ga0210396_10506330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia massiliensis	1056	Open in IMG/M
3300021401\|Ga0210393_10466284	Not Available	1031	Open in IMG/M
3300021401\|Ga0210393_10520421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	972	Open in IMG/M
3300021432\|Ga0210384_10500228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1094	Open in IMG/M
3300021476\|Ga0187846_10057505	Not Available	1711	Open in IMG/M
3300021478\|Ga0210402_10614553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1007	Open in IMG/M
3300021479\|Ga0210410_11124352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	676	Open in IMG/M
3300021560\|Ga0126371_10002432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16057	Open in IMG/M
3300021560\|Ga0126371_10173828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2232	Open in IMG/M
3300021560\|Ga0126371_11099089	Not Available	934	Open in IMG/M
3300021560\|Ga0126371_11516671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	798	Open in IMG/M
3300021560\|Ga0126371_13239753	Not Available	550	Open in IMG/M
3300021861\|Ga0213853_10675235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1563	Open in IMG/M
3300021861\|Ga0213853_10770668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2139	Open in IMG/M
3300021861\|Ga0213853_10930907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sneathiellales → unclassified Sneathiellales → Sneathiellales bacterium	764	Open in IMG/M
3300022527\|Ga0242664_1070871	Not Available	673	Open in IMG/M
3300022722\|Ga0242657_1098831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	716	Open in IMG/M
3300024347\|Ga0179591_1048018	Not Available	2875	Open in IMG/M
3300026320\|Ga0209131_1003661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	10181	Open in IMG/M
3300026341\|Ga0257151_1011567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	917	Open in IMG/M
3300026341\|Ga0257151_1033166	Not Available	554	Open in IMG/M
3300026355\|Ga0257149_1028988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	774	Open in IMG/M
3300026376\|Ga0257167_1038230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	725	Open in IMG/M
3300026377\|Ga0257171_1057572	Not Available	676	Open in IMG/M
3300026490\|Ga0257153_1021135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1333	Open in IMG/M
3300026496\|Ga0257157_1000598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	4252	Open in IMG/M
3300027527\|Ga0209684_1030428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	827	Open in IMG/M
3300027570\|Ga0208043_1201259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	503	Open in IMG/M
3300027635\|Ga0209625_1063818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. AAP35	823	Open in IMG/M
3300027655\|Ga0209388_1002462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4501	Open in IMG/M
3300027773\|Ga0209810_1030047	Not Available	3242	Open in IMG/M
3300027846\|Ga0209180_10098944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1661	Open in IMG/M
3300027875\|Ga0209283_10862001	Not Available	551	Open in IMG/M
3300027894\|Ga0209068_10068332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1831	Open in IMG/M
3300027898\|Ga0209067_10852236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	534	Open in IMG/M
3300027905\|Ga0209415_10018751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10904	Open in IMG/M
3300027910\|Ga0209583_10094035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1144	Open in IMG/M
3300027915\|Ga0209069_10001321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12477	Open in IMG/M
3300027915\|Ga0209069_10003929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7541	Open in IMG/M
3300031561\|Ga0318528_10688976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	547	Open in IMG/M
3300031720\|Ga0307469_10014879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4002	Open in IMG/M
3300031890\|Ga0306925_10186117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2238	Open in IMG/M
3300031942\|Ga0310916_10262603	Not Available	1457	Open in IMG/M
3300032160\|Ga0311301_10051967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9326	Open in IMG/M
3300032180\|Ga0307471_100229007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1891	Open in IMG/M
3300032180\|Ga0307471_101303633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	888	Open in IMG/M
3300032205\|Ga0307472_101315138	Not Available	697	Open in IMG/M
3300032261\|Ga0306920_103869020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	546	Open in IMG/M
3300032783\|Ga0335079_11051949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	827	Open in IMG/M
3300033806\|Ga0314865_082666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	837	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.54%
Host-Associated	Host-Associated	4.46%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.80%
Aquatic	Environmental → Aquatic	12.74%
Arthropoda	Host-Associated → Arthropoda	4.46%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.17%
Sediment	Environmental → Aquatic → Sediment	8.28%
Digestive System	Host-Associated → Arthropoda → Digestive System	4.46%
Freshwater	Environmental → Aquatic → Freshwater	3.82%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.64%
Cave	Environmental → Terrestrial → Cave	0.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.78%
Loam	Environmental → Terrestrial → Soil → Loam	12.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.28%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.64%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	4.46%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.91%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.91%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.64%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.28%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.01%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	4.46%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.18%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.91%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.27%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.64%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.64%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.64%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	17.20%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.38%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	8.28%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.28%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.73%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	4.46%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.18%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.55%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.55%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	1.91%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.27%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.64%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.64%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.64%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.64%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.64%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.64%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.64%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026341	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-A	Environmental	Open in IMG/M
3300026355	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-A	Environmental	Open in IMG/M
3300026376	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-B	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033806	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_20	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100580832	3300000597	Forest Soil	MVDLQTVETELENARQARINAELACSDIEELAEEIRQSHHAFLRLIAERRSFRLH*
JGIcombinedJ26739_1006482732	3300002245	Forest Soil	MVDHQAVEIELHNARQARINAELACCDIEELTEEIRQSQHAFMRLLSERRSFRLH*
JGIcombinedJ26739_1018412362	3300002245	Forest Soil	MVDHQAVEIELQNARQARINAELACCDIEELAEEIRQSHHAFMRLLSERRSFRLH*
JGI25613J43889_100046225	3300002907	Grasslands Soil	MAREKGDGMVDLQTVEIELQNARQARINAELASRDVEVLAEEIRQSHDAFMRLLSERRKFRLH*
JGI25617J43924_103299292	3300002914	Grasslands Soil	MVDLQTVEIELQNARQARINAELACCDVEELAEEIRQTHGAFMRLLSERRKFRLH*
JGI25616J43925_101364802	3300002917	Grasslands Soil	MVDLQTVEIELQNARQARINAELASCDVEVLAEEIRQSHDAFMRLLSERRKFRLH*
Ga0066398_100165011	3300004268	Tropical Forest Soil	MVDFQTIEIELQNARQARINAELACYDMEELAEAIRQSHHAFMRLIAERRSFRLH*
Ga0066395_107999962	3300004633	Tropical Forest Soil	MVDFQTIEIELQNARQARINAELACCDMEELAEAIRQSHQAFMRLIAERRSFRLH*
Ga0066388_1001386223	3300005332	Tropical Forest Soil	MVDFQTIEIELQNARQARINAELACCDIEELAEAIRQSHHAFMRLIAERPSFGLH*
Ga0066388_1002141311	3300005332	Tropical Forest Soil	MVDLQSVEIELQNARQARINAELACCDIEELTEEIRQSHHAFMRLISERRSFRLH*
Ga0066388_1003025342	3300005332	Tropical Forest Soil	MVDLQTVEIELQNARQARINAELASSDIEELAEEIRQTHDAFMRLLSERRCFRLH*
Ga0066388_1025837092	3300005332	Tropical Forest Soil	MVDLQAVETELQNARQARINAELACCDIEELTEEIRQSHRAFMRFLSERRRFRLH*
Ga0066388_1034778382	3300005332	Tropical Forest Soil	MVDLQAVEIELQNARRARINAELACCDIEELTEEIRQSHDAFLRGIAERRSLRLH*
Ga0066388_1053687342	3300005332	Tropical Forest Soil	FWFGRAPGPKKGDSMIDFQTVETELQNARQARINAELACCDIEELAEEIRQSHRAFMRLISERRSLRLH*
Ga0070711_1018098642	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	QTVEIELQNARQARINAELACCDVEELAEEIRQSHHAFMRLISERRSFRLH*
Ga0070734_100077267	3300005533	Surface Soil	VIDLQTVEIELQNARQARINAELASCDVEELAEEIRQSHHAFMRLMSERRSFRLH*
Ga0070734_100587833	3300005533	Surface Soil	MVDLHAVEIELQKARKARIRAELACCDIEELTEEIRRFHHASMRRAFVRHGVGLH*
Ga0070734_104980512	3300005533	Surface Soil	MVDLHAVEIELQNARRARINAQLACCDIEELTDEIRRAHHVFMRRVAVRRGIGMR*
Ga0066903_1010652252	3300005764	Tropical Forest Soil	MVDLQAVEIELQNARQARINAELACCDIEELTEEIRQSHLAFMRLISERRSFRLH*
Ga0066903_1015592362	3300005764	Tropical Forest Soil	MVDFQTIEIELQNARQARINAELACCDMEELAEAIRQSHHAFMRLIAERPSFGLH*
Ga0066903_1088305832	3300005764	Tropical Forest Soil	LRKGDCMVDFQTIEIELQNARQARINAELACCDMEELAEAIRQSHQAFMRLIAERRSFRLH*
Ga0070766_105329252	3300005921	Soil	MVDLRTVEIELHNARQARINAELACCDIEELAEEIRQSHHAFMRLMAEQRG
Ga0066790_103611072	3300005995	Soil	MIDLKAVEVELHNARQARINAELACCDIEELAEEIRQSHFAFMRLMAAQRGVRLH*
Ga0070717_119618441	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MYVDLKVVEIELHNARQARINAELASCDVEEFAEEIRQSHHAFMRLMSEQRGFRLH*
Ga0075023_1004338482	3300006041	Watersheds	MVDLQAVEIELNNARKARINAELACCDIEELTEEIRQSHHAFMQLISERRGFRLH*
Ga0075024_1000068792	3300006047	Watersheds	MVDLQAVEIELHNARRARIKAELACSDIEELTEEIRQSHHAFRRLVLEQCGIMRH*
Ga0075024_1000131252	3300006047	Watersheds	MVDLQAVEIELHNARQARINAELACCDIEELTEEIRQSHDAFMRLMSERRSIMMH*
Ga0075028_1002264182	3300006050	Watersheds	MVDLQAVEIELHNARQARINAELACCDIEELTEEIRQSHDAFMRSCRSGAAS*
Ga0075019_102586172	3300006086	Watersheds	MVDLQAVEIELLKARHARIKAELACYDIEELTEEIRQSHQAFMRSISGQRGVPLH*
Ga0075015_1001749911	3300006102	Watersheds	MVDLQAVEIELLKARHARIKAELACYDIEELTEEIRQSHQAFMRSISGQR
Ga0075021_101237024	3300006354	Watersheds	MVDLQAVEVELQNARQARINAELACCDIEELTEEIRQSHHAFLRLISERRSFRLH*
Ga0075021_108420061	3300006354	Watersheds	VPWARKGDDMVDLQAVEIELHNARQARINAELACCDIEELTEEIRQSHDAFMRLMSERRSIMMH*
Ga0073928_102509482	3300006893	Iron-Sulfur Acid Spring	MYVDLKAVEIELHNARQARINAELACCDIEELAEEIRQSHHAFMRLMSEQRGLRLH*
Ga0099791_100028793	3300007255	Vadose Zone Soil	MVDLQTVEIELQNARQARINAELACCDIEELAEEIRQTHHAFMRLLSERRSFRLH*
Ga0099794_107516422	3300007265	Vadose Zone Soil	MVDLQAAQIELQNARRARINAQLACCDIEELTEEIRRAHHAFLRRVAVRRGVGLR*
Ga0099795_100130372	3300007788	Vadose Zone Soil	MVDLQTVEIELQNARQARINAELACSDIEELAEEIRQSHHAFMRLLSERRSFRLH*
Ga0099829_105303992	3300009038	Vadose Zone Soil	MVDLQTVEIELQNARQARINAELACCDIEELAQEIRQSHHAFMRLISERRSFRLH*
Ga0099827_105769152	3300009090	Vadose Zone Soil	MVDLQTVEIELQNARQARINAELACCDIEELAEEIRQSHHAFMRLISERRSFRLH*
Ga0099792_110524011	3300009143	Vadose Zone Soil	MREGDIMVDLQTVEIALHNDRQARIGAELACCDIEELTEEIRQSHHAFMRLLSERRSFRLH*
Ga0116222_13460122	3300009521	Peatlands Soil	MVDLRTVELELHNARQARINAELACCDIEELAEEIRQSHHAFMRLMAEQRGLRLH*
Ga0116221_12053982	3300009523	Peatlands Soil	MVDLRTVEIELHNARQARINAELACCDIEELAEEIRQSHHAFMRLMAEQRGLRLH*
Ga0126374_102727812	3300009792	Tropical Forest Soil	MVDQQAVEIELEKARKARINAELACCDIEELTEEIRQSHNAFLRAVEERRSFRLH*
Ga0123355_103808482	3300009826	Termite Gut	MVDLQAAQIELQNARRARIAAQLVCCDIEDLTDEIRRARHAFMRRTAVRRGLGMR*
Ga0123355_105969362	3300009826	Termite Gut	MVDLQAAQIELQNARRARINAELVCCVIEDLTDEIRRARHAFMRRTAVRRGIGVR*
Ga0123355_115147872	3300009826	Termite Gut	MVDLQAVQIELQNARRARINAELACCDIEDLTDEIQRARHAFMLRRAAVRRGIGMR*
Ga0116223_100230491	3300009839	Peatlands Soil	MVDLRTVELELHNARQARINAELACCDIEELAEEIRQAQHAFMRLMAEQRGLRLH*
Ga0126380_103504352	3300010043	Tropical Forest Soil	MVDQQAVEIELEKARKARINAELACCDIEELTEEIRQSHNAFLRAIEERRSFRLH*
Ga0126380_103786682	3300010043	Tropical Forest Soil	ETELRNARKARINAELACCDVEELAAEIRQSRDAFMRLIAERREFRLH*
Ga0126384_109254272	3300010046	Tropical Forest Soil	MVDLQAVEIELQNARRARINAELACCDIEELTEEIRQSHDAFLRGIAERRSLQLH*
Ga0126384_121787311	3300010046	Tropical Forest Soil	MVDLQTVEIELQNARQARINAELASSDIEELAEEIRQSHDAFMRLLSERRCFRLH*
Ga0126373_121141561	3300010048	Tropical Forest Soil	MVDFQTVETELKNARQARINAELACSDIEELAEEIRQSHHAFMQLLSERRGFRLH*
Ga0126373_127484952	3300010048	Tropical Forest Soil	MVDLHAVEIELQNARKARIRAEVACCDIEELTEEIRRSHHAFMRQASVWSGVGLH*
Ga0123356_101351772	3300010049	Termite Gut	MVDLQAVQIELQNARRARINAELACCDIEDLTDEIQRARHAFMLRRAGVRRGIGMR*
Ga0123356_102491252	3300010049	Termite Gut	MVDLQAAQIELQNARRARIDAQLVCCDIEDLTDEIRRARHAFMRRTAVRRGVGMR*
Ga0123356_116248872	3300010049	Termite Gut	MVDLQAAQIELQNARRARINAELVCCDIENLTDEIRRARHAFMRQTAVRRGIGMR*
Ga0123356_137303821	3300010049	Termite Gut	MVDLRAAQIELQNARRARINAQLACCDIEELTDEIRRARHAFVRRTAVRHGVGMR*
Ga0099796_100167992	3300010159	Vadose Zone Soil	MVDLQTVEIELQNARRARINAELACCDVEELAEEIRQSHHAFMRLLSERRSFRLH*
Ga0126370_104348631	3300010358	Tropical Forest Soil	MVDLQAVEIELQNARQARINAELACCDIEELTEEIRQSHHAFMRLISERRSFRLH*
Ga0126372_107344242	3300010360	Tropical Forest Soil	MVDLQAAQIELQNARRARINAELACCDIEELTDEIRRSHHAFMRRVSVRRGVGMR*
Ga0126372_112919502	3300010360	Tropical Forest Soil	MVDLQTVEIELQNARQARINAELASSDIEELAEEIRQTHHAFMRLLSERRKFRLH*
Ga0126372_117425422	3300010360	Tropical Forest Soil	MVDLQTLEIELQNARQARINAELACCDIEELAEEIRQSHDAFMRLITERRCFRLH*
Ga0126378_115633922	3300010361	Tropical Forest Soil	MVDLQAVAIELQNARKARINAELACCDIEELTEEIRQSHHAFMRLIAERHGLRLH*
Ga0126377_116414602	3300010362	Tropical Forest Soil	MVDLQAVEIELQNARRARINAELACCDIEELTEAIRQSHDAFLRGIAERRSSLLH*
Ga0126379_114836241	3300010366	Tropical Forest Soil	MVDFQTVEIELKNARQARINVELACCDIEELAEEIRQSHHAFMRLISERRGFRLH*
Ga0126379_119710731	3300010366	Tropical Forest Soil	RKGDCMVDFQTIEIELQNARQARINAELACCDMEELAEAIRQSHQAFMRLIAERRSFRLH
Ga0126379_119895602	3300010366	Tropical Forest Soil	MVDLQTVEIELQNARQARINAELASSDIEELAEEIRQSHHAFMRLIAERRSFSLH*
Ga0126379_128073641	3300010366	Tropical Forest Soil	MVDQQAVEIELQNARRARVNAELACCDIEELTEEIRQSHHAFLRAIEERRSFRLH*
Ga0126381_1005756432	3300010376	Tropical Forest Soil	MVDLHAVEIELQNARKARIRAEVACCDIEELTEEIRRSHHAFMRRASVRCGVGLH*
Ga0126383_129608692	3300010398	Tropical Forest Soil	MVDLQTVETELANARQARINAELACSDIEELAEEIRQSHHAFMRLIAERRGFRLH*
Ga0124850_10486103	3300010863	Tropical Forest Soil	MVDFQTVETELKNARQARINAELACSDIEELAEEIRQSHHIFMQLLSERRGFRLH*
Ga0126361_102291682	3300010876	Boreal Forest Soil	LHNARQARINAELACCDVEELAEEIRQSHHAFMRLMAEQRGIRLH*
Ga0150983_112257622	3300011120	Forest Soil	EPKQGDSMVDLQTVEIELQNARQARINAELACCDVEELAEEIRQSHHAFMRLISERRSFRLH*
Ga0137392_109242381	3300011269	Vadose Zone Soil	MAREKGDGMVDLQTVEIELQNARQARINAELASCDVEELAEEIRQSHHAFIRLIAERRKFRLH*
Ga0137388_108075392	3300012189	Vadose Zone Soil	MVDLQTVEIELKNARQARINAELACCDIEELAEEIRQSHHAFMRLISERRGFRLH*
Ga0137363_100032199	3300012202	Vadose Zone Soil	MVDLQTVEIELQNARQARINAELASRDVEVLAEEIRQSHDAFMRLLSERRKFRLH*
Ga0137363_107622262	3300012202	Vadose Zone Soil	GMVDLQTVEIELQNARQARINAELACCDIEELAEEIRQSHHAFMRLIAERRSFRLH*
Ga0137363_112247472	3300012202	Vadose Zone Soil	LQNARQARINAELACCDVEELAEEIRQTHHAFMRLLSERRKFRLH*
Ga0137362_100111822	3300012205	Vadose Zone Soil	MVDLQTVEMELQNARQARINVELACCDVEELAEEIRQSHDAFMRLLSERRSFRLH*
Ga0137362_105214772	3300012205	Vadose Zone Soil	MVDLQTVEIELQNARQARLNAELACCDVEELAEEIRQTHHAFMRLLSERRKFRLH*
Ga0137362_113287811	3300012205	Vadose Zone Soil	MVDLQTVEIELQNARQARINAELACCDIEELAEEIRQTHHAFMRLLSERRKFRLH*
Ga0137376_106654582	3300012208	Vadose Zone Soil	MGSEPEKWGRMVDLQTLEIELQNARQARINAELACCDIEELAEEIRQSHGAFMRLIAERRKFKLH*
Ga0137360_110986252	3300012361	Vadose Zone Soil	MVDFQAVEIELHNARQARINAELACCDIEELTEEIRQSHHAFMRLISEQRSVRLH*
Ga0137361_114577732	3300012362	Vadose Zone Soil	MVDLQTVEIELQNARQARINAELACCDVEELAEEIRQTHHAFMRLLSERRKFRLH*
Ga0137395_104498961	3300012917	Vadose Zone Soil	MVDLKAVEIELHNARQARINAELACCDIEELAAEIRQSHLAFRQLMAEQRGIRLH*
Ga0126375_114870071	3300012948	Tropical Forest Soil	MVDLQTVEIELQNARQARINAELACCDIEELAEEIRQTHHAFMRLLSERRQFRLH*
Ga0126375_116393192	3300012948	Tropical Forest Soil	MVDLQTLEVELQNARQARINAELACCDIEELAEEIRQSHDAFMRLIAERRKFRLH*
Ga0126369_120494852	3300012971	Tropical Forest Soil	IEIELQNARQARINAELACCDMEELAEAIRQSHQAFMRLIAERRSFRLH*
Ga0182033_114622561	3300016319	Soil	MVDLQAVEIELQNARKARINAELACCDIEQLTEEIRQSHHAFMRLISERRGFR
Ga0182033_118853661	3300016319	Soil	MVDLQTVEIELQNARQARINAELASSDIEELAEEIRQTHHAFMRLLSERRKFRLH
Ga0182032_106945421	3300016357	Soil	MVDLQTVEIELQNARQARINAELACYDIEELTEEIRQSHHAFMRLISERRGFRLH
Ga0187812_13100522	3300017821	Freshwater Sediment	MVDLQAVQIELQNARRARINAQLACCDIEELTEEIRRSHHAFMRRTAVRRGVGMR
Ga0187808_103891311	3300017942	Freshwater Sediment	MVDLQAVQIELQNARRARINAQLACCDIEELTEEIRRSHRAFMRRAAVRRGVGMR
Ga0187785_100774022	3300017947	Tropical Peatland	MIDLKAVETDLDNARQARINAELICCEIEELAEEIRQARLAFMQLKSAWRGIRLH
Ga0187778_113350832	3300017961	Tropical Peatland	MVDFQTVEIELQNARQARINAEMACCDIEELAEEIRQSHHAFMRLIAERRNFRLH
Ga0187783_104204952	3300017970	Tropical Peatland	MVDLQTVETELQNARQARINAELACCDIEELAEEIRQSHDAFMRLIAEWRSFRLH
Ga0187781_105124471	3300017972	Tropical Peatland	MIDLKAVEVELHNARQARINAELACCDVEEMADDIRRAHYAFLRRTSVRRGIGMR
Ga0187781_108171892	3300017972	Tropical Peatland	MVDLQTVEIELQNARRARINAELACCDIEELAEQIRQSHHAFMRLIAERREFRLH
Ga0187777_113223911	3300017974	Tropical Peatland	MVDLQTVEIELQNARQARINAELASSDIEELAEEIRQSHDAFMRLLSERRSFRLH
Ga0187782_108621462	3300017975	Tropical Peatland	MVDLQAAQIELQNARRARINAQLACCDIEELTEEIRRSHRAFMRQVSVRRGVGMR
Ga0187815_103598752	3300018001	Freshwater Sediment	MVDLQAVQIELQNARRARINAQLACCDIEELTEEIRRSHRAFMRRTAVRRGVGMR
Ga0187765_107901762	3300018060	Tropical Peatland	MVDLQTVEIELQNARQARINAELACCDVEELAEEIRQSHDAFMRLIAERREFRLH
Ga0187771_100970263	3300018088	Tropical Peatland	MVDLQAVQIELQNARRARINAQLACCDIEELTEEIRRSHRAFVRRTAVRRGVGMR
Ga0066662_119776311	3300018468	Grasslands Soil	MVDLQTVEIELQNARQARINAELACCDVEELAEEIRQSHDAFMRLIAERRT
Ga0210403_107615532	3300020580	Soil	MVDLQTVEIELQNARQARINAELACCDIEELAEEIRQSRHAFIRLISERRSFRLH
Ga0210406_101028382	3300021168	Soil	MVDLQTVEIELQNARQARINAELACCDIEELAEEIRQSHHAFMRLIWERRSFRLH
Ga0210400_101554302	3300021170	Soil	MVDLQTVEIELQNARQARINAELACCDIEELAEEIRQSHHAFMRLISERRSFRLH
Ga0210408_110008882	3300021178	Soil	MVDHQAVEIELHNARQARIGAELACCDIEELTEEIRQSHHAFMRLLSERRSFRLH
Ga0210396_105063302	3300021180	Soil	MVDLRTVEIELHNARQARINAELACCDIEELAEEIRQSHHAFMRLMAEQRGVRLH
Ga0210393_104662842	3300021401	Soil	MVDLHAVEIELQNARRARINAQLACCDIEELTEEIRRSRHAFVRRTTVRRGVGMR
Ga0210393_105204212	3300021401	Soil	MVDLRTVEIELHNARQARINAELACCDIKELAEEIRQSHHAFMRLMAEQRGVRLH
Ga0210384_105002282	3300021432	Soil	MVDHQAVEIELQNARQARINAELACCDIEELTEEIRQSHHAFMQVLSERRSFRLH
Ga0187846_100575052	3300021476	Biofilm	MVDLQTVEIELQNARQARINAELACCDVEELAEEIRQTHGAFMRLLSERRKFRLH
Ga0210402_106145531	3300021478	Soil	IVEIELQNARQARINAELASSDVEELAEEIRQSHDAFMRLLSERRKFRLH
Ga0210410_111243522	3300021479	Soil	LRKGKTMVDLRTVEIELQNARQARINAELACCDIEELAEEIRQSHHAFMRLMAE
Ga0126371_1000243216	3300021560	Tropical Forest Soil	MVDFQTIEIELQNARQARINAELACCDMEELAEAIRQSHQAFMRLIAERRSFRLH
Ga0126371_101738281	3300021560	Tropical Forest Soil	MVDLQSVEIELQNARQARINAELACCDIEELTEEIRQSHHAFMRLISERRSFRLH
Ga0126371_110990892	3300021560	Tropical Forest Soil	MVDFQTVETELKNARQARINAELACSDIEELAEEIRQSHHAFMQLLSERRGFRLH
Ga0126371_115166712	3300021560	Tropical Forest Soil	MVDLQAVAIELQNARKARINAELACCDIEELTEEIRQSHHAFMRLIAERHGLRLH
Ga0126371_132397532	3300021560	Tropical Forest Soil	RKGDCMVDFQTIEIELQNARQARINAELACYDMEELAEAIRQSHHAFMRLIAERPSFGLH
Ga0213853_106752352	3300021861	Watersheds	MVDLQAVEIELHNARRARINAELACCDIEELTEEIRQSHQVFRRLMLKRRSDRLH
Ga0213853_107706682	3300021861	Watersheds	MVDLQAVEIELHNARQARINAELACCDIEELTEEIRQSHDAFMRLMSERRSIMMH
Ga0213853_109309072	3300021861	Watersheds	VEGPKSRSREGDAMVDLQAAQIELQNARRARINAQLACCDIEELTEEIRRAHHAFMRQVAVRRGLGMR
Ga0242664_10708712	3300022527	Soil	LKNKMVDFHAVEIELQNARKARMRAEVACCDIEELTEEIRRSHHAFMRRVSVRHGAGLH
Ga0242657_10988311	3300022722	Soil	RETSERDSRERQGDKMVDFHAVEIELQNARKARMRAEVACCDIEELTEEIRRSHHAFMRRVSVRHGAGLH
Ga0179591_10480184	3300024347	Vadose Zone Soil	MAREKGDGMVDLQTVEIELQNAPPGPQSMRKLASRDVEVLAEEIRQSHDAFMRLLSERRKFRLH
Ga0209131_10036612	3300026320	Grasslands Soil	MAREKGDGMVDLQTVEIELQNARQARINAELASRDVEVLAEEIRQSHDAFMRLLSERRKFRLH
Ga0257151_10115671	3300026341	Soil	MVDLQTVEIELQNARQARIGAELACCDIEELTEEIRQSQHAFMRLLSERRSFRLH
Ga0257151_10331661	3300026341	Soil	MVDLQTVEIELQNARQARINAELACSDIEELAEEIRQSHHAFMRLLSERRKFRLH
Ga0257149_10289881	3300026355	Soil	MVDHQAVEIELHNARQARINAELACCDIEELTEEIRQSQHAFMRLLSERRSFRLH
Ga0257167_10382302	3300026376	Soil	MVDLQTVEIELQNARQARINAELACCDIEELAEEIRQSHHAFMRLLSERRKFRLH
Ga0257171_10575721	3300026377	Soil	EGQVQHPRKGDGMVDLQTVEIELQNARQARINAELACSDIEELAEEIRQSHHAFMRLLSERRSFRLH
Ga0257153_10211352	3300026490	Soil	MVDLQTVEIELQNARQARINAELACSDIEELAEEIRQSHHAFMRLLSERRSFRLH
Ga0257157_10005986	3300026496	Soil	LQTVEIELQNARQARINAELACCDIEELAEEIRQSHHAFMRLLSERRKFRLH
Ga0209684_10304282	3300027527	Tropical Forest Soil	MVDLRALEIELQNARQARINAELACCDIEELTEEIRQSHCAFMRLISERSAFRL
Ga0208043_12012591	3300027570	Peatlands Soil	LRKGKAMVDLRTVELELHNARQARINAELACCDIEELAEEIRQSHHAFMRLMAEQRGLRL
Ga0209625_10638182	3300027635	Forest Soil	MVDHQAVEIELQNARQARINAELACCDIEELAEEIRQSHHAFMRLLSERRSFRLH
Ga0209388_10024625	3300027655	Vadose Zone Soil	MVDLQTVEIELQNARQARINAELACCDIEELAEEIRQTHHAFMRLLSERRSFRLH
Ga0209810_10300472	3300027773	Surface Soil	MVDFQTVETELQNARRARINAELACCDIEELAEEIRQSHHAFMRLIAERREFRLH
Ga0209180_100989442	3300027846	Vadose Zone Soil	MVDLQTVEIELQNARQARINAELACCDIEELAQEIRQSHHAFMRLISERRSFRLH
Ga0209283_108620011	3300027875	Vadose Zone Soil	MVDLQTVEIELKNARQARINAELACCDIEELAEEIRQSHHAFMRLISERRGFRLH
Ga0209068_100683322	3300027894	Watersheds	MVDLQAVEVELQNARQARINAELACCDIEELTEEIRQSHHAFLRLISERRSFRLH
Ga0209067_108522361	3300027898	Watersheds	MVDLQAVEIELLKARHARIKAELACYDIEELTEEIRQSHQAFMRSISGQRGVPLH
Ga0209415_1001875113	3300027905	Peatlands Soil	MVDLRTVELELHNARQARINAELACCDIEELAEEIRQSHHAFMRLMAEQRGLRLH
Ga0209583_100940352	3300027910	Watersheds	MVDLQAVEIELNNARKARINAELACCDIEELTEEIRQSHHAFMQLISERRGFRLH
Ga0209069_1000132112	3300027915	Watersheds	MVDLQAVEIELHNARRARIKAELACSDIEELTEEIRQSHHAFRRLVLEQCGIMRH
Ga0209069_100039293	3300027915	Watersheds	MVDLQAVEIELNNARKARINAELACCDIEELTEAIRQSHHAFMQLISERRGFRLH
Ga0318528_106889762	3300031561	Soil	MVDLRTVEIELHNARRARINAELACCDIEELTEEIRQSHHAFMRLISEQRSVRLH
Ga0307469_100148792	3300031720	Hardwood Forest Soil	MVDLQAVEIELQNARRARIDAELACCDIEELTEEIRQSHDAFLRGIAERRSLQLLH
Ga0306925_101861172	3300031890	Soil	MVDLQAVEIELQNARKARINAELACCDIEQLTEEIRQSHHAFMRLISERRGFRLH
Ga0310916_102626031	3300031942	Soil	MVDLHAVQIELQNARRARINAQLASCDIEELTDEIRRAHHAFMRRTAP
Ga0311301_100519674	3300032160	Peatlands Soil	MVDLRTVEIELHNARQARINAELACCDIEELAEEIRQSHHAFMRLMAEQRGLRLH
Ga0307471_1002290072	3300032180	Hardwood Forest Soil	MVDHQAVEIELHNARQARINAELACCDIEELTEEIRQSHHAFMRLISERRSFRLH
Ga0307471_1013036331	3300032180	Hardwood Forest Soil	QAVEIELQNARRARIDAELACCDIEELTEEIRQSHDAFLRGIAERRSLQLLH
Ga0307472_1013151381	3300032205	Hardwood Forest Soil	MVDHQAVEIELHNARQARINAELACCDIEELTEEIRQSHHAFMRLLSERRSFRLH
Ga0306920_1038690201	3300032261	Soil	MVDLHAVQIELQNARRARINAQLACCDIEELTDEIRRAHHAFMRRTAVRRGVGMR
Ga0335079_110519492	3300032783	Soil	MVDLQTVEIELQNARQARINAELACCDIEELAEEIRQSRHAFMRLISERREFRLH
Ga0314865_082666_236_403	3300033806	Peatland	MVNLQAVEIELQNARQARIDAELACCDIEELTEEIRQSHHAFMRLLSERRNFRLH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F042925

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences