NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F043072

Metagenome Family F043072

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F043072
Family Type Metagenome
Number of Sequences 157
Average Sequence Length 83 residues
Representative Sequence LDDAALLMSCAEAGLVLVAFDRATLPWHAGQVLRAGESHGGLILFRRTVRSTNYGDQARLVTDFWLSEGRAWDWTNRIVYLPKSP
Number of Associated Samples 130
Number of Associated Scaffolds 157

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 20.78 %
% of genes near scaffold ends (potentially truncated) 61.15 %
% of genes from short scaffolds (< 2000 bps) 86.62 %
Associated GOLD sequencing projects 122
AlphaFold2 3D model prediction Yes
3D model pTM-score0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (96.815 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(12.102 % of family members)
Environment Ontology (ENVO) Unclassified
(31.847 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(39.490 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 36.28%    β-sheet: 1.77%    Coil/Unstructured: 61.95%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 157 Family Scaffolds
PF01850PIN 1.91
PF05685Uma2 1.91
PF01261AP_endonuc_2 1.27
PF07494Reg_prop 1.27
PF00069Pkinase 1.27
PF05534HicB 1.27
PF08240ADH_N 1.27
PF01568Molydop_binding 1.27
PF00724Oxidored_FMN 1.27
PF12847Methyltransf_18 0.64
PF00196GerE 0.64
PF13561adh_short_C2 0.64
PF14833NAD_binding_11 0.64
PF13635DUF4143 0.64
PF03551PadR 0.64
PF04055Radical_SAM 0.64
PF07228SpoIIE 0.64
PF11578DUF3237 0.64
PF00155Aminotran_1_2 0.64
PF00440TetR_N 0.64
PF02276CytoC_RC 0.64
PF12796Ank_2 0.64
PF00486Trans_reg_C 0.64
PF00665rve 0.64
PF08818DUF1801 0.64
PF04480DUF559 0.64
PF00271Helicase_C 0.64
PF08327AHSA1 0.64
PF13784Fic_N 0.64
PF08031BBE 0.64
PF12543DUF3738 0.64
PF01011PQQ 0.64
PF01272GreA_GreB 0.64
PF08279HTH_11 0.64
PF13181TPR_8 0.64
PF01171ATP_bind_3 0.64
PF10387DUF2442 0.64
PF13649Methyltransf_25 0.64
PF02518HATPase_c 0.64
PF01934HepT-like 0.64
PF01068DNA_ligase_A_M 0.64
PF01527HTH_Tnp_1 0.64

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 157 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 5.10
COG4636Endonuclease, Uma2 family (restriction endonuclease fold)General function prediction only [R] 1.91
COG1598Antitoxin component HicB of the HicAB toxin-antitoxin systemDefense mechanisms [V] 1.27
COG19022,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) familyEnergy production and conversion [C] 1.27
COG3292Periplasmic ligand-binding sensor domainSignal transduction mechanisms [T] 1.27
COG4226Predicted nuclease of the RNAse H fold, HicB familyGeneral function prediction only [R] 1.27
COG0042tRNA-dihydrouridine synthaseTranslation, ribosomal structure and biogenesis [J] 1.27
COG0519GMP synthase, PP-ATPase domain/subunitNucleotide transport and metabolism [F] 0.64
COG06037-cyano-7-deazaguanine synthase (queuosine biosynthesis)Translation, ribosomal structure and biogenesis [J] 0.64
COG0782Transcription elongation factor, GreA/GreB familyTranscription [K] 0.64
COG1423ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) familyReplication, recombination and repair [L] 0.64
COG1606ATP-utilizing enzyme, PP-loop superfamilyGeneral function prediction only [R] 0.64
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 0.64
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 0.64
COG1793ATP-dependent DNA ligaseReplication, recombination and repair [L] 0.64
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 0.64
COG2361HEPN domain protein, predicted toxin of MNT-HEPN systemDefense mechanisms [V] 0.64
COG2445Uncharacterized HEPN domain protein YutE, UPF0331/DUF86 familyGeneral function prediction only [R] 0.64
COG2801Transposase InsO and inactivated derivativesMobilome: prophages, transposons [X] 0.64
COG2826Transposase and inactivated derivatives, IS30 familyMobilome: prophages, transposons [X] 0.64
COG3316Transposase (or an inactivated derivative), DDE domainMobilome: prophages, transposons [X] 0.64
COG4430Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 familyFunction unknown [S] 0.64
COG4584TransposaseMobilome: prophages, transposons [X] 0.64
COG5646Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)Posttranslational modification, protein turnover, chaperones [O] 0.64
COG5649Uncharacterized conserved protein, DUF1801 domainFunction unknown [S] 0.64
COG0037tRNA(Ile)-lysidine synthase TilS/MesJTranslation, ribosomal structure and biogenesis [J] 0.64
COG0277FAD/FMN-containing lactate dehydrogenase/glycolate oxidaseEnergy production and conversion [C] 0.64
COG0301Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)Translation, ribosomal structure and biogenesis [J] 0.64
COG0482tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domainTranslation, ribosomal structure and biogenesis [J] 0.64


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms96.82 %
UnclassifiedrootN/A3.18 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000789|JGI1027J11758_12640602All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium756Open in IMG/M
3300000891|JGI10214J12806_10088896All Organisms → cellular organisms → Bacteria1093Open in IMG/M
3300000955|JGI1027J12803_101393349All Organisms → cellular organisms → Bacteria1360Open in IMG/M
3300002122|C687J26623_10159477All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales623Open in IMG/M
3300002122|C687J26623_10243011All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300002124|C687J26631_10047739All Organisms → cellular organisms → Bacteria1496Open in IMG/M
3300002124|C687J26631_10152262All Organisms → cellular organisms → Bacteria775Open in IMG/M
3300004157|Ga0062590_100943480All Organisms → cellular organisms → Bacteria813Open in IMG/M
3300004463|Ga0063356_102385341All Organisms → cellular organisms → Bacteria809Open in IMG/M
3300004463|Ga0063356_103831147All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300004643|Ga0062591_101888475All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium612Open in IMG/M
3300005171|Ga0066677_10034195All Organisms → cellular organisms → Bacteria2456Open in IMG/M
3300005175|Ga0066673_10805791All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300005180|Ga0066685_10660631All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya → unclassified Leptolyngbya → Leptolyngbya sp. Heron Island J719Open in IMG/M
3300005181|Ga0066678_10220589All Organisms → cellular organisms → Bacteria → Proteobacteria1217Open in IMG/M
3300005184|Ga0066671_10050648All Organisms → cellular organisms → Bacteria2097Open in IMG/M
3300005187|Ga0066675_10019113All Organisms → cellular organisms → Bacteria3831Open in IMG/M
3300005295|Ga0065707_10820778All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300005332|Ga0066388_100247318All Organisms → cellular organisms → Bacteria2421Open in IMG/M
3300005332|Ga0066388_108782848All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300005353|Ga0070669_100196734All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1584Open in IMG/M
3300005364|Ga0070673_101347680All Organisms → cellular organisms → Bacteria671Open in IMG/M
3300005434|Ga0070709_10090995All Organisms → cellular organisms → Bacteria2012Open in IMG/M
3300005441|Ga0070700_100384741All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1050Open in IMG/M
3300005444|Ga0070694_101292561All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300005446|Ga0066686_10874484All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300005456|Ga0070678_100291253All Organisms → cellular organisms → Bacteria1384Open in IMG/M
3300005466|Ga0070685_10872647All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14668Open in IMG/M
3300005471|Ga0070698_101756689All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300005552|Ga0066701_10202916All Organisms → cellular organisms → Bacteria1216Open in IMG/M
3300005559|Ga0066700_10447428All Organisms → cellular organisms → Bacteria907Open in IMG/M
3300005566|Ga0066693_10079347All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1152Open in IMG/M
3300005568|Ga0066703_10632567All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya → unclassified Leptolyngbya → Leptolyngbya sp. Heron Island J620Open in IMG/M
3300005568|Ga0066703_10823462All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300005713|Ga0066905_100259207All Organisms → cellular organisms → Bacteria1341Open in IMG/M
3300006169|Ga0082029_1038856All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300006169|Ga0082029_1380533All Organisms → cellular organisms → Bacteria780Open in IMG/M
3300006176|Ga0070765_100545258All Organisms → cellular organisms → Bacteria1092Open in IMG/M
3300006844|Ga0075428_102552025All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300006845|Ga0075421_100331522All Organisms → cellular organisms → Bacteria1842Open in IMG/M
3300006845|Ga0075421_100838740All Organisms → cellular organisms → Bacteria1054Open in IMG/M
3300006847|Ga0075431_101026570All Organisms → cellular organisms → Bacteria791Open in IMG/M
3300006847|Ga0075431_101359284All Organisms → cellular organisms → Bacteria670Open in IMG/M
3300006853|Ga0075420_101234052All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300006871|Ga0075434_100644420All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1078Open in IMG/M
3300006876|Ga0079217_11027773All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300006903|Ga0075426_10224329All Organisms → cellular organisms → Bacteria1365Open in IMG/M
3300006914|Ga0075436_100488379All Organisms → cellular organisms → Bacteria900Open in IMG/M
3300007004|Ga0079218_10702133All Organisms → cellular organisms → Bacteria949Open in IMG/M
3300009012|Ga0066710_103677404All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300009053|Ga0105095_10827747All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300009094|Ga0111539_10395264All Organisms → cellular organisms → Bacteria1610Open in IMG/M
3300009100|Ga0075418_11990144All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300009101|Ga0105247_10025247All Organisms → cellular organisms → Bacteria3585Open in IMG/M
3300009147|Ga0114129_10839582All Organisms → cellular organisms → Bacteria1169Open in IMG/M
3300009156|Ga0111538_10575867All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1427Open in IMG/M
3300009156|Ga0111538_10711110All Organisms → cellular organisms → Bacteria1273Open in IMG/M
3300009156|Ga0111538_14007863All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300009691|Ga0114944_1046259All Organisms → cellular organisms → Bacteria1584Open in IMG/M
3300009804|Ga0105063_1042046All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300010038|Ga0126315_10791191All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300010043|Ga0126380_12175296All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300010047|Ga0126382_10187150All Organisms → cellular organisms → Bacteria1459Open in IMG/M
3300010362|Ga0126377_11478651All Organisms → cellular organisms → Bacteria → Acidobacteria753Open in IMG/M
3300010373|Ga0134128_11839220All Organisms → cellular organisms → Bacteria666Open in IMG/M
3300011270|Ga0137391_10816817All Organisms → cellular organisms → Bacteria767Open in IMG/M
3300011432|Ga0137428_1177635All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300011432|Ga0137428_1183778All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300011445|Ga0137427_10213526All Organisms → cellular organisms → Bacteria804Open in IMG/M
3300012022|Ga0120191_10040310All Organisms → cellular organisms → Bacteria771Open in IMG/M
3300012034|Ga0137453_1123538All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300012045|Ga0136623_10120194All Organisms → cellular organisms → Bacteria1142Open in IMG/M
3300012189|Ga0137388_10704146All Organisms → cellular organisms → Bacteria → Acidobacteria938Open in IMG/M
3300012189|Ga0137388_11381092All Organisms → cellular organisms → Bacteria643Open in IMG/M
3300012203|Ga0137399_10038543All Organisms → cellular organisms → Bacteria3372Open in IMG/M
3300012212|Ga0150985_117355423All Organisms → cellular organisms → Bacteria718Open in IMG/M
3300012354|Ga0137366_11020115All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300012354|Ga0137366_11034067All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300012358|Ga0137368_10210251All Organisms → cellular organisms → Bacteria1376Open in IMG/M
3300012359|Ga0137385_10490458All Organisms → cellular organisms → Bacteria1040Open in IMG/M
3300012469|Ga0150984_112423592All Organisms → cellular organisms → Bacteria981Open in IMG/M
3300012469|Ga0150984_120482986All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300012469|Ga0150984_120839311All Organisms → cellular organisms → Bacteria1342Open in IMG/M
3300012683|Ga0137398_10816848All Organisms → cellular organisms → Bacteria652Open in IMG/M
3300012685|Ga0137397_10401935All Organisms → cellular organisms → Bacteria1020Open in IMG/M
3300012685|Ga0137397_11087668All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300012922|Ga0137394_11110804All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300012948|Ga0126375_10470115All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium929Open in IMG/M
3300013096|Ga0157307_1167694All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300013308|Ga0157375_11213832All Organisms → cellular organisms → Bacteria885Open in IMG/M
3300013308|Ga0157375_12992717All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300014267|Ga0075313_1072423All Organisms → cellular organisms → Bacteria827Open in IMG/M
3300014268|Ga0075309_1081801All Organisms → cellular organisms → Bacteria769Open in IMG/M
3300014271|Ga0075326_1299513All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300015358|Ga0134089_10480869All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300015372|Ga0132256_102181979All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300015372|Ga0132256_103304229All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300015374|Ga0132255_100307834All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus2282Open in IMG/M
3300015374|Ga0132255_104566280All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300016294|Ga0182041_10616258All Organisms → cellular organisms → Bacteria955Open in IMG/M
3300016341|Ga0182035_10109593All Organisms → cellular organisms → Bacteria → Acidobacteria2042Open in IMG/M
3300018051|Ga0184620_10148693All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300018075|Ga0184632_10080780All Organisms → cellular organisms → Bacteria1419Open in IMG/M
3300018076|Ga0184609_10437436All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300018422|Ga0190265_10930469All Organisms → cellular organisms → Bacteria991Open in IMG/M
3300018429|Ga0190272_12071306All Organisms → cellular organisms → Bacteria605Open in IMG/M
3300018433|Ga0066667_11357722All Organisms → cellular organisms → Bacteria623Open in IMG/M
3300018469|Ga0190270_10023680All Organisms → cellular organisms → Bacteria3856Open in IMG/M
3300019487|Ga0187893_10054377All Organisms → cellular organisms → Bacteria4004Open in IMG/M
3300019487|Ga0187893_10354817All Organisms → cellular organisms → Bacteria1014Open in IMG/M
3300019890|Ga0193728_1129887All Organisms → cellular organisms → Bacteria1131Open in IMG/M
3300020581|Ga0210399_11511124All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300021479|Ga0210410_10332834All Organisms → cellular organisms → Bacteria1362Open in IMG/M
(restricted) 3300023208|Ga0233424_10389294All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300025155|Ga0209320_10382785All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300025157|Ga0209399_10024828All Organisms → cellular organisms → Bacteria2498Open in IMG/M
3300025159|Ga0209619_10496024All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300025160|Ga0209109_10086673All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira1625Open in IMG/M
3300025160|Ga0209109_10164777All Organisms → cellular organisms → Bacteria1108Open in IMG/M
3300025165|Ga0209108_10172167All Organisms → cellular organisms → Bacteria1131Open in IMG/M
3300025165|Ga0209108_10446075Not Available628Open in IMG/M
3300025319|Ga0209520_10800771All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300025324|Ga0209640_10184156All Organisms → cellular organisms → Bacteria1779Open in IMG/M
3300025325|Ga0209341_10525174All Organisms → cellular organisms → Bacteria940Open in IMG/M
3300025900|Ga0207710_10020135All Organisms → cellular organisms → Bacteria2850Open in IMG/M
3300025906|Ga0207699_10034789All Organisms → cellular organisms → Bacteria2861Open in IMG/M
3300026547|Ga0209156_10002781All Organisms → cellular organisms → Bacteria13561Open in IMG/M
3300027639|Ga0209387_1007550All Organisms → cellular organisms → Bacteria1881Open in IMG/M
3300027835|Ga0209515_10048056All Organisms → cellular organisms → Bacteria → Acidobacteria3331Open in IMG/M
3300027876|Ga0209974_10007521All Organisms → cellular organisms → Bacteria → Acidobacteria3749Open in IMG/M
3300027886|Ga0209486_10454487Not Available787Open in IMG/M
3300027907|Ga0207428_10369943All Organisms → cellular organisms → Bacteria → Acidobacteria1053Open in IMG/M
3300027909|Ga0209382_10517715All Organisms → cellular organisms → Bacteria1311Open in IMG/M
3300027909|Ga0209382_11243974All Organisms → cellular organisms → Bacteria758Open in IMG/M
3300027909|Ga0209382_12002707All Organisms → cellular organisms → Bacteria555Open in IMG/M
3300028047|Ga0209526_10054683All Organisms → cellular organisms → Bacteria2810Open in IMG/M
3300028047|Ga0209526_10992519All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300030006|Ga0299907_10378876All Organisms → cellular organisms → Bacteria1140Open in IMG/M
3300031229|Ga0299913_10497568All Organisms → cellular organisms → Bacteria1205Open in IMG/M
3300031229|Ga0299913_11291287All Organisms → cellular organisms → Bacteria687Open in IMG/M
3300031782|Ga0318552_10477398All Organisms → cellular organisms → Bacteria636Open in IMG/M
3300031834|Ga0315290_11195798All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300031903|Ga0307407_11050381All Organisms → cellular organisms → Bacteria → Acidobacteria631Open in IMG/M
3300031943|Ga0310885_10143357All Organisms → cellular organisms → Bacteria1135Open in IMG/M
3300031949|Ga0214473_10644863All Organisms → cellular organisms → Bacteria1162Open in IMG/M
3300031954|Ga0306926_11663161All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300031965|Ga0326597_10316375All Organisms → cellular organisms → Bacteria1769Open in IMG/M
3300032076|Ga0306924_12352374All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300032180|Ga0307471_101075244All Organisms → cellular organisms → Bacteria971Open in IMG/M
3300032275|Ga0315270_10638845All Organisms → cellular organisms → Bacteria694Open in IMG/M
3300033289|Ga0310914_11107304All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300033407|Ga0214472_11545917All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300034148|Ga0364927_0128774All Organisms → cellular organisms → Bacteria → Acidobacteria718Open in IMG/M
3300034354|Ga0364943_0145526All Organisms → cellular organisms → Bacteria852Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere12.10%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil9.55%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil8.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.46%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.46%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil3.82%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.18%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil2.55%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.55%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.55%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.55%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.55%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil2.55%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.91%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands1.91%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.91%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.91%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere1.91%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment1.27%
Thermal SpringsEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs1.27%
Termite NestEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest1.27%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.27%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.27%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.27%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.27%
Microbial Mat On RocksEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks1.27%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.27%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.27%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.27%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.27%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.27%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.27%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.64%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.64%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater0.64%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand0.64%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.64%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.64%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.64%
TerrestrialEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial0.64%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.64%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.64%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.64%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.64%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.64%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.64%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.64%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.64%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.64%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000789Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300002122Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_2EnvironmentalOpen in IMG/M
3300002124Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_3EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300006169Termite nest microbial communities from Madurai, IndiaEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009053Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009691Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2EnvironmentalOpen in IMG/M
3300009804Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011432Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2EnvironmentalOpen in IMG/M
3300011445Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2EnvironmentalOpen in IMG/M
3300012022Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6EnvironmentalOpen in IMG/M
3300012034Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT526_2EnvironmentalOpen in IMG/M
3300012045Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)EnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300013096Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2EnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014267Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1EnvironmentalOpen in IMG/M
3300014268Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1EnvironmentalOpen in IMG/M
3300014271Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2EnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300019487White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaGEnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300023208 (restricted)Freshwater microbial communities from Lake Towuti, South Sulawesi, Indonesia - Watercolumn_Towuti2014_125_MGEnvironmentalOpen in IMG/M
3300025155Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 4EnvironmentalOpen in IMG/M
3300025157Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3 (SPAdes)EnvironmentalOpen in IMG/M
3300025159Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 3EnvironmentalOpen in IMG/M
3300025160Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2EnvironmentalOpen in IMG/M
3300025165Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1EnvironmentalOpen in IMG/M
3300025319Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1EnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025325Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)EnvironmentalOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300027639Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)EnvironmentalOpen in IMG/M
3300027835Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m (SPAdes)EnvironmentalOpen in IMG/M
3300027876Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300030006Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67EnvironmentalOpen in IMG/M
3300031229Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38EnvironmentalOpen in IMG/M
3300031782Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20EnvironmentalOpen in IMG/M
3300031834Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0EnvironmentalOpen in IMG/M
3300031903Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1Host-AssociatedOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300031949Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300031965Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032275Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottomEnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M
3300033407Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175EnvironmentalOpen in IMG/M
3300034148Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17EnvironmentalOpen in IMG/M
3300034354Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI1027J11758_1264060223300000789SoilVAEGSLTSLVAFDRATLPWQADQVLRLGESHCGLILFRRTVRSTNYGDQARLXTDFWFXXGRGWDWMNRIVYLRKSP*
JGI10214J12806_1008889623300000891SoilMSCAEAGLVLVAFDRATLPWHAGQVLRAGQNHGGLVLFRRTVRSTDYGHHQARLLTEFWADEGRAWDWLNRVVYLPKATSAS*
JGI1027J12803_10139334933300000955SoilVAEGSLTSLVAFDRATLPWQADQVLRLGESHCGLILFRRTVRSTNYGDQARLMTDFWFGTGRGWDWMNRIVYLRKSP*
C687J26623_1015947723300002122SoilLVLVAFDRATLPWHAGQLLRAGRNHGGLVLFRRSVRGTGYGHQARLLTEFWADAGEGWDWLNRIVYLPKSA
C687J26623_1024301113300002122SoilALLLSCAEAGLVLVAFDRATLPWHAGQVLRAGHNHGGLVLFRRTVRSTDYGHQARLLTDFWDREGHLWGWLNRVVYLPTATSAA*
C687J26631_1004773913300002124SoilIASWQDGLWLGLDDAALLLSCAEAGLVLVAFDRATLPWHAGQVLRAGHNHGGLVLFRRTVRSTDYGHQARLLTDFWDREGHLWGWLNRVVYLPTATSAA*
C687J26631_1015226213300002124SoilPIVHIANWQDGVWLGLDDAALLISSAQAGLVLVAFDRATLPWHAGQVLRAGENHAGLVLFRRTVRSTAYGDQAQLLTDFWAHEGQTWEWVNRIIYLPKSP*
Ga0062590_10094348023300004157SoilWLGLDDAALLISCAEADLVLVAFDRATLAWHAGQLLRAGHDHCGLILFRRTVRSTDYGQQARLLTRFWIEEGSAWDWRNRIVYLPKSP*
Ga0063356_10238534113300004463Arabidopsis Thaliana RhizosphereLGLDDAALLMSCAEAALVLVAFDRATLPWHAGQVLRAGESHGGLILFRRTVRTTNYGEQARLLTEFWYTQGHDWDWTNRIVYLPKSPAFALTRYGGAGSGSR*
Ga0063356_10383114713300004463Arabidopsis Thaliana RhizosphereATLPWHAGQVLRAGENHGGLVLFRRSIRSTHYGAQARLLTSFWADEGQAWEWSNHIVYLPKTP*
Ga0062591_10188847523300004643SoilDRATLPWHAGQVLRAGHDHGGLMLFRRTVRSIDYGDQARLLTDFWLQEGSAWDWLNRIVYLPKSPSA*
Ga0066677_1003419533300005171SoilMSCAEAGLVLVAFDRATLPWHAGQVLRAGESHGGLILFRRTVRSTNYGDQARLVTDFWFGEGRGWDWTNRIVYLPKSP*
Ga0066673_1080579123300005175SoilLILVAFDRATLAWHCGQMNRAGHDHAGVILFRGSVRSSDYGYQARLLTTFWREEGRHWDWPNRVVYLPKSV*
Ga0066685_1066063113300005180SoilGSWLGLDDAALLISCAEAGLVLVAFDRATLPWHAGQVVRAGESHGGLILFRRTVRSTNYGEQARLVSEFWSSQGQGWDWTNRIVYLPKSP*
Ga0066678_1022058913300005181SoilSWLGLDDAALLISCAEAGLVLAAFDRATLPWHAGQVLRAGEHHGGLILFRRTVRSTNYGEQARLLTEFWFNEGCAWDWTNRIVYLPKSP*
Ga0066671_1005064833300005184SoilVLVAFDRRTLPWHAGQVLRTGESHGGLILFRRTIRTTNYGHQARLLTEFWADEGQDWDWLGRIVYLPNSP*
Ga0066675_1001911343300005187SoilLISCAEAGLVLVAFDRATLPWHAGQVVRAGESHGGLILFRRTVRSTNYGEQARLVSEFWSSQGQGWDWTNRIVYLPKSP*
Ga0065707_1082077813300005295Switchgrass RhizosphereLVLVAFDRATLPWHAGQVVRAGESHGGLILFRRSVRSTDSGDQARLMTEFRLREGRGWDWTNRVVYLPKSP*
Ga0066388_10024731833300005332Tropical Forest SoilMSCAEAGLVLVAFDRATLPWHAGQVLRAGEDHGGLILFRRTVRTTNYGEQARLLTEFWSEDGHAWDWVNRIVYLPKSL*
Ga0066388_10878284813300005332Tropical Forest SoilPWHAGQVLRAGESHGGLVLFRRSVRSTDYGYQARLLTGVWTDEGEQWDWSNRIIYLPKSPDAKARRVR*
Ga0070669_10019673423300005353Switchgrass RhizosphereVVHIARWQEGSWLGLDDTALLIACAEASLVLVAFDRATLPWHAGQALRAGNDHGGLILFRRAVRSTDYGVQARLVTELWVNDGRTWDWTNRIVYLPKSPADAERQ*
Ga0070673_10134768013300005364Switchgrass RhizosphereVHIATWQGGSWLGLDDAALLISCAEAGLVLVAFDRATLPWHAGQVLREGEDHGGLVVFRRSVRSTDYCSQARLLTGFWTDEGQKWEWLNRIVYLPNTR*
Ga0070709_1009099523300005434Corn, Switchgrass And Miscanthus RhizosphereVLRDFPIAHIARWKDGSWRGLDDATLLISCAEAGLVLVAFDRATLPWHAGQVVRAGESHGGLILFRRIVRSTNYGEQARLLTGFWFNEGRAWDWMNRIVYLPKSP*
Ga0070700_10038474113300005441Corn, Switchgrass And Miscanthus RhizosphereMLFERGGVISRFLDHIADWQGGSWLGLDDPALLLACVEANLMLAALDRATLPWHAGQLLRAGHEHAGLILFRGSVRTTDYGYQARLLTGFWAQEGG
Ga0070694_10129256113300005444Corn, Switchgrass And Miscanthus RhizosphereTLPWHAGQVLRAGENHGGLVLFRRTLRSTACGDQARLLTDFWVHEGHAWDWVNRIVYLPKSP*
Ga0066686_1087448423300005446SoilLLHGFPIVHIASWEDGLWLGLDDAALLIACAEAGLVLVAFDRATLPWHAGQVLRAGESHGGLILFRRSVRTTNYGQQARLLTEFWSHEGHAWDWLN
Ga0070678_10029125323300005456Miscanthus RhizosphereVHIATWQGGSWLGLDDAALLISCAEAGLVLVAFDRATLPWHAGQVLREGENHGGLVVFRRSVRSTDYGSQARLLTGFWTDEGQKWEWLNHIVYRPKTR*
Ga0070685_1087264713300005466Switchgrass RhizosphereLVACDRATLPWHAAQIVRAGDVHGGLILVRRRVRSTDYGQQARLLTRFWLDGAFRWDWENRVVYLPKSL*
Ga0070698_10175668913300005471Corn, Switchgrass And Miscanthus RhizosphereVLVAFDRATLPWHAGQVLRAGENHGGLVLFRRAVRTTDYGDQARLLTGFWADEGHSWDRLNRIVYLPKSP*
Ga0066701_1020291623300005552SoilMSCAEAGLVLVAFDRATLPWHAGQVLRAGESHGGLILFRRTGRSTNYGDQARLLTEFWSNQGRAWDWMNRIVYLPKSP*
Ga0066700_1044742813300005559SoilCAEAGLVLVAFDRRTLPWHAGQVLRTGETHGGLILFRRTVRTTNYGQQARLLTEFWAGEGQAWDWLGRIVYLPKSP*
Ga0066693_1007934723300005566SoilSLVLVAFDRATLAWHAGQLLRGGRDHAGLILFRGSVRSLDYGCQARLLTGFWQDEASTWDWLNRVVYIPKSP*
Ga0066703_1063256713300005568SoilPIVHIARWQDGSWLGLDDAALLISCAEAGLVLVAFDRATLPWHAGQVVRAGESHGGLILFRRTVRSTNYGEQARLVSEFWSSQGQGWDWTNRIVYLPKSP*
Ga0066703_1082346213300005568SoilGLDDAALLMSCAEAGLVLVAFDRATLPWHAGQVLRAGESHGGLILFRRTVRSTNYGDQARLVTDFWFGEGRGWDWTNRIVYLPKSP*
Ga0066905_10025920743300005713Tropical Forest SoilMFVMIRVTFRDAPSNLVMSCAEAGLVLVAFDRATLPWHAGQVLRAGGSHGGLILFRRPVRSTNDRERAHVLTEFWFHEGRAWDWKNRIVYLPKSP*
Ga0082029_103885613300006169Termite NestAALLISCAEAGLVLVAFDRATLPWHAGQVVRAGEDHGGLILFRRGVRSTDYGNQARLVTDFWFGDGRGWAWTNRIVYLPKAP*
Ga0082029_138053323300006169Termite NestLDDAALLISCAEAGLVLVAFDRATLPWHAGQVVRAGESHGGLILFRRSVRSTDYGDQARLVTDVWLREARGWDWTNRIVYLPKSP*
Ga0070765_10054525813300006176SoilIACAEFGLVLVAFDRATLPWHAGQVIRSGESHGGLILFRRTVRSTNYGEQARLLTEFWAHEGHAWDWLNRFVYLPKSP*
Ga0075428_10255202513300006844Populus RhizosphereQDGSWLGLDDAALLIACAEAGLVLVAFDRATLAWHAGQVLRAGDSHGGLVLFRRSVRTTNYGEQARLLTKFWSEDGHAWDWLNRIVYLPKSP*
Ga0075421_10033152243300006845Populus RhizosphereVIHIARWQDGSWLGLDDAALLISCAEAGLVLVAFDRATLPWHAGQVVRAGESHGGLILFRRSVRSTDYGDQARLVTEFWLREGRGWDWTNRVVYLPTRK*
Ga0075421_10083874023300006845Populus RhizosphereLGLRAPAPWISHRAHRAVAGRLLLGQDDAALLISCADAGLVLVAFDRATLPWHAGQVLRAGESHGGLILFRRTVRTTNDGEQARLLTEFWSREGHAWDWANRIVYLPTSP*
Ga0075431_10102657013300006847Populus RhizosphereHIARWQDASWLGLDDAALLISCAEVGLVLVAFDRATLPWHAGQVLRAGDSHGGLILFRRTVRSTNYGEQARLLTEFWFKEGHAWDWMNRIVYLPKSP*
Ga0075431_10135928413300006847Populus RhizosphereIHIARWQDGSWLGLDDAALLISCAEAGLVLVAFDRATLPWHAGQVVRAGESHGGLILFRRSVRSTDYGDQARLVTEFWLREGRGWDWTNRVVYLPTRK*
Ga0075420_10123405223300006853Populus RhizosphereGLVLVAFDRATLPWHAGQVLRAGDSHGGLILFRRTVRSTNYGEQARLLTEVWFKEGHAWDWMNRIVYLPKSP*
Ga0075434_10064442013300006871Populus RhizosphereCAEADLVLVAFDRAALAWHAGQLLRAGHDHCGLILFRRTVRSTDYGQQARLLTRFWIEEGGAWDWRNRIVYLPKSP*
Ga0079217_1102777313300006876Agricultural SoilLRRGVPIVHIARWQDGSWLGLDDAALLISCAEASLVLVAFDRATLPWHAGQVVRAGEDHGGLILFRRSVRSTDYGDQGRLVTNFWVREGQGSEWTNRIVYLPKSP*
Ga0075426_1022432933300006903Populus RhizosphereVLVAFDRATLPWHAGQVLRAGESHGGLILFRRTVRTTNYGEQARLLTEFCSEDAHAWDWLNRIVYLPNGVDPGFGGYLTQF*
Ga0075436_10048837923300006914Populus RhizosphereMSCAEAGLVLVAFDRATLPWHAGQVLRAGESHGGLILFRRTVRTTNYGEQARLLTEFCSEDAHAWDWLNRIVYLPNGVDPGFGGYLTQF*
Ga0079218_1070213313300007004Agricultural SoilHRVLVAFDRATLAWHAGQLIRTGHEHGGLTLFRRSVRSTGYGKQARLLVSFWDEAEAWDWINRIAYLPKAA*
Ga0066710_10367740423300009012Grasslands SoilVAFDRATLPWHAGQVLRVGESHGGLILFRRTVRTTNYGEQARLLTEFWSQDGHTWDWLNRIVYLPKSP
Ga0105095_1082774723300009053Freshwater SedimentLDDAALLISCAEAGLVLVAFDRATLPWHAGQVVRAGESHGGLILFRRSVRSTNYGDQARLVTDFWLREARGWDWTNRIVYLPKSP*
Ga0111539_1039526413300009094Populus RhizosphereMSCAEAGLVLVAFDRATLPWHAGQVLRAGQNHGGLVLFRRTVRSTDYGHQARLLTEFWADEGHAWDWLNRVVYLPKSTSMS*
Ga0075418_1199014413300009100Populus RhizosphereLDDAALLISCAEAGLVLVAFDRATLPWHAGQVVRAGESHGGLILFRRTVRSTDYGDQARLVTDFWLREARGWDWTNRIVYLPKSP*
Ga0105247_1002524723300009101Switchgrass RhizosphereMDDATLLMSCAEADLVLVAFDRATLPWHAGQVVRAGEDYGGLILFRRGVRSTDYGNQARLVTDFWFREAHGWDWTNRIVYLPKAP*
Ga0114129_1083958213300009147Populus RhizosphereLDDAALLLSCGEAGLVLVAFDRATLPWHAGQVLRAGGSHGGLILFRRRVRSTNYGEQARLLTEFWFNDGRAWDWMNRIVYLPK
Ga0111538_1057586723300009156Populus RhizosphereLDDAALLISCAEAGLVLVAFDRATLPWHAGQVVRAGESHGGLILFRRSVRSTDYGDQARLVTDFWLREARGWDWTNRIVYLPKSP*
Ga0111538_1071111023300009156Populus RhizosphereALLIACAETGLVLVAFDRATLPWHAGQVLRAGDSHGGLILFRRSVRTTNYGEQARLLTEFWSEDGHAWDWLNRIVYLPKSP*
Ga0111538_1400786313300009156Populus RhizosphereLTLVAFDRATLPWHAGQVLRAGENHGGLILFRRTVRTTNYGEQARLLTEFWSQDGHTWDWLNRIVYLPKSP*
Ga0114944_104625923300009691Thermal SpringsLGLDDAALLMASAEAGLVLVAFDRATLPWHAGQVLRAGESHGGLILFRRTVRATNYGQQARLLTDFWAHEGHNWDWVDRIVYLPKSP*
Ga0105063_104204613300009804Groundwater SandLDDAALLMSCAEAGLVLVAFDRATLPWHAGQVLRAGESHGGLILFRRTVRSTNYGDQARLVTDFWLSEGRAWDWTNRIVYLPKSP*
Ga0126315_1079119123300010038Serpentine SoilLDDAALSISCAEAGLVLVAFDRATLPWHAGQVVRAGESHGGLILFRRSVRSTDYGDQARLVIDFWLREGRGWDWTNRIV
Ga0126380_1217529623300010043Tropical Forest SoilVAFDRATLPWHAGQVVRAGDDYAGLILFRRAVRSTNYGQQAQLLTQFWTDEGQTWDWRNRIVYLPKTP*
Ga0126382_1018715013300010047Tropical Forest SoilRMFVMIRVTFRDAPSNLVMSCAEAGLVLVAFDRATLPWHAGQVLRAGGSHGGLILFRRPVRSTNDRERAHVLTEFWFHEGRAWDWKNRIVYLPKSP*
Ga0126377_1147865113300010362Tropical Forest SoilLALVVFDRATLPWHAGPVLRAGDSHGGLFLFRRTVRSTNYGEQARLLTEFWFNEGHAWDWMNRIVYLPKSP*
Ga0134128_1183922023300010373Terrestrial SoilISCAEAGLVLVAFDRATLPWHAGQVVRAGESHGGLILFRRIVRSTNYGEQARLLIGFWFNEGRAWDWMNRIVYLPKSP*
Ga0137391_1081681723300011270Vadose Zone SoilIARWRDGSWLGLDDAALLIACAEAGLVLVAFDRATLPWHAGQVIRSGESHGGLILFRRTVRTTNYGQQARLLTEFWAHEGQPWDWLNRIVYLPKSP*
Ga0137428_117763513300011432SoilMSCAEAGLVLVAFDRATLPWHAGQVLRAGQNHGGLVIFRRTVRGTDYGHQARLLTEFWADEGRAWDWLNRVVYLPKAT
Ga0137428_118377813300011432SoilIVHLADWQDRSWLGLDDAALLMSCAEAGLVLVAFDRATLPRHAGQVLRAGQNHGGLVLFRRTVRSIDYGHQARLLTDFWADEGHAWDWLNRIVYLPKAISAS*
Ga0137427_1021352623300011445SoilMSCAEAGLVLVAFDRATLPWHAGQLLRAGQNHGGLVLFRRTDRSIDYGHQARLLTDFWADEGHAWDWLNRVVYLPKSTSAS*
Ga0120191_1004031013300012022TerrestrialLISCAEASLVLVAFDRATLPWHAGQVVRAGESHGGLILFRRSVRSTDYGDQARLLTDFWLREGRGWDWTNRIVYLPKSP*
Ga0137453_112353813300012034SoilRATLPWHAGQVVRAGADHGGLVLFRRTVRSAAYGDQARLLTDLWAQEGQAWEWVNRIIYLPKSP*
Ga0136623_1012019443300012045Polar Desert SandGLDDAALLMSCADAGLTLVAFDRATLPWHAGQVLRGGENHGGLVLFRRAVRTTDYGHQARLLTDLWAEGHGWDWLNRIVYLPRAV*
Ga0137388_1070414613300012189Vadose Zone SoilGLWLGLDDAALLIACAEAGLVLVAFDRATLPWHAGQVLRAGESHGGLILFRRSVRTTNYGQQARLLTEFWSHEGHAWAWLNRIVYLPKSP*
Ga0137388_1138109223300012189Vadose Zone SoilAALLISCAHAGRGLVAFDRATLPWHAGQVLRAGENHGGLVLFRRTVRSTAYGNQARLLTDFWVHEGHTWDWVNRIVYLPKSP*
Ga0137363_1072594523300012202Vadose Zone SoilVLDDAALLTGCAEAALVLVAFDRSTLGWHAGQLIRAGQDHAGLILFRGTVRSPDYGYQSRLLTVFWQNQGGLWDWPNRMVYLPRSL*
Ga0137399_1003854343300012203Vadose Zone SoilWQDGSWLGLDDAALLISCAQAGLVLIAFDRATLPWHAGQVLRAGENHGGLVLFRRTVRSTAYGDQTRLLTDFWVHEGHARDWVNRIVYLPKSP*
Ga0150985_11735542323300012212Avena Fatua RhizosphereMSCAEASLVLVAFDRATLPWHAGQLLRAGESHGGLILFRRTVRSTNYGEQARLLTEFWFNEGRAWDWMNRIVYLPKS
Ga0137366_1102011533300012354Vadose Zone SoilFDRSTLAWHAGQLLRAGHDIAGLILFRGMVRSSDYGHQARLLTEFWEREGGAWDWENRIVYLPKSP*
Ga0137366_1103406723300012354Vadose Zone SoilVHIAAWQDGSWLGLDDSALLIACAELGLVVVAFDRATLPWHAGQVLRAGESHGGLVLFRRTVRSTDYGHQARLLTGFWADEGHSWDWRNRIVYLPKSP*
Ga0137368_1021025133300012358Vadose Zone SoilATLPWHAGQVLRSGESHGGLILFRRTVRTTNYGQQTRLLKDFWGQEGHAWDWLNRIVYLPKSP*
Ga0137385_1049045833300012359Vadose Zone SoilSWLSLDDAALLAACAEAGLVLVGFDRATLPWHAGQLLRGGHDHRGLILFRRTVRGTDYGQQARLLTGFWAQEGSTWDWLNRIVYLPKSP*
Ga0150984_11242359223300012469Avena Fatua RhizosphereLDDAALLISCAEAGLVLVAFDRATLPWHAGQAVRAGESHGGLILFRRSVRSTDYGDQARLVTDFWLREARGWDWTNRIVYLPKSP*
Ga0150984_12048298613300012469Avena Fatua RhizosphereLVLVAFDRATLPWHAGQVLRAGESHGGVILFRRGVRSTNYGDQARLVTDFWFSEGRAWDWMNRIVYLPKSP*
Ga0150984_12083931123300012469Avena Fatua RhizosphereMSCAEASLVLVAFDRATLPWHAGQVLRAGESHGGLILFRRTVRSTNYGEQARLLTEFWFNESRAWDWMNRIVYLPKSP*
Ga0137398_1081684823300012683Vadose Zone SoilLGLDDAALLTGCAEAALVLVAFDRSTLGWHAGQLLRAGQDHAGLILFRGTVRSSDYGYQARLLTGFWQNEGGLWDWRNRMAYLPRSL*
Ga0137397_1040193533300012685Vadose Zone SoilVAKELPIIHIARWQDGSWLGLDDAALLMSCAEAGLMLVAFDRATLPWHAGQVLRAGESYGGLILFRRADRSTNYGEQARLLTEFWPNEGRAWDWTNRIVYLPQSP*
Ga0137397_1108766813300012685Vadose Zone SoilHIASWQDGSWLGLDDAALLISGAQARLVLVAFDRATLPWHAGQVLRAGENHGGLVLFRRTVRSTACGDQARLLTDFWAHEGHAWDWINRIVYLPQSPQALP*
Ga0137394_1056649433300012922Vadose Zone SoilVLVGFDRATLAWHAGQLVRAGNDHAGIILFRGKVRASDYGYQARLLTGFWKNEGWNWDWHNRIVYLPKSL*
Ga0137394_1111080413300012922Vadose Zone SoilGLVLVAFDRATFPWHAGQVLRAGENHGGLVLFRRTVRTTAYGDQARLLTDFWVHEGHAWDWVNRIVYLPKSP*
Ga0137416_1223170813300012927Vadose Zone SoilANWEDGIWLGLDDTALLICCAESSLVLVAFDRATLAWHAGQLLRAGQDHAGLVLFRGTVRSADYGYQARLLTTFWQAEGNAWDWQNRIVYLPKSP*
Ga0126375_1047011523300012948Tropical Forest SoilGGSWLGLDDVALLVSCGAEGLILVAFDRATLPWHAGQVVRAGDDYAGLILFRRAVRSTNCGQQAQLLTQFWTDEGQTWDWRNRIVYLPKTP*
Ga0157307_116769413300013096SoilALLISCAEADLVLVAFDRATLAWHAGQLLRAGHDHCGLILFRRTVRSTDYGQQARLLTRFWIEEGSAWDWRNRIVYLPKSP*
Ga0157375_1121383223300013308Miscanthus RhizosphereVHIATWQGGSWLGLDDAALLISYAVVCFKQVAFDRATLPWHAGQVLREGEDHGGLVVFRRSVRSTDYGSQARLLTGFWTDEGQKWEWLNHIVYRPKTR*
Ga0157375_1299271713300013308Miscanthus RhizosphereMDDAALLLACAGAKRVLIAFDRATLPWHAGQLLRAGHDHGGLLLFRRMVHSTDYGQQARLVTTLWKQEGKDWDWLNRIVYLPKSP*
Ga0075313_107242313300014267Natural And Restored WetlandsLDDAALLISCAEAGLVLVAFDRATLPWHAGQVVRAGESHGGLILFRRSVRSTDYGHQARLVTDFWLREARGWDWTNRI
Ga0075309_108180113300014268Natural And Restored WetlandsLDDAALLISCAEAGLMLVAFDRATLPWHAGQVVRAGESHGGLILFRRSVRSTDYGDQARLVTDFWLREARGWDWTNRIVYLPKSP*
Ga0075326_129951313300014271Natural And Restored WetlandsLDDAALLISCAEAGLVLVAFDRATLPWHAGQVVRAGESHGGLILFRRSVRSTDYGDQARLVTDFWLRQARGWDWT
Ga0134089_1048086923300015358Grasslands SoilVHIATWQGGSWLGLDDAALLISCAEAGLVLVAFDRATLPWHAGQVLRAGENHGGLMLFRRTVRSTDYGAQARLLTGFWTDEGRTWEWLNRIVYLPKTP*
Ga0132256_10218197923300015372Arabidopsis RhizosphereVHIATWQGGSWLGLDDAALLISCAEAGLVLVAFDRATLPWHAGQVLREGEDHGGLVVFRRSVRSTDYGSQARLLTGFWTDEGQKWEWLNRIVYLPNTR*
Ga0132256_10330422913300015372Arabidopsis RhizosphereAALLIAGAEAGLVLVAFDRATLPWHAGQVLRSGENHGGLILFRRSVRSTDYGQQARLLTQFWADEAHEWNWTDRIVYLPKWP*
Ga0132255_10030783413300015374Arabidopsis RhizosphereEADLVLVAFDRATLAWHAGQLLRAGHDHCGLILFRRTVRSTDYGQQARLLTRFWIEEGSAWDWRNRIVYLPKSP*
Ga0132255_10456628013300015374Arabidopsis RhizosphereVLVAFDRATLPWHAGQVVRAGESHGGLILFRRSVRSTDYGDQARLVTDFWLREARGWDWTNRIVYLPKSP*
Ga0182041_1061625813300016294SoilFDRATLPWHAGQVLRAGETHGGLVLFRRSVPTTDYGYQARLLTGFWTEEGEQWDWRNRIVYLPKSPDNKRRQGG
Ga0182035_1010959323300016341SoilLVAFDRATLPWHAGQVIRAGETHGGLVLFRRSVRSTDYGHQARLLTGFWTEEGEQWDWRNRIVYLPKSPDDRPRQGRRTWGQPRSLTSG
Ga0184620_1014869323300018051Groundwater SedimentLDDAALLISCAEAGLVLVAFDRATLPWHAGQVVRAGESHGGLILFRRSVRSTDYGDQARLVTEFWLREGRGWDWTNRVVYLPKSP
Ga0184632_1008078033300018075Groundwater SedimentMSCAEAGLVLVAFDRATLPWHAGQVLRAGESHGGLILFRRTVRSTNYGDQARLVTDYWFREGRAWDWTNRIVYLPKSP
Ga0184609_1043743623300018076Groundwater SedimentLLGLDDAALLISCAEAGLVLVAFDRATLPWHAGQVVRAGESHGGLILFRRSVRSTDYGDQARLVTEFWLREGRGWDWTNRVVYLPKSP
Ga0190265_1093046923300018422SoilLDDAALLISCAEASLVLVAFDRATLPWHAGQVVRAGETHGGLILFRRSVRSTDYGDQARLVTDFWLREGRGWDWTNRIVYLPKSP
Ga0190272_1207130613300018429SoilEAGLVLVAFDRATLPWHAGQVVRAGESHGGLILFRRSVRSTDYGDQARLVTDFWLREGRGWDWTNRIVYLPKSP
Ga0066667_1135772223300018433Grasslands SoilLISCAEAGLVLVAFDRATLPWHAGQVVRAGESHGGLILFRRTVRSTNYGEQARLVSEFWSSQGQGWDWTNRIVYLPKSP
Ga0190270_1002368033300018469SoilMVHIAHWQDGSWLGLDDAALLMSCAEAGLVLVAFDRATLPWHAGQVLRAGQSHGGLLLFRRTVRSTDYGHQTRLLTEFWADEGRAWDWLNRVVYLPKSTSAR
Ga0187893_1005437723300019487Microbial Mat On RocksMACAEVGLVVVAFDRATLPWHAGQVLRLGESHGGLILFRRTVRTTSYGQQARLLTELRAEGHDWDRINRIVYLPKSP
Ga0187893_1035481713300019487Microbial Mat On RocksVLVAFDRATLPWHAGQVVRSGESHGGLILFRRSVRSTDYGDQARLVTGFWLREGRGWDWTNRIVYLPKSP
Ga0193728_112988723300019890SoilLDGGWLGLDDSALLVSCLEPKLVLVAFDRATLAWHAGQLNRAGQDHAGLILFRGIVRSSDYGRQARLLSNFWQEDGAAWDWQNRIVYLPRSI
Ga0210399_1151112413300020581SoilSWLGLDDAALLIAGAELGLVLVAFDRATLPWHAGQVIRSGESHGGLILFRRTVRTTNYGQQARLLTEFWAHEGHVWDWLNRIVYLPKSP
Ga0210410_1033283413300021479SoilWQDGSWLGLDDAALLIACAEFGLVLVAFDRATLPWHAGQVIRSGESHGGLILFRRTVRSTNYREQARLLTEFWAHEGHAWDWLNRFVYLPKSP
(restricted) Ga0233424_1038929413300023208FreshwaterACAEHGLVLVAFDRATLPWHAGQVLRAGESHGGLILFRRSVRSTDYGEQARLLTDFWTSEGGQWDWRNRIVYLPTPRGTA
Ga0209320_1038278513300025155SoilHGVYILAQNEAGLVLVAFDRATLPWHAGQLLRAGEDHGGLVLFRRTVRSTDYGHQARLLTGFWRDEGQAWDWLNRIVYLPKSL
Ga0209399_1002482833300025157Thermal SpringsVLVAFDRATLPWHAAQVIRGGASHGGLVLFRRTVRNTGYGYQARLLTDLWIHDGHAWDWLNRTVYLPKSL
Ga0209619_1049602413300025159SoilAEAGLVLVAFDRATLPWHAGQLLRAGEDHGGLVLFRRTVRSTDYGHQARLLTGFWRDEGQAWDWLNRIVYLPKSL
Ga0209109_1008667313300025160SoilLVAFDRATLPWHAGQVLRAGHNHGGLVLFRRTVRSTDYGHQARLLTDFWDREGHLWGWLNRVVYLPTATSAA
Ga0209109_1016477713300025160SoilFDRATLPWHAGQLLRAGEDHGGLVLFRRTVRSTDYGHQARLLTGFWRDEGQAWDWLNRIVYLPKSL
Ga0209108_1017216723300025165SoilMVHIASWQDGSWLGLDDAALLISCAQAGLVLVAFDRATLPWHAGQVLRAGENHGGLVLFRRTVRSTAYGNQARLLTGFWVHGGHAWDWVNRIVYLPKSP
Ga0209108_1044607513300025165SoilVLVAFDRATLPWHAGQVVRAGDNHGGLVLFRRTVRTTDYGHQARLLTDFWLRESSTWDWLNRIVYLPKSVPGT
Ga0209520_1080077113300025319SoilQDGSWLGLDDATLLVACAEAGLVLVAFDRATLPWHAGQLLRAGEDHGGLVLFRRTVRSTDYGHQARLLTGFWRDEGQAWDWLNRIVYLPKSL
Ga0209640_1018415633300025324SoilMVHIASWQDGSWLGLDDAALLISCAQAGLVLVAFDRATLPWHAGQVLRAGENHGGLVLFRRTVRSTAYGSQALLLTGFWVHEGHAWDWVNRIVYLPKSP
Ga0209341_1052517423300025325SoilVAGPRRCALLIACAESGLILVAFDRATLPWHAGQVIRAGEKHGGLILFRRTVRTTNDGQQARLLSDFWTLEGHAWDWLNRIVYLPTSP
Ga0207710_1002013533300025900Switchgrass RhizosphereMDDATLLMSCAEADLVLVAFDRATLPWHAGQVVRAGEDYGGLILFRRGVRSTDYGNQARLVTDFWFREAHGWDWTNRIVYLPKAP
Ga0207699_1003478953300025906Corn, Switchgrass And Miscanthus RhizosphereVLVAFDRATLPWHAGQVVRAGESHGGLILFRRIVRSTNYGEQARLLTGFWFNEGRAWDWMNRIVYLPKSP
Ga0209156_10002781163300026547SoilMSCAEAGLVLVAFDRATLPWHAGQVLRAGESHGGLILFRRTVRSTNYGDQARLVTDFWFGEGRGWDWTNRIVYLPKSP
Ga0209387_100755023300027639Agricultural SoilQDGSWLGLDDVALLISCAEAGLVLVAFDRATLPWHAGQVVRSGEDHGGLILFRRSVRSTDYGDQGRLVTNFWVREGQGSEWTNRIVYLPKSP
Ga0209515_1004805613300027835GroundwaterIVHIASWQNGSWLGLDDAALLMACADSELVLVAFDRATLPWHAGQVLRAGENHGGLVLFRRSVRSTAYGDQARLLTGFWAHEGQAWDWRNRIVYLPKSP
Ga0209974_1000752133300027876Arabidopsis Thaliana RhizosphereVLVAFDRATLPWHAGQVLRAGQNHGGLVLFRRTVRSTDYGHHQARLLTEFWADEGRAWDWLNRVVYLPKATSAS
Ga0209486_1045448723300027886Agricultural SoilHRVLVAFDRATLAWHAGQLIRTGHEHGGLTLFRRSVRSTGYGKQARLLVSFWDEAEAWDWINRIAYLPKAA
Ga0207428_1036994313300027907Populus RhizosphereAGPVLVAFDRATLPWHAGQVLRAGENHGGLVLFRRTVRSTAYGDHARLLIDFWVHEGHAWDWVNRIVYLPKSP
Ga0209382_1051771523300027909Populus RhizosphereVIHIARWQDGSWLGLDDAALLISCAEAGLVLVAFDRATLPWHAGQVVRAGESHGGLILFRRSVRSTDYGDQARLVTEFWLREGRGWDWTNRVVYLPTRK
Ga0209382_1124397423300027909Populus RhizosphereSLCAEVGLVLVAFDRATLPWHAGQVLRAGDSHGGLILFRRTVRSTNYGEQARLLTEFWFKEGHAWDWMNRIVYLPKSP
Ga0209382_1200270723300027909Populus RhizosphereWISHRAHRAVAGRLLLGQDDAALLISCADAGLVLVAFDRATLPWHAGQVLRAGESHGGLILFRRTVRTTNDGEQARLLTEFWSREGHAWDWANRIVYLPTSP
Ga0209526_1005468313300028047Forest SoilLLITGAELGLALVAFDRATLPWHAGQVIRSGESHGGLILFRRTVRSTNYGQQARLLTEFWDHEGHAWDWLNRVVYLPKSP
Ga0209526_1099251913300028047Forest SoilGLALVAFDRATLPWHAGQVIRSGESHGGLILFRRAVRTTNYGQQARLLTEFWAHEGHAWDWLNRIVYLPKSP
Ga0299907_1037887613300030006SoilMSCTEAGLVLVAFDRATLPWHAGQVLRAGESHGGLILFRRTVRSTNYGEQARLLTEFWFKEARTWDWTNRIVYLPKSP
Ga0299913_1049756833300031229SoilLDDAALLISCAEASLVLVAFDRATLPWHAGQVVRAGESHGGLILFRRSIRSTDYGDQARLVTDFWLREGRGWDWTNRIVYLPKSP
Ga0299913_1129128723300031229SoilSWLGLDDAALLIACAEHGLVLVAFDRATLPWHAGQVLRAGESHGGLVLFRRSVRSTDYGYQARLLTGFWTNEGGRWDWRNRIVYLPKSPDDHPRQVR
Ga0318552_1047739823300031782SoilGQVLRAGETHGGLVLFRRSVPTTDYGYQARLLTGFWTEEGEQWDWRNRIVYLPKSPDNKRRQGG
Ga0315290_1119579813300031834SedimentLLMSCSEAGLLLVAFDRATLPWHAGNLLRAGESHGGLVLFRRSVRSTDYGHQARILTTFWADEGRKWDWSNRMVYLPKAP
Ga0307407_1105038113300031903RhizosphereWQDGSWLGLDDAALLISCAEANLVLVAFDRATLPWHAGQVVRAGENHGGLILFRRSVRSTDYGDQARLVTDFWLREARGWDLTNRIVYLPKSP
Ga0310885_1014335733300031943SoilMSCAEAGLVLVAFDRATLPWHAGQVLRAGQNHGGLVLFRRTVRSTDYGHQARLLTEFWADEGHAWDWLNRVVYLPKSTS
Ga0214473_1064486323300031949SoilCAEAGLVLVAFDRATLPWHAGQVVRAGDNHGGLVLFRRTVRTTDYGHQARLLTDFWLRESSTWDWLNRIVYLPKSVPGT
Ga0306926_1166316113300031954SoilFDRATLPWHAGQLLRAGERHGGLILFRRTVRSTNYGEQARLLTGFWFDEGRAWDWVNRIVYLPKSP
Ga0326597_1031637523300031965SoilVLVTRALANWQDGAWLGLDAAALLISSAQAGPVLVAFDRATLPWHAGQVLRAGEHHAGLVLFRRTVRSTAHGDRARLLTDFWAHEGQTWEWVNRIIYLPKSP
Ga0306924_1235237413300032076SoilMACAEAGLALVAFDRATLPWHAGQVFRAGESHGGLILFRRTVRSTNYGEQARLLTEFWFKEGGDRDWMNRIVYLPKS
Ga0307471_10107524423300032180Hardwood Forest SoilMACSEAGLVLVAFDRATLPWHAGQVLRAGENHGGLILFRRSVRSTSYGDQARLVTNFWSSDGHGWDWTNRIVYLPK
Ga0315270_1063884523300032275SedimentAGLVLVAFDRATLPWHAGNLLRAGESHGGLVLFRRSVRSTDYGHQARILTTFWADEGRTWDWLNRMVYLPKAP
Ga0310914_1110730413300033289SoilQDGSWLGLDDAALLMSCAEAGLVLVAFDRATLPWHAGQLLRAGERHGGLILFRRTVRSTNYGEQARLLTGFWFDEGRAWDWVNRIVYLPKSP
Ga0214472_1154591713300033407SoilVAFDRATLPWHAGQLLRAGEDHGGLMLFRRAVRSTDYGRQARLVTDFWLREGAARDWLNRIVYLPKTVAAPG
Ga0364927_0128774_3_2063300034148SedimentAFDRATLPWHAGQVLRAGESHGGLILFRRTVRSTNYGEQARLLTEFWFTGGHAWDWMNRIVYLPKSP
Ga0364943_0145526_570_8273300034354SedimentLDDAALLISCAEAGLVLVAFDRATLPWHAGQVVRAGESHGGLILFRRSVRSTDYGDQARLVTDFWLRECRGWDWTNRIVYLPKSP


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