Metagenome / Metatranscriptome Family F043517

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F043517
Family Type	Metagenome / Metatranscriptome
Number of Sequences	156
Average Sequence Length	93 residues
Representative Sequence	MPSASSPVKDALESYIAGRVKAERLVIAVSAAYYREAPNGKRETLQPLIDVIDRASPGIVELGTVQGGSGFDVRLAERPFPKQHEPELRRAA
Number of Associated Samples	122
Number of Associated Scaffolds	156

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	11.69 %
% of genes near scaffold ends (potentially truncated)	96.79 %
% of genes from short scaffolds (< 2000 bps)	91.03 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.718 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (23.077 % of family members)
Environment Ontology (ENVO)	Unclassified (58.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.026 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.83% β-sheet: 8.33% Coil/Unstructured: 50.83%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 156 Family Scaffolds
PF02163	Peptidase_M50	84.62
PF13288	DXPR_C	7.69
PF13180	PDZ_2	2.56
PF01255	Prenyltransf	1.28
PF01148	CTP_transf_1	0.64
PF08436	DXP_redisom_C	0.64
PF01841	Transglut_core	0.64
PF00069	Pkinase	0.64

COG ID	Name	Functional Category	% Frequency in 156 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.56
COG0020	Undecaprenyl pyrophosphate synthase	Lipid transport and metabolism [I]	1.28
COG0743	1-deoxy-D-xylulose 5-phosphate reductoisomerase	Lipid transport and metabolism [I]	0.64

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.72 %
Unclassified	root	N/A	1.28 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.72 %
Unclassified	root	N/A	1.28 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.72 %
Unclassified	root	N/A	1.28 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	84.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.28 %
Unclassified	root	N/A	1.28 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	84.62 %
Unclassified	root	N/A	1.28 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	1.28 %
Unclassified	root	N/A	1.28 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.64 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	1.28 %
Unclassified	root	N/A	1.28 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.64 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1.28 %
Unclassified	root	N/A	1.28 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.64 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	1.28 %
Unclassified	root	N/A	1.28 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.64 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1.28 %
Unclassified	root	N/A	1.28 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.64 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.64 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002557\|JGI25381J37097_1031186	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	911	Open in IMG/M
3300002558\|JGI25385J37094_10093005	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	909	Open in IMG/M
3300002561\|JGI25384J37096_10133402	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	815	Open in IMG/M
3300002908\|JGI25382J43887_10063926	All Organisms → cellular organisms → Bacteria	1992	Open in IMG/M
3300002908\|JGI25382J43887_10064526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1981	Open in IMG/M
3300002909\|JGI25388J43891_1010727	All Organisms → cellular organisms → Bacteria	1719	Open in IMG/M
3300002911\|JGI25390J43892_10045032	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1050	Open in IMG/M
3300002911\|JGI25390J43892_10118385	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	603	Open in IMG/M
3300002912\|JGI25386J43895_10025042	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1756	Open in IMG/M
3300002914\|JGI25617J43924_10312157	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	542	Open in IMG/M
3300005172\|Ga0066683_10077412	All Organisms → cellular organisms → Bacteria	1999	Open in IMG/M
3300005175\|Ga0066673_10447126	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	759	Open in IMG/M
3300005180\|Ga0066685_10272947	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1168	Open in IMG/M
3300005180\|Ga0066685_11169273	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	500	Open in IMG/M
3300005186\|Ga0066676_11078224	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	530	Open in IMG/M
3300005187\|Ga0066675_11272031	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	543	Open in IMG/M
3300005406\|Ga0070703_10123603	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	942	Open in IMG/M
3300005440\|Ga0070705_100908790	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	708	Open in IMG/M
3300005444\|Ga0070694_100269839	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1293	Open in IMG/M
3300005446\|Ga0066686_10093751	All Organisms → cellular organisms → Bacteria	1923	Open in IMG/M
3300005447\|Ga0066689_10765257	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	601	Open in IMG/M
3300005450\|Ga0066682_10169904	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1393	Open in IMG/M
3300005471\|Ga0070698_100541935	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1103	Open in IMG/M
3300005540\|Ga0066697_10763587	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	526	Open in IMG/M
3300005549\|Ga0070704_100007933	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	6336	Open in IMG/M
3300005555\|Ga0066692_10560111	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	722	Open in IMG/M
3300005555\|Ga0066692_10840805	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	563	Open in IMG/M
3300005556\|Ga0066707_11029434	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	501	Open in IMG/M
3300005558\|Ga0066698_10522030	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	807	Open in IMG/M
3300005566\|Ga0066693_10294332	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	648	Open in IMG/M
3300005569\|Ga0066705_10322683	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	977	Open in IMG/M
3300005586\|Ga0066691_10589739	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	661	Open in IMG/M
3300005587\|Ga0066654_10099422	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1402	Open in IMG/M
3300006032\|Ga0066696_10247617	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1150	Open in IMG/M
3300006034\|Ga0066656_11052922	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	522	Open in IMG/M
3300006175\|Ga0070712_101562006	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	577	Open in IMG/M
3300006755\|Ga0079222_12214633	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	547	Open in IMG/M
3300006797\|Ga0066659_10410681	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1067	Open in IMG/M
3300006797\|Ga0066659_11602209	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	547	Open in IMG/M
3300006806\|Ga0079220_12111974	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	505	Open in IMG/M
3300006903\|Ga0075426_11519806	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	509	Open in IMG/M
3300006914\|Ga0075436_100774213	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	713	Open in IMG/M
3300006954\|Ga0079219_12263114	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	525	Open in IMG/M
3300007004\|Ga0079218_11339235	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	758	Open in IMG/M
3300007255\|Ga0099791_10217135	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	903	Open in IMG/M
3300007258\|Ga0099793_10063040	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1661	Open in IMG/M
3300007258\|Ga0099793_10517540	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	594	Open in IMG/M
3300009012\|Ga0066710_101295814	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1130	Open in IMG/M
3300009012\|Ga0066710_103335525	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	612	Open in IMG/M
3300009012\|Ga0066710_103519322	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	592	Open in IMG/M
3300009038\|Ga0099829_10147242	All Organisms → cellular organisms → Bacteria	1877	Open in IMG/M
3300009038\|Ga0099829_10155913	All Organisms → cellular organisms → Bacteria	1825	Open in IMG/M
3300009089\|Ga0099828_10729576	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	889	Open in IMG/M
3300009089\|Ga0099828_11832423	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	533	Open in IMG/M
3300009090\|Ga0099827_11219008	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	654	Open in IMG/M
3300009090\|Ga0099827_11555738	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	576	Open in IMG/M
3300009137\|Ga0066709_100796593	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1369	Open in IMG/M
3300009137\|Ga0066709_102853861	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	639	Open in IMG/M
3300009147\|Ga0114129_12160109	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	670	Open in IMG/M
3300010120\|Ga0127451_1091623	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	695	Open in IMG/M
3300010141\|Ga0127499_1080019	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	725	Open in IMG/M
3300010301\|Ga0134070_10049152	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1421	Open in IMG/M
3300010301\|Ga0134070_10176373	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	775	Open in IMG/M
3300010303\|Ga0134082_10267197	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	711	Open in IMG/M
3300010304\|Ga0134088_10451719	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	630	Open in IMG/M
3300010320\|Ga0134109_10114607	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	948	Open in IMG/M
3300010320\|Ga0134109_10318765	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	603	Open in IMG/M
3300010322\|Ga0134084_10354818	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	560	Open in IMG/M
3300010326\|Ga0134065_10480463	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	514	Open in IMG/M
3300010333\|Ga0134080_10099799	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1192	Open in IMG/M
3300010333\|Ga0134080_10604256	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	534	Open in IMG/M
3300010333\|Ga0134080_10697239	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	503	Open in IMG/M
3300010336\|Ga0134071_10580176	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	585	Open in IMG/M
3300010337\|Ga0134062_10149061	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1039	Open in IMG/M
3300010364\|Ga0134066_10313230	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	568	Open in IMG/M
3300010371\|Ga0134125_10674006	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1141	Open in IMG/M
3300010373\|Ga0134128_10257931	All Organisms → cellular organisms → Bacteria	1956	Open in IMG/M
3300010401\|Ga0134121_12416763	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	566	Open in IMG/M
3300011271\|Ga0137393_10450185	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1104	Open in IMG/M
3300012096\|Ga0137389_10211139	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1620	Open in IMG/M
3300012096\|Ga0137389_10229774	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1553	Open in IMG/M
3300012189\|Ga0137388_10108142	All Organisms → cellular organisms → Bacteria	2402	Open in IMG/M
3300012189\|Ga0137388_10227379	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1691	Open in IMG/M
3300012189\|Ga0137388_11575690	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	593	Open in IMG/M
3300012198\|Ga0137364_11172474	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	576	Open in IMG/M
3300012205\|Ga0137362_10665814	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	896	Open in IMG/M
3300012205\|Ga0137362_11715270	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	515	Open in IMG/M
3300012207\|Ga0137381_10905858	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	762	Open in IMG/M
3300012207\|Ga0137381_11109468	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	681	Open in IMG/M
3300012209\|Ga0137379_11069206	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	712	Open in IMG/M
3300012349\|Ga0137387_10508965	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	874	Open in IMG/M
3300012349\|Ga0137387_10527152	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	857	Open in IMG/M
3300012351\|Ga0137386_10646903	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	760	Open in IMG/M
3300012356\|Ga0137371_10534267	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	904	Open in IMG/M
3300012356\|Ga0137371_10997649	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	635	Open in IMG/M
3300012357\|Ga0137384_10164603	All Organisms → cellular organisms → Bacteria → Proteobacteria	1856	Open in IMG/M
3300012357\|Ga0137384_10217223	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1598	Open in IMG/M
3300012401\|Ga0134055_1247811	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	743	Open in IMG/M
3300012407\|Ga0134050_1221892	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	531	Open in IMG/M
3300012582\|Ga0137358_10058949	All Organisms → cellular organisms → Bacteria	2566	Open in IMG/M
3300012929\|Ga0137404_10170024	All Organisms → cellular organisms → Bacteria	1827	Open in IMG/M
3300012930\|Ga0137407_10742202	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	926	Open in IMG/M
3300012931\|Ga0153915_13030531	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	547	Open in IMG/M
3300012976\|Ga0134076_10620528	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	507	Open in IMG/M
3300014154\|Ga0134075_10097200	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1243	Open in IMG/M
3300014157\|Ga0134078_10005725	All Organisms → cellular organisms → Bacteria	3442	Open in IMG/M
3300015356\|Ga0134073_10014125	All Organisms → cellular organisms → Bacteria	1830	Open in IMG/M
3300015356\|Ga0134073_10401376	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	517	Open in IMG/M
3300017654\|Ga0134069_1034223	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1567	Open in IMG/M
3300017656\|Ga0134112_10111889	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1032	Open in IMG/M
3300017656\|Ga0134112_10467722	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	530	Open in IMG/M
3300017657\|Ga0134074_1012700	All Organisms → cellular organisms → Bacteria	2733	Open in IMG/M
3300017659\|Ga0134083_10079911	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1268	Open in IMG/M
3300018431\|Ga0066655_10337275	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	987	Open in IMG/M
3300018433\|Ga0066667_10064156	All Organisms → cellular organisms → Bacteria	2289	Open in IMG/M
3300018433\|Ga0066667_12308774	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	504	Open in IMG/M
3300018468\|Ga0066662_11046753	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	811	Open in IMG/M
3300018468\|Ga0066662_11921779	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	619	Open in IMG/M
3300018482\|Ga0066669_10465109	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1089	Open in IMG/M
3300018482\|Ga0066669_11240760	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	673	Open in IMG/M
3300019279\|Ga0184642_1278450	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1461	Open in IMG/M
3300019789\|Ga0137408_1203804	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1418	Open in IMG/M
3300021080\|Ga0210382_10400893	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	607	Open in IMG/M
3300021178\|Ga0210408_11323595	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	545	Open in IMG/M
3300025885\|Ga0207653_10006052	All Organisms → cellular organisms → Bacteria	3772	Open in IMG/M
3300025910\|Ga0207684_11690733	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	510	Open in IMG/M
3300026297\|Ga0209237_1138399	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	979	Open in IMG/M
3300026298\|Ga0209236_1024069	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3353	Open in IMG/M
3300026298\|Ga0209236_1174879	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	862	Open in IMG/M
3300026301\|Ga0209238_1037279	All Organisms → cellular organisms → Bacteria	1785	Open in IMG/M
3300026308\|Ga0209265_1043064	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1397	Open in IMG/M
3300026313\|Ga0209761_1301061	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	558	Open in IMG/M
3300026323\|Ga0209472_1006586	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	6118	Open in IMG/M
3300026323\|Ga0209472_1098585	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1168	Open in IMG/M
3300026325\|Ga0209152_10384100	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	546	Open in IMG/M
3300026327\|Ga0209266_1146699	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	961	Open in IMG/M
3300026330\|Ga0209473_1059021	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1652	Open in IMG/M
3300026335\|Ga0209804_1253306	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	652	Open in IMG/M
3300026343\|Ga0209159_1172879	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	784	Open in IMG/M
3300026532\|Ga0209160_1224308	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	657	Open in IMG/M
3300026536\|Ga0209058_1057535	All Organisms → cellular organisms → Bacteria	2167	Open in IMG/M
3300026537\|Ga0209157_1094745	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1432	Open in IMG/M
3300026540\|Ga0209376_1176366	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	998	Open in IMG/M
3300026551\|Ga0209648_10229690	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1391	Open in IMG/M
3300026557\|Ga0179587_10066331	All Organisms → cellular organisms → Bacteria	2116	Open in IMG/M
3300027681\|Ga0208991_1072066	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300027846\|Ga0209180_10442825	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	733	Open in IMG/M
3300027875\|Ga0209283_10067828	All Organisms → cellular organisms → Bacteria	2294	Open in IMG/M
3300027875\|Ga0209283_10356018	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	960	Open in IMG/M
3300028792\|Ga0307504_10185506	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	728	Open in IMG/M
3300028828\|Ga0307312_10248715	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1150	Open in IMG/M
3300031720\|Ga0307469_10453003	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1111	Open in IMG/M
3300031740\|Ga0307468_102255660	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	528	Open in IMG/M
3300032205\|Ga0307472_101117303	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	747	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.08%
Host-Associated	Host-Associated	1.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.15%
Aquatic	Environmental → Aquatic	1.92%
Plants	Host-Associated → Plants	1.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.15%
Freshwater	Environmental → Aquatic → Freshwater	1.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.74%
Loam	Environmental → Terrestrial → Soil → Loam	6.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.92%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.28%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.87%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	39.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.13%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.28%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.64%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.64%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	21.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	18.59%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	17.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.13%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.56%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.92%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.92%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.28%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.64%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.64%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010120	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010141	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012401	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012407	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25381J37097_10311862	3300002557	Grasslands Soil	MSSSVRHELEGFVAGRVKAERVVSAVAAAYYGDEARRTRDGLGPLIEVIDRASPGIVELGPVQGGSGFEIRLAERPFPRQYEADLRQAAEAVLA
JGI25385J37094_100930051	3300002558	Grasslands Soil	VSSSVREAVESYIAGRVKAERLVVAVAAEYYRDAANGKREALQPLIDVIDRASPGIVELGTVQGGSGFAISLAERPFPKEHEAELRR
JGI25384J37096_101334022	3300002561	Grasslands Soil	MPSVSSPVKDALESYVAGRLRAERLVVTVAAEYYRDARNGKRETLRPLIDVIDRASPGIVELGTVQGGSGFAISPAERPFPKQYEAELRRAA
JGI25382J43887_100639261	3300002908	Grasslands Soil	VSSSVREAVESYIAGRVKAERLVVAVAAEYYRDAANGKREALQPLIDVIDRASPGIVELGTVQGGSGFAISLAERPFPKEHEAELRRAAEAVLSGGGMVEAAT
JGI25382J43887_100645261	3300002908	Grasslands Soil	MPSASSPVKDALESYIAGRVKAERLVIAVSAAYYREAPNGKRETLQPLIDVIDRASPGIVELGTAQGGSGFAISLAERPFPKEHEAELRRAAXAVLSGGGMVEGATGAQ
JGI25388J43891_10107273	3300002909	Grasslands Soil	MPSGFSPVKEALEAYVAGRVKAERLVVAVAAEYYRDALNGKREMLRPLIDVIDRASPGIVELGRADGGPGFELR
JGI25390J43892_100450322	3300002911	Grasslands Soil	MPSGFSPVKETLEAYVAGRVKAERLVVAVAAEYYRDALNPKGLPNGRGKREMLRPLIDVIDRASPGIVELGTVQG
JGI25390J43892_101183852	3300002911	Grasslands Soil	VSSPVKDALESYVAGRVKPERLVIAISAAYYGDSTNGNRESLQPLIDVIDRASPGIVELGTVQGGSGFAISLAERPFPKQYEAELRRAAEAVLRGTGVFGGATDVGAQHAT
JGI25386J43895_100250422	3300002912	Grasslands Soil	MPSASSPVKDALESYVAGRLKAERLVIAISAEYYREARDGRREALQPLIDVIDRASPGIVELGTATGGTGFEIRLAERPFPKQHEAELRRVAEAVLSGCGMRDTGWVNP
JGI25617J43924_103121571	3300002914	Grasslands Soil	MSSASSPVSDALAGYVAGRIKPERVVITVAAAFYGARAGGERRALQPLIDVIDRASPGIVELGSVAGGVGFEIRLAERPFPRQYEAALRRAAETVLAASGGPALGEASPAV
Ga0066683_100774121	3300005172	Soil	MPSVSSPVKVALESYVAGRLKAERLVIAVSAEYYREARDGRREALQPLIDVIDRASPGIVELGTAPGGSGFEIRLAERPFPKQYQAELRRAAEAVLSGGGMR
Ga0066673_104471262	3300005175	Soil	MPSGFSPVKEALEAYVAGRVKAERLVVAVAAEYYRDALNGKREMLRPLIDVIDRASPGIVELGTVQGGSGFDVRLAER
Ga0066685_102729472	3300005180	Soil	VAGRVNAERLVITVTSAYYGRDGGRGTRDGLGPVIEVIDRASPGIVELGTVQGGAGFEVRLAERPFPKQWEGELRRAAEAVLHAGER
Ga0066685_111692731	3300005180	Soil	MSSSVRREVEGFVAGRVKAERLVIAVAAAYYREAGNGKRETLRPLIDVIDRASPGIVELGIVPGGTGFEVRLAERPFPKEYERELRQAA
Ga0066676_110782241	3300005186	Soil	VAGRVKAERLVVAVAAEYYRDTLNGKREMLRPLIDVIDRASPGIVELGTVQGGSGFDVRLAERPFPKQHEPELRRAAEAVLSGGG
Ga0066675_112720312	3300005187	Soil	MSSSVRREVEGFVAGRVKAERLVIAVAAAYYREAGNGKRETLRPLIDVIDRASPGIVELGIVPRGAGFEVRLAERPFPKEYERELRQAAEAV
Ga0070703_101236031	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MPSGSSPVKEALESYVAGRVKAERLVIAVSAAYYRERGNGKGETLRPLIDVIDRASPGIVELGTVQGGSGFDVRLAERPFPKQHEAELRR
Ga0070705_1009087901	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MPSASSPIKDTLQSYVAGRVKAERLVVAVAAEYYRDAGNGKRETLRPLIDVIDRASPGIVELGSAGGGPGFELRLA
Ga0070694_1002698392	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MPSASSPVKDALESYVAGRVKAERLVVAVASEFYGDAGCGMRDALRPLIEVIDRASPGVVELGTLPGGAGFEVRLAERSFPKQHEAELRRAAE
Ga0066686_100937511	3300005446	Soil	MPSASSPVKDALESYVAGRVKAERLVIAVSAAYYRETGNGTREALQPLIDVIDRASPGIVELGTAQGGSGFEIRL
Ga0066689_107652572	3300005447	Soil	VAGRVKAERLVIAVSAAYYRDARNGQRESLQPLIDVIDRASPGIVELGTATSGPGFDIRLAERPFPKQYEAQLREAAEVVLSGGGMRDAGYVKAVET
Ga0066682_101699042	3300005450	Soil	LDSSRISDALESYVAGRLKAERLVIAISAAYYGDSNNGNRESLQPLIDVIDRASPGIVELGTATGGPGFDIRLAKRPFPKQHEAELREAAEAVLAGSGKRETGNVQS
Ga0070698_1005419351	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPSASSPVKDALESYVAGRVKAERLVVAVAAEYYRDAGNGKRETLRPLIDVIDRASPGIVELGSAGGGPGFELRLAERPFPKQYEAALRQAAEAVLAGSGKRE
Ga0066697_107635871	3300005540	Soil	MPSGSSPVKEALEAYVAGRVKAERLVVAVAAEYYRDTLNGKREMLRPLIDVIDRASPGIVELGTVQGGSGFDVRLAERPFPKQHEPELRRAAEAVLSGGGMR
Ga0070704_1000079338	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MPSASSPVKDALESYVAGRVKAERLVVAVAAEYYRDAGNGKRETLRPLIDVIDRASPGIVELGSAGGGPGFELRLAERPFPKQYEAALRQAAE
Ga0066692_105601112	3300005555	Soil	VSSPVKDALEGYVAGRVKAERLVIAVSAAYYRDARNGQRESLQPLIDVIDRASPGIVELGTATSGPGFDIRLAE
Ga0066692_108408052	3300005555	Soil	MPSASSPVKDALESYVAGRVKAERLVIAISAAYYGDSNNGNRESLQPLIDVIDRASPGIVELGTATGGPGFDIRLAERPFPKQHEAELREAAEAVLAGSGKRETGNV
Ga0066707_110294342	3300005556	Soil	MPSASSPVKDALESYVAGRVKAERLVIAISAAYYGDSNNGNRESLQPLIDVIDRASPGIVELGTATGGPGFDIRLA
Ga0066698_105220301	3300005558	Soil	MPSASSHVKDALESYLAGRVKAERLVVTIAAEYYRDAGNGKRETLQPLMDVIDRVSPGVVELGTAAGGAGFDIRLAKRPFPKQYEAQLR
Ga0066693_102943321	3300005566	Soil	MSSSVRREVEGFVAGRVKAERLVIAVAAAYYREAGNGKRETLRPLIDVIDRASPGIVELGIVPRGAGFEVRLAERPFPKEYERELRQAAEA
Ga0066705_103226832	3300005569	Soil	MPSVSSPVKVALESYVAGRLKAERLVIAVSAEYYREARDGRREALQPLIDVIDRASPGIVELGTAPGGSGFEIRLAERPFPKQYQAELRRAAEAVLSGGGMRDAGW
Ga0066691_105897392	3300005586	Soil	VTSPVRDVLEAYVAGRVNAERLVITVTSAYYGRDGGRGTRDGLGPVIEVIDRASPGIVELGTVQGGAGFEVRLAERPFPKQWEGELRRAAEAVLH
Ga0066654_100994221	3300005587	Soil	MSSSIRRELEGFVAGRVQAERLVIAVSAAYYRDSRNGNRETLQPLIDVIDRASPGIVELGTAAGGPGFDIRLAERPFPKQYEAQLREAAETVLSGCGMR
Ga0066696_102476172	3300006032	Soil	MPSVSSPVKVALESYVAGRLKAERLVIAVSAEYYREARDGRREALQPLIDVIDRASPGIVELGTAPGGSGFEIRLAERPFPK
Ga0066656_110529222	3300006034	Soil	MPSGSSPVKEALEAYVAGRVKAERLVVAVAAEYYRDTLNGKREMLRPLIDVIDRASPGIVELGTVQGGSGFDVRLAERPFPKQHEPELRRAAEAVLSGGG
Ga0070712_1015620061	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPSASSPIKDALESYIAGRVKAERLVIAVSAAYYREAGNGKRETLQPLMDVIDRASPGIVELGTVQGGSGFDVRLAERPFPKQYEAQLREAAETVLSG
Ga0079222_122146331	3300006755	Agricultural Soil	VAGRVNAERLVITVTSAYYGRDGGRGTRDGLGPVIEVIDRASPGIVELGTVQGGVGFEVRLAERPFPKQWEGELRRAAE
Ga0066659_104106811	3300006797	Soil	VSSPVKDALESYVAGRVKPERLVIAISAAYYGDSTNGNRESLQPLIDVIDRASPGIVELGTVQGGSGFAISLAERPFPKQYEAELRRAAEAVLRGTGVFGGATDVGAQHA
Ga0066659_116022091	3300006797	Soil	LDSSRISDALESYVAGRLKAERLVIAISAAYYGDSNNGNRESLQPLIDVIDRASPGIVELGTATGGPGFDIRLAKRPFPKQHEAELREAAEAVLAGSGKRETGNVQSAKAM
Ga0079220_121119742	3300006806	Agricultural Soil	MPSASSPVRDALESYIAGRVKAERLVIAVSAAYYREAGNGKRETLQPLMDVIDRASPGVVELGTVQGGSGFDVRLAERPFPKQYEAQLREAAETVLSGSGMRD
Ga0075426_115198061	3300006903	Populus Rhizosphere	MPSASSPVKDALESYIAGRVKAERLVVAVAAEYYRDAGNGKREGLRPLIDVIDRASPGIVELGTVPGGSGFAISLAERPFPKEHEAELRRAAETVLSGDGMREGA
Ga0075436_1007742132	3300006914	Populus Rhizosphere	MSSSVRREVEGFVAGRVKAERLVIAVATAYYGNGGRGKRDGLGPLIEVIDRASPGIVELGIAPGGAGFEIRLAERPFPKEYEGELRRAAETVLRGTHDVGAQHAAPLPK
Ga0079219_122631142	3300006954	Agricultural Soil	MPSASSPVRDALESYIAGRVKAERLVIAVSAAYYREAGNGKRETLQPLMDVIDRASPGVVELGTVQGGSGFDVRLAERPFPKQYEAQLREAAE
Ga0079218_113392351	3300007004	Agricultural Soil	MSSTVREALEAYVGGRVQADRVAIAVAVAYYGDADGGKREALRPLIDVIDRASPGVVELASGDGRSGFEIRLAERAFPQEYEAELRGAAEAVLSGWEMRD
Ga0099791_102171351	3300007255	Vadose Zone Soil	MPSASSPVKDALESYVAGRVKAERLVIAVSAAYYGDARNGQRESLQPLIDVIDRASPGIVELGIAAGGPGFDIRLAERPFPKEHEGELRRAAEAVLGRAEAGGEAWER
Ga0099793_100630401	3300007258	Vadose Zone Soil	MPSASSPVRDALESYVAGRVKAERLVIAVSTDYYREARDGRREALQPLIDVIDRASPGIVELGTVQGGSGF
Ga0099793_105175401	3300007258	Vadose Zone Soil	MPSASSPVKDALESYIAGRVKAERLVIAVSAAYYREAPNGKRETLQPLIDVIDRASPGIVELGTVQGGSGFDVRLAERPFPKQHEPELRRAAEAVLSG
Ga0066710_1012958141	3300009012	Grasslands Soil	VSSPVKDALESYVAGRVKPERLVIAISAAYYGDSTNGNRESLQPLIDVIDRASPGIVELGTATSGPGFDIRLAERPFPKQYEAQLREAAEVVLSGGGMRD
Ga0066710_1033355251	3300009012	Grasslands Soil	MSSSIRRELEGFVAGRVQAERLVIAVSAAYYRDSRNGKRETLQPLIDVIDRASPGIVELGIVPGGAGFEIRLAERPFPSQYEAELRRAAEAVLSGN
Ga0066710_1035193222	3300009012	Grasslands Soil	MSSSVRRELEGFVAGSVKAERLVIAVSAAYYRDSRNGNRETLQPLIDVIDRASPGIVELGIVPGGAGFEIRLAERPFPSQYEAELRRAAEAVLSGN
Ga0099829_101472423	3300009038	Vadose Zone Soil	MPSASSPVKDALESYVAGRVKAERLVIAVSAAYYGDARNGQRESLQPLIDVIDRASPGIVELGTAQGGSGFAISLAERPFPRQYEAELRRAAEAVLSGT
Ga0099829_101559131	3300009038	Vadose Zone Soil	VSSSVREAVESYIAGRVKAERLVVAVAAEYYRDAANGKREALQPLIDVIDRASPGIVELGTVQGGSGFAISLAERPFPKEHEAELRRAAEAVL
Ga0099828_107295762	3300009089	Vadose Zone Soil	MSAASSPVSDALASYVAGRIKSERVVITVAAAFYGARGGRERGALQPLIDVIDRASPGIVELGSVAGGVGFEIRLAERPFPRQYEAALRRAA
Ga0099828_118324232	3300009089	Vadose Zone Soil	MSAASSPVSDALASYVAGRIKSERVVITVAAAFYGAGGGRERRALQPLIDVIDRASPGIVELGSVAGGVGFEIRLAERPFPRQYEAALRRAA
Ga0099827_112190081	3300009090	Vadose Zone Soil	MPSASSPVKDVLESYVAGRVKAERLVIAVSAAYYGDSRNGQRESLQPLIDVIDRASPGIVELGTVQGGSGFAISLAERSFPKQSEPELRQAAQAYLGRVEA
Ga0099827_115557381	3300009090	Vadose Zone Soil	MPSGSSPVKETLESYVAGRVKAERLVVAVAAEYYRDARNGKRETLQPLIDVIDRASPGIVELGTVQGGSGFDVRLAERPFPKQYEAQLREA
Ga0066709_1007965932	3300009137	Grasslands Soil	VSSPVKDALESYVAGRVKPERLVIAISAAYYGDSTNGNRESLQPLIDVIDRASPGIVELGTVQGGSGFAISLAERPFPKQY
Ga0066709_1028538612	3300009137	Grasslands Soil	MPSASSRVKDALESYLAGRVKAERLVVTVAAEYYRDAANGKRETLRPLIDVIDRASPGIVELGTATGGPGFDIRLAERPFP
Ga0114129_121601091	3300009147	Populus Rhizosphere	MPSASSPVKDALEGYVAGRVKAERLVIAVSAAYYREPGNGKRETLQPLMDVIDRASPGIVELGSAHGGPGFELRLAERPFPKQYEAELRRAAEAVLSGGGMRDAGYVEAA
Ga0127451_10916231	3300010120	Grasslands Soil	MPSGFSPVKDTLEAYVAGRVKAERLVVAVAAEYYRDALNGKREMLRPLIDVIDRASPGIVELGRADGGPGFELRLVERPFPKEHEAELRRA
Ga0127499_10800191	3300010141	Grasslands Soil	MPSESSPVKEALEAYVAGRVKAERLVIAVSAAYYRDAANGKRETLQPLMDVIDRASPGIVELGRADGGPGFELRLAERPFP
Ga0134070_100491522	3300010301	Grasslands Soil	MPSGSSPVNEALEAYVAGRVKAERLVIAVSAAYYRESENGTREALQPLMDVIDRASPGIVELGTVQGGSGFDVRLAERPFPK
Ga0134070_101763731	3300010301	Grasslands Soil	MPSVSSPVKVALESYVAGRLKAERLVIAVSAEYYREARDGRREALQPLIDVIDRASPGIVELGTAPGGSGFEIRLAERP
Ga0134082_102671972	3300010303	Grasslands Soil	MSSSIRRELEGFVAGRVQAERLVIAVSAAYYRDSRNGNRETLQPLIDVIDRASPGIVELGTAAGGPGFDIRLAERPFPKQYEA
Ga0134088_104517191	3300010304	Grasslands Soil	MPSASSPVRDTLESYLAGRIKAERLVIAVAAAYYGEAGRGKREALQPLIDVIERASPGVVELGSVESGPGFGIRLAERP
Ga0134109_101146072	3300010320	Grasslands Soil	MSSSIRRELEGFVAGRVQAERLVIAVSAAYYRDSRNGNRETLQPLIDVIDRASPGIVELGTAAGGPGFDIRLAERPFPKQYEAQLR
Ga0134109_103187652	3300010320	Grasslands Soil	MPSASSPVKDALESYVAGRVKAERLVLAVSAEYYREARDGRREALQPLIDVIDRASPGIVELGTATGGTGFEIRLAERPFPKEHEAELRRAAE
Ga0134084_103548182	3300010322	Grasslands Soil	MPSGSSPVNEALEAYVAGRVKAERLVIAVSAAYYRESENGTREALQPLMDVIDRASPGIVELGTVQGGSGFDVRL
Ga0134065_104804632	3300010326	Grasslands Soil	VSSPVRDALEGYVAGRVKAERLVIAVSAAYYRDARNGQRESLQPLIDVIDRASPGIVELGTATSGPGFDIRLAERPFPKQYEAQLREAAEVVLSGGGMRDAGYVKA
Ga0134080_100997991	3300010333	Grasslands Soil	MPSVSSPVKVALESYVAGRLKAERLVIAVSAEYYREARDGRREALQPLIDVIDRASPGIVELGIATGGPGFDIRLAERPFPKQYEAQLREAAETVLSGC
Ga0134080_106042561	3300010333	Grasslands Soil	MPSASSPVKDALESYVAGRVKAERLVLAVSAEYYREARDGRREALQPLIDVIDRASPGIVELGTATGGTGFEIRLAERPFPKHYESELRRAAEAVLSGGGMRD
Ga0134080_106972392	3300010333	Grasslands Soil	VSSPVKDALESYVAGRVKPERLVIAISAAYYGDSNNGNRESLQPLIDVIDRASPGIVELGTATGGPGFDIRLAKRPFPKQHEAELREAAEAVLAGSGKRET
Ga0134071_105801762	3300010336	Grasslands Soil	MPSGSSPVNEALEAYVAGRVKAERLVIAVSAAYYRESENGTREALQPLMDVIDRASPGIVELGTVQGGSGFDVRLAERPF
Ga0134062_101490612	3300010337	Grasslands Soil	MPSASSPVKDALESYVAGRVKAERLVLAVSAEYYREARDGRREALQPLIDVIDRASPGIVELGTATGGTGFEIRL
Ga0134066_103132301	3300010364	Grasslands Soil	MPSASSPVKDALESYVAGRVKAERLVLAVSAEYYREARDGRREALQPLIDVIDRASPGIVELGTATGGTGFEIRLAERPFPKEHEAELRRAAEAVLSGCGMRDAGW
Ga0134125_106740061	3300010371	Terrestrial Soil	MPSASSPIKDTLQSYVAGRVKAERLVVAVAAEYYRDAGNGKRETLRPLIDVIDRASPGIVELGSAGGGPGFELRLAERP
Ga0134128_102579314	3300010373	Terrestrial Soil	MPSASSPVKDALESYVAGRVKAERLVVAVAAEYYRDAGNGKRETLRPLIDVIDRASPGIVELGSAGGGPGFELRLAERPFPKQYEAALRQAAEAVLAGSGKRETGNGKRGAH*
Ga0134121_124167632	3300010401	Terrestrial Soil	MPSASSPIKDTLQSYVAGRVKAERLVVAVAAEYYRDAGNGKRETLRPLIDVIDRASPGIVELGSAGGGPGFELRLAERPFPKQYEAALRQA
Ga0137393_104501851	3300011271	Vadose Zone Soil	MPSGSSPVNEALESYVAGRVKAERLVVAVAAEYYRDTRNGKRETLRPLIDVIDRASPGIVELGTVQGGSGFDVRLAERPFPKQHEPELRRAAEAVLSGCR
Ga0137389_102111392	3300012096	Vadose Zone Soil	VSSSVREAVESYIAGRVKAERLVVAVAAEYYRDAANGKREALQPLIDVIDRASPGIVELGTVQGGSGFAISLAERPFPKEHE
Ga0137389_102297742	3300012096	Vadose Zone Soil	MPSASSPVKDALESYIAGRVKAERLVIAVSAAYYREAPNGKRETLQPLIDVIDRASPGIVELGTVQGGSGFAISLAERPFPKEHE
Ga0137388_101081423	3300012189	Vadose Zone Soil	VSYVAGRVKAERLVIAVSAAYYREAANGKRETLQPLMDVIDRASPGIVELGTVQGGSGFDVRLAERPFP
Ga0137388_102273793	3300012189	Vadose Zone Soil	VSSSVREAVESYIAGRVKAERLVVAVAAEYYRDAANGKREALQPLIDVIDRASPGIVELGTVQGGSGFAISLAER
Ga0137388_115756902	3300012189	Vadose Zone Soil	VAGRVKAERLVVAVAAEYYRDTRNGKRETLRPLIDVIDRASPGIVELGTVQGGSGFDVRLAERPFPKQYEAQLREAAEAVLAGSGMLGGAADAGAQTADV
Ga0137364_111724742	3300012198	Vadose Zone Soil	MPSGSSPVKEALESYVAGRVKAERLVIAVSAAYYRQSENGTREALQPLMDVIDRASPGIVELGTVQGGSGFDVRLAE
Ga0137362_106658142	3300012205	Vadose Zone Soil	VSSPVRDALEGYVAGRVKAERLVIAVSAAYYRDARNGQRESLQPLIDVIDRASPGIVELGTATSGPGFDIRLAERPFPKQYEAQLREAA
Ga0137362_117152701	3300012205	Vadose Zone Soil	MPSGSSPVKEALEAYVAGRVKAEWLVVAVAAEYYRDTLNGKREMLRPLIDVIDRASPGIVELGTVQGGSGFDVRLAERPFPKQHEPEL
Ga0137381_109058582	3300012207	Vadose Zone Soil	MPSGSSPVKEALESYVAGRVKAERLVIAVSAAYYREAGNGKRETLQPLMDVIDRASPGIVELGTVQGGSGFDVRLAERPFPKQHEPELRRAAEAVLSGGGMRDAGWEH
Ga0137381_111094681	3300012207	Vadose Zone Soil	MPSGSYPVNEALEAYVAGRVKAERLVIAVSAAYYRESENGTREALQPLMDVIDRASPGIVELGTVQGGSGFDVRLAERPFPKQHEPELRRAAEAVLSGCEMRDAGGVKSEE
Ga0137379_110692062	3300012209	Vadose Zone Soil	MPSASSPVKDALESYVAGRVKAERLVVTVAAEYYRDSGNGKREALRPLIDVIDRASPGIVELGIARGGSGFEIRLVERPFPKQHEAELRRAAEAVLAGRGKRETGNV
Ga0137387_105089651	3300012349	Vadose Zone Soil	MPSGSYPVNEALEAYVAGRVKAERLVIAVSAAYYRESENGTREALQPLMDVIDRASPGIVELGTVQGGSGFDVRLAERPFPKQYEVQLREAAATVLSGGGM
Ga0137387_105271522	3300012349	Vadose Zone Soil	MPSESSPVKEALESYVAGRVKAERLVMAVAAEYYRDTLNGKREMLRPLIDVIDRASPGIVELGTVQGGSGFDVRLAERPFPKQHEPELRRAAEAVLSG
Ga0137386_106469031	3300012351	Vadose Zone Soil	MPSVSSPVKVALESYIAGRLKAERLVIAVSAEYYREARDGRREALQPLIDVIDRASPGIVELGIATGGPGFDI
Ga0137371_105342671	3300012356	Vadose Zone Soil	MSSSVRQELEGFVAGSVKAERLVIAVSAAYYRDSRNGNRETLQLLIDVIDRASPGIVELGIVSGGAGFEIRLAERPFPKEYEAELRR
Ga0137371_109976491	3300012356	Vadose Zone Soil	MPSVSSPVKVALESYVAGRLKAERLVIAVSAEYYREARDGRREALQPLIDVIDRASPGIVELGIATGGPGFDIRLAERPFPKQHEAELRRAAGAVLSGGGMREAGGV
Ga0137384_101646031	3300012357	Vadose Zone Soil	MSSSVRQELEGFVAGSVKAERLVIAVSAEYYRDSRNGNRETLQPLIDVIDRASPGIVELGIVSGGAGFEIRLAERPFPKEYEAELRRAAEAV
Ga0137384_102172232	3300012357	Vadose Zone Soil	MRSAVSEAVTGFLEGRVKPEHVVIAVAAEYYRDSRNGNRETLQPLIDVIDRASPGIVELGIVSGGAGFEIRLAERPFPKEYEAELRRAAEAV
Ga0134055_12478112	3300012401	Grasslands Soil	VAGRVKAERLVVAVAAEYYRDTLNEKREMLRPLIDVIDRASPGIVELGTVQGGSGFDVRLAERPFPKQHEPELRRAAEAVLSGGGMRHAGWEHDSEA
Ga0134050_12218921	3300012407	Grasslands Soil	MPSGFSPVKEALEAYVAGRVKAERLVVAVAAEYYRDALNGKREMLRPLIDVIDRASPGIVELGTVQGGSGFDVRLAERPFPKQHEPELRRAAEAVL
Ga0137358_100589493	3300012582	Vadose Zone Soil	MPSASSPVKDALESYIAGRVKAERLVIAVSAAYYREAPNGKRETLQPLIDVIDRASPGIVELATVQGGSGFDVRLAERPFPKQHEPELRRAAEAVLSGCEMRDAG
Ga0137404_101700243	3300012929	Vadose Zone Soil	MPSASSPVKDALESYVAGRVKAERLVIAVSAAYYGNARNGQRESLQPLIDVIDRASPGIVELGTAQGGSGFAISLAERPFPRQYEAELRQAAEAVLSGTGVFGGATDV
Ga0137407_107422022	3300012930	Vadose Zone Soil	MPSASSPVKDALESYVAGRVKAERLVIAVSAAYYGDAKNGQRKSLQTLIDVIDRASPGIVELGTATGGPGFDIRLAER
Ga0153915_130305311	3300012931	Freshwater Wetlands	MSSGSSLVKDVLESYVAGRVRAERLVITVTAAYYGGQAGGGAGDGLRPLIDVIDRASPGIVELGTVQGGAGFDIRLAERPFPKRYEAELRRAAEAYLAEPTRRGTSDERPVEPVPEPG
Ga0134076_106205281	3300012976	Grasslands Soil	VAGRVKAERLVVAVAAEYYRDARNGKRETLQPLIDVIDRASPGIVELGTVQGGSGFDVRLAERPFPKQYEAQLREAAATVLSGGGMRGGATD
Ga0134075_100972001	3300014154	Grasslands Soil	MPSASSPVKDALESYIAGRVKAERLVIAVSAAYYRDAPNGKRETLQPLIDVIDRASPGIVELGTVQGGSGFAISLAERPFPKEHEAELRRAAEAVLSGGGMVEAATGPSSGM
Ga0134078_100057251	3300014157	Grasslands Soil	MPSVSSPVKVALESYVAGRLKAERLVIAVSAEYYREARDGRREALQPLIDVIDRASPGIVELGTATGGPGFDIRLAERPFPKQYETQLREA
Ga0134073_100141253	3300015356	Grasslands Soil	MPSVSSPVRVALESYVAGRLKAERLVIAVSAEYYREARDGRREALQPLIDVIDRASPGIVELGTATGGPGFDIRLAERPFPKQHEAELRRAAEAVLSGGGMREAGGV
Ga0134073_104013761	3300015356	Grasslands Soil	VAGRVKPERLVIAISAAYYGDSTNGNRESLQPLIDVIDRASPGIVELGTVQGGSGFAISLAERPFPKQYEAELRRAAEAVLRGTGVFGGATDVGRSMLRPYRMPNRLRV*
Ga0134069_10342232	3300017654	Grasslands Soil	VAGRVNAERLVITVTSAYYGRDGGRGTRDGLGPVIEVIDRASPGIVELGTVQGGAGFEVRLAERPFPKQWEGELRRAAEAVLHAGE
Ga0134112_101118892	3300017656	Grasslands Soil	MPSASSPVKDALESYVAGRVKAELLVIAVSAAYYGDTRNGKRESLQPLIDVIDRASPGIVELGTATGGPGFDIRLAE
Ga0134112_104677222	3300017656	Grasslands Soil	MPSASSPVKDALESYIAGRVKAERLVIAVSAAYYRDAPNGKRETLQPLIDVIDRASPGIVELGTVQGGSGFAI
Ga0134074_10127001	3300017657	Grasslands Soil	MPSGSSPVNEALEAYVAGRVKAERLVIAVSAAYYRESENGTREALQPLMDVIDRASPGIVELGTVQGGSGFDVRLAERPFPKQYEAQLREAAATVLSGGG
Ga0134074_13566961	3300017657	Grasslands Soil	MSSSIRRELEGFVAGRVQAERLVIAVAAEYYQEPGNGKRETLRPIIDVIDRASPGIVELGIVPGGAGFEIRLAERP
Ga0134083_100799112	3300017659	Grasslands Soil	MPSGSSPVNEALEAYVAGRVKAERLVIAVSAAYYRESENGTREALQPLMDVIDRASPGIVELGTVQGGSGFAINLSERPFPKQHEAELR
Ga0066655_103372752	3300018431	Grasslands Soil	LDSSRISDALESYVAGRLKAERLVIAISAAYYGDSNNGNRESLQPLIDVIDRASPGIVELGTATGGTGFEIRLAERPFPKQHEAELREAAEAVLAGSGKRETGNV
Ga0066667_100641561	3300018433	Grasslands Soil	MPSASSRVKDALESYLAGRVKAERLVVTVAAEYYRDAANGKRETLRPLIDVIDRASPGIVELGTATGGPGFDIR
Ga0066667_123087741	3300018433	Grasslands Soil	MPSVSSPVKVALESYVAGRLKAERLVIAVSAEYYREARDGRREALQPLIDVIDRASPGIVELGTAPGGSGFEIRLAERPFPKQYQAELRRAAEAVLSGGGMRD
Ga0066662_110467531	3300018468	Grasslands Soil	MRSAVSEAVTGFLEGRVKPEHVVIAVAAEYYRDSRNGNRETLQPLIDVIDRASPGIVELGIVSGGAGFEIRLAERPFPRQYEPELRRAAEAVLSGGGMRDAG
Ga0066662_119217792	3300018468	Grasslands Soil	VSSPVKDALESYVAGRVKPERLVIAISAAYYGDSTNGNRESLQPLIDVIDRASPGIVELGTATSGPGFDIRLAERPFPKQYEAQLREAAEVVLSGGGMRDAGYVKAVE
Ga0066669_104651092	3300018482	Grasslands Soil	VSSPVRDALEGYVAGRVKAERLVIAVSAAYYRDARNGQRESLQPLIDVIDRASPGIVELGTATSGPGFDIRLAER
Ga0066669_112407601	3300018482	Grasslands Soil	MPSVSSPVKDALESYVAGRVKAERLVVTVAAEYYRDTGNGKRETLRPLIDVIDRASPGIVELGIAQGGSGFEVRLVERPFPKQHEAE
Ga0184642_12784501	3300019279	Groundwater Sediment	MRSGFSPARDALESYLAGRIKPERLVIAVASEYYGGAGKGEREALQSVIEVIDRASPGIVELGTATDGPGFDIRLAERPFPKQHEAELKRAAEAVLSRC
Ga0137408_12038042	3300019789	Vadose Zone Soil	MPSASFPVRDALESYVAGRVKAERLVIAVSAAYYGDTRNGKRESLQPLIDVIDRASPGIVELGTLQGGSGFEIRLAERPFPKQHEA
Ga0210382_104008931	3300021080	Groundwater Sediment	MPSASSPVKDALESYVAGRVKAERLVIAVSAAYYGDARNGQRESLQPLIDVIDRASPGIVELGTAQGGSGFAISLAERPFPKQY
Ga0210408_113235951	3300021178	Soil	MPSASSPVKDALESYIAGRVKAERLVIAVSAAYYREAPNGKRETLQPLIDVIDRASPGIVELGTVQGGSGFDVRLAERPFPKQHEPELRRAA
Ga0207653_100060525	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MPSASSPVKDALESYVAGRVKAERLVVAVAAEYYRDAGNGKRETLRPLIDVIDRASPGIVELGSAGGGPGFELRLAERPFPKQYEAALRQAAEAVLAGSGKREMRNV
Ga0207684_116907331	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPSGSSPVKEALESYVAGRVKAERLVVAVASEFYGDAGCGMRDALRPLIEVIDRASPGVVELGTLPGGAGFEVRLAERSFPKQHEAELRRAAEAVLSGGGMRDAGYVK
Ga0209237_11383991	3300026297	Grasslands Soil	MPSESSPVKEALESYVAGRVKAERLVVAVAAEYYRDALNPKGLPNGRGKREMLRPLIDVIDRASPGIVELGTVQGGSGFDVRLAERPFP
Ga0209236_10240694	3300026298	Grasslands Soil	VSSSVREAVESYIAGRVKAERLVVAVAAEYYRDAANGKREALQPLIDVIDRASPGIVELGTVQGGSGFAISLAERPFPKEHEAEL
Ga0209236_11748793	3300026298	Grasslands Soil	MPSVSSPVKDALESYVAGRLRAERLVVTVAAEYYRDARNGKRETLRPLIDVIDRASPGIVELGTVQGGSGFAISLAERPFPKQYEA
Ga0209238_10372793	3300026301	Grasslands Soil	VSSPVKEALESYLAGRVKAERLVIAISAEYYREARDGRRDALQPLIDVIDRASPGIVELGTATGGPGFDIRLAERPFPKQYEAELRR
Ga0209265_10430641	3300026308	Soil	MSSSIRRELEGFVAGRVQAERLVIAVSAAYYRDSRNGNRETLQPLIDVIDRASPGIVELGTAAGGPGFDIRLAERPFPKQYEAQLREAAETVLSGCGMRD
Ga0209761_13010611	3300026313	Grasslands Soil	VSSPVRDALESYVAGRVKPERFVIAISAAYYGDSTNGNRESLQPLIDVIDRASPGIVELGTVQGGSGFAISLAERPFPKQYEAELRR
Ga0209472_10065868	3300026323	Soil	VSSPVSDALEGYVAGRVKAERLVIAVSAAYYRDARNGQRESLQPLIDVIDRASPGIVELGTATSGPGFDIRLAERPFPKQYEAQLREAAEVVLSGGVMRDAGYVKAVETT
Ga0209472_10985852	3300026323	Soil	MSSSIRGELEGFVAGRVQAERLVIAVAAEYYRETRNGKRETLRPIIDVIDRASPGIVELGIVPGGAGFEIRLAERP
Ga0209152_103841001	3300026325	Soil	MPSVSSPVKVALESYVAGRLKAERLVIAVSAEYYREARDGRREALQPLIDVIDRASPGIVELGTAPGGSGFEIRLAERPFPKQYQAE
Ga0209266_11466992	3300026327	Soil	MPSGFSPVKEALEAYVAGRVKAERLVVAVAAEYYRDALNGKREMLRPLIDVIDRASPGIVELGTVQGGSGFDVRLAERPFPKQHEPELRRAAEAVLS
Ga0209473_10590211	3300026330	Soil	MPSVSSPVKVALESYVAGRLKAERLVIAVSAEYYREARDGRREALQPLIDVIDRASPGIVELGTAPGGSGFEIRLAERPFPKQYEA
Ga0209804_12533061	3300026335	Soil	MPSGFSPVREALEAYVAGRVKAERVVVAVAAEYYRDALNPKGLPNGRGKREMLRPLIDVIDRASPGIVELGRADGGPGFELRLVERPFP
Ga0209159_10878312	3300026343	Soil	MPSASSPVKDALESYVAGRVKAERLVLAVSAEYYREARDGRREALQPLIDVIDRASPGIVELGTATGG
Ga0209159_11728791	3300026343	Soil	MPSVSSPVKVALESYVAGRLKAERLVIAVSAEYYREARDGRREALQPLIDVIDRASPGIVELGIATGGPGFDIRLAERPFPKQYEAQLREAAETVLSGCGM
Ga0209160_12243081	3300026532	Soil	VSSPVKEALESYVAGRLKAERLVIAVAAAYYGEQGAGSRQQLQPLIEVIDRASPGIVELGRVEATPGFELRLGERPFPKQYEADLRRAAEAC
Ga0209058_10575351	3300026536	Soil	MPSVSSPVKVALESYVAGRLKAERLVIAVSAEYYREARDGRREALQPLIDVIDRASPGIVELGTATGGPGFDIRLAERPFPKQYEAQLREAAETVLSGCGMRDAGWDHD
Ga0209157_10947451	3300026537	Soil	LDSSRISDALESYVAGRLKAERLVIAISAAYYGDSNNGNRESLQPLIDVIDRASPGIVELGTATGGPGFDIRLAKRPFPKQ
Ga0209376_11763661	3300026540	Soil	MPSASSHVKDALESYLAGRVKAERLVVTIAAEYYRDAGNGKRETLQPLMDVIDRVSPGVVELGTAAGGAGFDIRLAKRPFPKQYEAQLREAAEAVLSGGGRREAGFGK
Ga0209648_102296901	3300026551	Grasslands Soil	MPSASSPVKDALEGYIAGRVKAERLVIAVSAAYYREAPNGKRQMLQPLIDVIDRASPGIVELGTVQGGSGFAISLAERPFPKEHEAELRRAAEAVLGREEALA
Ga0179587_100663313	3300026557	Vadose Zone Soil	MPSASSPVRDALESYVAGRVKAERLVIAVSAAYYGDARNGQRESLQPLIDVIDRASPGIVELGTAQGGSGFAISLAERPFPKQYEAALR
Ga0208991_10720662	3300027681	Forest Soil	MPSGSSPVRDALESYLAGRVKAERLVIAVSTEYYREARDGRREALQPLIDVIDRASPGIVELGTVQGGSGFDVRLAERRLHLRPRGSTL
Ga0209180_104428252	3300027846	Vadose Zone Soil	MPSGSSPVKEALEAYVAGRGKAERLVVAVAAEYYRDTRNGKRETLRPLIDVIDRASPGIVELGTVQGGSGFDVRLAERPFP
Ga0209283_100678281	3300027875	Vadose Zone Soil	MSAASSPVSDALASYVAGRIKSERVVIAVAAAFYGARGGRERGALQPLIDVIDRASPGIVELGSVAGGVGFEIRLAERPFPRQYEAALRRAAELVLAASGGHAPG
Ga0209283_103560181	3300027875	Vadose Zone Soil	MPSASSPVKDALESYIAGRVKAERLVIAVSAAYYREAPNGKRETLQPLIDVIDRASPGIVELGTVQGGSGFAISLAERPFPKEHEA
Ga0307504_101855062	3300028792	Soil	MPSASSPVKDALESYVAGRVQAERLVIAVSAAYYGDARNGQRESLQPLIDVIDRASPGIVELGTAQGGSGFAISLAERPFPRQYEAELRRAAEAVL
Ga0307312_102487152	3300028828	Soil	MRSGFSPAKDALESYLAGRIKPERLVIAVATEYYGAAGRGKREALQPVIEVIDRASPGIVELGTATDGPGFDIRLAERPFPKRHEAELKRAAEAVLSRCGMRDAGGVQHAE
Ga0307469_104530031	3300031720	Hardwood Forest Soil	MPSASSPVKDALESYVAGRVKAERLVVAVAAEYYRDAGNGKRETLRPLIDVIDRASPGIVELGTVQGGSGFDVRLAERPFPKQYEAQLREA
Ga0307468_1022556601	3300031740	Hardwood Forest Soil	VAVAAEYYRDAGNGKRETLRPLIDVIDRASPGIVELGTVQGGSGFAISLAERPFPKEHEAELRRAAEAVL
Ga0307472_1011173031	3300032205	Hardwood Forest Soil	MPSASSPVKDALESYVAGRVKAERLVVAVAAEYYRDAGNGKRETLRPLIDVIDRASPGIVELGSATGGPGFELRLAERPFPKQYEAALRQAAEAVLAGSGRREMRN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F043517

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences