NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F043810

Metagenome Family F043810

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F043810
Family Type Metagenome
Number of Sequences 155
Average Sequence Length 68 residues
Representative Sequence NSKEIDVVLDIRRNFAGDWTLNTRAQYEKVDATKVKFVVPLKPREKQKFTYELTTRLGTNATR
Number of Associated Samples 124
Number of Associated Scaffolds 155

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 3.57 %
% of genes near scaffold ends (potentially truncated) 70.32 %
% of genes from short scaffolds (< 2000 bps) 64.52 %
Associated GOLD sequencing projects 117
AlphaFold2 3D model prediction Yes
3D model pTM-score0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (65.806 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil
(7.097 % of family members)
Environment Ontology (ENVO) Unclassified
(29.677 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(23.226 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 35.16%    Coil/Unstructured: 64.84%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.56
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 155 Family Scaffolds
PF13174TPR_6 6.45
PF13598DUF4139 3.23
PF13424TPR_12 1.94
PF13432TPR_16 1.29
PF13460NAD_binding_10 1.29
PF01370Epimerase 1.29
PF00756Esterase 0.65
PF07578LAB_N 0.65
PF07691PA14 0.65
PF04430DUF498 0.65
PF12705PDDEXK_1 0.65
PF03781FGE-sulfatase 0.65
PF13565HTH_32 0.65
PF13360PQQ_2 0.65
PF01262AlaDh_PNT_C 0.65
PF00830Ribosomal_L28 0.65
PF06925MGDG_synth 0.65
PF00722Glyco_hydro_16 0.65
PF06685DUF1186 0.65
PF01408GFO_IDH_MocA 0.65
PF02638GHL10 0.65
PF02749QRPTase_N 0.65
PF03721UDPG_MGDP_dh_N 0.65
PF01904DUF72 0.65
PF04371PAD_porph 0.65
PF02595Gly_kinase 0.65
PF01986DUF123 0.65
PF07730HisKA_3 0.65
PF00216Bac_DNA_binding 0.65
PF07394DUF1501 0.65

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 155 Family Scaffolds
COG0157Nicotinate-nucleotide pyrophosphorylaseCoenzyme transport and metabolism [H] 0.65
COG0227Ribosomal protein L28Translation, ribosomal structure and biogenesis [J] 0.65
COG0240Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 0.65
COG0677UDP-N-acetyl-D-mannosaminuronate dehydrogenaseCell wall/membrane/envelope biogenesis [M] 0.65
COG0707UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferaseCell wall/membrane/envelope biogenesis [M] 0.65
COG0776Bacterial nucleoid DNA-binding protein IHF-alphaReplication, recombination and repair [L] 0.65
COG1004UDP-glucose 6-dehydrogenaseCell wall/membrane/envelope biogenesis [M] 0.65
COG12503-hydroxyacyl-CoA dehydrogenaseLipid transport and metabolism [I] 0.65
COG1262Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domainPosttranslational modification, protein turnover, chaperones [O] 0.65
COG1488Nicotinic acid phosphoribosyltransferaseCoenzyme transport and metabolism [H] 0.65
COG1504Uncharacterized conserved protein, DUF498 domainFunction unknown [S] 0.65
COG1649Uncharacterized lipoprotein YddW, UPF0748 familyFunction unknown [S] 0.65
COG1801Sugar isomerase-related protein YecE, UPF0759/DUF72 familyGeneral function prediction only [R] 0.65
COG1833Uri superfamily endonucleaseGeneral function prediction only [R] 0.65
COG1893Ketopantoate reductaseCoenzyme transport and metabolism [H] 0.65
COG1929Glycerate kinaseCarbohydrate transport and metabolism [G] 0.65
COG2273Beta-glucanase, GH16 familyCarbohydrate transport and metabolism [G] 0.65
COG2957Agmatine/peptidylarginine deiminaseAmino acid transport and metabolism [E] 0.65
COG3737Uncharacterized protein, contains Mth938-like domainFunction unknown [S] 0.65
COG3850Signal transduction histidine kinase NarQ, nitrate/nitrite-specificSignal transduction mechanisms [T] 0.65
COG3851Signal transduction histidine kinase UhpB, glucose-6-phosphate specificSignal transduction mechanisms [T] 0.65
COG3952Uncharacterized N-terminal domain of lipid-A-disaccharide synthaseGeneral function prediction only [R] 0.65
COG4564Signal transduction histidine kinaseSignal transduction mechanisms [T] 0.65
COG4585Signal transduction histidine kinase ComPSignal transduction mechanisms [T] 0.65

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms65.81 %
UnclassifiedrootN/A34.19 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2088090007|LWFCAnN_GO09JKT01C04O5All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium529Open in IMG/M
3300000033|ICChiseqgaiiDRAFT_c2249206All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia508Open in IMG/M
3300000559|F14TC_105811626All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia548Open in IMG/M
3300001213|JGIcombinedJ13530_103905473All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia538Open in IMG/M
3300001213|JGIcombinedJ13530_105478687Not Available506Open in IMG/M
3300001213|JGIcombinedJ13530_105954212All Organisms → cellular organisms → Bacteria1188Open in IMG/M
3300001213|JGIcombinedJ13530_107518734All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia660Open in IMG/M
3300001213|JGIcombinedJ13530_109060724All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia626Open in IMG/M
3300003319|soilL2_10274027All Organisms → cellular organisms → Bacteria1637Open in IMG/M
3300003541|JGI20214J51650_11267296All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia510Open in IMG/M
3300004080|Ga0062385_10444322All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia786Open in IMG/M
3300004156|Ga0062589_102078607All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia578Open in IMG/M
3300005330|Ga0070690_101579006All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia531Open in IMG/M
3300005333|Ga0070677_10657048All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia586Open in IMG/M
3300005440|Ga0070705_100643115All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia826Open in IMG/M
3300005441|Ga0070700_101929557All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia511Open in IMG/M
3300005445|Ga0070708_101902849All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia551Open in IMG/M
3300005526|Ga0073909_10357381All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera678Open in IMG/M
3300005545|Ga0070695_101661630All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia534Open in IMG/M
3300005841|Ga0068863_102574106All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300006046|Ga0066652_100642893All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1005Open in IMG/M
3300006845|Ga0075421_100809357All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1078Open in IMG/M
3300006847|Ga0075431_102185973All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia508Open in IMG/M
3300006871|Ga0075434_100899220All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia900Open in IMG/M
3300006894|Ga0079215_11251187Not Available569Open in IMG/M
3300006894|Ga0079215_11623734All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia515Open in IMG/M
3300007004|Ga0079218_12596612All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia601Open in IMG/M
3300007072|Ga0073932_1011138All Organisms → cellular organisms → Bacteria7538Open in IMG/M
3300007072|Ga0073932_1120888All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1136Open in IMG/M
3300009083|Ga0105047_10038564All Organisms → cellular organisms → Bacteria6864Open in IMG/M
3300009091|Ga0102851_11294101All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia806Open in IMG/M
3300009094|Ga0111539_11140071All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia906Open in IMG/M
3300009094|Ga0111539_12895446All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia555Open in IMG/M
3300009111|Ga0115026_11772751Not Available522Open in IMG/M
3300009167|Ga0113563_11072172All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi931Open in IMG/M
3300009167|Ga0113563_11366712All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia830Open in IMG/M
3300009176|Ga0105242_11472357All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia711Open in IMG/M
3300009502|Ga0114951_10146274All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1304Open in IMG/M
3300009678|Ga0105252_10469630All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia579Open in IMG/M
3300009838|Ga0116153_10371027All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia585Open in IMG/M
3300010166|Ga0126306_11212650All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia620Open in IMG/M
3300010341|Ga0074045_10496162All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia785Open in IMG/M
3300010373|Ga0134128_11027475All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia911Open in IMG/M
3300010401|Ga0134121_11113035All Organisms → cellular organisms → Bacteria → Proteobacteria783Open in IMG/M
3300010403|Ga0134123_10710518All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium984Open in IMG/M
3300010403|Ga0134123_10771634All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia950Open in IMG/M
3300010412|Ga0136852_12250201All Organisms → cellular organisms → Bacteria → PVC group510Open in IMG/M
3300010429|Ga0116241_10141478All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2035Open in IMG/M
3300011415|Ga0137325_1140107All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia554Open in IMG/M
3300011417|Ga0137326_1022598All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1349Open in IMG/M
3300011423|Ga0137436_1166477All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia586Open in IMG/M
3300012038|Ga0137431_1125517All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia727Open in IMG/M
3300012122|Ga0137332_1048148All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia505Open in IMG/M
3300012175|Ga0137321_1005155All Organisms → cellular organisms → Bacteria2403Open in IMG/M
3300012232|Ga0137435_1201423All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia610Open in IMG/M
3300012530|Ga0136635_10234400All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia636Open in IMG/M
3300013088|Ga0163200_1173428Not Available667Open in IMG/M
3300013297|Ga0157378_12454069All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia573Open in IMG/M
3300013307|Ga0157372_11831482All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales698Open in IMG/M
3300013308|Ga0157375_13809891Not Available500Open in IMG/M
3300014496|Ga0182011_10589413All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia708Open in IMG/M
3300014502|Ga0182021_12894968Not Available576Open in IMG/M
3300014839|Ga0182027_12075939All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia542Open in IMG/M
3300014839|Ga0182027_12289015All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia511Open in IMG/M
3300015373|Ga0132257_103021259All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium613Open in IMG/M
3300018072|Ga0184635_10302843Not Available625Open in IMG/M
3300019884|Ga0193741_1007029All Organisms → cellular organisms → Bacteria2993Open in IMG/M
3300020193|Ga0194131_10013431All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia9308Open in IMG/M
3300021339|Ga0193706_1058573All Organisms → cellular organisms → Bacteria → PVC group1070Open in IMG/M
3300021418|Ga0193695_1044360All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium965Open in IMG/M
3300021602|Ga0194060_10333302All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia742Open in IMG/M
3300022554|Ga0212093_1011019All Organisms → cellular organisms → Bacteria → Proteobacteria8755Open in IMG/M
3300022555|Ga0212088_10113681All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2427Open in IMG/M
3300022555|Ga0212088_10587981All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia690Open in IMG/M
3300022555|Ga0212088_10744821All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium575Open in IMG/M
3300022555|Ga0212088_10752021All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium571Open in IMG/M
(restricted) 3300023208|Ga0233424_10000492All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia49042Open in IMG/M
(restricted) 3300023208|Ga0233424_10000657All Organisms → cellular organisms → Bacteria40328Open in IMG/M
3300024330|Ga0137417_1349547All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2930Open in IMG/M
3300025162|Ga0209083_1085052All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1282Open in IMG/M
3300025162|Ga0209083_1155864All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia873Open in IMG/M
3300025476|Ga0208495_1081992All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300025893|Ga0207682_10300024All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia753Open in IMG/M
3300025972|Ga0207668_11330575All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia647Open in IMG/M
3300025972|Ga0207668_11559912All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia596Open in IMG/M
3300026088|Ga0207641_11618605All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia649Open in IMG/M
3300026320|Ga0209131_1363417All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia538Open in IMG/M
3300026357|Ga0256810_1062851All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia533Open in IMG/M
3300027821|Ga0209811_10234639All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera698Open in IMG/M
3300028283|Ga0268283_1141305All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin118677Open in IMG/M
3300029957|Ga0265324_10257572All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium593Open in IMG/M
3300031740|Ga0307468_101189978All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia686Open in IMG/M
3300032002|Ga0307416_103845247All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia503Open in IMG/M
3300032018|Ga0315272_10319784All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia756Open in IMG/M
3300032018|Ga0315272_10457320All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300032164|Ga0315283_12401301Not Available513Open in IMG/M
3300032256|Ga0315271_10497062All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1034Open in IMG/M
3300032397|Ga0315287_12393866All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia570Open in IMG/M
3300032401|Ga0315275_10179194All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2359Open in IMG/M
3300032401|Ga0315275_11314845Not Available783Open in IMG/M
3300032401|Ga0315275_12798617Not Available500Open in IMG/M
3300032605|Ga0316232_1076709All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1566Open in IMG/M
3300032668|Ga0316230_1147567All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia879Open in IMG/M
3300033233|Ga0334722_10127751All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1914Open in IMG/M
3300033414|Ga0316619_10218387All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1389Open in IMG/M
3300033416|Ga0316622_102851124All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia553Open in IMG/M
3300033482|Ga0316627_101526518All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia677Open in IMG/M
3300033486|Ga0316624_11175267All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia697Open in IMG/M
3300033487|Ga0316630_10407566All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1087Open in IMG/M
3300033513|Ga0316628_102368958All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia702Open in IMG/M
3300033521|Ga0316616_102055922All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia758Open in IMG/M
3300034148|Ga0364927_0134845All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia703Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment7.10%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil7.10%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland6.45%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil5.16%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.52%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater3.23%
Freshwater Lake HypolimnionEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion3.23%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.23%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil3.23%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.23%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.87%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater2.58%
Hot Spring SedimentEnvironmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment2.58%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.58%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen2.58%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.58%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.58%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands1.94%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere1.94%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland1.29%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater1.29%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.29%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.29%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.29%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.29%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.29%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.29%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.29%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.29%
Anaerobic Digestor SludgeEngineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge1.29%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater0.65%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Sediment0.65%
Anoxic Zone FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater0.65%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.65%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.65%
SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment0.65%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand0.65%
FreshwaterEnvironmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater0.65%
Saline WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water0.65%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.65%
Mangrove SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment0.65%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.65%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.65%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.65%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.65%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.65%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.65%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog0.65%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.65%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.65%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.65%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.65%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.65%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.65%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.65%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2088090007Freshwater sediment microbial communities from Lake Washington, Seattle, for methane and nitrogen Cycles - from flow sorted anaerobic plus nitrateEnvironmentalOpen in IMG/M
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300003319Sugarcane bulk soil Sample L2EnvironmentalOpen in IMG/M
3300003541Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 BulkEnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300007072Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Dewar Creek DC9 2012 metaGEnvironmentalOpen in IMG/M
3300009083Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-04 (megahit assembly)EnvironmentalOpen in IMG/M
3300009091Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009111Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009167Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)EnvironmentalOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009179Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1EnvironmentalOpen in IMG/M
3300009502Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaGEnvironmentalOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009678Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100EnvironmentalOpen in IMG/M
3300009838Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC028_MetaGEngineeredOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300010412Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_10EnvironmentalOpen in IMG/M
3300010429AD_USRAcaEngineeredOpen in IMG/M
3300011415Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT469_2EnvironmentalOpen in IMG/M
3300011417Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2EnvironmentalOpen in IMG/M
3300011423Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2EnvironmentalOpen in IMG/M
3300012038Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT800_2EnvironmentalOpen in IMG/M
3300012122Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT200_2EnvironmentalOpen in IMG/M
3300012175Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT399_2EnvironmentalOpen in IMG/M
3300012232Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2EnvironmentalOpen in IMG/M
3300012530Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)EnvironmentalOpen in IMG/M
3300013087Freshwater microbial communities from Lake Malawi, Central Region, Malawi to study Microbial Dark Matter (Phase II) - Malawi_45m_30LEnvironmentalOpen in IMG/M
3300013088Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_200mEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014496Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaGEnvironmentalOpen in IMG/M
3300014502Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014839Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300019884Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2EnvironmentalOpen in IMG/M
3300020193Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015053 Kigoma Offshore 120mEnvironmentalOpen in IMG/M
3300021339Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c1EnvironmentalOpen in IMG/M
3300021418Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2EnvironmentalOpen in IMG/M
3300021602Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L222-5mEnvironmentalOpen in IMG/M
3300022554Dewar_combined assemblyEnvironmentalOpen in IMG/M
3300022555Alinen_combined assemblyEnvironmentalOpen in IMG/M
3300023208 (restricted)Freshwater microbial communities from Lake Towuti, South Sulawesi, Indonesia - Watercolumn_Towuti2014_125_MGEnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025162Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025307Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_150m (SPAdes)EnvironmentalOpen in IMG/M
3300025316Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025476Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA14M (SPAdes)EnvironmentalOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026357Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 PU5EnvironmentalOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027887Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 BulkEnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028283Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2013_06_06_36mEnvironmentalOpen in IMG/M
3300029957Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaGHost-AssociatedOpen in IMG/M
3300031232Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3EnvironmentalOpen in IMG/M
3300031524Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3EnvironmentalOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032018Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middleEnvironmentalOpen in IMG/M
3300032144Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soilEnvironmentalOpen in IMG/M
3300032164Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0EnvironmentalOpen in IMG/M
3300032256Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_topEnvironmentalOpen in IMG/M
3300032342Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0EnvironmentalOpen in IMG/M
3300032397Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0EnvironmentalOpen in IMG/M
3300032401Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0EnvironmentalOpen in IMG/M
3300032516Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0EnvironmentalOpen in IMG/M
3300032605Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18025_13EnvironmentalOpen in IMG/M
3300032668Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18025EnvironmentalOpen in IMG/M
3300033233Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottomEnvironmentalOpen in IMG/M
3300033414Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_BEnvironmentalOpen in IMG/M
3300033416Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_CEnvironmentalOpen in IMG/M
3300033481Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CTEnvironmentalOpen in IMG/M
3300033482Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_CEnvironmentalOpen in IMG/M
3300033486Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_AEnvironmentalOpen in IMG/M
3300033487Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_AEnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M
3300033521Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_BEnvironmentalOpen in IMG/M
3300033557Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_BEnvironmentalOpen in IMG/M
3300034148Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
LWFCAnN_092285902088090007Freshwater SedimentKETWQFELQNSKEIDVTLDIRRNFPGDWDLKTDAPHENVDAHKVKFVLPLTSRAKQKFTYELTTRLGTNATK
ICChiseqgaiiDRAFT_224920613300000033SoilIPVVVDIRRNFSGDWGLTTQQKYENVDNTKVKFVIPLAPRAKQKFTYELVTRHGTNATR*
F14TC_10581162613300000559SoilEIEVQNSKDIPXXLDIRRNFPGDWTLTTAAKYENVDKTKVKFIVPLAPRAKEKLRYEL
JGIcombinedJ13530_10267492113300001213WetlandDGNGNVKGWTVKETWEFEVQNSREIEVVLDVRRNFSGDWSLSTAAQYEKVDANKIKFVVPLNPREQKSFTYELTTRYGANATR*
JGIcombinedJ13530_10390547313300001213WetlandQNSKDIDAVLDVRRNFAGDWSLKTDTAYEKVDANKVKFLLPLTARERRQFHYEATTNFGSNATR*
JGIcombinedJ13530_10466267123300001213WetlandGNDPEVLIKPTLIDWQKSNIKFDQNDSVGGWTLKQTWQFEVQNSKEIEVVLDIRRNFSGDWDLESKADYTKVDANSVKFVVPLKPHEKRTFTYDLTTRFGLNVTR*
JGIcombinedJ13530_10547868713300001213WetlandVTVDVRRNQPGDWSLETKAAYEKVDAYKLKFLLPLAPRSQQKFAYQITTRYGSNVTR*
JGIcombinedJ13530_10595421233300001213WetlandEIDVVLDVRRNFSGDWSLKTDANYEKVDANKVKFVLPLKAHEKRQFSYDLTTNFGSNATR
JGIcombinedJ13530_10651618413300001213WetlandVRETWRVEVQNSKEIGAVLDVRRNFAGDWSLKADAVYEKVDANQVKFVLALKAREKRQFIYDLTANFGSNVTR*
JGIcombinedJ13530_10751873423300001213WetlandQWHQVNGWTIKETWRFEVQNSKEIPIVLDIRRNFQGDWDLETDAERQKVDANQVKFIAPLKPREKRTFDYQLTTRFGVSVTR*
JGIcombinedJ13530_10906072423300001213WetlandQNSKDIDVMLDVRRNFNGDWSVTTEAGYEKVDANKVKFLLPLKPRAKQAFAYEVTTRFGTNATR*
soilL2_1027402723300003319Sugarcane Root And Bulk SoilVRETWQLELQNSKTIDVVVDVRRNFAGDWSLETTAERENVDANKIKFLVPLKAGQSRTFSYTLTTRLGTSARR*
JGI20214J51650_1126729613300003541WetlandQGWTVTETWHVEVQNSKDIDVVLDFRRNFSGDWSIKTETRYDKVDANKVKFILPLKPHEKQQFNFEVATHYGSNATR*
Ga0062385_1044432223300004080Bog Forest SoilQNSRDIDVVLDIRRNFGGDWSVVTDAPHEKVDANKVKFIVPLKPREKQTFTYELTTRNGVNVTR*
Ga0062589_10207860713300004156SoilTFPGDWTLATRAQYEGIDATKVKFILSLQPREKQKFSYELVTRHGTNATR*
Ga0062590_10111239913300004157SoilEVMVKPTLINWIKTDMQFDQYGNVKGWTIKETWEMEVQNSKEIDVVLDIRRNFAGDWTLNTRAQYEKVDATKVKFVVPLKPREKQKFTYELTTRLGTNATR*
Ga0062592_10176984413300004480SoilQFDQYGNVKGWTIKETWEVEVQNSKEIDVVLDIRRNFAGDWTLNTRAQYEKVDATKVKFVVPLKPREKQKFTYELTTRLGTNATR*
Ga0062591_10056537813300004643SoilANWVKTDLRFDVHGNVIGWTTKETWEIEVQNSKEIDVTLDIRRNFSGDWTLNTRAQYENVDATKVKFVVPLKPREKQKFSYELTTRYGTNATR*
Ga0065705_1087327513300005294Switchgrass RhizosphereELGHDPEVLVKPTLANWVKTDLAFDNSGNVKGWTTKETWTFEVQNSKDIDVVLDIRRNFQGDWSLTTRADYEKVDATKVKFVMPLKPREKKQFSYELTVKHGTNATK*
Ga0065707_1041874123300005295Switchgrass RhizosphereAFDQNGNVKGWTIKESWEIEVQNSKDIPVVLDIRRNFTGDWTLTTQQKYDNVDKTKVKFVVPLAPRAKQKFGYEVVTRYGTNATR*
Ga0065707_1113701813300005295Switchgrass RhizosphereLVKPTLANWVKTDLAFDNSGNVKGWTTKETWTFEVQNSKDIDVVLDIRRNFQGDWSLTTRADYEKVDATKVKFVMPLKPREKKQFSYELTVKHGTNATK*
Ga0070690_10157900613300005330Switchgrass RhizosphereDVRRNFSGEWSLSTARAYEKVDATKVKFVIPLKAHEKQTFRYELTTRYGTNVTK*
Ga0070677_1065704823300005333Miscanthus RhizosphereIRRNFKGDWTLTTSSNYENVDKSKVKFLVPLAPRAKQKFSYELITRNGTNATR*
Ga0070692_1071553713300005345Corn, Switchgrass And Miscanthus RhizosphereNVKGWTTKETWEVEVQNSKEIDVVLDIRRSFSGDWTLRTSASYENVDATKAKFVLPLKPREKQRFTYELETRHGTNATR*
Ga0070668_10069238423300005347Switchgrass RhizosphereSGWTTKETWEIEVQNSKDIPVVVDIRRNFKGDWTLTTSSNYENVDKSKVKFLVPLAPRAKQKFSYELITRNGTNATR*
Ga0070675_10153001823300005354Miscanthus RhizosphereNVTGWTTKETWEIEVQNSKDIPVVVDIRRNFPGDWTLTTQQKYENVDKTKVKFVLPLASRAKQKFTYDLVTRHGTNATR*
Ga0070673_10101641823300005364Switchgrass RhizosphereLINWIKTDVQFDQSGNVKGWTTRETWDVEVQNSKEIDVVLDIRRNFSGDWNLTTRAQYENVDATKVKFVLPLKPREKQKFTYELTTRHGTNATR*
Ga0070705_10064311523300005440Corn, Switchgrass And Miscanthus RhizosphereSKEIDVMLDIRRNFSGDWSFATNAKYEKVDASKIKFVFPLKPHEKQVLTYELTTRHGLNATR*
Ga0070700_10192955713300005441Corn, Switchgrass And Miscanthus RhizosphereSKEIDVVLDIRRNFSGDWNLTTRAQYENVDATKVKFVLPLKPREKQKFTYELTTRHGTNATR*
Ga0070708_10190284923300005445Corn, Switchgrass And Miscanthus RhizosphereDAVLDIRRNFTGDWSLATNAKYEKVDAQKVKFVVPLKPHEQRRFVYELTTRFGVNATR*
Ga0070678_10049160523300005456Miscanthus RhizosphereNGNVIGWITKETWAIEVQNSKDIPVVVDIRRNFPGDWTLTTQQKYENVDKTKVKFVLPLASRAKQKFTYDLVTRHGTNATR*
Ga0073909_1035738123300005526Surface SoilIDVVLDIRRTFSGDWNLKTETNFEKVDATSVKFVLPLKSREKQAFSYEVTINYGTNVTR*
Ga0070672_10082460413300005543Miscanthus RhizosphereGWTTKETWEIEVQNSKDIPVVVDIRRNFPGDWTLTTQQKYENVDKTKVKFVLPLASRTKQKFTYDLVTRHGTNATR*
Ga0070695_10166163013300005545Corn, Switchgrass And Miscanthus RhizosphereNSKEIDVVLDIRRNFAGDWTLNTRAQYEKVDATKVKFVVPLKPREKQKFTYELTTRLGTNATR*
Ga0068863_10257410613300005841Switchgrass RhizosphereQIETQNSKAIDVQLDVRRNFSGDWALATNAKFEKVDANKVKFLLPLKAHTQEKFSYELVTRQGTNATK*
Ga0066652_10064289323300006046SoilPVVVDIRRNFAGDWTLTTATKYENVDKTKVKFVLPLAPRAKLKFTYELVTRHGTNATR*
Ga0075421_10080935723300006845Populus RhizosphereEVQNSKEIDVVLDIRRNFSGDWSLTTRAEYENVDATKVKFVLPLKPREKQKFTYDLTTRHGTNATR*
Ga0075431_10218597313300006847Populus RhizosphereKEIDVVLDIRRTFSGDWLLRTATGHEKVDATRVKFVMPLKPRAKQRFTYELETRHGTNVTR*
Ga0075420_10132109013300006853Populus RhizospherePTLVNWIKTDVQFDQHGNVKGWTTRETWDIEVQNSKEIDVVLDIRRNFSGDWSLTTRGEYENVDATKVKFVLPLKPREKQKFTYELTTRHGTNATR*
Ga0075434_10089922023300006871Populus RhizosphereRNFAGDWNLTTRAEYENVDATKVKFVLPLKPREKQKFTYELTTRHGTNATR*
Ga0075434_10253053023300006871Populus RhizosphereAGWTIKETWEFELQNSKDIDVTLDIRRNFPGDWDLKTEQKFEKVDAHKVKFVLPLRSREKQKFTYELTTRYGINATR*
Ga0079215_1111615413300006894Agricultural SoilNVTGWTTKEAWEIEVQNSKDIDVVLDIRRNFSGDWTLRTAAAHEKVDAKKVKFVVPLKPRAKQRFTYELETRHGTNVTR*
Ga0079215_1125118713300006894Agricultural SoilIRRNFSGDWTLRTATRHENVDATKVKFVLPLKPREKQRFTYELETRHGTNATR*
Ga0079215_1162373423300006894Agricultural SoilVIDIRRNFAGDWTLRSGTRHENVDATKVKFVLPLKPREKQRFTYELETRHGTNATR*
Ga0079218_1184752213300007004Agricultural SoilDVQFDQHGNVKGWTTRETWEIDVQNSREIDVVLDIRRNFSGDWNLATRAEYENVDATKVKFVLPLKPREKQKFTYELTTRHGTNATR*
Ga0079218_1259661223300007004Agricultural SoilLDIRRNFSGDWTLRTTTTHEKVDAKKIKFIVPLKPHTKQRFTYELETRHGTNVTR*
Ga0073932_101113813300007072Hot Spring SedimentQNSKEIDITLDIRRNFAGDWTLETAAKYEKVDANKVKFVLPLKPGEKQKITYDLTTRQGINAQR*
Ga0073932_112088813300007072Hot Spring SedimentQNSKEIDITLDIRRNFAGDWTLETAAKYEKVDANKVKFVLPLKPGEKQKIIYDLTTRHGINATR*
Ga0073932_125900913300007072Hot Spring SedimentDIAFDARGDVKGWTTKETWEIEVQNSRDIDVVLDIRRNFRGDWTLATAAKYDSVDATKVKFVLPLKSREKQKFTYELTTRHGTNATR*
Ga0105047_1003856413300009083FreshwaterNSKDIPVVLDIRRNFSGDWTLTTTAKYDKVDANKVKFVVPLKPREKQAFTYEVVTKHGTNKTR*
Ga0102851_1129410113300009091Freshwater WetlandsVVLDVRRNFAGDWSLKTGAAYEKVDANKVKFVLPLKPREKSQFTYELTTQLGSNATR*
Ga0111539_1114007123300009094Populus RhizosphereRNFKGDWTLTTSSNYENVDKSKVKFLVPLAPRAKQKFSYELITRNGTNATR*
Ga0111539_1289544623300009094Populus RhizosphereQNSKEIDVVLDIRRNFAGDWTLRTATAHEKVDASKVKFVVPLKPRAQQRFTYELETRYGTNVTR*
Ga0115026_1177275123300009111WetlandQNSKALEVVLDIRRNFRGDWSLGTEAAHEKVDANIVKFIVPLKPREKQTFSYELTTRNGVNVTR*
Ga0066709_10187552513300009137Grasslands SoilQWSNVVGWTIKEQWQFEVQNSKDIDVVLDIRRSFPGDWTLKTDAKHEDVDAHKVKFVLPLKSREKQTFTYELTTRYGTNVTR*
Ga0113563_1107217213300009167Freshwater WetlandsVRRNISGDWALKTDAVYEKADANKVKFILPLKLREKRQFSYDLTTNFGSNVTR*
Ga0113563_1136671213300009167Freshwater WetlandsNSKDIDVVLDARRNFSGDWSLKTDAAYEKVDANKVKFVLPLKPREKSQFTYELTTQLGSNATR*
Ga0105242_1147235723300009176Miscanthus RhizosphereDIDVVLDIRRNFSGDWTLVTQAKYENVDATKVKFVLPLKPREKQTFTYELTTRHGTNATR
Ga0115028_1188971623300009179WetlandKTDLQFDQWGNVKGWTVKETWEFEVQNSKEIDIVLDIRRNFPGDWDLKTDAKNEKVDASKVKFIVPLKPLEKQKFSYELTTRYGTNATK*
Ga0114951_1014627433300009502FreshwaterDIRRNFAGDWSLATQASYEKVDANKVKFLLPLAPRVKQKFTYKLTTRYGANATR*
Ga0114951_1044072113300009502FreshwaterKEDIRFDQWGNVVGWTIKEQWQFEVQNSKDIDVVLDIRRNFAGDWELKSEAKYDNVDKTKVKFVLPLKSHEQQKFSYELTTRFGTNVTR*
Ga0105249_1320207213300009553Switchgrass RhizosphereGHDAEVLVKPTLSNWVKTDIAFDNFGNVRGWTTKETWTFEVQNSKDIDVVLDIRRNFQGDWSLTTRADYEKMDATKVKFVLPLKSREKQQFSYELTVKHGTNATR*
Ga0105252_1046963013300009678SoilVQNSKEIDVVLDIRRNFSGDWTLRTATTQEKVDAKKVKFVVPLKPRAKQRFTYELETRHGTNVTR*
Ga0116153_1037102713300009838Anaerobic Digestor SludgeQTDIVLDLRRNFAGDWSLATAAPYEKMDAGKVRFLAPLKARETKRFGYELTTRHGINATR
Ga0126308_1096291813300010040Serpentine SoilIKGWTTKETWEIEVQNSKDIDVVLDIRRNFAGDWTLKTSAPYENVDATKVKFILPLKPRERQKLTYELTTRHGTNVTR*
Ga0126306_1121265023300010166Serpentine SoilQNSKDIPVVLDIRRNFSGDWTLTTAAKYENVDATKVKFVIPLAARTKQTFTYNVVTRHGTSATR*
Ga0074045_1049616213300010341Bog Forest SoilETWRFEVQNCKEIDVVLDIRRNFSGDWSLVTEASHEKVDANKVKFVVPLKPREKQTFSYELTTRNGVNVTR*
Ga0134128_1102747523300010373Terrestrial SoilDWTLATGAAYEKVDATKVKFIVPLKPRAKQKFSYELTTRYGTNATK*
Ga0134127_1146886423300010399Terrestrial SoilLGHDSEVLVKPTLVNWTKTDLQFDQHGDVKGWTIRETWEIEVQNSKEIDVIVDVRRNFSGDWRLTTRAEYENVDATKIKFVLPLKPREKQKFTYELTTRCGTNATR*
Ga0134121_1066689613300010401Terrestrial SoilQFDGDGNVKGWTVKETWQIEVQNSKDIDVVLDIRRNFAGDWSLKTDATHENVDATKVKFVLPLKSREKQQFSYDVTSHFGSNVTR*
Ga0134121_1111303533300010401Terrestrial SoilFGGDWSLVTDARYEKVDATKVKFVLPLKPREKLVFTYQLITRHGTSVTR*
Ga0134123_1071051823300010403Terrestrial SoilVLDIRRSFQGDWSLATRSDYEKLDAAKVKFVMPLKPREKRQFSYELTVKHGTNATR*
Ga0134123_1077163413300010403Terrestrial SoilIDIMLDVRRNFSGDWSLDTTATFEKVDATKVKFVLPLKSRAQQRFTYELTIRHGTNATK*
Ga0136852_1225020113300010412Mangrove SedimentRRNFPGDWDMATEAQYEKVDADTVKFLRSLKPREKQQFSYELTTRHGTNVRR*
Ga0116241_1014147813300010429Anaerobic Digestor SludgeRNFAGDWTLKTDAAYEKVDANKVKFLLPLKAREKRQFSYELTTNFGSNATR*
Ga0137325_114010723300011415SoilSKEIDVVLDIRRNFTGDWTLRTPTTHEKVDANKVKFVVPLKPRAKQRFTYELETRHGTNVTR*
Ga0137326_102259813300011417SoilTRETWDIEVQNSKEIDVVLDIRRNFSGDWSLTTRGEYENVDATKVKFVLPLKPREKQRFTYELTTRHGTNATR*
Ga0137436_116647723300011423SoilQNSKEIDVVLDTRRNFAGDWTLNTRAQYEKVDATKVKFVVPLKPREKQKFTYELTTRLGTNATR*
Ga0137431_112551713300012038SoilQNSKEIDVVLDIRRNFSGDWTLRTATTQEKVDAKKVKFVVPLKPRAKQRFTYELETRHGTNVTR*
Ga0137332_104814823300012122SoilWEIEVQNSKEIDVVLDIRRNFTGDWTLRTPTTHEKVDANKVKFVVPLKPRAKQRFTYELETRHGTNVTR*
Ga0137321_100515513300012175SoilIRRNFAGDWSLITQAPYENVDATKVKFVRPLGPREKQSFAYQLGTRYGTNANR*
Ga0137435_120142313300012232SoilVVLDIRRNFAGDWTLNTRAPYEKVDATKVKFVVPLKPREKQRFTYELTTRLGTNATR*
Ga0136635_1023440023300012530Polar Desert SandVVLDIRRSFSGDWTLTTAAAYEKVDANKVKFILGLQPRQKQKFTYEVVTRHGTNATK*
Ga0163212_118147423300013087FreshwaterVAFDAGGNVKGWTTKETWEFEVQNSKDIDVVLDIRRNFASDWTLATAAPYEKVDATKVKFVLPLKAREKQKFSYELTVRHGTNATK*
Ga0163200_117342813300013088FreshwaterDIDVVLDIRRNFQGDWDLKTDAKYEKVDASKVKFVLPMKPREKQKFSYELTTRYGTNAAR
Ga0157378_1245406923300013297Miscanthus RhizosphereGDWTLTTSSKYENVDKSKVKFLVPLAPRAKQKFSYELITRNGTNATR*
Ga0157372_1183148213300013307Corn RhizosphereVITLNIRRNFSGDWTLTTTAKYENVDKTKVKFVLPLAPRAKQTITYQLVTRHGTNATR*
Ga0157375_1380989123300013308Miscanthus RhizosphereRNFSGDWSLTSAANHEKVDATKVKFTVPLKPREKRQFAYELTAHFGVNIVR*
Ga0182011_1058941323300014496FenLDIRRNFAGDWDLDTRAEREKVDATTVKFIVPLKPHEKKTFSYDLTTRFGVNVTR*
Ga0182021_1289496813300014502FenRRNFAGDWSLKTDAKFEKVDAGKVKFVLPLRAHEKQRFGYEVTMNFGSNVSR*
Ga0182027_1207593923300014839FenWTVKQTWQFEVQNSKEIDVVLDIRRNFAGDWDLETKAEREKVDANKVKFIVPLKPHEKKTFSYDLTTRFGVNVTR*
Ga0182027_1228901523300014839FenIKQTWQFEVQNSKEIDVVLDIRRNFTGDWDLETTAEREKVDANTVKFIVPLKPHEKKTFSYDLTTRYGLNVTR*
Ga0132257_10302125913300015373Arabidopsis RhizosphereNFSGDWTLNTGARYENVDATKVKFVVPLKPREKQKFSYELTTRYGTNATR*
Ga0184635_1030284313300018072Groundwater SedimentSFQGDWSLATRADYEKVDATKVKFEMPLKPREKRQFSYELTVKHGTNATK
Ga0190274_1314562413300018476SoilQKTDVQFDQNGNVKGWTTKETWEIEVQNSKDIPVVVDIRRNFPGDWTLTTQQKYENVDKTKVKFVLPLAPRAKQKFSYQLVTRHGTNATR
Ga0193741_100702913300019884SoilSFQGDWSLATRADYEKVDATKVKFEMPLKSREKRQFSYELTVKHGTNATR
Ga0194131_1001343113300020193Freshwater LakeVAGWTIKQTWQFELQNSKEIDVVLDIRRNFAGDWTLVTAQAQEKVDATKVKFVIPLKPREKKTFTYELTTRFGTNATK
Ga0193706_105857323300021339SoilDVVLDIRRNFNGDWSLETQDQYEKVDAKKIKFLVPLRSKEKQALTYQVTTRYGTNVRR
Ga0193695_104436023300021418SoilQIELQNSKDIDVMLDIRRNFTGDWQLKSDAKYETVDANKIKFVLPLRPREKQTFSYQLTTRYGINVTR
Ga0194060_1033330213300021602Anoxic Zone FreshwaterEQWQVEVQNSKDIDVVLDLRRNFSGDWELKSEAKYENVDKTKVKFVLPLKRHEQQKFSYELTTRFGTNVIK
Ga0212093_101101913300022554Hot Spring SedimentIQNSKEIDITLDIRRNFAGDWTLETAAKYEKVDANKVKFVLPLKPGEKQKIIYDLTTRHGINATR
Ga0212088_1011368153300022555Freshwater Lake HypolimnionVLDIRRNFAGDWSLATQASYEKVDANKVKFLLPLAPRVKQKFTYKLTTRYGANATR
Ga0212088_1058798123300022555Freshwater Lake HypolimnionSWEVELQNFKGIEIVLDLRRNFGGDWDLKTDAPYEKVDANRVKFVRPLKAREQQKFTYELTTRYGVNVTR
Ga0212088_1074482123300022555Freshwater Lake HypolimnionIKETWQFEVQNSKEIPIVLDIRRNFTGDWELQTVAPHEKVDAGKMKFVLPLQPHEKQTFTYELTTRFGTNVTK
Ga0212088_1075202113300022555Freshwater Lake HypolimnionNSKDIDVVLDVRRNFAGDWSLQTDASYEKVDANKVKFVLPLKAREKRQFSYDVTTNYGSNATR
(restricted) Ga0233424_10000492353300023208FreshwaterGDWTLATAQANEKVDATKVKFVIPMKPREKKTFTYELTTRHGTNATK
(restricted) Ga0233424_1000065713300023208FreshwaterIDVVLDIRRNFSGDWTLATAQANEKVDATKVKFVIPMKPREKTTFTYELTTRHGTNATK
Ga0137417_134954713300024330Vadose Zone SoilMLDIRRNFAGDWSLQTDAKYDKVDANKVKFVLPLGLREKRQFAYEVTTHFGANMTR
Ga0209083_108505213300025162FreshwaterDIRRNFAGDWSLATQASYEKVDANKVKFLLPLAPRVKQKFTYKLTTRYGANATR
Ga0209083_115586423300025162FreshwaterVRRNFTGDWSLQTATAYEKVDANKVKFVLPLKAREKQVLIYELTTNLGSNATR
Ga0208566_105420333300025307FreshwaterVKGWTTKETWEIEVQNSKDIEIALDIRRNFSGDWAMTTEAPYEKVDANTVKFVLPLKAREKRTIGYEVTTRLGTNATR
Ga0209697_1056820113300025316Freshwater Lake HypolimnionNGNVKGWTVHETWQVEVQNSKDIDVVLDVRRNLAGDWSLNTTAVYEKVDANKVKFVLPLKAHEKRQFGYEITTNFGSNANR
Ga0208495_108199213300025476FreshwaterRRNFAADWSLKTDASYEKVDANKVKFVLPLKAREKRVLSYELTMNLGSNATR
Ga0207682_1030002413300025893Miscanthus RhizosphereIRRNFKGDWTLTTSSNYENVDKSKVKFLVPLAPRAKQKFSYELITRNGTNATR
Ga0207668_1133057523300025972Switchgrass RhizosphereREDIDVVLDVRRNFGGDWSLTSAASHEKVDTTKVKFIVPLKPREKRQFAYELTTHFGINIVR
Ga0207668_1155991223300025972Switchgrass RhizosphereGDWTLTTQQKYENVDKTKVKFVLPLASRAKQKFTYDLVTRHGTNATR
Ga0207641_1161860513300026088Switchgrass RhizosphereTQNSKAIDVQLDVRRNFSGDWALATNAKFEKVDANKVKFLLPLKAHTQEKFSYELVTRQGTNATK
Ga0209131_136341713300026320Grasslands SoilETWEFELQNSKEIDIVLDIRRNFAGDWDIQTGAKFEKVDANKVKFVLPLKAHEKQKFTYEVTTRYGTNATR
Ga0256810_106285123300026357SedimentKESWEVEVQNSKDIDVVLDVRRNFNGDWSLTSETNYEKVDANKVKFLLPLKPRGKQAFGYEVTTRYGTNATR
Ga0209811_1023463923300027821Surface SoilLARIRWLDVVLDIRRTFSGDWNLKTETNFEKVDATSVKFVLPLKSREKQAFSYEVTINYGTNVTR
Ga0208980_1075482013300027887WetlandLMNWEKTNLQFDGNGNVKGWTVKETWQVEVQNSKDIDVVLDVRRNFAGDWSLKLNASYEKVDANKVKFVLPLKAREKRQFTYEVTTNFGSNVTR
Ga0209488_1100115523300027903Vadose Zone SoilLDIRFDQWGGVVGWTIKETWQFELQNSKDIDVVLDIRRNFAGDWALKTDTKQEYVDANKVKFVLPLKPREKQKFTYELTTRLGTNATG
Ga0268283_114130523300028283Saline WaterDVRRNFAGDWSVKTEAAYEKVDANKLKFVLPLKAHEKRQFSYDLTTNFGSNATR
Ga0265324_1025757213300029957RhizosphereLDIRRNFMDDWDIESVTKSEKVDATKVKFVLPLKSREKKTFTYELTTRYGLNAKK
Ga0302323_10291861313300031232FenKLMNWVKTDLQFDQWGNVKGWTTKETWEFEVQNSKEIDIVLDIRRDFPGDWDLKTDANHEAVDGNKVKFVEPLKPLAKQTFTYELTTRYGSNKTK
Ga0302320_1062337723300031524BogKKGDIDGWTTKETWQVELQNSKEIDVTLDVRRSFSGDWTLATDAKFEKMDAKKVKFLVQLKPHEQLTLTYDLTTRHGTNATR
Ga0307405_1107443223300031731RhizosphereTTRETWDVEVQNSKDIAVVLDVRRTFPGDWTLTTQARYESVDAHKVKFVLPLAPRAKQKFTYQLVTRHGTNATR
Ga0307468_10118997823300031740Hardwood Forest SoilKETWEIDVQNSKDIPVVVDIRRNFSGDWTLTTQQKYENVDKTKVKFVLPLAPRAKQKFTYELVTRQGTNATR
Ga0307416_10384524723300032002RhizosphereEIEVQNSKDIDVVLDIRRNFSGNWALRTAAAHEKVDAKKVKFVVPLKPRAKQRFTYELETRHGTNVTR
Ga0315272_1031978423300032018SedimentDIVLDIRRNFAGDWTLKMDAKYENVDASRVKFVLPLKAREKKMFTYELTTRYGTSATR
Ga0315272_1045732023300032018SedimentIRRNFAGDWELKTDAKYEKVDAGKVKFVLPLKSREKKTFTYEVTTRYGTNVTR
Ga0315910_1041345413300032144SoilTLMDWQKVDVQFDNRRNVSGWTVKETWEIEVQNSKDIPVVVDIRRNFSGDWTLTTRQNYENVDANKVKFLVPLATRGKQTFSYEIVVRHGTNARR
Ga0315283_1240130123300032164SedimentDLRRNFTGDWDLKTEAGFEKVDAQKVKFVRPLKSREKAKLEYVLTTRQGLNATR
Ga0315271_1049706223300032256SedimentILDVRRNFAGDWSLKTDAVYEKVDASKVKFLLPLKAHEKRQFSYDLITNFGSNATR
Ga0315286_1050541523300032342SedimentKPTLMNWVRTDIAFDGNGNVKGWTTRETWEIEVQNSKDIDVVLDIRRNFTGDWSMTTDARYEKVDANKVKFLVPLKSRKKQRFTYEVTTRLGTNATR
Ga0315287_1239386623300032397SedimentWQIEVQNSKDIDVMLDIRRNFSGDWSLKTDARYEKVEANKVKFLWPLKPREKQQFTYEVTIHDGSNVSR
Ga0315275_1017919413300032401SedimentWTTKETWQFEVQNSKEIEVVLDIRRNLNGDWSLVTEAPHEKVDANKVKFIVPLKPREKQTFSYELTTRNGVNVTR
Ga0315275_1131484513300032401SedimentRNFSGDWSLVTAAQYEKVDATKVKFVLPLKPRAQQKFTYELTVKHGTNATK
Ga0315275_1279861713300032401SedimentRNFSGDWSLVTDAKYEKVDATKVKFVLPLKPRAQQKFTYELTVKHGTNATK
Ga0315273_1144030623300032516SedimentGNGNVKGWTTRETWEIEVQNSKDIDVVLDIRRNFTGDWSMPTDARYEKVDANKVKFLVPLKSREKQRFTYEVTTRLGTNATR
Ga0316232_107670923300032605FreshwaterKDIDVVLDIRRTFAGDWELKTDTQHENVDAHKVKFVLPLKSREQQQFSYELTTRYGIIIQ
Ga0316230_114756713300032668FreshwaterNSKDIDVVLDIRRNFAGDWELKSDAKYENVDKSKVKFVFPLKPREQKTFTYELTTRFGTNVTR
Ga0334722_1012775113300033233SedimentIRRNFPGDWDLKTDAKHENVDAHKVKFVLPLKSREKQTFSYELTTRYGTNVTK
Ga0316619_1021838713300033414SoilDIDVVLDIRRNFSGDWSLKTDTKYEKVDANKVKFVLPLKPREKQQSTYEVTTQYGSNVTR
Ga0316622_10285112423300033416SoilVLDIRRNFSGDWSMTTDAKYENVDANKVKFAVPLKPREKQKLSYEVTTRQGTNATK
Ga0316600_1094472723300033481SoilDLQFDQWGNVKGWTVKETWEFEVQNSKEIDIVLDIRRNFPGDWDLKTDAKNEKVDASKVKFVVPLKPLEKQKFTYELTTRYGTNATR
Ga0316627_10152651813300033482SoilIDVVLDVRRNLIGDWSLTTDSNYEKVDANKVKFLLPLKPRAKQTFTYEVTTRYGTNVTR
Ga0316624_1117526713300033486SoilRRNFKGDWSLATEAAHERVDANKVKFIVPLKPREKRTFSYELSTRNGVNVTR
Ga0316630_1040756613300033487SoilTTRETWQFEVQNSKELEVVLDIRRNFKGDWSLVTQAPHEKVDANKVKFIVPLKPREKQTFSYELTTRNGVNVTR
Ga0316628_10236895823300033513SoilNFSGDWSMNTGAVYEKLDANKVKFLRPLKPHEKQTFSYELTTKRGTNATR
Ga0316616_10205592223300033521SoilIEVVLDIRRNFAGDWSLATAAAHQKVDANKVKFVVPLKAGEKQTFSYELTTRYGVNVTR
Ga0316616_10478166413300033521SoilELGNDREVLIKPKLMNWEKVNVQFDQAGNVKGWTVKETWEIEAQNSKEIGVVLDIRRNFPGDWALATQAVYEKVDAHKVKFVVPLKPHEKQKFSYELTTRYGLNVTR
Ga0316617_10033169713300033557SoilGNVKGWTIKETWQVEVQNSKDIDVVLDVRRSFAGDWSLRTDGGYEKVDANKVKFVLPLKPREKSQFTYELTTQLGSNATR
Ga0316617_10249050823300033557SoilWEKTNLQFDGNGNVKGWTVKETWQIEVQNSKDIDVVLDVRRNFAGDWALRTDASYEKVDATKVKFVLPLKAREKRQFTYVLNTNFGSNATR
Ga0364927_0134845_4_1743300034148SedimentVLDIRRNFSGDWSLTTRGEYENVDATKVKFVLPLKPREKQRFTYELTTRHGTNATR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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