Metagenome / Metatranscriptome Family F043845

Basic Information
Family ID	F043845
Family Type	Metagenome / Metatranscriptome
Number of Sequences	155
Average Sequence Length	45 residues
Representative Sequence	MTTAAIRRFAVPSPEELIDRARSMVPEIRALAEETERNRNVLPH
Number of Associated Samples	128
Number of Associated Scaffolds	155

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.06 %
% of genes near scaffold ends (potentially truncated)	97.42 %
% of genes from short scaffolds (< 2000 bps)	94.19 %
Associated GOLD sequencing projects	121
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Most Common Taxonomy
Group	Bacteria (66.452 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.742 % of family members)
Environment Ontology (ENVO)	Unclassified (29.677 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.742 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.33% β-sheet: 0.00% Coil/Unstructured: 66.67%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 155 Family Scaffolds
PF05239	PRC	5.81
PF02515	CoA_transf_3	5.16
PF01979	Amidohydro_1	3.87
PF02602	HEM4	3.87
PF00459	Inositol_P	3.87
PF13432	TPR_16	2.58
PF04909	Amidohydro_2	1.29
PF08240	ADH_N	1.29
PF12806	Acyl-CoA_dh_C	1.29
PF13727	CoA_binding_3	0.65
PF02604	PhdYeFM_antitox	0.65
PF00873	ACR_tran	0.65
PF08028	Acyl-CoA_dh_2	0.65
PF02548	Pantoate_transf	0.65
PF00440	TetR_N	0.65
PF07704	PSK_trans_fac	0.65
PF01416	PseudoU_synth_1	0.65
PF11737	DUF3300	0.65
PF00561	Abhydrolase_1	0.65
PF03237	Terminase_6N	0.65
PF08450	SGL	0.65
PF00005	ABC_tran	0.65
PF00355	Rieske	0.65
PF05838	Glyco_hydro_108	0.65
PF13763	DUF4167	0.65
PF02738	MoCoBD_1	0.65
PF09851	SHOCT	0.65
PF02861	Clp_N	0.65
PF01568	Molydop_binding	0.65
PF13193	AMP-binding_C	0.65

COG ID	Name	Functional Category	% Frequency in 155 Family Scaffolds
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	5.16
COG1587	Uroporphyrinogen-III synthase	Coenzyme transport and metabolism [H]	3.87
COG0101	tRNA U38,U39,U40 pseudouridine synthase TruA	Translation, ribosomal structure and biogenesis [J]	0.65
COG0413	Ketopantoate hydroxymethyltransferase	Coenzyme transport and metabolism [H]	0.65
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	0.65
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.65
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.65
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.65
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.65
COG3926	Lysozyme family protein	General function prediction only [R]	0.65
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.65
COG4423	Uncharacterized conserved protein	Function unknown [S]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.45 %
Unclassified	root	N/A	33.55 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.45 %
Unclassified	root	N/A	33.55 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.45 %
Unclassified	root	N/A	33.55 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	45.81 %
Unclassified	root	N/A	33.55 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.23 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.29 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	37.42 %
Unclassified	root	N/A	33.55 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	2.58 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.58 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.29 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.55 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	21.29 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.87 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2.58 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1.29 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1.29 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	1.29 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.94 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.65 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.65 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	21.29 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	2.58 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	1.29 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.29 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	1.29 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.94 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.65 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.65 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.65 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.65 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	21.29 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	2.58 %
Loktanella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Loktanella	1.29 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.29 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.29 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.94 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.65 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.65 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.65 %
Caulobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter	0.65 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	21.29 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	2.58 %
Loktanella ponticola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Loktanella → Loktanella ponticola	1.29 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.29 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.29 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.94 %
unclassified Caulobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter	0.65 %
unclassified Sphingomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas	0.65 %
Pseudarthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Pseudarthrobacter	0.65 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.65 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	21.29 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	2.58 %
Loktanella ponticola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Loktanella → Loktanella ponticola	1.29 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.29 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.29 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.94 %
Sphingomonas sp. SRS2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. SRS2	0.65 %
Pseudarthrobacter phenanthrenivorans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Pseudarthrobacter → Pseudarthrobacter phenanthrenivorans	0.65 %
Caulobacter sp. S45	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. S45	0.65 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.65 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.65 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100785368	Not Available	832	Open in IMG/M
3300004091\|Ga0062387_101447793	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300004092\|Ga0062389_100310063	All Organisms → cellular organisms → Bacteria → Proteobacteria	1651	Open in IMG/M
3300004092\|Ga0062389_100839028	All Organisms → cellular organisms → Bacteria → Proteobacteria	1100	Open in IMG/M
3300004092\|Ga0062389_102305859	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300004153\|Ga0063455_100024971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1698	Open in IMG/M
3300005338\|Ga0068868_101175709	All Organisms → cellular organisms → Bacteria → Proteobacteria	708	Open in IMG/M
3300005354\|Ga0070675_101291941	All Organisms → cellular organisms → Bacteria → Proteobacteria	672	Open in IMG/M
3300005435\|Ga0070714_101689640	Not Available	618	Open in IMG/M
3300005454\|Ga0066687_10960662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Pseudarthrobacter → Pseudarthrobacter phenanthrenivorans	509	Open in IMG/M
3300005471\|Ga0070698_101432184	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300005529\|Ga0070741_10684265	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300005542\|Ga0070732_10495050	Not Available	740	Open in IMG/M
3300005556\|Ga0066707_10942174	Not Available	528	Open in IMG/M
3300005560\|Ga0066670_10059938	All Organisms → cellular organisms → Bacteria	2008	Open in IMG/M
3300005587\|Ga0066654_10681521	Not Available	575	Open in IMG/M
3300005764\|Ga0066903_105348377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	678	Open in IMG/M
3300005764\|Ga0066903_106218559	Not Available	624	Open in IMG/M
3300005764\|Ga0066903_107781725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	551	Open in IMG/M
3300005836\|Ga0074470_10734554	Not Available	549	Open in IMG/M
3300005898\|Ga0075276_10134882	All Organisms → cellular organisms → Bacteria → Proteobacteria	559	Open in IMG/M
3300006028\|Ga0070717_11954664	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300006796\|Ga0066665_10481755	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300006806\|Ga0079220_10580746	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300006893\|Ga0073928_10157076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1828	Open in IMG/M
3300006904\|Ga0075424_100862642	All Organisms → cellular organisms → Bacteria → Proteobacteria	966	Open in IMG/M
3300006904\|Ga0075424_102606841	All Organisms → cellular organisms → Bacteria → Proteobacteria	528	Open in IMG/M
3300007255\|Ga0099791_10553487	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300009012\|Ga0066710_103053209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	650	Open in IMG/M
3300009012\|Ga0066710_103563038	Not Available	588	Open in IMG/M
3300009012\|Ga0066710_104121043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	543	Open in IMG/M
3300009090\|Ga0099827_10457542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1094	Open in IMG/M
3300009137\|Ga0066709_100734797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1423	Open in IMG/M
3300010037\|Ga0126304_10261592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1140	Open in IMG/M
3300010043\|Ga0126380_11455069	Not Available	605	Open in IMG/M
3300010045\|Ga0126311_11581394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	551	Open in IMG/M
3300010159\|Ga0099796_10361723	All Organisms → cellular organisms → Bacteria → Proteobacteria	628	Open in IMG/M
3300010359\|Ga0126376_12285696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	586	Open in IMG/M
3300010360\|Ga0126372_11424910	Not Available	726	Open in IMG/M
3300010361\|Ga0126378_12787776	Not Available	558	Open in IMG/M
3300010366\|Ga0126379_13799923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	506	Open in IMG/M
3300010376\|Ga0126381_102113443	All Organisms → cellular organisms → Bacteria → Proteobacteria	811	Open in IMG/M
3300010376\|Ga0126381_103304041	Not Available	636	Open in IMG/M
3300010376\|Ga0126381_103895921	Not Available	582	Open in IMG/M
3300010376\|Ga0126381_104642888	Not Available	529	Open in IMG/M
3300010401\|Ga0134121_10804415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	903	Open in IMG/M
3300011270\|Ga0137391_10787824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	784	Open in IMG/M
3300011271\|Ga0137393_10256320	Not Available	1486	Open in IMG/M
3300012203\|Ga0137399_10901596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Loktanella → Loktanella ponticola	744	Open in IMG/M
3300012208\|Ga0137376_10827625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Loktanella → Loktanella ponticola	796	Open in IMG/M
3300012209\|Ga0137379_10774973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	864	Open in IMG/M
3300012210\|Ga0137378_11481680	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300012211\|Ga0137377_10166635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2113	Open in IMG/M
3300012349\|Ga0137387_10427881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	960	Open in IMG/M
3300012354\|Ga0137366_10183215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1570	Open in IMG/M
3300012362\|Ga0137361_10613155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	997	Open in IMG/M
3300012362\|Ga0137361_11007520	Not Available	752	Open in IMG/M
3300012925\|Ga0137419_10797021	Not Available	772	Open in IMG/M
3300012930\|Ga0137407_11046116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	773	Open in IMG/M
3300012987\|Ga0164307_10973094	Not Available	688	Open in IMG/M
3300014199\|Ga0181535_10704607	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300015089\|Ga0167643_1068844	Not Available	519	Open in IMG/M
3300016270\|Ga0182036_11632958	Not Available	543	Open in IMG/M
3300016357\|Ga0182032_10200243	Not Available	1519	Open in IMG/M
3300016357\|Ga0182032_10589029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	924	Open in IMG/M
3300016371\|Ga0182034_10798807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	807	Open in IMG/M
3300016404\|Ga0182037_10807706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	809	Open in IMG/M
3300016422\|Ga0182039_10545447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1007	Open in IMG/M
3300016445\|Ga0182038_10740594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	858	Open in IMG/M
3300017943\|Ga0187819_10815886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	523	Open in IMG/M
3300017973\|Ga0187780_10728883	Not Available	716	Open in IMG/M
3300018062\|Ga0187784_10998058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	665	Open in IMG/M
3300018062\|Ga0187784_11368802	Not Available	561	Open in IMG/M
3300018090\|Ga0187770_10891346	Not Available	714	Open in IMG/M
3300018482\|Ga0066669_10238539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1427	Open in IMG/M
3300020010\|Ga0193749_1099010	Not Available	521	Open in IMG/M
3300020579\|Ga0210407_10048659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3162	Open in IMG/M
3300020581\|Ga0210399_11155578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	617	Open in IMG/M
3300020583\|Ga0210401_11558101	Not Available	518	Open in IMG/M
3300021168\|Ga0210406_10374663	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300021170\|Ga0210400_10674930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	850	Open in IMG/M
3300021358\|Ga0213873_10248983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	563	Open in IMG/M
3300021401\|Ga0210393_10876616	Not Available	729	Open in IMG/M
3300021404\|Ga0210389_10190693	All Organisms → cellular organisms → Bacteria	1597	Open in IMG/M
3300021433\|Ga0210391_10028018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	4527	Open in IMG/M
3300021433\|Ga0210391_10387981	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300021476\|Ga0187846_10163351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. S45	940	Open in IMG/M
3300021476\|Ga0187846_10475630	Not Available	511	Open in IMG/M
3300021560\|Ga0126371_11226963	Not Available	886	Open in IMG/M
3300021560\|Ga0126371_13219661	Not Available	552	Open in IMG/M
3300025906\|Ga0207699_10028572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3102	Open in IMG/M
3300025912\|Ga0207707_10499460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1038	Open in IMG/M
3300025915\|Ga0207693_10232718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1447	Open in IMG/M
3300025926\|Ga0207659_11767026	Not Available	526	Open in IMG/M
3300025928\|Ga0207700_11060989	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300026319\|Ga0209647_1223081	Not Available	637	Open in IMG/M
3300026322\|Ga0209687_1101986	Not Available	931	Open in IMG/M
3300026342\|Ga0209057_1145233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	793	Open in IMG/M
3300026528\|Ga0209378_1194230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	686	Open in IMG/M
3300026551\|Ga0209648_10416722	Not Available	865	Open in IMG/M
3300027583\|Ga0209527_1136398	Not Available	546	Open in IMG/M
3300027669\|Ga0208981_1069426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	898	Open in IMG/M
3300027815\|Ga0209726_10436987	Not Available	601	Open in IMG/M
3300027824\|Ga0209040_10353523	Not Available	697	Open in IMG/M
3300027903\|Ga0209488_10366701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1069	Open in IMG/M
3300027907\|Ga0207428_11093961	Not Available	557	Open in IMG/M
3300029636\|Ga0222749_10305975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	823	Open in IMG/M
3300029636\|Ga0222749_10541937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	633	Open in IMG/M
3300031096\|Ga0308193_1081508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	532	Open in IMG/M
3300031474\|Ga0170818_100037937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	521	Open in IMG/M
3300031543\|Ga0318516_10206684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1134	Open in IMG/M
3300031543\|Ga0318516_10279618	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300031545\|Ga0318541_10617022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	606	Open in IMG/M
3300031679\|Ga0318561_10328782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	837	Open in IMG/M
3300031679\|Ga0318561_10458865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	701	Open in IMG/M
3300031681\|Ga0318572_10373287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	847	Open in IMG/M
3300031682\|Ga0318560_10550339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	625	Open in IMG/M
3300031719\|Ga0306917_11406704	Not Available	538	Open in IMG/M
3300031724\|Ga0318500_10080065	All Organisms → cellular organisms → Bacteria	1453	Open in IMG/M
3300031748\|Ga0318492_10248783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	918	Open in IMG/M
3300031764\|Ga0318535_10533056	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300031777\|Ga0318543_10095084	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1276	Open in IMG/M
3300031777\|Ga0318543_10132322	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300031781\|Ga0318547_10634167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	663	Open in IMG/M
3300031793\|Ga0318548_10433128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	644	Open in IMG/M
3300031795\|Ga0318557_10358799	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300031832\|Ga0318499_10248536	Not Available	691	Open in IMG/M
3300031859\|Ga0318527_10393610	Not Available	591	Open in IMG/M
3300031893\|Ga0318536_10125220	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1299	Open in IMG/M
3300031893\|Ga0318536_10669103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	517	Open in IMG/M
3300031912\|Ga0306921_10184426	All Organisms → cellular organisms → Bacteria	2446	Open in IMG/M
3300031938\|Ga0308175_101128020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	870	Open in IMG/M
3300031942\|Ga0310916_11282619	Not Available	603	Open in IMG/M
3300031942\|Ga0310916_11345821	Not Available	586	Open in IMG/M
3300031946\|Ga0310910_10279543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1310	Open in IMG/M
3300031946\|Ga0310910_11284016	Not Available	566	Open in IMG/M
3300031954\|Ga0306926_12432634	Not Available	576	Open in IMG/M
3300031965\|Ga0326597_10258902	All Organisms → cellular organisms → Bacteria	2002	Open in IMG/M
3300032001\|Ga0306922_10404783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1461	Open in IMG/M
3300032001\|Ga0306922_11502402	Not Available	673	Open in IMG/M
3300032035\|Ga0310911_10063384	All Organisms → cellular organisms → Bacteria	1957	Open in IMG/M
3300032035\|Ga0310911_10641222	Not Available	616	Open in IMG/M
3300032035\|Ga0310911_10786569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	550	Open in IMG/M
3300032043\|Ga0318556_10183437	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300032059\|Ga0318533_10808750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. SRS2	688	Open in IMG/M
3300032059\|Ga0318533_11177163	Not Available	561	Open in IMG/M
3300032068\|Ga0318553_10375662	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300032076\|Ga0306924_11555245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	699	Open in IMG/M
3300032090\|Ga0318518_10603033	Not Available	560	Open in IMG/M
3300032261\|Ga0306920_100120614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3895	Open in IMG/M
3300032782\|Ga0335082_11340176	Not Available	585	Open in IMG/M
3300032892\|Ga0335081_10405632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1752	Open in IMG/M
3300032955\|Ga0335076_11181806	Not Available	649	Open in IMG/M
3300033158\|Ga0335077_10123564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3005	Open in IMG/M
3300033289\|Ga0310914_11434819	Not Available	593	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.48%
Host-Associated	Host-Associated	4.52%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.03%
Aquatic	Environmental → Aquatic	6.45%
Plants	Host-Associated → Plants	4.52%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.74%
Freshwater	Environmental → Aquatic → Freshwater	5.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.87%
Cave	Environmental → Terrestrial → Cave	1.29%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.65%
Sediment	Environmental → Aquatic → Sediment	0.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.90%
Loam	Environmental → Terrestrial → Soil → Loam	9.03%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.81%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.58%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.29%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.29%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.65%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.65%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	37.42%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.68%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.52%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.58%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.29%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.65%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.65%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.65%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.65%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.65%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.74%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.16%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.52%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.23%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.58%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.58%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.58%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.94%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.29%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.29%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	1.29%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.29%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.65%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.65%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.65%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.65%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.65%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.65%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.65%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.65%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005898	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_405	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300015089	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8A, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031096	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F043845

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1007853682	3300002245	Forest Soil	VTTAAIRRFAIPTPDELISRARRMAPEIRGLAEETERNRNV
Ga0062387_1014477932	3300004091	Bog Forest Soil	MTSAAVRLVAPSGPEELIARAKAMMPEIRELAEETERNRTI
Ga0062389_1003100633	3300004092	Bog Forest Soil	MTTAAIRRIAIPSPEELIDRARSMVPEIRALAETTERNRNVLPHIIDKIRDAELLRTCRPKEFG
Ga0062389_1008390281	3300004092	Bog Forest Soil	MTNAAVRRLAVPSPDELVERARAMVPEIRALAEETERNRAISPHI
Ga0062389_1023058592	3300004092	Bog Forest Soil	LRMTTAAVRRLAVPSPDELVERARAMVPEIRALAEETERNR
Ga0063455_1000249711	3300004153	Soil	MTTAAIRRLTTIPSPEELIGRAREMVPEIRALAEETERNRNLFPH
Ga0068868_1011757091	3300005338	Miscanthus Rhizosphere	MSTAAIRHLTVPSPEELIGRARAMVPEIRDLAQKTEENRGLFPHIVDNIRA
Ga0070675_1012919411	3300005354	Miscanthus Rhizosphere	MTNAAIRHLSIPSPDELIGRAGAMVPEIRELAQQTEENRGLFPQIVDKIRAAE
Ga0070714_1016896401	3300005435	Agricultural Soil	MSTAAIRRLATIPSPAELIGRAREMVPEIRALAEETERNRNLFPHIVDRIREAEL
Ga0066687_109606621	3300005454	Soil	MTTAAIRRLAIPSADELVERARAMAPEIRALAEETERTRNLSPHI
Ga0070698_1014321842	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MTTAAVRRLSVPSPDELIERARAMVPEIRALAQETERNRNLFPHIV
Ga0070741_106842651	3300005529	Surface Soil	MPTAAARRLTIPSPDELVARAAAMAPEIRALAEATERNRNVFPHIIDKIRD
Ga0070732_104950502	3300005542	Surface Soil	MTAAVIRRLSVPSPDELIERAAAIIPEIRELAEET
Ga0066707_109421742	3300005556	Soil	MTGAPIRRVALPTPEGLIARARDMVPEIRGLAEETERNRNVPPHI
Ga0066670_100599381	3300005560	Soil	MTSAAVRLVAPSGPEELVARAKAMVPEIRELAEETERN
Ga0066654_106815211	3300005587	Soil	MSTAAIRRLAAIPSPEELIERAREMAPEIRALAEETERNRN
Ga0066903_1053483771	3300005764	Tropical Forest Soil	VTSAAIRRLAVPSPGELIDRARAMMPEIRALAEETERNRNVLPHII
Ga0066903_1062185591	3300005764	Tropical Forest Soil	MTAAAIRRLSIPSSDELVERARALLPDIRGLAEATEQNRNVFPHIIEKIRDAELLRTC
Ga0066903_1077817251	3300005764	Tropical Forest Soil	MSTAAIRPIAAIPTPEELIARAREMAPEIRALAEETER
Ga0074470_107345542	3300005836	Sediment (Intertidal)	MTAAAVRRLSIPTPDELLDRARAMVPEIRELAEATERNRN
Ga0075276_101348822	3300005898	Rice Paddy Soil	MTSAATYHFPVPTPEELIARAKALVPEIRARAEETEKNRGV
Ga0070717_119546641	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MNTAAVRRLAIPSADELVDRARAMVPEIRALAEETERN
Ga0066665_104817554	3300006796	Soil	MTGAPIRRVALPTPEGLIARARDMAPEIRGLAEETERNRDVPPHIV
Ga0079220_105807462	3300006806	Agricultural Soil	MTTAAIRRLTAVPSPEELIGRAREMVPEIRALAEETERNRNLFPHIVDRIREAELLR
Ga0073928_101570761	3300006893	Iron-Sulfur Acid Spring	MPIAAIRRPAAPGPEELIGRARELVPEIRELSAETERNRNLFPHIVERLRE
Ga0075424_1008626421	3300006904	Populus Rhizosphere	MTTAAIRRLAIPSADELVERARAMVPEIRALAEETERSRNLAPQIVEKFRDAELL
Ga0075424_1026068412	3300006904	Populus Rhizosphere	MTAAPIQRATPPSAEALIARARDMVPEIRALAEETERNRTISP
Ga0099791_105534871	3300007255	Vadose Zone Soil	MTTAAVRRLAVPSPDELVERARAMVPEIRALAEETERNRTIFPHIIEKFREAEL
Ga0066710_1030532092	3300009012	Grasslands Soil	MTTAAVRRLAVPSPDELVERARAMVPEVRALAEETERNR
Ga0066710_1035630382	3300009012	Grasslands Soil	MTTAAVRRLSIPSPDELIERARAMVPEIRALAEETERNRNLF
Ga0066710_1041210431	3300009012	Grasslands Soil	MTTAAIRRLAVPSPDELVDRARAMVPEIRALAEETEKNRQIAPHIIAKF
Ga0099827_104575421	3300009090	Vadose Zone Soil	MTTAAVRRLAVPSPDELVERARAMVPEIRALAEETERNRTI
Ga0066709_1007347973	3300009137	Grasslands Soil	MTTAAVRRLAIPSADELVERARAMAPEIRALAEDTERTRNLSPHIVDKIREAE
Ga0126304_102615923	3300010037	Serpentine Soil	MNSAAVRRLAVPSPDELIARARAMVPEIRALAEETERSRNL
Ga0126380_114550691	3300010043	Tropical Forest Soil	MTTAAVRRLAPPSADELIERARAMVPEIRAVAEETERNRNLLPEIVDRL
Ga0126311_115813942	3300010045	Serpentine Soil	MNSAAVRRLAVPSPDELIARARAMVPEIRALAEETER
Ga0099796_103617231	3300010159	Vadose Zone Soil	VTTAAIRRFAIPTPDELINRARRMAPEIRGLAEETERNRNVLPY
Ga0126376_122856961	3300010359	Tropical Forest Soil	MTTAAIRRFAIPTAEELIDRARGMVPEIRALAEETERNRNVLPHIIDKIRDA
Ga0126372_114249102	3300010360	Tropical Forest Soil	VTTAAIRRFAVPSPDELIDRARGIAPEIRALAEETERNRNVLPHII
Ga0126378_127877762	3300010361	Tropical Forest Soil	LTAAALRRLSIPAADELVERARAMVPEIRELAEATEQNRNVFPHVIEKIR
Ga0126379_137999231	3300010366	Tropical Forest Soil	MTNAAIHRVAPPSPQELIGRALDMVPTIRGLAEETERNRTISPHIIAQIRDA
Ga0126381_1021134432	3300010376	Tropical Forest Soil	VNEVFEVTTAAIRRFAVPSPDELIDRARGMAPEIRAL
Ga0126381_1033040412	3300010376	Tropical Forest Soil	MIDAAIHRVALPTPEELIARARDMVPEIRALAEETERN
Ga0126381_1038959211	3300010376	Tropical Forest Soil	MSTAAIRRFSVPSPEELIDRARGMVPEIRALAEETERN
Ga0126381_1046428881	3300010376	Tropical Forest Soil	MSTAAIRRFAVPSPEELIDRARGMVPEIRALAEETERNRNVL
Ga0134121_108044152	3300010401	Terrestrial Soil	MTTAAIRRLAIPSADELVERARAMVPEIRALAEETERSRNLAPQIVEKFR
Ga0137391_107878241	3300011270	Vadose Zone Soil	MTIAAIRRFAVPSPDELIERARAMVPEIRALAEATERNRNLSPHIVAKIRAAELLRTCRPRE
Ga0137393_102563202	3300011271	Vadose Zone Soil	MTAAAIRRLAIPTPEELIDRARSMVPEIRALAEETERDRNVSPHIIDKIRDA
Ga0137399_109015962	3300012203	Vadose Zone Soil	MTTAAIRRFAVPTPEELIGRARRMVPEIRALAEETERN
Ga0137376_108276251	3300012208	Vadose Zone Soil	MTTAAICRFAVPTSEELIGRARRMVPEIRALAEETERNRNVLPHIIDKIRDAELLRTC
Ga0137379_107749732	3300012209	Vadose Zone Soil	MTTAAVRRLAVPSPDELVERARAMVPEIRALAEETERNRKIF
Ga0137378_114816801	3300012210	Vadose Zone Soil	MTTAGVRRLAVPSPDELVERARAMVPEIRALAEETERNRT
Ga0137377_101666351	3300012211	Vadose Zone Soil	MTTAAIRRLAIPSANELVERARAMAPEIRALAEYTERTRNHSPHIVYKIREGELLRTCRSLMF
Ga0137387_104278812	3300012349	Vadose Zone Soil	MTTAAVRRLAVPSPDELVERARAMVPEIRALAEETERNRTIFPHIIRKFREA
Ga0137366_101832151	3300012354	Vadose Zone Soil	MGRQQDALMTTAAVRRLAVPSPEELVERARAMVPEIRALAAETERNRNLFPHIVEKIRDAELLRT
Ga0137361_106131552	3300012362	Vadose Zone Soil	MRFMTTAAVRRLSVPSPDELIERARAMVPEIRALAPE
Ga0137361_110075201	3300012362	Vadose Zone Soil	MTTAAVRRLAVPSPDELVERARAMVPEIRALAEETERNRKI
Ga0137419_107970211	3300012925	Vadose Zone Soil	MPMTTAAIRRLAIPTPVELIDRARSMAPEIRALAEETERN
Ga0137407_110461161	3300012930	Vadose Zone Soil	VTTAAIRRFAIPTPDELINRARRMVPEIRALAEETERNRNV
Ga0164307_109730941	3300012987	Soil	MTTAAIRRLAIPSADELIERARAMAPEIRALAEETERARNLSPHI
Ga0181535_107046072	3300014199	Bog	MTNAAVRRLAVPSPDELVERARAMVPEIRALAEETERNRAISPD
Ga0167643_10688441	3300015089	Glacier Forefield Soil	MTAATIRRFSIPSPDELVDRARAMVPEIRDLAEATERNRNVFPHII
Ga0182036_116329581	3300016270	Soil	VTTAAIRRFAVPSPDELIDRARGMAPEIRALAEETERNRNVLPRI
Ga0182032_102002432	3300016357	Soil	MTTAAIRRFAVPSPEELIDRARSMVPEIRALAEETERNRNVLPHIIDKIRD
Ga0182032_105890293	3300016357	Soil	MTVAAIRRIAVPSPEELIGRARAMVPEIRALAEETERNRNVLPHVIDMIREAEL
Ga0182034_107988072	3300016371	Soil	MTVAAIRRIAVPSPEELIDRARHMVPEIRALAEETERNRNVLPHI
Ga0182037_108077062	3300016404	Soil	MTVAAIRRIAVPSPEELIARARHMVPEIRALAEETERNRNVLPHII
Ga0182039_105454471	3300016422	Soil	MTVAAISRIAVPSPEELVGRARAMVPEIRALAEETERNRNVLPHVIDRIREAELLRTCRP
Ga0182038_107405942	3300016445	Soil	MTSAAVRLVSPSGPEELIARAKAMVPEIRELAEETE
Ga0187819_108158862	3300017943	Freshwater Sediment	MTSAAIRSTPPPPSPEELIQRARDLVPEIRALAEETERNRRISPKIIAKI
Ga0187780_107288832	3300017973	Tropical Peatland	MTAATIRRLSIPAPDELVERARAMAPEIRELAEETERNRNVSPRIID
Ga0187784_109980581	3300018062	Tropical Peatland	MTAATIRRLSVPSPDELVERARAMVPEIRELAEQTEQNRTIFPHIVQKIRDAELL
Ga0187784_113688021	3300018062	Tropical Peatland	MTAATIRRLSIPSPEELIERARAMVPEIRELAEATEKNRNVFPRIIDKIRDAEL
Ga0187770_108913462	3300018090	Tropical Peatland	MTAAAIRRISIPSPDELVERARAMVPEIRELAEATEQN
Ga0066669_102385393	3300018482	Grasslands Soil	MSTAAIRRLTAVPSPEELIGRAREMVPEIRGLAEETERNRNLFPHIVDKIR
Ga0193749_10990102	3300020010	Soil	MMTAAIRRLAIPSADELVERARAMAPEIRALAEETERTRNLSPHIVDKIR
Ga0210407_100486593	3300020579	Soil	MTSAAVRVVGPSGPEELVARAKAMVPEIRELAEETERNGLSRRT
Ga0210399_111555782	3300020581	Soil	MTAAAIRRFGVPSPEELIERARDMAPEIRALAEETERNR
Ga0210401_115581012	3300020583	Soil	MTAATIRRLSIPSPDELIERARAMAPEIHGFAEETERNRNV
Ga0210406_103746632	3300021168	Soil	MTSAAVRLVAPSGPEELVARAKAMVPEIRELAEETERNGLSRRT
Ga0210400_106749302	3300021170	Soil	MTAAAIRRLSIPPPDELIGRARAMVPEIRELAEETERNRNVFPHIIDKIRDAEL
Ga0213873_102489832	3300021358	Rhizosphere	MTSAAVRLVAPSGPEELIARAKAMVPEIRELAEET
Ga0210393_108766162	3300021401	Soil	MTAAAIRRLSIPSADELVERARAMAPEIRELAEATEQNRNVFPRI
Ga0210389_101906931	3300021404	Soil	MTSAAVRLVAPSGPEELVARAKAMVPEIRELAEET
Ga0210391_100280187	3300021433	Soil	MTAATIRRLSIPSPEELIERARAMVPEIRELAEATEKNRNVFPHVID
Ga0210391_103879813	3300021433	Soil	MTVATVRRLSIPSPEELVERARALVPEIRELAEATEQNRNVFPHIIDKIRDAELL
Ga0187846_101633511	3300021476	Biofilm	MSSAALRRTMPPPSPEELLQRARELAPEIRARAEETEKNRRISPEI
Ga0187846_104756302	3300021476	Biofilm	MTTAAVRRFAVPSPDELIGRARNMVPEIRALAEETERNRNVLPRI
Ga0126371_112269633	3300021560	Tropical Forest Soil	MTGAAVRLTARPTPEELIDRAKAMIPKIRELAEETERNRTISP
Ga0126371_132196611	3300021560	Tropical Forest Soil	MIDAAIHRVALPTPEELIARARDMVPEIRALAEETER
Ga0207699_100285727	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MTGAVIRRVAPPTPEGLIARARDMVPEIRALAEETERNRNVSA
Ga0207707_104994602	3300025912	Corn Rhizosphere	MTAAAIRHLSPPTPEELIGRARAMVPEIRELAQQTEQNR
Ga0207693_102327181	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTSAAVRLVGPSGPEELVARAKAMVPEIRELAEETERNGLSRRT
Ga0207659_117670262	3300025926	Miscanthus Rhizosphere	MTNAAIRHLSIPSPDELIGRAGAMVPEIRELAQQTEENRGLFPQIVDKIRAAEL
Ga0207700_110609891	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTSAAIRRVAPPTPEELIARARDIVPEIRALAEETER
Ga0209647_12230811	3300026319	Grasslands Soil	MSTAAIRRLAAVPSPEELIGRAREMVPEIRALAEQTERNRNLLPHIV
Ga0209687_11019861	3300026322	Soil	MTTAAIRRLAIPSADELVERARAMAPEIRALAEETERTRNL
Ga0209057_11452332	3300026342	Soil	MTTAAVRRLAIPSADELVERARAMAPEIRALAEDTERTRNLSPHIVD
Ga0209378_11942302	3300026528	Soil	MTTAAIRRFAIPTPEELIDRARGMVPEIRVLAEETERNRNVLPLII
Ga0209648_104167221	3300026551	Grasslands Soil	MTTAAVRRLSVPSPDELIERARAMVPEIRALAQETERNRNL
Ga0209527_11363982	3300027583	Forest Soil	MTTAAIRRLAIPTPVELIDRARSMVPEIRALAEETERNRNVF
Ga0208981_10694261	3300027669	Forest Soil	MTTAAVRRLAIPSPDELIERARAMVPEIRALAEETERNRTLLPQ
Ga0209726_104369871	3300027815	Groundwater	MTSATIRRLAAPSPDELVLRARAMVPEIRALAEETERNR
Ga0209040_103535231	3300027824	Bog Forest Soil	MTTAAIRRFAIPSPEELIQRARGMVPEIRALAEETERNRNVLPH
Ga0209488_103667012	3300027903	Vadose Zone Soil	MTTAAVRRLATPSPDELVNRARAMAPDIRALAEETERNRTLLPQIVEQI
Ga0207428_110939611	3300027907	Populus Rhizosphere	MTAAPIERATPPSAEALIARARDMVPEIRALAEETERNR
Ga0222749_103059751	3300029636	Soil	MTTAAVRRLSIPSPDELLERARAMVPEIRALAEQTERNRNLFPHIVDKIREAELLRTCR
Ga0222749_105419372	3300029636	Soil	MTSAAVRLVAPSGPEELVARAKAMVPEIRELAEETE
Ga0308193_10815082	3300031096	Soil	MTSAAVRLVAPSGPEELIARAKAMVPEIRELAEETERNR
Ga0170818_1000379371	3300031474	Forest Soil	VTTAAIRRFAIPTPDELINRARRMVPEIRALAEETERNRNVLPH
Ga0318516_102066842	3300031543	Soil	MTTAAIRRFAVPSPEELIDRARGMVPEIRALAEETEHNRNVLPHIIDKIREAELLRT
Ga0318516_102796181	3300031543	Soil	MTTAAIRRFAVPSPEELIDRARSMVPEIRALAEETERNRNVLPHII
Ga0318541_106170222	3300031545	Soil	MTSAAIRRAAPPAPEELIRRARDLVPEIRALAEETERNRTIS
Ga0318561_103287822	3300031679	Soil	MTVAAIRRIAVPSPEELIDRARHLVPEIRALAEETERNRYVLPHI
Ga0318561_104588652	3300031679	Soil	MTSAAVRLVSPSGPEELIARAKAMVPEIRELAEETEHNRTIS
Ga0318572_103732871	3300031681	Soil	MTTAAIRRFAVPSPEELIDRARGMVPEIRALAEETEHNRNVLPHIIDKI
Ga0318560_105503392	3300031682	Soil	MTVAAIRRIAVPSPEELIARARHMVPEIRALAEETERN
Ga0306917_114067041	3300031719	Soil	MTVAAIRRIAVPSPEELIARARHMVPEIRALAEETERNRNVLPHIIDKIRD
Ga0318500_100800651	3300031724	Soil	MTSAAIRRKVAQPSPEELVARARDMIPEIRALAEETE
Ga0318492_102487831	3300031748	Soil	MTTAAIRRFSVPSPEELIDRARGMVSEIRSLAEETER
Ga0318535_105330561	3300031764	Soil	MTSAAIRRKVAQPSPEELVARARDMIPEIRALAEETER
Ga0318543_100950842	3300031777	Soil	MTTAAIRRFAVPSPEELIDRARNMVPEIRSLAEETERNRTVKAQ
Ga0318543_101323222	3300031777	Soil	MTSAAIRRKVAQPSPEELVARARDMIPEIRPLAEETER
Ga0318547_106341671	3300031781	Soil	MTSAAVRLVSPSGPEELIARAKAMVPEIRELAEETEHN
Ga0318548_104331282	3300031793	Soil	MTVAAISRIAVPSPEELVGRARAMVPEIRALAEETERNRNVLPHVIDRIREAELLRTC
Ga0318557_103587991	3300031795	Soil	MTTAAIRRFAVPSPEELIDRARSMVPEIRALAEETERNRNVLPH
Ga0318499_102485361	3300031832	Soil	MVLCNRHRRVTQMTTAAIRRFAIPTPEELIGRARGVVPEIRSLAEETERNRNVFPHIIDKIRDAE
Ga0318527_103936102	3300031859	Soil	MTTAAIRRFSVPSPEELIERARAMVPEIRSLAEETE
Ga0318536_101252201	3300031893	Soil	MTTAAIRRFAVPSPEELIDRARSMVPEIRALAEETERNRNVLPHIIDK
Ga0318536_106691031	3300031893	Soil	MTSAAVRLVSPSGPEELIARAKAMVPEIRELAEETEHNRTISPRI
Ga0306921_101844264	3300031912	Soil	MTVAAIRRIAVPSPEELIDRTRQMVPEIRALAEETERNRNVLP
Ga0308175_1011280202	3300031938	Soil	MSTAAIRRLAVPSPDELIARARAMVPEIRALAEQTERNRNL
Ga0310916_112826191	3300031942	Soil	MTIAAIRRFAVPSPEELVDRARSMVPEIRALAEETERNRNVLPR
Ga0310916_113458211	3300031942	Soil	MTVAAIRRIAVPSPEELIARARHMVPEIRALAEETERNRNVLPHIIDK
Ga0310910_102795433	3300031946	Soil	MTVAAISRIAVPSPEELVGRARAMVPEIRALAEETERN
Ga0310910_112840162	3300031946	Soil	MTTAARRRFSVPSPEELIDRARAMVPEIGALAEETERNRNV
Ga0306926_124326342	3300031954	Soil	MTVAAISRIAVPSPEELVGRARAMVPEIRALAEETERNRNVLPH
Ga0326597_102589024	3300031965	Soil	MTNAAIRRLAAPSPDELVDRARAMVPEIRALAEETERNRKISPHIIAKFRDAELL
Ga0306922_104047833	3300032001	Soil	MTVAAISRIAVPSPEELVGRARAMVPEIRALAEETERNRNVLPHVIDMIREAELL
Ga0306922_115024021	3300032001	Soil	MSTAAIRRFAVPSPEELIDRARGMVPEIRALAEETERNRNVLPDIIDMIRE
Ga0310911_100633843	3300032035	Soil	MTTAAIRRFAVPSPEELIDRARGMVPEIRALAEETEHNRNVLPHIIDKIREAELLRTC
Ga0310911_106412221	3300032035	Soil	MSTAAIRRFVVPRPEELIDRARGMVPEIRSLAEETERNR
Ga0310911_107865692	3300032035	Soil	MTVAAISRIAVPSPEELVGRARAMVPEIRALAEETE
Ga0318556_101834372	3300032043	Soil	MTTAAIRRFAVPSPEELIDRARSMVPEIRALAEETERNRNVLPHI
Ga0318533_108087501	3300032059	Soil	MSTAAIRRFAVPSPEELIDRARGMVPEIRALAEETERNRNVLPDII
Ga0318533_111771631	3300032059	Soil	MTSAAIRRAAPPAPEELIRRARDLVPEIRALAEETERNRTISPRDHRQGS
Ga0318553_103756621	3300032068	Soil	MTSAAIRRKVAQPSPEELVARARDMIPEIRALAEETERNRTIS
Ga0306924_115552452	3300032076	Soil	MTSAAIRRAAPPAPEELIRRARDLVPEIRALAEETERNRTISPEIIA
Ga0318518_106030331	3300032090	Soil	MTVAAISRIAVPSPEELVGRARAMVAEIRALAEETERNRNVLPHVIDMIREAELLR
Ga0306920_1001206141	3300032261	Soil	MTVAAIRRIAVPSPEELIDRTRQMVPEIRALAEETERNRNVLPHII
Ga0335082_113401761	3300032782	Soil	MTTAAIRHLAAPSPDELVERARAMVPEIRTLAEETEKNRRIAPHIIRKFREA
Ga0335081_104056325	3300032892	Soil	MTTAAIRRLAVPSPDELVDRAGAMAPEIRALAEET
Ga0335076_111818062	3300032955	Soil	MTAAAIRRLSVPSPDELVERARAMAPEIRERAEAT
Ga0335077_101235644	3300033158	Soil	MTAATIRRLSIPTPDELIARARSLVSEIRELAEET
Ga0310914_114348191	3300033289	Soil	VTTAAIRRFAVPSPDELIDRARGMAPEIRALAEETERNRNVLPRIIDKI

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign