NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F043848

Metagenome / Metatranscriptome Family F043848

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F043848
Family Type Metagenome / Metatranscriptome
Number of Sequences 155
Average Sequence Length 78 residues
Representative Sequence MIQSFQTGNCDWKPLYEAALLETDLTKLPERITTARSAILDRIEESFTHSLPGEHRAMDVALTNLRRLAQLTTSRAA
Number of Associated Samples 98
Number of Associated Scaffolds 155

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 68.18 %
% of genes near scaffold ends (potentially truncated) 21.94 %
% of genes from short scaffolds (< 2000 bps) 78.06 %
Associated GOLD sequencing projects 89
AlphaFold2 3D model prediction Yes
3D model pTM-score0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (90.968 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(27.097 % of family members)
Environment Ontology (ENVO) Unclassified
(32.903 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(56.774 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 50.48%    β-sheet: 0.00%    Coil/Unstructured: 49.52%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

10203040506070MIQSFQTGNCDWKPLYEAALLETDLTKLPERITTARSAILDRIEESFTHSLPGEHRAMDVALTNLRRLAQLTTSRAASequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.70
Powered by PDBe Molstar

Structural matches with SCOPe domains



 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
91.0%9.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Vadose Zone Soil
Tropical Forest Soil
Grasslands Soil
Surface Soil
Soil
Sugarcane Root And Bulk Soil
Soil
Grasslands Soil
Forest Soil
Soil
Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Arabidopsis Rhizosphere
Avena Fatua Rhizosphere
Corn Rhizosphere
8.4%27.1%16.8%3.2%20.6%6.5%3.2%3.2%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
soilH2_10041439113300003324Sugarcane Root And Bulk SoilMQFSSTSADWRPLYEAALLEGDPEKLSERIIKARSAILDRIEETLTHPSLHGEQRAMNDALTNLKRLADTRVLDAT*
soilH2_1020878233300003324Sugarcane Root And Bulk SoilMETDWKPLYEAAVLEADAGKLRERITMARSAIFDRIEESLTHPLPGEHQAMNDALRNLRRLAAVSSSRNVA*
Ga0062590_10075486123300004157SoilVGHVHFGSRDWLPLYEAALLETDADKLPERITKARNAILDRIEESLTHPIPGEQTAMDDALRSLRRLAKIAARKSA*
Ga0066672_1079951823300005167SoilMIQSFQTGNCDWKPLYEAALLETDLTKLPERITTARSAILDRIEESFTHSLPAEHRAMDVALTNLRRLAQSTTSHAA*
Ga0066683_1031108633300005172SoilMIQCLQSGNCDWEPLYEAALLETDLTKLPERITTARSAILDRIEESFTHSLPGEHRAMDVALTNLRRLAQSTTSRAA*
Ga0066673_1062128913300005175SoilMYFAQSNSRDWKPLYEAALLETDGSKLPERITAARTAILDRIEESLTSPLPSEHRVMNDALRNLRRLAEGMTRNAA*
Ga0066679_1013293623300005176SoilMQSFRSSGRDWKPLYEAVLLETDVTKLPERITTARSAILDRIEESFRHSLAGEHRAMDEALRHLRRLAETTTSRNVA*
Ga0066688_1007856233300005178SoilMPLVQAADWKPLYKAALLETDGSKLPQRITAARTAILDRIEESLTSPLPSEHRAMDDALRSLRRLAEVMAARNAA*
Ga0066688_1022032023300005178SoilMMQFFQSGNGDWKPLYEAALLETDLTKLPERITTARSAILDRIEESFTHSLPGEHRAMDVALTNLRRLAQSTTSRAA*
Ga0066684_1000829693300005179SoilLLALSLPKGVDDYSRMIQSSQSSNCDWRPLYEAALLEADVAKLPERITVARSAILDRIEETFVHSLPGEQRAMDEALRNLRRLAQLTTTAQRK*
Ga0066685_1090997413300005180SoilMIQSFQSGNCDWKPLYEAALLETDLKKLPERITTARSAILDRIEESFTHSLPAEHRAMDVALTNLRRLAQSTTSRAA*
Ga0066676_1100815423300005186SoilMEDYLPMIQCSQSGNCDWMPLYEAAVFETDVTKLAERITAARGAILDRIEESFAHSLPGEQRAMDQALRNLRSLAQLTITRSA*
Ga0066675_1006821923300005187SoilLLALSLPKGVDDYSRMIHSSQSSNCDWRPLYEAALLEADVAKLPERITVARSAILDRIEETFVHSLPGEQRAMDEALRNLRRLAQLTTTAQRK*
Ga0066675_1033542413300005187SoilMMYFAQSNSHDWKPLYDAALLETDGSKLPERITVARTAILDRIEESLTSPLPSEHRVMNDALRNLRRHAEGMTRNAA*
Ga0066675_1068214213300005187SoilMIQCSQSGNCDWMPLYEAAVFETDVTKLAERITAARGAILDRIEESFAHSLPGEQRAMDQALRNLRSLAQLTITRSA*
Ga0066388_10014211863300005332Tropical Forest SoilMEHSHSSHADWQALYEAAMLEADVDKLPELITVARSAILDRIEESLTHPVPGEQRAMNYALTMLHRLAQTNTIGRAA*
Ga0066388_10076470333300005332Tropical Forest SoilMQHFQSKATDWIPLYEMALLEADAGKLPQRITIARSAIFDRIEESLTHPLPGEQRAMDDALRNLRRLAQIGNAKSSA*
Ga0066388_10143029613300005332Tropical Forest SoilMAHSQSPGKDWKSLYELALSETDAGKLPERITMARSAILDRIEESLTHTFPGEQRAIDDALRNLGRLARSSTTTRSAA*
Ga0066388_10274630233300005332Tropical Forest SoilMEYFHSDSKHWKPLYEAALLESDSTKLPERITTARSAILDRIEESLTHPLPGEHRAMDDALRNLRRLAAPTLTKNAA*
Ga0066388_10505193713300005332Tropical Forest SoilMGNFQPESTDWRSLYEMARLEADANKLPERIAIARTAILDRIEESLTNPLPGEQRAMDDALRTLRRLAMTTTSTKAA*
Ga0070709_1120975723300005434Corn, Switchgrass And Miscanthus RhizosphereMIQSSQSGNCDWKLLYEAALLETDVTKLPQRITAARSAILDSIEENFTHSLLGEHRAMDEALRNLRRLAQSTKSRAA
Ga0070710_1028805013300005437Corn, Switchgrass And Miscanthus RhizosphereMIQSSQRETCDWKPLYEAALGETDVAKLPNRITMARSAILDRIEESFSHSLPDEHRAMDDALRNLRRLAQSATSRAA*
Ga0066689_1084957123300005447SoilMIQSFQTGNCDWKPLYEAALVETDLTKMTERITTASSAILDRIEESFTHSLPGEHRAMDVALTNLRRLAQSTTSRAA*
Ga0070732_1001588823300005542Surface SoilMIQSFQSGTCDWKPLYQAALLETDVTKLPQRITAARSAILDRIEESFTHSLLGEHRAMDEALRNLRRLALLTTSRAA*
Ga0070732_1008570623300005542Surface SoilMIQSSQSGNCDWKPLYKAALLETDVTKLPQRITAARTAILDRIEESFTRSLLGEHRAMDDALRNLRRLAQLTTSRAA*
Ga0070732_1027407323300005542Surface SoilMIQSSQSGNCDWKPLYEAALLETDVTELPQRITAARSAILDTIEESFTHSLLGEHCAMDDALRNLRRLVHLTTSRAA*
Ga0066661_1006481713300005554SoilVIQSFQSGNGDWKPLYEAALLETDLTKLPERITTARSAILDRIEESFTHSLPAEHRAMDVALTNLRRLAQSTTSRAA*
Ga0066707_1008923533300005556SoilMIQSFQFGNCDWKPLYEAALLETDLTKLPERITTARSAILDRIEESFTHSLPAEHRAMDVALTNLRRLAQSTTSRAA*
Ga0066670_1036642013300005560SoilSLPKGVDDYSRMIQSSQSSNCDWRPLYEAALLEADVAKLPERITVARSAILDRIEETFVHSLPGEQRAMDEALRNLRRLAQLTTTAQRK*
Ga0066705_1094842013300005569SoilMIQSFQFGNCDWKPLYEAALLETDLTKLPERITTARGAILDRIEESFTHSLPGEHRAMDVALTNLRRLAQSTTSRAA*
Ga0066706_1018419223300005598SoilMMQFFQSGNGDWKPLYEAALLETDLTKLPERITTARSAILDRIEESFTHSLPAEHRAMDVALTNLRRLAQSTTSHAA*
Ga0070717_1155652713300006028Corn, Switchgrass And Miscanthus RhizosphereSRDWKPLYEAALCETDIAKLPERIITARSAILDRIEESFTHSLLGEHRAMDDALRRLRRLAKMTTSRGVA*
Ga0066696_1003436053300006032SoilLFPDDPITQSSNCDWRPLYEAALLEADVAKLPERITVARSAILDRIEETFVHSLPGEQRAMDEALRNLRRLAQLTTTAQRK*
Ga0066652_10120795923300006046SoilMIQSSQSSTCDWRPLYEAALLEADVAKLPERITVARSAILDRIEETFVHSLPGEQRAMDEALRNLRRLAQLTTTAQRK*
Ga0066665_1005209743300006796SoilMIQSFQSGNGDWKPLYEAALLETDLTKLPERITTARSAILDRIEESFTHSLPAEHRAMDVALTNLRRLAQSTTSRAA*
Ga0066665_1040869823300006796SoilMHFVQSNSPDWKPIYEAALLETDGSKLPERITAARTAILDRIEESLTSPLPSEHRAMDDALRNLRRLAERMTRNAA*
Ga0066659_1107444913300006797SoilMIQSFQAGNCDWKSLYEAALLETDVTKLPERITTARSAILDRIEESFTHSLPGEHRAMDVALTNLRRLAQSTTSRAA*
Ga0066659_1154679813300006797SoilDWKPLYDAALLETDGSKLPERITAARTAILDRIEESLTSPLPSEHRVMNDALRNLRRLAEGMTRNAA*
Ga0066710_10076715813300009012Grasslands SoilMIQCLQSGNCDWEPLYEAALLETDLTKLPERITTARSAILDRIEESFTHSLPGEHRAMDVALTNLRRLAQSTTSRAA
Ga0066709_10116478123300009137Grasslands SoilMIQCLQFGNCDWEPLYEAALLETDLTKLPERITTARSAILDRIEESFTHSLPGEHRAMDVALTNLRRLAQSTTSRAA*
Ga0066709_10142028823300009137Grasslands SoilMPLVQAADWKPFYKAALLETDGSKLLQRITGARTAILDRIEESLTSPLPSEHRAMDDALRSLRRLAEVMAARNAA*
Ga0066709_10375401313300009137Grasslands SoilMHNFRFSNADWKPLYNAAVLETDITKLPERITTARSAIFDRIEESFAHSLQGEHRAMDEALRHVRRLAVTTASRNVA*
Ga0126384_1045149123300010046Tropical Forest SoilMQHFQSKGTDWIPLYEMALLETDAGKLPQRITMARSAIFDRIEESLKHPLPGEQRAMDNALRNLRRLGTTTNQIKAA*
Ga0126382_1170731013300010047Tropical Forest SoilMQYFDSNKTDWKTLYEAALLETDATRLVERITIARSAILDRIEECFTQSLPGEQRAMDDALRNLRRLAEGR
Ga0126373_10001395123300010048Tropical Forest SoilMEWKDLYEAALLETDAGKLPDRITTAKSAILDRIEESFTHPLPGEHRAMGEALRDLRRLAEKAISKQAA*
Ga0126373_1000652033300010048Tropical Forest SoilMDWKQLYELLETDSDKLPERITTARSAILVRIEESFAHPLPGEHRAMDEALSDLRRLAAMATSKHAAREAVHSCA*
Ga0126373_1026573643300010048Tropical Forest SoilMEWKQLYEAAMLETDSDKLRERITTARIAILERIEESFAHPLPGEHRAMDEALRELRRLAAMAISKHAA*
Ga0126373_1040521923300010048Tropical Forest SoilMAQVASNTDWKQLYQAALLETDTEKLPERITTARSAILDRIEESFTHPLPCEQRAMDEALRGLRRLAALLKHAA*
Ga0126373_1056894113300010048Tropical Forest SoilQLYQAALLETDTDKLPERITTARTAILDRIEVSFMHPLPGEHRALDEALRGLRRLAAMSKHAA*
Ga0126373_1082171333300010048Tropical Forest SoilMEWKDLYEAALLETDAGKLPDRITTAKSAILDRIEESFTHPLPGEHRALGEALRDLRRLAEKAISKQAA*
Ga0126373_1300066623300010048Tropical Forest SoilMERFQSTGTDWKPLYELALLETDVGKLPQRITTARSAIFDRIEESLKHPLPGEHRAVDDALRNLRRLATLNATRALLRGTPSCKAK*
Ga0134109_1016744613300010320Grasslands SoilMIHSSQSSNCDWRPLYEAALLEADVAKLPERITVARSAILDRIEETFVHSLPGEQRAMDEALRNLR
Ga0126370_1001812273300010358Tropical Forest SoilMEHSHSSHADWQALYEAAMLEADVDKLPELITVARSAILDRIEESLAHPVPGEQRAMNYALTMLHRLAQTNTIGRAA*
Ga0126370_1004186733300010358Tropical Forest SoilVAQFASSTEWKQLYQAALLETDTDKLPERITTARTAILDRIEVSFMHPLPGEHRALDEALRGLRRLAAMSKHAA*
Ga0126370_1040436023300010358Tropical Forest SoilMQHFQCKGTDWIPLYEMALLETDAGKLPQRITMARSAIFDRIEESLKHPLPGEQRAMDNALRNLRRLAMITTPMKAA*
Ga0126376_1052398133300010359Tropical Forest SoilMEYVHSNSGNWKPLYEVALLETDAGKLPERITTARNAILDRIEETLTCPLPGEHRAMDDALRNLRGLARIIEAQKAA*
Ga0126376_1134744923300010359Tropical Forest SoilMQHFQSKDTDWLPLYEMALLETDAGKLSERITSARSAIFDRIEESLTHPLPGEQRAMDDALRNLRRLAQITTARTAA*
Ga0126376_1160626023300010359Tropical Forest SoilMQHFQSKGTDWIPLYEMALLETDAGKLPQRITMARSAIFDRIEESLTHPLAGEQRAMDDALRNLRRLAQVG
Ga0126376_1274908923300010359Tropical Forest SoilMAQFASGTEWKQLYQAALLEMDRDKLPERITTARSAILDRIEESFTHPLPCEQRAMDEALRGLRRLAALLKHAA*
Ga0126372_1000097233300010360Tropical Forest SoilMEHSHSSHADWQALYEAAMLEADVDKLPGLITVARSAILDRIEESLTHPVPGEQRAMNYALTMLHRLAQTNTIGRAA*
Ga0126378_1245850723300010361Tropical Forest SoilLETDSDKLPERITTARSAILVRIEESFAHPLPGEHRAMDEALSDLRRLAAMATSKHAAREAVHSCA*
Ga0126379_1071754613300010366Tropical Forest SoilRSAENRLRNSMAQVASNTDWKQLYQAALLETDTEKLPERITTARSAILDRIEESFTHPLPCEQRAMDEALRGLRRLAALLKHAA*
Ga0126379_1101044023300010366Tropical Forest SoilKQVYEAALLETDSDKLPERITTARSAILVRIEESFAHPLPGEHRAMDEALSDLRRLAAMATSKHAAREAVHSCA*
Ga0126379_1155224113300010366Tropical Forest SoilMQYFDSTSKDWKSLYEAALLETDPKKLTERITIARSAILDRIEESFTHSLPGEQRAMDDALRNLRLLAVGSLARSAA*
Ga0126381_10005351933300010376Tropical Forest SoilMAQPASSTDWKHLYQAALLEPDRDKLAERITTARSAILDRIDESFTHPLPGEHRALGEALRDLRRLAEMGISKQAA*
Ga0126383_1195884323300010398Tropical Forest SoilMEHVHSPSTDWKPLYEAALLETDAGKLPERITVARSAIFDRIEESLTRTLPGEQRAMDNALKNLRRLATLTTQSAA*
Ga0137364_1045406113300012198Vadose Zone SoilMIHSSQSSNCDWRPLYEAALLEADVAKLPERITVARSAILDRIEETFVHSLPGEQRAMDEALRNLRRLAQLTTTAQRK*
Ga0137364_1056387923300012198Vadose Zone SoilMIPSFQPDNRDWKRLYEAAVLETDLTKLPERIITARSAILDRIEESFTHSLPGEHRAMDVALTNLRRLAKLTTSRAA*
Ga0137383_1016372223300012199Vadose Zone SoilMIQSFQSGNCDWKPLYEAALLETDLTKRPERITTARSAILDRIEESFTHSLPGEHRAMDVALTNLRRLAQLTTSRAA*
Ga0137382_1093870713300012200Vadose Zone SoilMQSFRSSGPDWKPLYEAVLLETDVTKLPERITTARSAILDRIEESFRHSLAGEHRAMDEALRHLRRLAETTTSRNVA*
Ga0137382_1105759413300012200Vadose Zone SoilMIQSFQTGNGDWKPLYEAALLETDLTKLPERITTARSAILDRIEESFTHSLPGEHRAMDVALTNLRRLAKLTTSRAA*
Ga0137365_1034288123300012201Vadose Zone SoilMIQPSQPDNCDWKPLYEAALSEADERKLLERIAAARMAILDRIEVSLTTSRLPGEHRAMDDALRNLRRLAKLMPTRTAA*
Ga0137365_1045304223300012201Vadose Zone SoilMIPSFQPDNRDWKRLYEAALSETDLTKLPERIITARSAILDRIEESFIHSLPGEHRVMDVALANLRRLGKLTTSRPA*
Ga0137380_1052763023300012206Vadose Zone SoilMHFVPSNSPDWKPLYEAALLETDASKLLERISVARSAILDRIEESLRNPSPGEHRVMNDALRNLRRLAK*
Ga0137376_1064682313300012208Vadose Zone SoilFQTGNGDWKPLYEAALLETDLTKLPERITTARSAILDRIEESFTHSLPGEHRAMDVALINLRKLAQLSASRAA*
Ga0137376_1127114413300012208Vadose Zone SoilMEHFQSKSTDWIPLYEMALLETEAGKLHERITIARSAIIDRIEESLTHPLPGEQRAMDDALRNLR
Ga0137376_1140243923300012208Vadose Zone SoilMPFVNASDWKPLYEAALLETDGSKLPERLTAARTAILDKIEESLTSPFPSEHRAMDDALRNLRRLTVMAARNAA*
Ga0137376_1144320623300012208Vadose Zone SoilMIPSFQPDNRDWKRLYEAAVLETDLTKLPERITTARSAILDRIEESFTHSLPGEHRAMDVALTNLRRLAKLTTSRAA*
Ga0137379_1007463023300012209Vadose Zone SoilMQSFLSSSPDWKPLYQAVLLETDVTKLHERIITARSAILDRIEETFRHSLAGEHRAMDEALRNLRRIAVTTTSRNVA*
Ga0137379_1033414423300012209Vadose Zone SoilMIQSFQTGNCDWKPLYEAALLATDLTTLPERITTARSAILDRIEESFTHSLPGEHRAMDVALTNLRRLAQLTTSRAA*
Ga0137378_1010563523300012210Vadose Zone SoilMIQFFQAGNCDWKPLYEAALLETDLTKLPERITTARSAILDRIEESFTHSLPGEHRAMDVALTNLRRLAQLTTSRAA*
Ga0137378_1054778133300012210Vadose Zone SoilMIRAMQSAHSGSDWKPLFEAALLETDAIKLPERITTARSAILDRIEESLTNPVASEQGAMDNALRSLRRLAQIAIDRKSRLI*
Ga0137377_1101553123300012211Vadose Zone SoilMIQSFQTGNCDWKPLYEAALLETDLTKLPERITTARSAILDRIEESFTHSLPGEHRAMDVALTNLRRLAQLTTSRAA*
Ga0150985_12139524413300012212Avena Fatua RhizosphereMEHFRFNQTDWKPLYEAALLENDAVKLPNRIILARSAIFDRIEESLTRPVPGEHRAMDDALRTLRKLAQSGTARSAA*
Ga0137387_1107222823300012349Vadose Zone SoilMPLILAGSGWKPLYEAVLLETDGSKLPERITIARTAILDRIEESLTSPLPSEHRAMDDALRNLRRLAEVMAAKNGMNRSI*
Ga0137372_1010580233300012350Vadose Zone SoilMRSVLPCSDWKLLYEAALLETDGSKLPERITVARAAILDRIEESLRSPLPSEHRAMDDALRNLRRLAKVMAARTVA*
Ga0137372_1032918013300012350Vadose Zone SoilSPHWKPLYEAALLETDGSKIPERITTARSAILDRIEESLTNPLASEQRAMDNALRRLRRLAQITMTRNVV*
Ga0137372_1038006323300012350Vadose Zone SoilMIPSFQPDNRDWKRLYEAALSETDLTKLPERITTARSAILDRIEESFVHSLPGEHRVMDVALTNLRRLGKLTTSRPA*
Ga0137372_1046116023300012350Vadose Zone SoilVIPSFQPGNCDWKNWKPLYEAALLETDVIKLPERITTARSAILDRIEESFTRSLPGEQRAMDDALRKLRRLEQLTT*
Ga0137372_1086752923300012350Vadose Zone SoilNCDWKPLYEAALSEADERKLLERIAAARMAILDRIEVSLTTSRLPGEHRAMDDALRNLRRLAKLMPTRTAA*
Ga0137367_10000998193300012353Vadose Zone SoilMIQSSQPDNCDWKPLYEAALSEADERKLLERITAARMAILDRIEVSLTTSRLPGEHRAMDDALRNLRKLARLRTSRAA*
Ga0137367_1005353353300012353Vadose Zone SoilMIQPSQPDNCDWKPLYEAALSEADERKLLERSAAARMAILDRIEVSLTTSRLPGEHRAMDDALRNLRRLAKLMPTRTAA*
Ga0137367_1005555823300012353Vadose Zone SoilMIQPSQPDNCDWKPLYEAALSEPDERKLLERIAAARMAILDRIEVSLTTSRLPGEHRAMDDALRNLRRLAKLMSTRTAA*
Ga0137367_1083008433300012353Vadose Zone SoilFQPDNRDWKRLYEAALSETDLTKLPERIITARSAILDRIEESFIHSLPGEHRVMDVALANLRRLGKLTTSRPA*
Ga0137366_1004207143300012354Vadose Zone SoilMEHFQSKSTDWIPLYEMALLETDAGKLHERITIARSAIIDRIEESLTHPLPGEQRAMDDALRNLRRLAQIPTMRSAA*
Ga0137366_1007425533300012354Vadose Zone SoilMQSAHSSPHWKPLYEAALLETDGSKIPERITTARSAILDRIEESLTNPLASEQRAMDNALRRLRRLAQITMTRNVV*
Ga0137366_1021833923300012354Vadose Zone SoilMIQPSQPGNCDWKPLYEAALSEADERKLLERIAAARMAILDRIEVSLTTSRLPGEHRVMDEALRNLRKLARLRTSHAA*
Ga0137366_1085333923300012354Vadose Zone SoilLALSLPQKWDNYSRVIPSFQPDNRDWKRLYEAALSETDLTKLPERITTARSAILDRIEESFVHSLPGEHRVMDVALTNFRRLGKLTTSRPA*
Ga0137371_1019785123300012356Vadose Zone SoilMIPSFQPDNRDWKRLYEAALSETDLTKLPERIITARSAILDRIEESFTHSLPGEHCAMDVALTNLRRLARLTTSRAA*
Ga0137371_1046905213300012356Vadose Zone SoilPKGYGFLMQGFQSSSPDWKPLYQAVLLETDITKLPERITTARSAILDRIEESFKHSLAGEHRAMDEALRHLRGLAATSASRNVA*
Ga0137384_1003736613300012357Vadose Zone SoilMQSFRSSSPDWKPLYEAALLETDVAKLPERITTARSAILDRIEESFRHSLAGEHRAMDDALRHLRRRSLDLRPNRSFVGR*
Ga0137384_1021921133300012357Vadose Zone SoilMIQFFQAGNCDWKPLYEAALLETDLKKLPERITTARSAILDRIEESFTHSLPGEHRAMDVALTNLRRLAQLTTSRAA*
Ga0137368_1081949813300012358Vadose Zone SoilMIQPSQPDNCDWKPLYEAALSEPDERKLLERIAAARMAILDRIEVSLTTSRLPGEHRAMDDALRNLRKLARLRTSRAA*
Ga0137385_1026484233300012359Vadose Zone SoilMQSFLSSSPDWKPLYQAVLLETDVTKLHERIITARSAILDRIEETFRHSLAGEHRAMDEALRNLRRLAVTTTSRNVA*
Ga0137375_1058085813300012360Vadose Zone SoilLPCSDWKLLYEAALLETDGSKLPERITVARAAILDRIEESLRSPLPSEHRAMDVALRTLRRLATVMTARIATQRSN*
Ga0137373_1017214423300012532Vadose Zone SoilLALSLPQKWDNYSRVIPSFQPDNRDWKRLYEAALSETDLTKLPERITTARSAILDRIEESFVHSLPGEHRVMDVALTNLRRLGKLTTSRPA*
Ga0137359_1129997233300012923Vadose Zone SoilDYDWKPLYQAAVLETDITKLPERITTARSAILDRIEESFTHSLPGEHRAMDDALRNLRRLAQVTTSHAA*
Ga0137413_1050249923300012924Vadose Zone SoilWKPLYQAVLLETDVTKLPEQITTARSAILDRIEENFRHSLAGEHRAMDEALRHLRRLAETTTSRNVA*
Ga0137404_1003627653300012929Vadose Zone SoilMEHFQSKSTDWIPLYEMALLETDAGKLHERITIARSAIIDRIEESLTHPLPGEQRAMEDALRNLRRLAQNPTMRSAA*
Ga0134110_1056034713300012975Grasslands SoilMMQFFQSGNGDWKPLYEAALLETDLTKLPERITTARSAILDRIEESFTHSLPGEHRAMDVALTNLRRLAQLTTSRAA*
Ga0157372_1236082323300013307Corn RhizosphereHVHFGSRDWLPLYEAALLETDADKLPERITKARNAILDRIEESLTHPIPGEQTAMDDALRSLRRLAKIAARKSA*
Ga0134079_1032360623300014166Grasslands SoilMMYFAQSNSRNWKPLYDAALLETDGSKLPERITAARTAILDRIEESLTSPLPSEHRVMNDALRNLRRLAEGMTSNAA*
Ga0134072_1010744723300015357Grasslands SoilMIQSSQSSNCDWRPLYEAALLEADVAKLPERITVARSAILDRIEETFVHSLPGEQRAMDEALRNLRRLAQLTTTAQRK*
Ga0132258_1025348813300015371Arabidopsis RhizosphereMEHFDSTSKDWKPLYEAALLETDAKKLAERIAIARSAILDRIEESLTHPLLGEQRAMDDALRNLRRLARVSLVRSAA*
Ga0132257_10050378543300015373Arabidopsis RhizosphereRAMEHFDSTSKDWKPLYEAALLETDAKKLAERIAIARSAILDRIEESLTHPLLGEQRAMDDALRNLRRLARVSLVRSAA*
Ga0066667_1023965033300018433Grasslands SoilMPLVQAADWKPFYKAALLETDGSKLLQRITAARTAILDRIEESLTSPLPSEHRAMDDALRSLRRLAEVMAARNAA
Ga0066667_1042319923300018433Grasslands SoilMMQFFQSGNGDWKPLYEAALLETDLTKLPERITTARSAILDRIEESFTHSLPGEHRAMDVALTNLRRLAKLTTSRAA
Ga0066667_1089770013300018433Grasslands SoilHSRMIQCLQFGNCDWEPLYEAALLETDLTKLPERITTARSAILDRIEESFTHSLPGEHRAMDVALTNLRRLAQSTTSRAA
Ga0066662_1094957723300018468Grasslands SoilMLSAHSGSDWKPLFEAALLETDAIKLPERITTARSAILDRIEESLTNPVASEQGAMDNALRSLLRLAQIAMTGKAT
Ga0066669_1015334823300018482Grasslands SoilLLALSLPKGVDDYSRMIHSSQSSNCDWRPLYEAALLEADVAKLPERITVARSAILDRIEETFVHSLPGEQRAMDEALRNLRRLAQLTTSAQRK
Ga0066669_1016319023300018482Grasslands SoilLALSLPQKTDNYSRMIQSFQAGNCDWKSLYEAALLETDVTKLPERITTARSAILDRIEESFTHSLPGEHRAMDVALTNLRRLAQLTTSRAA
Ga0193723_105010633300019879SoilLALSLPQKWDNYSRMIPSFQPDNRDWKPLYEAALSETDLTKLPERIITARSAILDRIEESFMHSLRGEHCAMDVALTNLRRLGKLTTSRTA
Ga0193735_104565723300020006SoilMIPSFQPDNRDWKPLYEAALSETDLTKLPERIITARSAILDRIEESFMHSLPGEHCATDVALTNLRRLGKLTTSRTA
Ga0193749_104460933300020010SoilLALSLPQKWDNYSRMIPSFQPDNRDWKPLYEAALSETDLTKLPERIITARSAILDRIEESFMHSLPGEHCATDVALTNLRRLGKLTTSRTA
Ga0193721_103209113300020018SoilMIQSSQSGNCDWKPLYEAARLETDVTKLPERITAARGAILDRIEESFVHSLPGEQRAIDEALHNLRSLAQLRITRSTKAKL
Ga0126371_1001944363300021560Tropical Forest SoilMAQVASNTDWKQLYQAALLETDTEKLPERITTARSAILDRIEESFTHPLPCEQRAMDEALRGLRRLAALLKHAA
Ga0126371_1022560133300021560Tropical Forest SoilMDWKQLYELLETDSDKLPERITTARSAILVRIEESFAHPLPGEHRAMDEALSDLRRLAAMATSKHAAREAVHSCA
Ga0126371_1043680123300021560Tropical Forest SoilMEYVHSNSGNWKPLYEVALLETDAGKLPERITTARNAILDRIEETLTCPLPGEHRAMDDALRNLRGLARIIEAQKAA
Ga0207663_1034035923300025916Corn, Switchgrass And Miscanthus RhizosphereMAFVGAFTPIRTGGLFHRMIQSSQRETCDWKPLYEAALGETDVAKLPNRITMARSAILDRIEESFSHSLPDEHRAMDDALRNLRRLAQSATSRAA
Ga0207700_1023448313300025928Corn, Switchgrass And Miscanthus RhizosphereMNQSSQRETCDWKPLYEAALGETDVAKLPNRITMARSAILDRIEESFSHSLPDEHRAMDDALRNLRRLAQSA
Ga0209155_106600433300026316SoilLLALSLPKGVDDYSRMIQSSQSSTCDWRPLYEAALLEADVAKLPERITVARSAILDRIEETFVHSLPGEQRAMDEALRNLRRLAQLTTTAQRK
Ga0209473_100951693300026330SoilMIQSSQSSTCDWRPLYEAALLEADVAKLPERITVARSAILDRIEETFVHSLPGEQRAMDEALRNLRRLAQLTTTAQRK
Ga0209267_113035023300026331SoilMPLVQAADWKPLYKAALLETDGSKLPQRITAARTAILDRIEESLTSPLPSEHRAMDDALRSLRRLAEVMAARNAA
Ga0209808_110849013300026523SoilDPITQSSNCDWRPLYEAALLEADVAKLPERITVARSAILDRIEETFVHSLPGEQRAMDEALRNLRRLAQLTTTAQRK
Ga0209056_1003544753300026538SoilMIQSFQSGNGDWKPLYEAALLETDLTKLPERITTARSAILDRIEESFTHSLPAEHRAMDVALTNLRRLAQSTTSRAA
Ga0209056_1007202213300026538SoilMIQSFQFGNCDWKPLYEAALLETDLTKLPERITTARGAILDRIEESFTHSLPGEHRAMDVALTNLRRLAQSTTSGAA
Ga0209156_1006270323300026547SoilLLALSLPKGVDDYSRMIHSSQSSNCDWRPLYEAALLEADVAKLPERITVARSAILDRIEETFVHSLPGEQRAMDEALRNLRRLAQLTTTAQRK
Ga0209156_1026387423300026547SoilMEDYLPMIQCSQSGNCDWMPLYEAAVFETDVTKLAERITAARGAILDRIEESFAHSLPGEQRAMDQALRNLRSLAQLTITRSA
Ga0209161_1011632223300026548SoilMMQFFQSGNGDWKPLYEAALLETDLTKLPERITTARSAILDRIEESFTHSLPAEHRAMDVALTNLRRLAQSTTSRAA
Ga0209474_1049892013300026550SoilMIHSSQSSNCDWRPLYEAALLEADVAKLPERITVARSAILDRIEETFVHSLPGEQRAMDEALRNLRRLAQLTTTAQRK
Ga0209580_1000274053300027842Surface SoilMIQSSQSGNCDWKPLYEAALLETDVTELPQRITAARSAILDTIEESFTHSLLGEHCAMDDALRNLRRLVHLTTSRAA
Ga0209580_1000761723300027842Surface SoilMIQSFQSGTCDWKPLYQAALLETDVTKLPQRITAARSAILDRIEESFTHSLLGEHRAMDEALRNLRRLALLTTSRAA
Ga0308198_104728433300030904SoilGNCDWKPLYEAALLETDLAKVPERITTARSAILDRIDESFTHSLPGEHRAMDVALTNLRRLAQLSASRAA
Ga0308190_108520733300030993SoilSFQSGNCDWKPLYEAALLETDLAKVPERITTARSAILDRIDESFTHSLPGEHRAMDVALTNLRRLAQLSASRAA
Ga0308197_1011014233300031093SoilFQSGNCDWKPLYEAALLETDLAKVPERITTARSAILDRIDESFTHSLPGEHRAMDVALTNLRRLAQLSASRAA
Ga0170824_11514810323300031231Forest SoilLLALSLLKGLDDYFPMIQSSQSGNCDWKPLYEAALLETDVTKLPERITAARSAILDRIEETFVHSLPGEQRAMDEALRNLRSLAQLTITRSA
Ga0308194_1001130833300031421SoilLLALSLPQKWDNYSKVIRSFQSGNCDWKPLYEAALLETDLAKVPERITTARSAILDRIDESFTHSLPGEHRAMDVALTNLRRLAQLSASRAA
Ga0308194_1039808413300031421SoilPDNRDWKPLYEAALSETDLTKLPERIITARSAILDRIEESFMHSLPGEHCAMDVALTNLRRLGKLTTSRTA
Ga0170820_1592733723300031446Forest SoilLALSLLKGLDDYFPMIQSSQSGNCDWKPLYEAALLETAAIKLPERITAARSAILDRIEETFVHSLPGEQRAMDEALRNLRSLAQLTITRSA
Ga0170819_1635916913300031469Forest SoilLLALSLLKGLDDYFPMIQSSQSGNCDWKPLYEAALLETAAIKLPERITAARSAILDRIEETFVHSLPGEQRAMDEALRN
Ga0310813_1002748423300031716SoilMQHFQSKGTDWIPLYEMAMLETDPGKLPQRITTARSAILDRIEESLTHPLPGEQRAMDDALRNLRRLAQISSPKSAA
Ga0310813_1237219813300031716SoilMHQNLHFHSPDWKPLYDAALLETDTSKLAERITVARSAIFDRIEESLTHPVASEHRAMDDALRNLHRLAKIMAKRSAA
Ga0306920_10400527623300032261SoilWKQLYEAALLETDSDKLRERITTARSAILVRIEESFAHPLPGEHRAMDEALSDLRRLAAMATSKHAA
Ga0310812_1018725723300032421SoilMQHFQSKGTDWIPLYEMAMLETDPGKLPQRITTARSAILDRIEESLTHPLPGEQRAMDHALRKLRRLAQISSPKSAA
Ga0310810_1047636413300033412SoilMQHFQSKGTDWIPLYEMAMLETDPGKLPQRITTARSAILDRIEESLTHPLPGEQRAMDDALRNLRRLAQISSP


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.