Metagenome / Metatranscriptome Family F043850

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F043850
Family Type	Metagenome / Metatranscriptome
Number of Sequences	155
Average Sequence Length	66 residues
Representative Sequence	PHADRPSHDSFTFQALADGHVRLALVGVREADDAVIVVTKQAATAPRLFRRYAPNVLLWTVPSDKA
Number of Associated Samples	111
Number of Associated Scaffolds	155

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.29 %
% of genes near scaffold ends (potentially truncated)	94.84 %
% of genes from short scaffolds (< 2000 bps)	92.90 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.710 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (34.839 % of family members)
Environment Ontology (ENVO)	Unclassified (58.065 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.645 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 45.45% Coil/Unstructured: 54.55%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 155 Family Scaffolds
PF03699	UPF0182	58.71
PF00118	Cpn60_TCP1	1.94
PF08681	DUF1778	1.29
PF02826	2-Hacid_dh_C	1.29
PF06525	SoxE	0.65
PF01545	Cation_efflux	0.65
PF00563	EAL	0.65
PF01553	Acyltransferase	0.65

COG ID	Name	Functional Category	% Frequency in 155 Family Scaffolds
COG1615	Uncharacterized membrane protein, UPF0182 family	Function unknown [S]	58.71
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	1.94
COG4453	Uncharacterized conserved protein, DUF1778 family	Function unknown [S]	1.29
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.65
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.65
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.65
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.65
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.65
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.65
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.71 %
Unclassified	root	N/A	1.29 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.71 %
Unclassified	root	N/A	1.29 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.71 %
Unclassified	root	N/A	1.29 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	41.29 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.29 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.29 %
Unclassified	root	N/A	1.29 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	41.29 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.29 %
Unclassified	root	N/A	1.29 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.65 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	39.35 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	1.29 %
Unclassified	root	N/A	1.29 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.65 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	39.35 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	1.29 %
Unclassified	root	N/A	1.29 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.65 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	39.35 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1.29 %
Unclassified	root	N/A	1.29 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.65 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	39.35 %
unclassified Rubrobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae	1.29 %
Unclassified	root	N/A	1.29 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.65 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	39.35 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1.29 %
Unclassified	root	N/A	1.29 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10279509	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300002243\|C687J29039_10323059	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300002558\|JGI25385J37094_10108360	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300002558\|JGI25385J37094_10138127	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300002560\|JGI25383J37093_10044624	All Organisms → cellular organisms → Bacteria	1449	Open in IMG/M
3300002560\|JGI25383J37093_10108607	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300002560\|JGI25383J37093_10198415	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	528	Open in IMG/M
3300002561\|JGI25384J37096_10111121	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300002561\|JGI25384J37096_10208031	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300002562\|JGI25382J37095_10151234	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300002908\|JGI25382J43887_10220044	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300002912\|JGI25386J43895_10147878	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	586	Open in IMG/M
3300002915\|JGI25387J43893_1035996	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300005166\|Ga0066674_10070298	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1602	Open in IMG/M
3300005166\|Ga0066674_10101369	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300005166\|Ga0066674_10321769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	727	Open in IMG/M
3300005166\|Ga0066674_10350788	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	692	Open in IMG/M
3300005166\|Ga0066674_10497488	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	549	Open in IMG/M
3300005176\|Ga0066679_10141090	All Organisms → cellular organisms → Bacteria	1501	Open in IMG/M
3300005177\|Ga0066690_11048377	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	509	Open in IMG/M
3300005178\|Ga0066688_10178064	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300005180\|Ga0066685_10681152	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300005184\|Ga0066671_10049090	All Organisms → cellular organisms → Bacteria	2121	Open in IMG/M
3300005186\|Ga0066676_10748875	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	664	Open in IMG/M
3300005186\|Ga0066676_10918518	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	586	Open in IMG/M
3300005187\|Ga0066675_10363421	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1061	Open in IMG/M
3300005447\|Ga0066689_10156566	All Organisms → cellular organisms → Bacteria	1358	Open in IMG/M
3300005447\|Ga0066689_10384231	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300005447\|Ga0066689_10490010	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300005447\|Ga0066689_10943223	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	532	Open in IMG/M
3300005552\|Ga0066701_10173137	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300005552\|Ga0066701_10182530	All Organisms → cellular organisms → Bacteria	1279	Open in IMG/M
3300005554\|Ga0066661_10489252	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300005554\|Ga0066661_10847428	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	534	Open in IMG/M
3300005558\|Ga0066698_11092802	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	504	Open in IMG/M
3300005569\|Ga0066705_10139915	All Organisms → cellular organisms → Bacteria	1477	Open in IMG/M
3300005586\|Ga0066691_10864116	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	532	Open in IMG/M
3300005598\|Ga0066706_10022236	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3882	Open in IMG/M
3300006031\|Ga0066651_10813409	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	507	Open in IMG/M
3300006794\|Ga0066658_10851855	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	519	Open in IMG/M
3300006796\|Ga0066665_10316213	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300006903\|Ga0075426_11487977	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	515	Open in IMG/M
3300006954\|Ga0079219_11026846	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300007255\|Ga0099791_10072169	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1565	Open in IMG/M
3300007265\|Ga0099794_10445536	Not Available	679	Open in IMG/M
3300009012\|Ga0066710_103953760	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	555	Open in IMG/M
3300009038\|Ga0099829_10084124	All Organisms → cellular organisms → Bacteria	2443	Open in IMG/M
3300009038\|Ga0099829_10318648	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300009038\|Ga0099829_10647560	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	878	Open in IMG/M
3300009038\|Ga0099829_10668021	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300009038\|Ga0099829_10931326	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	721	Open in IMG/M
3300009088\|Ga0099830_10325387	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1232	Open in IMG/M
3300009089\|Ga0099828_11018029	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300009089\|Ga0099828_11155801	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	687	Open in IMG/M
3300009090\|Ga0099827_10300512	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1358	Open in IMG/M
3300009090\|Ga0099827_10342136	All Organisms → cellular organisms → Bacteria	1271	Open in IMG/M
3300009090\|Ga0099827_11129496	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300009137\|Ga0066709_100656652	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1502	Open in IMG/M
3300009137\|Ga0066709_104015777	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	535	Open in IMG/M
3300009698\|Ga0116216_10895949	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300009804\|Ga0105063_1089266	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	504	Open in IMG/M
3300009806\|Ga0105081_1066252	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	557	Open in IMG/M
3300010301\|Ga0134070_10039638	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1573	Open in IMG/M
3300010301\|Ga0134070_10222631	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	698	Open in IMG/M
3300010321\|Ga0134067_10321099	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	602	Open in IMG/M
3300010322\|Ga0134084_10031785	All Organisms → cellular organisms → Bacteria	1481	Open in IMG/M
3300010323\|Ga0134086_10179165	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300010323\|Ga0134086_10193100	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	758	Open in IMG/M
3300010325\|Ga0134064_10395985	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300010329\|Ga0134111_10290308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	679	Open in IMG/M
3300010329\|Ga0134111_10395827	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	591	Open in IMG/M
3300010329\|Ga0134111_10523136	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	523	Open in IMG/M
3300010336\|Ga0134071_10271576	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300011269\|Ga0137392_10165389	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1794	Open in IMG/M
3300011271\|Ga0137393_11224997	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	637	Open in IMG/M
3300012096\|Ga0137389_11213301	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300012189\|Ga0137388_10182594	Not Available	1881	Open in IMG/M
3300012189\|Ga0137388_10561046	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300012189\|Ga0137388_11705412	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	564	Open in IMG/M
3300012198\|Ga0137364_10435114	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300012200\|Ga0137382_10892256	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300012201\|Ga0137365_10498679	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300012203\|Ga0137399_11565796	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	547	Open in IMG/M
3300012207\|Ga0137381_10892007	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300012208\|Ga0137376_10586086	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300012209\|Ga0137379_10479835	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1152	Open in IMG/M
3300012209\|Ga0137379_10784276	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300012209\|Ga0137379_11686878	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	530	Open in IMG/M
3300012349\|Ga0137387_10453597	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	930	Open in IMG/M
3300012349\|Ga0137387_10807879	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300012351\|Ga0137386_10250510	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300012357\|Ga0137384_10772474	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	778	Open in IMG/M
3300012358\|Ga0137368_10395937	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	908	Open in IMG/M
3300012362\|Ga0137361_11939259	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	505	Open in IMG/M
3300012397\|Ga0134056_1363294	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	697	Open in IMG/M
3300012399\|Ga0134061_1111447	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	606	Open in IMG/M
3300012683\|Ga0137398_10678430	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300012917\|Ga0137395_10862945	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300012917\|Ga0137395_11157587	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	544	Open in IMG/M
3300012923\|Ga0137359_10747201	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300012924\|Ga0137413_10482998	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300012925\|Ga0137419_10690536	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300012927\|Ga0137416_10845105	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300012927\|Ga0137416_10905606	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	784	Open in IMG/M
3300012930\|Ga0137407_11175313	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300012972\|Ga0134077_10275649	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300012976\|Ga0134076_10497871	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	556	Open in IMG/M
3300012977\|Ga0134087_10173279	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300015052\|Ga0137411_1111396	All Organisms → cellular organisms → Bacteria	3488	Open in IMG/M
3300015241\|Ga0137418_10518663	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300015242\|Ga0137412_10555597	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300015356\|Ga0134073_10220601	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	640	Open in IMG/M
3300015358\|Ga0134089_10207757	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300015358\|Ga0134089_10564342	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	506	Open in IMG/M
3300015359\|Ga0134085_10529394	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	541	Open in IMG/M
3300015359\|Ga0134085_10561141	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	527	Open in IMG/M
3300017654\|Ga0134069_1231286	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300018056\|Ga0184623_10195166	All Organisms → cellular organisms → Bacteria → Acidobacteria	932	Open in IMG/M
3300018431\|Ga0066655_10795997	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300018433\|Ga0066667_10993197	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300018468\|Ga0066662_10672685	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300018468\|Ga0066662_10785213	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	922	Open in IMG/M
3300018468\|Ga0066662_11467837	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300018482\|Ga0066669_12280543	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300019789\|Ga0137408_1390609	All Organisms → cellular organisms → Bacteria	2461	Open in IMG/M
3300025289\|Ga0209002_10660208	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	553	Open in IMG/M
3300026297\|Ga0209237_1075015	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1574	Open in IMG/M
3300026301\|Ga0209238_1078519	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M
3300026306\|Ga0209468_1104532	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300026307\|Ga0209469_1036457	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1617	Open in IMG/M
3300026309\|Ga0209055_1013104	All Organisms → cellular organisms → Bacteria	4243	Open in IMG/M
3300026316\|Ga0209155_1163140	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300026317\|Ga0209154_1013841	All Organisms → cellular organisms → Bacteria	3877	Open in IMG/M
3300026326\|Ga0209801_1223144	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300026327\|Ga0209266_1109326	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300026327\|Ga0209266_1157654	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300026523\|Ga0209808_1016211	All Organisms → cellular organisms → Bacteria	3736	Open in IMG/M
3300026524\|Ga0209690_1088208	All Organisms → cellular organisms → Bacteria	1293	Open in IMG/M
3300026529\|Ga0209806_1102168	All Organisms → cellular organisms → Bacteria	1219	Open in IMG/M
3300026529\|Ga0209806_1330844	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300026538\|Ga0209056_10072874	All Organisms → cellular organisms → Bacteria	2936	Open in IMG/M
3300026538\|Ga0209056_10087268	All Organisms → cellular organisms → Bacteria	2601	Open in IMG/M
3300026538\|Ga0209056_10262304	All Organisms → cellular organisms → Bacteria	1220	Open in IMG/M
3300026540\|Ga0209376_1224397	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300026547\|Ga0209156_10440426	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	539	Open in IMG/M
3300026548\|Ga0209161_10571312	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	505	Open in IMG/M
3300027655\|Ga0209388_1046316	All Organisms → cellular organisms → Bacteria	1255	Open in IMG/M
3300027748\|Ga0209689_1205664	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	857	Open in IMG/M
3300027882\|Ga0209590_10037827	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2605	Open in IMG/M
3300027882\|Ga0209590_10803145	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	598	Open in IMG/M
3300027882\|Ga0209590_10856042	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	575	Open in IMG/M
3300027903\|Ga0209488_11169193	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	520	Open in IMG/M
3300027961\|Ga0209853_1035837	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1434	Open in IMG/M
3300028536\|Ga0137415_10306424	All Organisms → cellular organisms → Bacteria	1392	Open in IMG/M
3300028536\|Ga0137415_10567604	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.35%
Host-Associated	Host-Associated	0.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.71%
Aquatic	Environmental → Aquatic	0.65%
Plants	Host-Associated → Plants	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.71%
Sediment	Environmental → Aquatic → Sediment	0.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	95.48%
Sand	Environmental → Terrestrial → Soil → Sand	1.94%
Loam	Environmental → Terrestrial → Soil → Loam	1.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	50.97%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	43.87%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.65%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.65%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.65%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	34.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	29.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	14.19%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	14.19%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.94%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.29%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300002243	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300002915	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009804	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40	Environmental	Open in IMG/M
3300009806	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_50_60	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012397	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012399	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025289	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 2	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_102795091	3300001356	Peatlands Soil	GGLVRLALVDLREADAAVKVVTTQAATAPRLFRRYAPNVLMWTVPSNTASP*
C687J29039_103230592	3300002243	Soil	FTFQAQADGQVRLALVGVREADDAVIVVTKQAATAPRLYRRYAPNVLMWTVSSNAAG*
JGI25385J37094_101083602	3300002558	Grasslands Soil	FTFQALADGHVRLALVGVREADDAVIVATKQAATAPRLFRRYAPNVLLWTVPSDKA*
JGI25385J37094_101381272	3300002558	Grasslands Soil	GAKPPAWAKPYATRPSHDSFTFQAQADGQVRLALVGVREADDAVVVVTKRAATAPRLFRRYAPNVLMWTVPXDEA*
JGI25383J37093_100446242	3300002560	Grasslands Soil	PPAWAKPYATRPSHDSFTFQAQADGQVRLALVGVREADDAVVVVTKQAATAPRLFRRYAPNVLMWTVPSAKA*
JGI25383J37093_101086072	3300002560	Grasslands Soil	ADRPSHDSFTFQALADGHVRLALVGVREADDAIVVVTKEAATAPRLFRRYAPNVLLWTVPSDKA*
JGI25383J37093_101984152	3300002560	Grasslands Soil	PAWAKPHADRPSHDSFTFQALADGHVRLALVGVREADDAVIVATKQAATAPRLFRRYAPNVLLWTVPSDKA*
JGI25384J37096_101111212	3300002561	Grasslands Soil	DRPSHDTFTFQAQADGQVRLALVGVREADDAVIAVTKQAATAPRLFRRYAPNVLMWTVSSDKA*
JGI25384J37096_102080311	3300002561	Grasslands Soil	ADRPSHDSFTFQAQTDGQVRLALVGVREADDAVIVVTKQAATAPRLFRRYAPNVLLWTVPSDKA*
JGI25382J37095_101512342	3300002562	Grasslands Soil	MTCFTFQALADGHVRLALVGVREADDAVIVATKQAATAPRLFRRYAPNVLLWTVPSDKA*
JGI25382J43887_102200444	3300002908	Grasslands Soil	GAKPPAWAKPYATRPSHDSFTFQAQADGQVRLALVGVKEADDAVLVVTKQAATAPRLFRWYAPNVLIWTMSSNAAC*
JGI25386J43895_101478781	3300002912	Grasslands Soil	PHADRPSHDSFTFQALADGHVRLALVGVREADDAIVVVTKEAATAPRLFRRYAPNVLLWTVPSDKA*
JGI25387J43893_10359961	3300002915	Grasslands Soil	ADRPSHDCFTFQVLADGHVRLALVGVREADDAVIVATKQAATAPRLFRRYAPNVLLWTVPSDKA*
Ga0066674_100702981	3300005166	Soil	IAFSGAKPPVWAKPYATRPSHDSFTFQAQTDGQVRLALVGVREADDAVIVVTKQAATTPRLFRRYAPNVLMWTVLSDDA*
Ga0066674_101013691	3300005166	Soil	PPAWAKPHADRPSHDSFTFQALADGHVRLALVGVREADDAVIVVTKQAATAPRLFRRYAPNVLMWTVSSDNA*
Ga0066674_103217691	3300005166	Soil	RPSHDSFTFQAQGDGQVRLALVGLREADDAVKVVTKQAATLPRLFRRYAPNVLMWTVPSNTASP*
Ga0066674_103507881	3300005166	Soil	IAFSGAKPPVWAKPYATRPSHDSFTFQAQTDGQVRLALVAVREADDAVVLVTKQAATAPRLFRRYAPNVLLWTV*
Ga0066674_104974882	3300005166	Soil	PPAWAKPHADRPSHDCFTFQVLADGHVRLALVGVREADDAIIVATKQAATAPRLFRRYAPNVLLWTVSSDKA*
Ga0066679_101410902	3300005176	Soil	VWAKPYATRPSHDSFTFQAQADGQVRLALVGVREAEDAVIVVTKRAATAPRLFRRYAPNVLMWTVPSDEA*
Ga0066690_110483772	3300005177	Soil	RPSHDSFTFQALADGHVRLALVGVREADDAVIVATKQAATAPRLFRRYAPNVLLWTVPSDKA*
Ga0066688_101780642	3300005178	Soil	HADRPSHDSFTFQALADGHVRLALVGVREADDAIVVVTKEAATAPRLFRRYAPNVLLWTVPSDKA*
Ga0066685_106811521	3300005180	Soil	WAKPHADRPSHDTFTFQAQADGQVRLALVGVREADDAVIVVTKQAATAPRLFRRYAPNVLMWTVSSDKA*
Ga0066671_100490901	3300005184	Soil	QTDGQVRLALVGVREADDAVIVVTKQAAAAPRLFRRYAPNVLMWTVPSDKA*
Ga0066676_107488752	3300005186	Soil	VWAKPYATRPSHDSFTFQAQTDGQVRLALVGVREADDAVIVVTKQAATTPRLFRRYAPNVLMWTVLSDDA*
Ga0066676_109185181	3300005186	Soil	IAFSGAKPPAWAKPHADRPSHDSFIFQALADGHVRLALVGVREADDAVIVVTKQSATAHRLFRRYAPNVLMWTVPSDA*
Ga0066675_103634211	3300005187	Soil	VIAFSAAKPPVWAKPYATRPSHDSFTFQVQTDGQVRLALVGVREADDAVIVVTKQAAAAPRLFRRYAPNVLMWTVPSDKA*
Ga0066689_101565661	3300005447	Soil	PSHDSFTFQAQTDGQVRLALVGVREADDAVIVVTKQAATAPRLFRRYAPNVLLWTVPSDKA*
Ga0066689_103842311	3300005447	Soil	WAKPHADRPSHDCFTFQVLADGHVRLALVGVREADDAVIVATKQAATAPRLFRRYAPNVLLWTVPSDA*
Ga0066689_104900101	3300005447	Soil	PHADRPSHDSFTFQALADGHVRLALVGVREADDAVIVVTKQAATAPRLFRRYAPNVLLWTVPSDKA*
Ga0066689_109432232	3300005447	Soil	PSHDSFTFQALADGHVRLALVGVREADDAVIVATKQAATAPRLFRRYAPNVLLWTVPSDKA*
Ga0066701_101731372	3300005552	Soil	SHDSFTFQALADGHVRLALVGVREADDAVIVVTKQAATAPRLFRRYAPNVLLWTVPSDKA
Ga0066701_101825302	3300005552	Soil	SHDSFTFQALADGHVRLALVGVREADDAVIVVTKQAATAPRLFRRYAPNVLMWTVSSDNA
Ga0066661_104892522	3300005554	Soil	RPSHDSFIFQVQTDGQVRLALVGVREADDAVIVVTKQSATAHRLFRRYAPNVLMWTVPSHA*
Ga0066661_108474281	3300005554	Soil	VQTDGQVRLALVGVREADDAVIVVTKQAAAAPRLFRRYAPNVLMWTVPSDKA*
Ga0066698_110928022	3300005558	Soil	TFQALADGHVRLALVGVREADDAVIVATKQAATAPRLFRRYAPNVLIWTVPSDKT*
Ga0066705_101399151	3300005569	Soil	PHADRPSHDSFTFQALADGHVRLALVGVREADDAVIVATKQAATAPRLFRRYAPNVLLWTVPSDKA*
Ga0066691_108641161	3300005586	Soil	RPSHDSFTFQALADGHVRLALVGVREADDAVIVATKQAATAPRLFRRYAPNVLLWTVPSDPA*
Ga0066706_100222365	3300005598	Soil	VLADGHVRLALVGVREADDAVIVVTKQAATAPRLFRRYAPNVLLWTVPSDKA*
Ga0066651_108134091	3300006031	Soil	QTDGQVRLALVGVREADDAVIVVTKQAATTPRLFRRYAPNVLMWTVLSDDA*
Ga0066658_108518552	3300006794	Soil	WAKPHADRPSHDCFTFQVLADGHVRLALVGVREADDAVIVAAKQAATAPRLFRRYAPNVLLWTVPSDKA*
Ga0066665_103162132	3300006796	Soil	DRPSHDSFTFQALADGHVRLALVGVREADDAVIVATKQAATAPRLFRRYAPNVLLWTVPSDKA*
Ga0075426_114879772	3300006903	Populus Rhizosphere	PPAWAKPYADRPSHDSFTFQAKADGQVRLALVGVREADDAVVFVTKQAATAPRLFRRYAPNVLLWTVASDEA*
Ga0079219_110268462	3300006954	Agricultural Soil	LAQGQVRLALVGVREADDAVIVVTKQAATAPRLFRRYAPNVLLWTVSSDKA*
Ga0099791_100721693	3300007255	Vadose Zone Soil	LQVIAFSGAKPPAWAKPYADRPSHDSFTFQAQAGGQVRLALVGVREADDAVIVATKQAATAPRLFRRYAPNVLLWTV*
Ga0099794_104455361	3300007265	Vadose Zone Soil	DSFTFQAQADGQVRLALVGVKEADDAVIVVTKQAATAPRLFRRYAPNVLLWTV*
Ga0066710_1039537601	3300009012	Grasslands Soil	KPPAWAKPHADRPSHDCFTFQVLADGHVRLALVGVREADDAIIVATKQAATAPRLFRRYAPNVLLWTVSSDKA
Ga0099829_100841245	3300009038	Vadose Zone Soil	VIAFSGAKPPAWAKPYATRPSHDSFTFQAQADGQVRLALVAVREADDAVLVVTKQAATAPRLFRRYAPNVLIWTVSSNAAC*
Ga0099829_103186482	3300009038	Vadose Zone Soil	QVIAFSGAKPPAWAKPHADRPSHDCFTFQVLADGHVRLALVGVREADDAVVVATKQAATAPRLFRRYAPNVLLWTVSSDKA*
Ga0099829_106475602	3300009038	Vadose Zone Soil	AKPHADRPSHDSFTFQALADGHVRLALVGVREADDAVIVVTKQAATAPRLFRRYAPNVLLWTV*
Ga0099829_106680211	3300009038	Vadose Zone Soil	QVIAFSGAKPPAWAKPYATRPSHDSFTFQAQVDGQVRLALVGVKEADDAVLVVTKAAATAPRLFRWYAPNVLMWTVSSNAAC*
Ga0099829_109313262	3300009038	Vadose Zone Soil	FSGAKPPAWAKPYATRPSHDSFTFQAQADGQVRLALVGVREADDAVVVVTKRAATAPRLFRRYAPNVLMWTVPSDEA*
Ga0099830_103253871	3300009088	Vadose Zone Soil	SFTFQALADGHVRLALVGVREADDAVIVVTKQAATAPRLFRRYAPNVLLWTV*
Ga0099828_110180292	3300009089	Vadose Zone Soil	VRPSHDSFAFQSQADGQVRLALVGVREADDAVVVVTKRAATAPRLFRRYAPNVLMWTVPSDEA*
Ga0099828_111558011	3300009089	Vadose Zone Soil	SFTFQARADGQVRLALVGVREADDAVIVVTKQATTAPRLYRRYAPNVLMWTV*
Ga0099827_103005121	3300009090	Vadose Zone Soil	TRPSHDSFTFQAQADGQVRLALVAVKEADDAVLVVTKQAATAPRLFRWYAPNVLIWTMSSNAAC*
Ga0099827_103421361	3300009090	Vadose Zone Soil	LQVIAFSGAKPPAWAKPHADRPSHDSFTFQALADGHVRLALVGVREADDAVVVATKQAATAPRLFRRYAPNVLLWTVSSDKA*
Ga0099827_111294962	3300009090	Vadose Zone Soil	PAWAKPHADRPSHDSFTFQALADGHVRLALVGVREADDAIVVVTKEAATAPRLFRRYAPNVLLWTVPSDKA*
Ga0066709_1006566521	3300009137	Grasslands Soil	IAFSGAKPPAWAKPYATRPSHDSFTFQAQGDGQVRLALVGVREADDAVIVVTKQATTAPRLFRRYAPNVLMWTVPSDKA*
Ga0066709_1040157771	3300009137	Grasslands Soil	KPPAWAKPHADRPSHDSFTFQALADGHVRLALVGVREADDAIVVVTKEAATAPRLFRRYAPNVLLWTVPSDKA*
Ga0116216_108959492	3300009698	Peatlands Soil	KPYANRPSHDSFTFQAQGGGLVRLALVDLREADAAVKVVTTQAATAPRLFRRYAPNVLMWTVPSNTASP*
Ga0105063_10892662	3300009804	Groundwater Sand	VIAFSGAKPPAWAKPHANRPSHDTFTFQAQADGQVRLALVGVREADDAVIVVTKQAATAPRLFRRYAPNVLMWTV*
Ga0105081_10662522	3300009806	Groundwater Sand	YADCPSHDSFTFQAQADGQVRLALVGVREADDAVIVVTKQAAAAPRLFRRYAPNVLIWTVSSNQD*
Ga0134070_100396381	3300010301	Grasslands Soil	VIAFSGAKPPVWAKPYATRPSHDSFTFQAQTDGQVRLALVGVREADDAVIVVTKQAATTPRLFRRYAPNVLMWTVLSDDA*
Ga0134070_102226311	3300010301	Grasslands Soil	VIAFSGAKPPVWAKPYATRPSHDSFTFQAQTDGQVRLALVAVREADDAVVLVTKQAATAPRLFRRYAPNVLLWTV*
Ga0134067_103210991	3300010321	Grasslands Soil	AKPPVWAKPYATRPSHDSFTFQAQTDGQVRLALVGVREADDAVIVVTKQAATTPRLFRRYAPNVLMWTVLSDDA*
Ga0134084_100317853	3300010322	Grasslands Soil	QTDGQVRLALVGVREADDAVIVVTKRAATTPRLFRRYAPNVLMWTVLSDDA*
Ga0134086_101791651	3300010323	Grasslands Soil	HDCFTFQVLADGHVRLALVGVREADDAIIVATKQAATAPRLFRRYAPNVLLWTVSSDKA*
Ga0134086_101931001	3300010323	Grasslands Soil	HDSFTFQAQTDGQVRLALVAVREADDAVVLVTKQAATAPRLFRRYAPNVLLWTV*
Ga0134064_103959851	3300010325	Grasslands Soil	IAFSGAKPPAWAKPHADRPSHDSFTFQALADGHVRLALVGVREADDAVIVATKQAATAPRLFRRYAPNVLLWTVPSDKA*
Ga0134111_102903081	3300010329	Grasslands Soil	NRPSHDSFTFQAQGDGQVRLALVGLREADDAVKVVTKQAATLPRLFRRYAPNVLMWTVPSNTASP*
Ga0134111_103958271	3300010329	Grasslands Soil	AFSGAKPPAWAKPHADHPSHDSFTFQALADGHVRLALVGVREADDAVIVATKQALTAPRLFRRYAPNVLLWTVPSDKA*
Ga0134111_105231361	3300010329	Grasslands Soil	PHADRPSHDCFTFQVLADGHVRLALVGVREADDAVIVATKQAATAPRLFRRYAPNVLIWTVPSDKT*
Ga0134071_102715761	3300010336	Grasslands Soil	AWAKPHADRPSHDCFTFQVLADGHVRLALVAVREADDAVIVATKQAATAPRLFRRYAPNVLLWTVPSDA*
Ga0137392_101653894	3300011269	Vadose Zone Soil	WAKPYATRPSHDSFTFQAQADGQVRLALVAVREADDAVLVVTKQAATAPRLFRRYAPNVLIWTVSSNAAR*
Ga0137393_112249972	3300011271	Vadose Zone Soil	FQALADGHVRLALVGVREADDAVIVVTKQAATAPRLFRRYAPNVLLWTV*
Ga0137389_112133011	3300012096	Vadose Zone Soil	PAWAKPHADRPSHDSFTFQAHADGQVRLALVGVREADDAVIVVTRQAATAPRLFRRYAPNVLLWTV*
Ga0137388_101825943	3300012189	Vadose Zone Soil	YADRPSHDSFTFQAQADGQVRLALVGVKEADDAVIVVTKQASTAPRLFRRYAPNVLLWTV
Ga0137388_105610461	3300012189	Vadose Zone Soil	TSPSHDSFTFQARAGGPVRLALVAVREADDPVLVVTKQAATAPRLFRWYAPNVLIWTVSSNTAC*
Ga0137388_117054121	3300012189	Vadose Zone Soil	YADRPSHDSFTFQAQADGQVRLALVGVKEADDAVIVVTKQAATAPRLFRRYAPNVLLWTV
Ga0137364_104351142	3300012198	Vadose Zone Soil	QALADGQVRLALVGVREADDAVIVVTKQAAAAPRLFRRYAPNVLMWTVPSDKA*
Ga0137382_108922562	3300012200	Vadose Zone Soil	HDCFTFQVLADGHVRLALVGVREADDAVIAATKQAATAPRLFRRYAPNVLLWTVPSDKA*
Ga0137365_104986792	3300012201	Vadose Zone Soil	AKPHADRPSHDCFTFQVLADGHVRLALVGVREADDAVIVATKQAATAPRLFRRYAPNVLLWTVPSDKA*
Ga0137399_115657962	3300012203	Vadose Zone Soil	PPAWAKPYADRPSHDSFTFQAQAGGQVRLALVGVREADDAVIVVTKQAATAPRLFRRYAPNVLLWTV*
Ga0137381_108920071	3300012207	Vadose Zone Soil	AKPPAWAKPYADRPSHDSFTFQAQADGQVRLALVGVREADDAVIVVTKQATTAPRLFRRYAPNVLMWTV*
Ga0137376_105860862	3300012208	Vadose Zone Soil	SHDCFTFQVLADGHVRLALVGVREADDAVIVATKQAATAPRLFRRYAPNVLLWTVPSDKA
Ga0137379_104798351	3300012209	Vadose Zone Soil	IAFSGAKPPAWAKPYATRPSHDSFTFQAQADGQVRLALVGVKEADDAVIVVTKEAATAPRLFRRYAPNLLMWTVPSDEA*
Ga0137379_107842762	3300012209	Vadose Zone Soil	AFSGAKPPAWAKPHADRPSHDSFTFQALADGHVRLALVGVREADDAVIVATKQAATAPRLFRRYAPNVLLWTVASDKA*
Ga0137379_116868782	3300012209	Vadose Zone Soil	AFSGAKPPAWAKPHADRPSHDTFTFQAQADGQVRLALVGVREADDAVVVVTKRAATAPRLFRRYAPNVLMWTVPSDEA*
Ga0137387_104535973	3300012349	Vadose Zone Soil	ADRPSHDCFTFQVLADGHVRLALVGVREADDAVIVVTKQAATAPRLFRRYAPNVLLWTVPSDKA*
Ga0137387_108078792	3300012349	Vadose Zone Soil	RPSHDCFTFQVLADGHVRLALVGVREADDAIIVATKQAATAPRLFRRYAPNVLLWTVSSDKA*
Ga0137386_102505101	3300012351	Vadose Zone Soil	PHADRPSHDCFTFQVLADGHVRLALVGVREADDAVIVATKQAATAPRLFRRYAPNVLLWTVPSDKT*
Ga0137384_107724742	3300012357	Vadose Zone Soil	WAKPYATRPSHDSFTFQAQTDGQVRLALVAVREADDAVVVVTKQAATAPRLFRRYAPNVLLWTV*
Ga0137368_103959373	3300012358	Vadose Zone Soil	QALADGHVRLALVGVREGDDAVIVVTKQAATAPRLFRRYAPNVLLWTVPSDRA*
Ga0137361_119392591	3300012362	Vadose Zone Soil	DGHVRLALVGVREADDAVIVATKQAATAPRLFRRYAPNVLLWTVSSDKA*
Ga0134056_13632942	3300012397	Grasslands Soil	GSFTFQAQTDGQVRLALVGVREADDAVIVVTKQAATAPRLFRRYAPNVLMWTVLSDDA*
Ga0134061_11114471	3300012399	Grasslands Soil	VIAFSVAKPPAWAKPHADRPSHDTFTFQAQADGQVRLALVGVREADDAVIVVTKQAATAPRLFRRYAPNVLMWTVSSDKA*
Ga0137398_106784301	3300012683	Vadose Zone Soil	KPHADRPSHDSFTFQALADGHVRLALVGVREADDAVIVATKQATTAPRLFRRYAPNVLLWTVPSDKA*
Ga0137395_108629451	3300012917	Vadose Zone Soil	SHDSFTFQALADGHVRLALVGVREADDAVIVATKQAATAPRLFRRYAPNVLLWTVSSDKA
Ga0137395_111575871	3300012917	Vadose Zone Soil	PAWAKPHADRPSHDSFTFQALADGHVRLALVGVREADDAVIVATKQATTAPRLFRRYAPNVLLWTVPSDKA*
Ga0137359_107472011	3300012923	Vadose Zone Soil	KPPAWAKPHADRPSHDSFTFQALADGHVRLALVGVREADDAVIVATKQAATAPRLFRRYAPNVLLWTVPSDKA*
Ga0137413_104829981	3300012924	Vadose Zone Soil	PHADRPSHDSFTFQALADGHVRLALVGVREADDAVIVATKQATTAPRLFRRYAPNVLLWTVPSDKA*
Ga0137419_106905361	3300012925	Vadose Zone Soil	KPHADRPSHDSFTFQALADGHVRLALVGVREADDAVIVAAKQSATAPRLFRRYAPNVLLWTVPSDKA*
Ga0137416_108451052	3300012927	Vadose Zone Soil	ADRPSHDSFTFQAQADGQVRLALVGVREADDAVIVVTKQAATAPRLFRRYAPNVLLWTVPSGKA*
Ga0137416_109056061	3300012927	Vadose Zone Soil	SFTFQALADGHVRLALVGVREADDAVIVAAKQSATAPRLFRRYAPNVLLWTVPSDKA*
Ga0137407_111753131	3300012930	Vadose Zone Soil	AKPPAWAKPHADRPSHDSFTFQALADGHVRLALVGVREADDAVIVATKQAATAPRLFRRYAPNVLLWTVSSDKA*
Ga0134077_102756492	3300012972	Grasslands Soil	FQVLADGHVRLALVAVREADDAVIVATKQAATAPRLFRRYAPNVLIWTVPSDKT*
Ga0134076_104978712	3300012976	Grasslands Soil	ADRPSHDTFTFQAETDGQVRLALVGVREADDAVIVVTKRAATAPRLFRRYAPNVLLWTVSSDKA*
Ga0134087_101732791	3300012977	Grasslands Soil	SFTFQAQTDGQVRLALVGVREADDAVIVVTKQAATAPRLFRRYAPNVLMWTVPSDKA*
Ga0137411_11113961	3300015052	Vadose Zone Soil	PSHDSFTFQALADGHVRLALVGVREADDAVIVAAKQSATAPRLFRRYAPNVLLWTVPSDKA*
Ga0137418_105186633	3300015241	Vadose Zone Soil	SGAKPPAWAKPHADRPSHDSFTFQALADGHVRLALVGVREADDAVIVAAKQSATAPRLFRRYAPNVLLWTVPSDKA*
Ga0137412_105555971	3300015242	Vadose Zone Soil	TFQALADGQVRLALVGVREADDAVIVATKQATTAPRLFRRYAPNVLLWTVPSDKA*
Ga0134073_102206011	3300015356	Grasslands Soil	IAFSGAKPPVWAKPYATRPSHDSFTFQVQTDGQVRLALVGVREADDAVIVVTKQAAAAPRLFRRYAPNVLMWTVPSDKA*
Ga0134089_102077571	3300015358	Grasslands Soil	HDSFTFQAQTDGQVRLALVGVREADDAVIVVTKQAATAPRLFRRYAPNVLLWTVPSDKA*
Ga0134089_105643421	3300015358	Grasslands Soil	KPPAWAKPHADRPSHDSFTFQAQADGQVRLALVAVREADDAVILVTKQAATTPRLFRRYAPNVLMWTVPSDKA*
Ga0134085_105293942	3300015359	Grasslands Soil	AKPHADRPSHDCFTFQVLADGHVRLALVGVREADDAIIVATKQAATAPRLFRRYAPNVLLWTVSSDKA*
Ga0134085_105611411	3300015359	Grasslands Soil	PHADRPSHDSFTFQALADGHVRLALVGVREADDAVIVVTKQAATAPRLFRRYAPNVLMWTVSSDNA*
Ga0134069_12312861	3300017654	Grasslands Soil	HADRPSHDSFTFQALADGHVRLALVGVREADDAVIVVTKQAATAPRLFRRYAPNVLMWTVSSDNA
Ga0184623_101951661	3300018056	Groundwater Sediment	SFTFQAQADGQVRLALVGLREADDAVIVVTKQAATATRLFRGYAPHVLLWTVSSAR
Ga0066655_107959972	3300018431	Grasslands Soil	DRPSHDSFTFQALADGHVRLALVGVREADDAVIVATKQAATAPRLFRRYAPNVLLWTVPSDKA
Ga0066667_109931972	3300018433	Grasslands Soil	AWAKPHADRPSHDSFTFQALADGHVRLALVGVREADDAVIVVTSQSATAPRLFRRYAPNVLLWTVPSDKA
Ga0066662_106726851	3300018468	Grasslands Soil	VLADGHVRLALVGVREADDAVIVVTKQAATAPRLFRRYAPNVLLWTVPSDKA
Ga0066662_107852132	3300018468	Grasslands Soil	SGAKPPAWAKPYATRPSHDSFTFQAQADGQVRLALVGVKEADDAVLVVTKQATTAPRLFRWYAPNVLIWTMSSNAAC
Ga0066662_114678371	3300018468	Grasslands Soil	FTFQALADGHVRLALVGVREADDAVIVATKQAATAPRLFRRYAPNVLIWTVPSDKT
Ga0066669_122805431	3300018482	Grasslands Soil	FQVQTDGQVRLALVGVREADDAVIVVTKQAATTPRLFRRYAPNVLMWTVLSDDA
Ga0137408_13906092	3300019789	Vadose Zone Soil	SGAKPPAWAKPHADRPSHDNFTFQAQADGHVRLALVGVREADDAVIVATKQAATAPRLFRRYAPNVLLWTVSSDKA
Ga0209002_106602081	3300025289	Soil	SGAKPPAWAKPYADRPSHDSFTFQAQADGQVRLALVGVREADDAVIVVTKQAATAPRLFRRYAPNVLMWTV
Ga0209237_10750152	3300026297	Grasslands Soil	LQVIAFSGAKPPAWAKPYATRPSHDSFTFQAQADGQVRLALVGVREADDAVVVVTKQAATAPRLFRRYAPNVLMWTVPSAKA
Ga0209238_10785191	3300026301	Grasslands Soil	HADRPSHDSFTFQALADGHVRLALVGVREADDAVIVATKQAATAPRLFRRYAPNVLLWTVPSDKA
Ga0209468_11045322	3300026306	Soil	PAWAKPHADRPSHDTFTFQAQADGQVRLALVGVREADDAVIAVTKQAATAPRLFRRYAPNVLMWTVSSDKA
Ga0209469_10364571	3300026307	Soil	LQVIAFSGAKPPVWAKPYATRPSHDSFTFQAQTDGQVRLALVGVREADDAVIVVTKQAATTPRLFRRYAPNVLMWTVLSDDA
Ga0209055_10131041	3300026309	Soil	IFQVQADGQVRLALVGVREADDAVIVVTKQSATAHRLFRRYAPNVLIWTVPSDA
Ga0209155_11631401	3300026316	Soil	FTFQALADGHVRLALVGVREADDAVIVATKQAATAPRLFRRYAPNVLLWTVPSDKA
Ga0209154_10138413	3300026317	Soil	VQTDGQVRLALVGVREADDAVIVVTKQAAAAPRLFRRYAPNVLMWTVPSDKA
Ga0209801_12231441	3300026326	Soil	FTFQAQADGQVRLALVGVREAEDAVIVVTKRAATAPRLFRRYAPNVLMWTVPSDEA
Ga0209266_11093261	3300026327	Soil	AKPPAWAKPHADRPSHDCFTFQVLADGHVRLALVGVREADDAVIVATKQAATAPRLFRRYAPNVLLWTVPSDKA
Ga0209266_11576542	3300026327	Soil	AKPPAWAKPHADRPSHDCFTFQVLADGHVRLALVGVREADDAIIVATKQAATAPRLFRRYAPNVLLWTVSSDKA
Ga0209808_10162114	3300026523	Soil	VIAFSGAKPPAWAKPHADRPSHDSFTFQALADGHVRLALVGVREADDAVIVATKQAATAPRLFRRYAPNVLLWTVPSDKA
Ga0209690_10882081	3300026524	Soil	RPSHDSFTFQALADGHVRLALVGVREADDAVIVVTKQAATAPRLFRRYAPNVLMWTVSSDNA
Ga0209806_11021682	3300026529	Soil	HADRPSHDSFTFQALADGHVRLALVGVREADDAIVVVTKEAATAPRLFRRYAPNVLLWTVPSDKA
Ga0209806_13308442	3300026529	Soil	PSHDSFIFQVQTDGQVRLALVGVREADDAVIVVTKQSATAHRLFRRYAPNVLMWTVPSDA
Ga0209056_100728741	3300026538	Soil	PHAERPSHDSFTFQALADGHVRLALVGVREADDAVIVATKQAATAPRLFRRYAPNVLIWTVPSDKT
Ga0209056_100872681	3300026538	Soil	HDTFTFQAQADGQVRLALVGVREADDAVIAVTKQAATAPRLFRRYAPNVLMWTVSSDKA
Ga0209056_102623041	3300026538	Soil	IAFSGAKPPAWAKPHADRPSHDSFTFQALADGHVRLALVGVREADDAVIVVTKQAATAPRLFRRYAPNVLMWTVSSDNA
Ga0209376_12243972	3300026540	Soil	ADRPSHDSFTFQALADGHVRLALVGVREADDAVIVATKQAATAPRLFRRYAPNVLLWTVPSDKA
Ga0209156_104404261	3300026547	Soil	PSHDSFTFQALADGHVRLALVGVREADDAVIVATKQAATAPRLFRRYAPNVLLWTVPSDK
Ga0209161_105713121	3300026548	Soil	AASPSHDSFTFQAKADGQVRLALVGVKEADDAVVFVTKQAATAPRLFRRYAPNLLLWTVPSDEA
Ga0209388_10463162	3300027655	Vadose Zone Soil	LQVIAFSGAKPPAWAKPYADRPSHDSFTFQAQAGGQVRLALVGVREADDAVIVATKQAATAPRLFRRYAPNVLLWTV
Ga0209689_12056641	3300027748	Soil	LQIIAFSGAKPPAWAKPYADRPSHDRFTFQAQADGQVQLALVGVKEADDAVIVVTKQAATAPRLFRRYAPNVLLWTV
Ga0209590_100378271	3300027882	Vadose Zone Soil	SFTFQAQADGQVRLALVGVKEADDAVIVVTKQAATAPRLFRRYAPNVLLWTV
Ga0209590_108031451	3300027882	Vadose Zone Soil	KPHADRPSHDSFTFQALADGHVRLALVGVREADDAVIVATKQAATAPRLFRRYAPNVLLWTVPSDKA
Ga0209590_108560422	3300027882	Vadose Zone Soil	PPAWAKPYATRPSHDSFTFQAQADGQVRLALVGVREADDAVVVVTKQAATAPRLFRRYAPNVLMWTVPSDEA
Ga0209488_111691931	3300027903	Vadose Zone Soil	PAWAKPHADRPSHDSFTFQALADGHVRLALVGVREADDAVIVATKQATTAPRLFRRYAPNVLLWTVPSDKA
Ga0209853_10358371	3300027961	Groundwater Sand	PSHDSFTFQAQADGQVRLALVGVREADDAVIVVTKQAATAPRLFRRYAPNVLIWTVSSNAAC
Ga0137415_103064241	3300028536	Vadose Zone Soil	SGAKPPAWAKPHADRPSHDSFTFQAQADGQVRLALVGVREADDAVIVVTKQAATAPRLFRRYAPNVLLWTVPSGKA
Ga0137415_105676041	3300028536	Vadose Zone Soil	SGAKPPAWAKPHADRPSHDSFTFQALADGHVRLALVGVREADDAVIVAAKQSATAPRLFRRYAPNVLLWTVPSDKA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F043850

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences