Metagenome / Metatranscriptome Family F044337

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F044337
Family Type	Metagenome / Metatranscriptome
Number of Sequences	154
Average Sequence Length	49 residues
Representative Sequence	AVQLPLGQRGTGVLAASSPGVAIKQDTVTMPPATFAVIETRALSPQ
Number of Associated Samples	137
Number of Associated Scaffolds	154

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.65 %
% of genes near scaffold ends (potentially truncated)	99.35 %
% of genes from short scaffolds (< 2000 bps)	92.21 %
Associated GOLD sequencing projects	132
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (72.078 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.974 % of family members)
Environment Ontology (ENVO)	Unclassified (23.377 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.156 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 14.86% Coil/Unstructured: 85.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 154 Family Scaffolds
PF00196	GerE	7.14
PF01494	FAD_binding_3	5.84
PF01168	Ala_racemase_N	2.60
PF11941	DUF3459	2.60
PF04030	ALO	1.95
PF00440	TetR_N	1.95
PF00535	Glycos_transf_2	1.30
PF00392	GntR	1.30
PF04672	Methyltransf_19	0.65
PF08450	SGL	0.65
PF00903	Glyoxalase	0.65
PF13632	Glyco_trans_2_3	0.65
PF00391	PEP-utilizers	0.65

COG ID	Name	Functional Category	% Frequency in 154 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	11.69
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	5.84
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	5.84
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	5.84
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	1.95
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.65
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.08 %
Unclassified	root	N/A	27.92 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.08 %
Unclassified	root	N/A	27.92 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.08 %
Unclassified	root	N/A	27.92 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	68.83 %
Unclassified	root	N/A	27.92 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	68.18 %
Unclassified	root	N/A	27.92 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.92 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	20.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.92 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.30 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.95 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.65 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.65 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.92 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	1.30 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.65 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.65 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.65 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.65 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.92 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	1.30 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.65 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.65 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.65 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.65 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.92 %
Nocardia cerradoensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia cerradoensis	1.30 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.65 %
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	0.65 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.65 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.65 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.92 %
Nocardia cerradoensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia cerradoensis	1.30 %
Frankia sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp.	0.65 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.65 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.65 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.65 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005327\|Ga0070658_10674746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	897	Open in IMG/M
3300005329\|Ga0070683_101755635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	596	Open in IMG/M
3300005339\|Ga0070660_100380889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1164	Open in IMG/M
3300005355\|Ga0070671_100586189	Not Available	963	Open in IMG/M
3300005434\|Ga0070709_10435189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	985	Open in IMG/M
3300005435\|Ga0070714_100702937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	975	Open in IMG/M
3300005436\|Ga0070713_101951212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	569	Open in IMG/M
3300005438\|Ga0070701_10449628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	827	Open in IMG/M
3300005587\|Ga0066654_10533984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	645	Open in IMG/M
3300005616\|Ga0068852_100498242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1212	Open in IMG/M
3300005993\|Ga0080027_10355830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	587	Open in IMG/M
3300006028\|Ga0070717_11570532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	596	Open in IMG/M
3300006854\|Ga0075425_100878529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1025	Open in IMG/M
3300007076\|Ga0075435_100146452	All Organisms → cellular organisms → Bacteria	1984	Open in IMG/M
3300009156\|Ga0111538_13211912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	569	Open in IMG/M
3300009174\|Ga0105241_11021756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	774	Open in IMG/M
3300009520\|Ga0116214_1034274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1832	Open in IMG/M
3300009553\|Ga0105249_10055753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3617	Open in IMG/M
3300009683\|Ga0116224_10103244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1381	Open in IMG/M
3300009700\|Ga0116217_10193013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp.	1342	Open in IMG/M
3300009700\|Ga0116217_10751901	Not Available	601	Open in IMG/M
3300010048\|Ga0126373_11328576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	785	Open in IMG/M
3300010343\|Ga0074044_10375213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	932	Open in IMG/M
3300010373\|Ga0134128_11835959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	667	Open in IMG/M
3300010379\|Ga0136449_101013479	Not Available	1334	Open in IMG/M
3300010396\|Ga0134126_12316360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	585	Open in IMG/M
3300012189\|Ga0137388_11965934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	514	Open in IMG/M
3300012200\|Ga0137382_10318575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1087	Open in IMG/M
3300012944\|Ga0137410_11802701	All Organisms → cellular organisms → Bacteria → Terrabacteria group	540	Open in IMG/M
3300012985\|Ga0164308_11763068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	576	Open in IMG/M
3300012988\|Ga0164306_10033418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2977	Open in IMG/M
3300013105\|Ga0157369_10520804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1230	Open in IMG/M
3300014325\|Ga0163163_12348738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	592	Open in IMG/M
3300015242\|Ga0137412_10556248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	873	Open in IMG/M
3300015374\|Ga0132255_106332093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	501	Open in IMG/M
3300016294\|Ga0182041_10306675	Not Available	1318	Open in IMG/M
3300016319\|Ga0182033_10339953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1252	Open in IMG/M
3300016341\|Ga0182035_10461277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1079	Open in IMG/M
3300016371\|Ga0182034_10406057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1119	Open in IMG/M
3300016404\|Ga0182037_10938136	Not Available	752	Open in IMG/M
3300016422\|Ga0182039_10643686	Not Available	930	Open in IMG/M
3300016445\|Ga0182038_11552411	Not Available	595	Open in IMG/M
3300017821\|Ga0187812_1043735	Not Available	1518	Open in IMG/M
3300017823\|Ga0187818_10135047	Not Available	1071	Open in IMG/M
3300017928\|Ga0187806_1300459	Not Available	566	Open in IMG/M
3300017932\|Ga0187814_10184627	Not Available	782	Open in IMG/M
3300017933\|Ga0187801_10338773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	617	Open in IMG/M
3300017942\|Ga0187808_10401949	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300017970\|Ga0187783_11072770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	580	Open in IMG/M
3300017972\|Ga0187781_10670610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	749	Open in IMG/M
3300017972\|Ga0187781_10857355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	661	Open in IMG/M
3300017973\|Ga0187780_10144762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1647	Open in IMG/M
3300017973\|Ga0187780_10324931	Not Available	1084	Open in IMG/M
3300017975\|Ga0187782_10321037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1170	Open in IMG/M
3300017975\|Ga0187782_11155657	Not Available	605	Open in IMG/M
3300018001\|Ga0187815_10019925	Not Available	2884	Open in IMG/M
3300018037\|Ga0187883_10035889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2666	Open in IMG/M
3300018046\|Ga0187851_10551358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	653	Open in IMG/M
3300018060\|Ga0187765_10855542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	611	Open in IMG/M
3300018064\|Ga0187773_10785150	Not Available	604	Open in IMG/M
3300018085\|Ga0187772_10117106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1733	Open in IMG/M
3300018482\|Ga0066669_10423908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1135	Open in IMG/M
3300020081\|Ga0206354_10039195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	840	Open in IMG/M
3300020580\|Ga0210403_11252367	Not Available	569	Open in IMG/M
3300020581\|Ga0210399_10681163	Not Available	846	Open in IMG/M
3300020582\|Ga0210395_10616900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	813	Open in IMG/M
3300020583\|Ga0210401_10280739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1525	Open in IMG/M
3300021171\|Ga0210405_10316369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1233	Open in IMG/M
3300021181\|Ga0210388_10492689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1076	Open in IMG/M
3300021181\|Ga0210388_10554256	Not Available	1007	Open in IMG/M
3300021374\|Ga0213881_10260424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	770	Open in IMG/M
3300021388\|Ga0213875_10127331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1190	Open in IMG/M
3300021401\|Ga0210393_10692087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	831	Open in IMG/M
3300021402\|Ga0210385_10314729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1162	Open in IMG/M
3300021402\|Ga0210385_10586185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	850	Open in IMG/M
3300021402\|Ga0210385_10676487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	789	Open in IMG/M
3300021432\|Ga0210384_10700748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	906	Open in IMG/M
3300021475\|Ga0210392_11148532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	582	Open in IMG/M
3300021478\|Ga0210402_10372533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1325	Open in IMG/M
3300021478\|Ga0210402_11964793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	511	Open in IMG/M
3300021479\|Ga0210410_11095802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	686	Open in IMG/M
3300022731\|Ga0224563_1026366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	529	Open in IMG/M
3300025509\|Ga0208848_1045362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	943	Open in IMG/M
3300025898\|Ga0207692_10467589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	796	Open in IMG/M
3300025899\|Ga0207642_10056017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1806	Open in IMG/M
3300025907\|Ga0207645_10255007	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300025935\|Ga0207709_11282614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	605	Open in IMG/M
3300026035\|Ga0207703_10986125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	808	Open in IMG/M
3300026088\|Ga0207641_12228583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	548	Open in IMG/M
3300026889\|Ga0207745_1027201	Not Available	501	Open in IMG/M
3300027047\|Ga0208730_1030211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	627	Open in IMG/M
3300027049\|Ga0207806_1019424	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	793	Open in IMG/M
3300027050\|Ga0209325_1045870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	529	Open in IMG/M
3300027096\|Ga0208099_1020283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	929	Open in IMG/M
3300027330\|Ga0207777_1083873	Not Available	553	Open in IMG/M
3300027725\|Ga0209178_1121282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	886	Open in IMG/M
3300027783\|Ga0209448_10002211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5965	Open in IMG/M
3300027812\|Ga0209656_10040692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2689	Open in IMG/M
3300028773\|Ga0302234_10529643	Not Available	504	Open in IMG/M
3300028806\|Ga0302221_10362296	Not Available	632	Open in IMG/M
3300028881\|Ga0307277_10056382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1608	Open in IMG/M
3300030013\|Ga0302178_10509840	Not Available	523	Open in IMG/M
3300030490\|Ga0302184_10108058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1249	Open in IMG/M
3300030494\|Ga0310037_10273315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	727	Open in IMG/M
3300030503\|Ga0311370_11046705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	904	Open in IMG/M
3300031027\|Ga0302308_10011057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6943	Open in IMG/M
3300031170\|Ga0307498_10479223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	505	Open in IMG/M
3300031236\|Ga0302324_101268948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	975	Open in IMG/M
3300031543\|Ga0318516_10032846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2749	Open in IMG/M
3300031546\|Ga0318538_10479778	Not Available	674	Open in IMG/M
3300031573\|Ga0310915_10612687	Not Available	771	Open in IMG/M
3300031715\|Ga0307476_10792113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	701	Open in IMG/M
3300031715\|Ga0307476_11069798	Not Available	593	Open in IMG/M
3300031719\|Ga0306917_10922563	Not Available	683	Open in IMG/M
3300031723\|Ga0318493_10467290	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300031724\|Ga0318500_10427790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	660	Open in IMG/M
3300031724\|Ga0318500_10584266	Not Available	565	Open in IMG/M
3300031778\|Ga0318498_10332997	Not Available	679	Open in IMG/M
3300031792\|Ga0318529_10491817	Not Available	570	Open in IMG/M
3300031792\|Ga0318529_10510270	Not Available	559	Open in IMG/M
3300031795\|Ga0318557_10173723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia cerradoensis	979	Open in IMG/M
3300031797\|Ga0318550_10659374	Not Available	502	Open in IMG/M
3300031823\|Ga0307478_11112208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	659	Open in IMG/M
3300031831\|Ga0318564_10122388	Not Available	1158	Open in IMG/M
3300031831\|Ga0318564_10184661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	929	Open in IMG/M
3300031831\|Ga0318564_10519271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	516	Open in IMG/M
3300031832\|Ga0318499_10112764	Not Available	1055	Open in IMG/M
3300031845\|Ga0318511_10062603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1520	Open in IMG/M
3300031860\|Ga0318495_10320073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	689	Open in IMG/M
3300031879\|Ga0306919_10243554	Not Available	1351	Open in IMG/M
3300031879\|Ga0306919_10257797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1314	Open in IMG/M
3300031947\|Ga0310909_10521113	Not Available	996	Open in IMG/M
3300031947\|Ga0310909_10651097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	878	Open in IMG/M
3300031954\|Ga0306926_10716889	Not Available	1212	Open in IMG/M
3300031962\|Ga0307479_10750958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	953	Open in IMG/M
3300031981\|Ga0318531_10442132	Not Available	589	Open in IMG/M
3300032039\|Ga0318559_10126396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1149	Open in IMG/M
3300032041\|Ga0318549_10429901	Not Available	595	Open in IMG/M
3300032063\|Ga0318504_10515635	Not Available	573	Open in IMG/M
3300032076\|Ga0306924_10895774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia cerradoensis	982	Open in IMG/M
3300032090\|Ga0318518_10199342	Not Available	1025	Open in IMG/M
3300032160\|Ga0311301_10413440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2057	Open in IMG/M
3300032205\|Ga0307472_101002548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	783	Open in IMG/M
3300032770\|Ga0335085_10319891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1830	Open in IMG/M
3300032770\|Ga0335085_10420923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1545	Open in IMG/M
3300032770\|Ga0335085_10783265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1051	Open in IMG/M
3300032805\|Ga0335078_10262220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2349	Open in IMG/M
3300032892\|Ga0335081_10015690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12258	Open in IMG/M
3300032893\|Ga0335069_12790335	Not Available	501	Open in IMG/M
3300032896\|Ga0335075_11571184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	543	Open in IMG/M
3300032954\|Ga0335083_10714678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	812	Open in IMG/M
3300032955\|Ga0335076_10152298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2227	Open in IMG/M
3300033158\|Ga0335077_12037205	Not Available	532	Open in IMG/M
3300034124\|Ga0370483_0071589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1117	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.31%
Host-Associated	Host-Associated	11.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.17%
Plants	Host-Associated → Plants	11.69%
Aquatic	Environmental → Aquatic	7.14%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.97%
Freshwater	Environmental → Aquatic → Freshwater	7.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.14%
Peat	Environmental → Terrestrial → Peat	4.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.25%
Roots	Host-Associated → Plants → Roots	1.30%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.60%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.94%
Loam	Environmental → Terrestrial → Soil → Loam	8.44%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.14%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.55%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.60%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.60%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.65%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.65%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	37.01%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	14.29%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.99%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.30%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.65%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.65%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.65%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.65%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.65%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.79%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.49%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.49%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.55%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.55%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.25%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.25%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.25%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.95%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.95%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.30%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.30%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.30%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.30%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.30%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.65%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.65%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.65%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.65%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.65%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.65%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.65%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022731	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU4	Environmental	Open in IMG/M
3300025509	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026889	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 57 (SPAdes)	Environmental	Open in IMG/M
3300027047	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF042 (SPAdes)	Environmental	Open in IMG/M
3300027049	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 72 (SPAdes)	Environmental	Open in IMG/M
3300027050	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027096	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043 (SPAdes)	Environmental	Open in IMG/M
3300027330	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070658_106747463	3300005327	Corn Rhizosphere	QRGTGVLAASSAGVAIKQDTVTMPPATFAVVETRAAPGPM*
Ga0070683_1017556352	3300005329	Corn Rhizosphere	KAVRLPLGQRGTGVLAASSPGVAIKRDMVTMPPSTFAVVETRAAPGPM*
Ga0070660_1003808894	3300005339	Corn Rhizosphere	VRLPLGQRGTGVLAASSAGVAIKQDMVTMPPATFAVVETRAAPGPM*
Ga0070671_1005861891	3300005355	Switchgrass Rhizosphere	NLGDQPARLALGARGTGVLAASSPGVAITHDTVTMPPAAFAVIETRASSSR*
Ga0070709_104351893	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	IAANLGDQPARLALGERGTGVLAASSPGVAITQDTVTMPPAAFAVIETRAVNPP*
Ga0070714_1007029375	3300005435	Agricultural Soil	GERGTGVLAASSPGVAITQDTVTMPPAAFAVIETRAVNPP*
Ga0070713_1019512121	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	GDQPARLALGERGTGVLAASSPGVAITQDTVTMPPAAFAVIETRAVNPP*
Ga0070701_104496283	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	LPLGQRGTGVLAASSAGVAIKQDMVTMPPATFAVVETRAAPGPM*
Ga0066654_105339843	3300005587	Soil	VRLPLGQRGTGVLAASNPGVAIKQDKVTMPPASFAVVETRALGPE*
Ga0068852_1004982421	3300005616	Corn Rhizosphere	IAANLGGKAVRLPLGQRGTGVLAASSPGVAIKQDTVTMPPSTFAVVETRAPSPM*
Ga0080027_103558302	3300005993	Prmafrost Soil	QRGTGVLAASSPGVAITQDTVTMPAASFAVIETRALNGASDLRP*
Ga0070717_115705322	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LRIAANLGGKAVRLPLGQRGTGVLAASSAGVAIKQDMVTMPPATFAVVETRAAPGPM*
Ga0075425_1008785291	3300006854	Populus Rhizosphere	VRLPLGQRGTGVLAASSPGVTIKQDMVTMPPATFAVIETRAPNPGITTTW*
Ga0075435_1001464521	3300007076	Populus Rhizosphere	AANLGGKAVRLPLGQRGTGVLAASSARVAIKQDTVTMPPATFAVVETRAAPGPM*
Ga0111538_132119122	3300009156	Populus Rhizosphere	RIAANLGGKAVRLPLGQRGTGVLAASSPGVTIKQDMVTMPPATFAVIETRASPGT*
Ga0105241_110217563	3300009174	Corn Rhizosphere	RGRLRIAANLGGKAVRLPLGQRGTGVLAASSAGVAIKQDMVTMPPATFAVVETRAAPGPM
Ga0116214_10342741	3300009520	Peatlands Soil	VVRRGRLRIAVNLGTSAARVPLGQPGMGVLAASSPGVAIHRDVVAMPPAAFAVIETRALSPLAG*
Ga0105249_100557531	3300009553	Switchgrass Rhizosphere	GKAARLPLGQRGTGVLAASSAGVAIKQDMVTMPPATFAVVETRAAPGPM*
Ga0116224_101032441	3300009683	Peatlands Soil	RLRIAVNLGTSAARVPLGQPGMGVLAASSPGVAIHRDVVAMPPAAFAVIETRGLRPLPS*
Ga0116217_101930133	3300009700	Peatlands Soil	RLRIAVNLGTSAARVPLGQPGMGVLAASSPGVAIHRDVVAMPSAAFAVIETRALSPLAG*
Ga0116217_107519012	3300009700	Peatlands Soil	AANLGTGAARLPLGQPGIGVLAASSPGVAIHRDVVELPPAAFAVIETRALHSLAS*
Ga0126373_113285761	3300010048	Tropical Forest Soil	RRGRLRIAVNLGSKAVRLPLGQRGTGVLAASSPGVSIKQSTVMMPPATFAVIETRALTSAS*
Ga0074044_103752131	3300010343	Bog Forest Soil	IAATPGTAAARPPLGQPGIGVLATPSPGVAIHRDVVAMPPATFAVIETRALSPAS*
Ga0134128_118359592	3300010373	Terrestrial Soil	RRGRLRIAANLGGKAVRLPLGQRGTGVLAASSAGVAIKQDMVTMPPATFAVVETRAAPGPM*
Ga0136449_1010134791	3300010379	Peatlands Soil	IGVLATSSPGVAIHRDVVAMPPATFAVIETRAFGPAS*
Ga0134126_123163602	3300010396	Terrestrial Soil	LAASSAGVAIKQDMVTMPPATFAVVETRAAPGPM*
Ga0137388_119659342	3300012189	Vadose Zone Soil	PLGQRGTGVLAASSPGVSIRQDTVEMPPAAFAVIETRALRPAA*
Ga0137382_103185754	3300012200	Vadose Zone Soil	GQRGTGVLAASSPGVAIKRDTVTMPPSTFAVVETRAAPGPM*
Ga0137410_118027011	3300012944	Vadose Zone Soil	TGVLASSSPGVAIKQDTVTMPPGTFAVIETRARGPAS*
Ga0164308_117630682	3300012985	Soil	AVRLPLGQRGTGVLAASSAGVAIKQDMVTMPPATFAVVETRAAPGPM*
Ga0164306_100334181	3300012988	Soil	LGGKAVRLPLGQRGTGVLAASSAGVAIKQDMVTMPPATFAVVETRAAPGPM*
Ga0157369_105208041	3300013105	Corn Rhizosphere	KAVRLPLGQRGTGVLAASSAGVAIKQDTVTMPPATFAVVETRAAPGPM*
Ga0163163_123487382	3300014325	Switchgrass Rhizosphere	WLRIAANLGGKAVRLPLGQRGTGVLAASSAGVAIKQDTVTMPPATFAVVETRAAPGPM*
Ga0137412_105562482	3300015242	Vadose Zone Soil	QRGTGVLAASSPGVAITQDTVTMPPATFAVIETRALNGVCDLRP*
Ga0132255_1063320932	3300015374	Arabidopsis Rhizosphere	LPLGQRGTGVLAASSAGVAIKQDMVTMPAATFAVVETRAAPGPM*
Ga0182041_103066751	3300016294	Soil	NLGTRTVRLPLGQPGTGVLVASSPDVAIDNDTVAVPPAAFAVIETRALRPASG
Ga0182033_103399533	3300016319	Soil	RIAANLGAGTGRLPLGQPGTGVLAASSPEVAIDKDTVAIPPGAFAVVETKALSPG
Ga0182035_104612771	3300016341	Soil	ANLGSGPVRLAIGQPGTGVLAASGPGVAIDEDTVTLPAAAFAVIETGAPGPAAGTRGA
Ga0182034_104060571	3300016371	Soil	VNLGSKTVRLPLGQRGTGVLAASSPGVAIKQSTVMMPPATFAVIETRALTSAS
Ga0182037_109381361	3300016404	Soil	LGQPGTAMLAASGPGVTIQQDTATLPPATFAVIETRVPGTQGA
Ga0182039_106436862	3300016422	Soil	RGCLRIAANLGPGTVRLPLGHPGVGVLAASSPGVAVDKDTVSVPPAAFAVIETRALHPAS
Ga0182038_115524111	3300016445	Soil	IAANLGSGPVRLALGQPGTGVLAASGPGVTIQQDTATLPPATFAVIETRVPGTQGA
Ga0187812_10437352	3300017821	Freshwater Sediment	LRIAANLGAGPVRLALGQPGTGVLATSSPGVAIQQDTVILPPAAFAVIETRGPAPGS
Ga0187818_101350473	3300017823	Freshwater Sediment	LGDQPARLALGERGTGVLAASSPGVAITQDTVTMPPAAFAVIETRALSPLAS
Ga0187806_13004591	3300017928	Freshwater Sediment	ANLGAGPVRLALGQPGTGVLAASSPGVAIQQDTVTLPPAAFAVIETRGPAPGNRGA
Ga0187814_101846271	3300017932	Freshwater Sediment	RLALGRPGIGVLAASRPEVTIEQDTVTIPAAAFAVIETRALNPAAGLASGQR
Ga0187801_103387732	3300017933	Freshwater Sediment	GMLAASSPGVAIQQDTVTVPPAAFAVIETRGPAPGNRGA
Ga0187808_104019492	3300017942	Freshwater Sediment	TGTGVLAASSPGVAIQQDTVTLPSAAFAVIETRAPGTRGA
Ga0187783_110727701	3300017970	Tropical Peatland	LGQPGIGVLAASSPQVAIEQDTVTIPPAAFTVVETRALHSVSA
Ga0187781_106706102	3300017972	Tropical Peatland	ANLGARTHRLPLGEPVVAVLAASRPGIAIGAESVTVPAAAFAVVETAA
Ga0187781_108573551	3300017972	Tropical Peatland	PLGEPGTGVLAASSPGVAITQDTVTMPPAAFAVIETKALSPAW
Ga0187780_101447621	3300017973	Tropical Peatland	TAVLAASSPGITIQQDTVALPPAAFAVIETRAPGQALGAGAGR
Ga0187780_103249313	3300017973	Tropical Peatland	VRLALGQPGTAVLAASSPGITIQQDTVALPPAAFAVIETRATGQALGAGAGR
Ga0187782_103210371	3300017975	Tropical Peatland	QPGVAVLTASGPGVAIEDESVTIPPAAFAVIETGT
Ga0187782_111556572	3300017975	Tropical Peatland	LGQPGIGVLAASSPGVAIDKDTVAIPPAAFAVIETRAVRPASG
Ga0187815_100199251	3300018001	Freshwater Sediment	LALGQPGTGVLAASSPGVAIQQDRVALPPAAFAVIETRAPRSAAG
Ga0187883_100358893	3300018037	Peatland	LPLGQPGIAVLAASSVGVAIKQDTVAIPPSSFAVIETRALRPASE
Ga0187851_105513581	3300018046	Peatland	PEAVWLPLGQPGTGVLAASSPGVAIKQDTVTIPTASFAVIETRALRPASE
Ga0187765_108555422	3300018060	Tropical Peatland	GRLRIAANLGGKAVRLQLGQRGTGVLAASSPGVAIKQEMVTMPPATFAVIETRALHPAS
Ga0187773_107851501	3300018064	Tropical Peatland	TVRLPLGQPGIGVLAASSPGVAIDKDTVTVPPAAFAVVETRALHPASG
Ga0187772_101171063	3300018085	Tropical Peatland	DVRLPLGQPGIGVLAASSPGVAIDKDTVAIPPAAFAVIETRAVRPASA
Ga0066669_104239081	3300018482	Grasslands Soil	GVLAAASQGVTIKRDMVTMPPATFAVVETRAAPGPR
Ga0206354_100391951	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	IAANLGGKAVRLPLGQRGTGVLAASSAGVAIKQDMVTMPPATFAVVETRAAPGPM
Ga0210403_112523672	3300020580	Soil	LPLGQRGIGVLAASSPGVSIKQDTVAMPPATFAVIETKALNPML
Ga0210399_106811632	3300020581	Soil	ALGQPGTGVLAASSPGVAIQQDTVNLPAAAFAVIETRAPGTREA
Ga0210395_106169003	3300020582	Soil	AANLGAEPARLALGQPGTGVLAGSSPGVTIQQDTVEIPSAAFAVIETRALRPAS
Ga0210401_102807391	3300020583	Soil	ALGQPGTGVLAASSPGVMIQQDTVTIPPAAFAVIETRALRPAS
Ga0210405_103163694	3300021171	Soil	LPLGQRGIGVLAASSPGVSIKQDTVAMPPATFAVIETKALNPVL
Ga0210388_104926891	3300021181	Soil	NIGPSTVRLPLGQPGTGVLAASSPGVAIQQDTVTMPPAAFAVIETRALSPAS
Ga0210388_105542561	3300021181	Soil	NIGPSAVRLPLGQPGTGVLAASSPGVAIQQDTVTMPPAAFAVIETRALSPAS
Ga0213881_102604242	3300021374	Exposed Rock	IVANLGGETVRLPLGQPGVGVLAASSPGVTIKQDTVTMPPAAFAVIETRALSPVS
Ga0213875_101273311	3300021388	Plant Roots	VGVLAASSPGVTIKQDTVTMPPAAFAVIETRALSPVS
Ga0210393_106920871	3300021401	Soil	TGVLAASSPGVMIQQDTVTIPPAAFAVIETRALRPAS
Ga0210385_103147294	3300021402	Soil	ARLALGQPGTGVLAASSPGVMIQQDTVTIPPAAFAVIETRALRPAS
Ga0210385_105861852	3300021402	Soil	LRIAANLGPEAVQLPLGQPGIGVLAASNPGVAIKQDTATIPAASFAVIETRALRPASE
Ga0210385_106764873	3300021402	Soil	ANLGPEPARLALGQPGTGVLAGSSPGVTIQQDTVEIPSAAFAVIETRALRPAS
Ga0210384_107007484	3300021432	Soil	TGMLAGSSPGVTIQQDTVEIPSAAFAVIETRALRPAS
Ga0210392_111485322	3300021475	Soil	ANLGGKAVRLPLGQRGTGVLAASSAGVAIKQDMVTMPPATFAVVETRAAPGPM
Ga0210402_103725332	3300021478	Soil	LGQRGTGVLAASSPGVAIKQDMVTMPPDTFAVIETRALSPQL
Ga0210402_119647933	3300021478	Soil	KAARLPLGEPGTGVLAASSPGVSVEQDTVTMPPAAFAVIETRALSPA
Ga0210410_110958023	3300021479	Soil	PGTGVLAASSPGVTIEQDTVTIPPAAFAVIETRALRPAS
Ga0224563_10263662	3300022731	Soil	NLGREPVRLALGQTGTGVLAASSPGVAIQQDTVTLPSAAFAVIETQAPGTRGA
Ga0208848_10453621	3300025509	Arctic Peat Soil	QPARLPLGQRGTGLLAASSSGVAITQDTVTMPAASFAVIETRALTPS
Ga0207692_104675893	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	GERGTGVLAASSPGVAITQDTVTMPPAAFAVIETRAVNPP
Ga0207642_100560174	3300025899	Miscanthus Rhizosphere	GKAVRLPLGQRGTGVLAASSAGVAIKQDTVTMPPATFAVVETRAAPGPM
Ga0207645_102550073	3300025907	Miscanthus Rhizosphere	LGGKAVRLPLGQRGTGVLAASSAGVAIKQDTVTMPPATFAVVETRAAPGPM
Ga0207709_112826141	3300025935	Miscanthus Rhizosphere	ANLGGKAARLPLGQRGTGVLAASSAGVAIKQDMVTMPPATFAVVETRAAPGPM
Ga0207703_109861253	3300026035	Switchgrass Rhizosphere	VRRGRLRIAANLGGKAVRLPLGQRGTGVLAASSAGVAIKQDMVTMPPATFAVVETRAAPGPM
Ga0207641_122285831	3300026088	Switchgrass Rhizosphere	GVLAASSAGVAIKQDTVTMPPATFAVVETRAAPGPM
Ga0207745_10272011	3300026889	Tropical Forest Soil	LRIAANLGTGTVRLPLGQPGIGVLAASSPDVAIDNDTVTVPPDAFAVIETRVLHPASG
Ga0208730_10302113	3300027047	Forest Soil	RIVANLGPEPARLALGQPGTGVLAASSPGVMIQQDTVTIPPAAFAVIETRALRPAS
Ga0207806_10194241	3300027049	Tropical Forest Soil	GQPVIGVLAASSPDVAIDNDTVTVPPDAFAVIETRVLHPASG
Ga0209325_10458702	3300027050	Forest Soil	RLPLGQRGTGVLAASSAGVAIKQDMVTMPPATFAVVETRAAPGPM
Ga0208099_10202831	3300027096	Forest Soil	PARLALGQPGTAVLAASGPGVAIDTDTVTIPAASFAVIETRPPGPAPGTQGA
Ga0207777_10838731	3300027330	Tropical Forest Soil	LPLGQPGIGVLAASSPDVAIDNDTVTVPPDAFAVIETRVLHPASG
Ga0209178_11212823	3300027725	Agricultural Soil	DQPARLALGERGTGVLAASSPGVAITQDTVTMPPAAFAVIETRAVNPP
Ga0209448_100022111	3300027783	Bog Forest Soil	PAPVRLALGQPGTGVLAASSAGVAIQQDTVTIPPAAFAVIETRPPGPGTPGA
Ga0209656_100406925	3300027812	Bog Forest Soil	VRLALGQTGTGVLAASSPGVAIQQDTVTLPSAAFAVIETRAPGTRGA
Ga0302234_105296432	3300028773	Palsa	ANLGPEPVRLALGQPGTGVLAACSPGVAIQQDTVTIPPAAFAVIETRAPGPGTPGTQGA
Ga0302221_103622961	3300028806	Palsa	ALGQPGTGVLAASSPGVAIQQDTVTIPPAAFAVIETRAPGPGTPGTQGA
Ga0307277_100563821	3300028881	Soil	GVLAASSPGVAIKQDKVTMPPASFAVVETRALGPE
Ga0302178_105098401	3300030013	Palsa	LGQPGTGVLAASSPGITIGQDTAIMPPATFAVLDTGEPGPAAG
Ga0302184_101080582	3300030490	Palsa	PKAVRLPLGQPGIAVLAASSPGVAINQDTVAIPPAAFAVIETRALRPASE
Ga0310037_102733151	3300030494	Peatlands Soil	QPGTGVLAASSPGVAIQQDTVTLPPAAFAVIETRGPAPGS
Ga0311370_110467052	3300030503	Palsa	ANLGRNAVWLPLGQPGIGVLAASSPGVAIKQDTVTIPPAAFAVIETRALRPASV
Ga0302308_100110579	3300031027	Palsa	GQPGIGVLAASSPGVAIKQDTVTIPPAAFAVIETRALRPASV
Ga0307498_104792231	3300031170	Soil	RLRIAANLGGKAVRLPLGQRGTGVLAASSSGVAIKQDKVTMPAASFAVVETRALGPV
Ga0302324_1012689482	3300031236	Palsa	RIAANLGRNAVWLPLGQPGIGVLAASSPGVAIKQDTVTIPPASFAVIETRALRPASV
Ga0318516_100328464	3300031543	Soil	SGPVRLELGQPGTAVLAASGPGVAIQQDTVTLPAAAFAVIETLAPGLVPGTRGA
Ga0318538_104797781	3300031546	Soil	PVRLALGQPGTGVLAASSPGVAIQQDTVTLPAAAFAVIETGAPGPAPGTRGA
Ga0310915_106126872	3300031573	Soil	GHPGVGVLAASSPGVAVDKDTVSVPPAAFAVIETRALHPASR
Ga0307476_107921133	3300031715	Hardwood Forest Soil	PLGQRGTGVLAASSPGIAIKQDTVTMPPATFAVIETRALSPQ
Ga0307476_110697981	3300031715	Hardwood Forest Soil	GSEAVELNLGQPGTGVLAASSPAVAITQDTVTIPPAAFAVIETRAPGPAPG
Ga0306917_109225631	3300031719	Soil	LGQPGTGVLVASSPDVAIDNDTVAVPPAAFAVIETRALRPASG
Ga0318493_104672901	3300031723	Soil	AANLGAAAVRLPLGQRGIGVLAASSPGVAIQQDTVTMPPAAFAVVETKALSPG
Ga0318500_104277903	3300031724	Soil	LPLGQRGTGILAASSAGVAIKQDTVTMPPATFAVIEARALSPLS
Ga0318500_105842661	3300031724	Soil	GVLAASSPGVAVDKDTVSVPPAAFAVIETRALHPASR
Ga0318498_103329971	3300031778	Soil	GPVRLALGQPGTGVLAASSPGVAIQQDTVTLPAAAFAVIETLAPGLVPGTRGA
Ga0318529_104918171	3300031792	Soil	LGSGPVRLALGQPGTGVLAASGPGVTIQQDTATLPPATFAVVETRVPGTQ
Ga0318529_105102702	3300031792	Soil	LRIAANLGTRTVRLPLGQPGTGVLVASSPDVAIDNDTVAVPPAAFAVIETRALRPASG
Ga0318557_101737231	3300031795	Soil	SGPVRLALGQPGTGVLAASSPGVAIQQDTVTLPAAAFAVIETGAPGPAPGTRGA
Ga0318550_106593742	3300031797	Soil	GSGPVRLALGQPGTAMLAASGPGVTIQQDTATLPPATFAVIETRVPGTQGA
Ga0307478_111122083	3300031823	Hardwood Forest Soil	ANLGPEPARLALGQPGTGVLAASSPGVTIQQDTVTIPPAAFAVIETRALRPAS
Ga0318564_101223883	3300031831	Soil	PGTVRLPLGHPGVGVLAASSPGVAVDKDTVSVPPAAFAVIETRALHPASR
Ga0318564_101846614	3300031831	Soil	AVRLPLGQRGTGVLAASSPGVAIKQSTVMMPPATFAVIETRALTSAS
Ga0318564_105192711	3300031831	Soil	GRLRIAANLGGKAVRLPLGQRGTGILAASSAGVAIKQDTVTMPPATFAVIEARALSPLS
Ga0318499_101127643	3300031832	Soil	PGVGVLAASSPGVAVDKDTVSVPPAAFAVIETRALHPASR
Ga0318511_100626031	3300031845	Soil	RIAVNLGSKAVRLPLGQRGTGVLAASSPGVAIKQSTVMMPPATFAVIETRALTSAS
Ga0318495_103200732	3300031860	Soil	VRLALGQPGAGVLAASGRGVAVQQDTATLPPATFAVIETRAPGTRGA
Ga0306919_102435543	3300031879	Soil	ANLGSGPVRLALGQPGTAMLAASGPGVTIQQDTATLPPATFAVVETRVPGTQ
Ga0306919_102577974	3300031879	Soil	VRLPLGQRGTGVLAASSPGVAIKQSTVMMPPATFAVIETRALTSAS
Ga0310909_105211132	3300031947	Soil	ANLGSKAVRLPLGQRGTGVLAASSSGVAIKQDTVAMPPATFAVIETRALSPQ
Ga0310909_106510971	3300031947	Soil	NLGSKAVRLPLGQRGTGVLAASSPGVAIKQSTVMMPPATFAVIETRALTSAS
Ga0306926_107168894	3300031954	Soil	LGQPGTGVLVASSPDVAIDNDTAAVPPAAFAVIETRALRPASG
Ga0307479_107509582	3300031962	Hardwood Forest Soil	RLRIAANLGGKAVRLPLGHRGTGVLAASSPGVAIKQDSVTMPPAAFAIIETRAHSPG
Ga0318531_104421321	3300031981	Soil	RIAANLGSGPVRLALGQPGTGVLAASSPGVAIQQDTVTLPAATFAVIETGAPGPAPGTRG
Ga0318559_101263962	3300032039	Soil	LGQPGAGVLAASGPGVAVQQDTATLPPATFAVIETRAPGTRGA
Ga0318549_104299011	3300032041	Soil	ANLGTRTVRLPLGQPGTGVLVASSPDVAIDNDTVAVPPAAFAVIETRALRPASG
Ga0318504_105156351	3300032063	Soil	ANLGTRPVRLELGEPGTGVLAASSPGIAIDRDTVTIPPASFAVIETGRR
Ga0306924_108957741	3300032076	Soil	LGSGPVRLALGQPGTGVLAVSSPGVAIQQDTVTLPAAAFAVIETGAPGPAPGTRGA
Ga0318518_101993422	3300032090	Soil	AANLGSRSVRLALGQPGTGVLAASGPGVTIQQDSATLPPATFAVIETRVPGTRGA
Ga0311301_104134401	3300032160	Peatlands Soil	LGQPGIGVLAASSPGVAITQDTVTIPPAAFAVIETRPLRP
Ga0307472_1010025483	3300032205	Hardwood Forest Soil	VRLPLGQRGTGVLAASSPGVTIKQDMVTMPPATFAVIETRAPSPGL
Ga0335085_103198911	3300032770	Soil	NLGPAAVRLPLGQRGIGVLAASSHGVAIQQDTVTMPPAAFAVVETKALSPG
Ga0335085_104209231	3300032770	Soil	TKAVKLPLRQPGTGVLAASHPGVAIKRDTVTMPPAAFAVVETSALSPAL
Ga0335085_107832653	3300032770	Soil	LRIAANLGGKAVRLPLGQRGTGVLAASSPGVAIKQDTVTMPPATFAVIETRALSPQLRGPQLQGP
Ga0335078_102622205	3300032805	Soil	AVQLPLGQRGTGVLAASSPGVAIKQDTVTMPPATFAVIETRALSPQ
Ga0335081_1001569013	3300032892	Soil	NLGAQAVRLPLGQRGTGVLAASSPGVAITQDTVTMPPAAFAVIETRALTPG
Ga0335069_127903351	3300032893	Soil	GRLRIAANLGASAARLPLGQRGIGVLAASSPEVAIQQDPVTMPPAAFAVVETKALSPG
Ga0335075_115711842	3300032896	Soil	AVRLPLGQRGTGVLAASSPGVAIKQDMVTMPPDTFAVIETRALSPQL
Ga0335083_107146781	3300032954	Soil	ARLPLGQRGIGMLAASSPGVAIQQDTVTMPPAAFAVIETRALHPGP
Ga0335076_101522981	3300032955	Soil	GQRGIGVLAASSPEVAIQQDTVTMPPAAFAVVETKALSPG
Ga0335077_120372051	3300033158	Soil	RLALGQPGTAVLAASSPAVAIEQDLVTLPAASFAVIETRSPGTQEA
Ga0370483_0071589_3_116	3300034124	Untreated Peat Soil	VLTASSSGVAINQDTVAVPPAAFAVIETRALRPDPEL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F044337

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences