NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F044411

Metagenome / Metatranscriptome Family F044411

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F044411
Family Type Metagenome / Metatranscriptome
Number of Sequences 154
Average Sequence Length 92 residues
Representative Sequence MPRSSNFNQIYPDQAIAICTREQAAELVQYDHHRVIVEKRAAVLLTYEWMPIEQHTGPFVLTVVFHHAEKHPPAPEKIQAIVDALRFQVRGQAR
Number of Associated Samples 117
Number of Associated Scaffolds 154

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 24.84 %
% of genes near scaffold ends (potentially truncated) 24.68 %
% of genes from short scaffolds (< 2000 bps) 79.87 %
Associated GOLD sequencing projects 106
AlphaFold2 3D model prediction Yes
3D model pTM-score0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (99.351 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil
(10.390 % of family members)
Environment Ontology (ENVO) Unclassified
(22.727 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(29.221 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 20.49%    β-sheet: 21.31%    Coil/Unstructured: 58.20%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.59
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 154 Family Scaffolds
PF01555N6_N4_Mtase 21.43
PF00484Pro_CA 9.09
PF00929RNase_T 5.19
PF02517Rce1-like 3.90
PF06803DUF1232 2.60
PF03062MBOAT 1.95
PF05977MFS_3 1.95
PF13280WYL 1.95
PF02589LUD_dom 1.95
PF05724TPMT 1.95
PF10518TAT_signal 1.95
PF00578AhpC-TSA 1.30
PF13189Cytidylate_kin2 1.30
PF13229Beta_helix 1.30
PF00037Fer4 1.30
PF08386Abhydrolase_4 1.30
PF07885Ion_trans_2 1.30
PF13561adh_short_C2 0.65
PF17170DUF5128 0.65
PF01741MscL 0.65
PF04480DUF559 0.65
PF08309LVIVD 0.65
PF08450SGL 0.65
PF01323DSBA 0.65
PF12146Hydrolase_4 0.65
PF13414TPR_11 0.65
PF03848TehB 0.65
PF13187Fer4_9 0.65
PF13673Acetyltransf_10 0.65
PF00512HisKA 0.65
PF13347MFS_2 0.65
PF02894GFO_IDH_MocA_C 0.65
PF06153CdAMP_rec 0.65

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 154 Family Scaffolds
COG0863DNA modification methylaseReplication, recombination and repair [L] 21.43
COG1041tRNA G10 N-methylase Trm11Translation, ribosomal structure and biogenesis [J] 21.43
COG2189Adenine specific DNA methylase ModReplication, recombination and repair [L] 21.43
COG0288Carbonic anhydraseInorganic ion transport and metabolism [P] 9.09
COG1266Membrane protease YdiL, CAAX protease familyPosttranslational modification, protein turnover, chaperones [O] 3.90
COG4449Predicted protease, Abi (CAAX) familyGeneral function prediction only [R] 3.90
COG3339Uncharacterized membrane protein YkvA, DUF1232 familyFunction unknown [S] 2.60
COG2814Predicted arabinose efflux permease AraJ, MFS familyCarbohydrate transport and metabolism [G] 1.95
COG0673Predicted dehydrogenaseGeneral function prediction only [R] 0.65
COG1970Large-conductance mechanosensitive channelCell wall/membrane/envelope biogenesis [M] 0.65
COG3386Sugar lactone lactonase YvrECarbohydrate transport and metabolism [G] 0.65
COG3391DNA-binding beta-propeller fold protein YncEGeneral function prediction only [R] 0.65
COG5276Uncharacterized secreted protein, contains LVIVD repeats, choice-of-anchor domainFunction unknown [S] 0.65

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.35 %
UnclassifiedrootN/A0.65 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2001200001|2001203928All Organisms → cellular organisms → Bacteria1728Open in IMG/M
3300000956|JGI10216J12902_103977076All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi554Open in IMG/M
3300003541|JGI20214J51650_10049777All Organisms → cellular organisms → Bacteria2778Open in IMG/M
3300003997|Ga0055466_10183317All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi611Open in IMG/M
3300004480|Ga0062592_100715152All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi874Open in IMG/M
3300005093|Ga0062594_100627009All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi950Open in IMG/M
3300005280|Ga0065696_1060119All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi505Open in IMG/M
3300005336|Ga0070680_101613508All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi562Open in IMG/M
3300005345|Ga0070692_10878971All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300005347|Ga0070668_101130664All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi708Open in IMG/M
3300005365|Ga0070688_100943518All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi683Open in IMG/M
3300005440|Ga0070705_100057330All Organisms → cellular organisms → Bacteria2298Open in IMG/M
3300005440|Ga0070705_100946709All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi696Open in IMG/M
3300005471|Ga0070698_100727198All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi935Open in IMG/M
3300005471|Ga0070698_101791972All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi567Open in IMG/M
3300005518|Ga0070699_100121267All Organisms → cellular organisms → Bacteria2299Open in IMG/M
3300005518|Ga0070699_100706186All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi921Open in IMG/M
3300005518|Ga0070699_100909611All Organisms → cellular organisms → Bacteria806Open in IMG/M
3300005546|Ga0070696_100565844All Organisms → cellular organisms → Bacteria913Open in IMG/M
3300005549|Ga0070704_101339474All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi656Open in IMG/M
3300005549|Ga0070704_101381921All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi646Open in IMG/M
3300005617|Ga0068859_100963033All Organisms → cellular organisms → Bacteria936Open in IMG/M
3300005719|Ga0068861_100650500All Organisms → cellular organisms → Bacteria974Open in IMG/M
3300005829|Ga0074479_10139905All Organisms → cellular organisms → Bacteria2587Open in IMG/M
3300005833|Ga0074472_10960527All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi664Open in IMG/M
3300005982|Ga0075156_10013463All Organisms → cellular organisms → Bacteria4815Open in IMG/M
3300006755|Ga0079222_10240122All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1129Open in IMG/M
3300006844|Ga0075428_100344846All Organisms → cellular organisms → Bacteria1599Open in IMG/M
3300006845|Ga0075421_100471560All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1496Open in IMG/M
3300006846|Ga0075430_100954646All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi706Open in IMG/M
3300006847|Ga0075431_101790761All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi570Open in IMG/M
3300006876|Ga0079217_10006625All Organisms → cellular organisms → Bacteria3514Open in IMG/M
3300006880|Ga0075429_100698197All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi889Open in IMG/M
3300006894|Ga0079215_10001099All Organisms → cellular organisms → Bacteria6818Open in IMG/M
3300006918|Ga0079216_11365579All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi584Open in IMG/M
3300006918|Ga0079216_11571165All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi555Open in IMG/M
3300006969|Ga0075419_10338594All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1021Open in IMG/M
3300007004|Ga0079218_10747010All Organisms → cellular organisms → Bacteria928Open in IMG/M
3300007004|Ga0079218_11458213All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium737Open in IMG/M
3300007004|Ga0079218_12005424All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi661Open in IMG/M
3300007004|Ga0079218_12551152All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi606Open in IMG/M
3300007004|Ga0079218_13603422All Organisms → cellular organisms → Bacteria → Proteobacteria526Open in IMG/M
3300007004|Ga0079218_13684341All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi521Open in IMG/M
3300007521|Ga0105044_10125137All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2794Open in IMG/M
3300009032|Ga0105048_10000432All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi63777Open in IMG/M
3300009093|Ga0105240_12447841All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi540Open in IMG/M
3300009146|Ga0105091_10059401All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1710Open in IMG/M
3300009147|Ga0114129_10000572All Organisms → cellular organisms → Bacteria45345Open in IMG/M
3300009147|Ga0114129_10342945All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1981Open in IMG/M
3300009148|Ga0105243_10330479All Organisms → cellular organisms → Bacteria1392Open in IMG/M
3300009157|Ga0105092_10010726All Organisms → cellular organisms → Bacteria4807Open in IMG/M
3300009157|Ga0105092_10716557All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi583Open in IMG/M
3300009166|Ga0105100_10236255All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1092Open in IMG/M
3300009167|Ga0113563_10517694All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1304Open in IMG/M
3300009168|Ga0105104_10001009All Organisms → cellular organisms → Bacteria21725Open in IMG/M
3300009179|Ga0115028_11784642All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi534Open in IMG/M
3300009448|Ga0114940_10022933All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2698Open in IMG/M
3300009553|Ga0105249_12172832All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300009789|Ga0126307_10200963All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1599Open in IMG/M
3300009789|Ga0126307_10341983All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1205Open in IMG/M
3300010037|Ga0126304_10571021All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium761Open in IMG/M
3300010038|Ga0126315_10001398All Organisms → cellular organisms → Bacteria9417Open in IMG/M
3300010039|Ga0126309_10059564All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1855Open in IMG/M
3300010039|Ga0126309_10246190All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1011Open in IMG/M
3300010040|Ga0126308_11051346All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi572Open in IMG/M
3300010041|Ga0126312_10087174All Organisms → cellular organisms → Bacteria2122Open in IMG/M
3300010041|Ga0126312_10370273All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1017Open in IMG/M
3300010041|Ga0126312_10499860All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium870Open in IMG/M
3300010041|Ga0126312_11055214All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi596Open in IMG/M
3300010041|Ga0126312_11418538All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi515Open in IMG/M
3300010044|Ga0126310_10411046All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi966Open in IMG/M
3300010045|Ga0126311_11224264All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300010045|Ga0126311_11798028All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi519Open in IMG/M
3300010166|Ga0126306_10221255All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1436Open in IMG/M
3300010399|Ga0134127_10139114All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2188Open in IMG/M
3300010399|Ga0134127_10830120All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi975Open in IMG/M
3300010400|Ga0134122_12556868All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi560Open in IMG/M
3300010403|Ga0134123_13022791All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi539Open in IMG/M
3300012044|Ga0136636_10124814All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1204Open in IMG/M
3300012675|Ga0137337_1053330All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi635Open in IMG/M
3300012676|Ga0137341_1081341All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi536Open in IMG/M
3300014322|Ga0075355_1234653All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi524Open in IMG/M
3300014326|Ga0157380_10995964All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium871Open in IMG/M
3300015250|Ga0180072_1090232All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi541Open in IMG/M
3300015253|Ga0180081_1018036All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1045Open in IMG/M
3300015254|Ga0180089_1073512All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi696Open in IMG/M
3300018028|Ga0184608_10106396All Organisms → cellular organisms → Bacteria1176Open in IMG/M
3300018052|Ga0184638_1032302All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium1889Open in IMG/M
3300018052|Ga0184638_1279826All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi567Open in IMG/M
3300018053|Ga0184626_10035620All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2060Open in IMG/M
3300018059|Ga0184615_10134624All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1395Open in IMG/M
3300018059|Ga0184615_10201931All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1118Open in IMG/M
3300018063|Ga0184637_10001321All Organisms → cellular organisms → Bacteria16941Open in IMG/M
3300018063|Ga0184637_10072762All Organisms → cellular organisms → Bacteria2106Open in IMG/M
3300018072|Ga0184635_10180489All Organisms → cellular organisms → Bacteria843Open in IMG/M
3300018075|Ga0184632_10406575All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi571Open in IMG/M
3300018076|Ga0184609_10357517All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi681Open in IMG/M
3300018078|Ga0184612_10541507All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi561Open in IMG/M
3300018079|Ga0184627_10015940All Organisms → cellular organisms → Bacteria3624Open in IMG/M
3300018079|Ga0184627_10252747All Organisms → cellular organisms → Bacteria928Open in IMG/M
3300018469|Ga0190270_10602338All Organisms → cellular organisms → Bacteria1071Open in IMG/M
3300018476|Ga0190274_11611990All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi742Open in IMG/M
3300019377|Ga0190264_10033080All Organisms → cellular organisms → Bacteria1905Open in IMG/M
3300020003|Ga0193739_1122723All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi644Open in IMG/M
3300020213|Ga0163152_10029569All Organisms → cellular organisms → Bacteria4448Open in IMG/M
3300021090|Ga0210377_10039660All Organisms → cellular organisms → Bacteria3313Open in IMG/M
3300021090|Ga0210377_10086920All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2104Open in IMG/M
3300021090|Ga0210377_10175543All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1381Open in IMG/M
3300021090|Ga0210377_10216374All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1213Open in IMG/M
3300021090|Ga0210377_10378723All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi846Open in IMG/M
3300021090|Ga0210377_10789374All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi514Open in IMG/M
3300021972|Ga0193737_1041024All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi665Open in IMG/M
3300024430|Ga0196962_10003769All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi4786Open in IMG/M
3300025324|Ga0209640_10673434All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi827Open in IMG/M
3300025917|Ga0207660_11452069All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi555Open in IMG/M
3300025935|Ga0207709_10022819All Organisms → cellular organisms → Bacteria3554Open in IMG/M
3300025935|Ga0207709_11182806All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi630Open in IMG/M
3300025961|Ga0207712_10493342All Organisms → cellular organisms → Bacteria1046Open in IMG/M
3300026116|Ga0207674_10914711All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi845Open in IMG/M
3300026118|Ga0207675_100128088All Organisms → cellular organisms → Bacteria2406Open in IMG/M
3300027691|Ga0209485_1011763All Organisms → cellular organisms → Bacteria1876Open in IMG/M
3300027722|Ga0209819_10007717All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi3446Open in IMG/M
3300027743|Ga0209593_10079842All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1222Open in IMG/M
3300027878|Ga0209181_10000938All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi52473Open in IMG/M
3300027886|Ga0209486_10228441All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1066Open in IMG/M
3300027886|Ga0209486_10686274All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi659Open in IMG/M
3300027909|Ga0209382_10221419All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2160Open in IMG/M
3300027909|Ga0209382_11307182All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi734Open in IMG/M
3300028380|Ga0268265_10897267All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi870Open in IMG/M
3300028380|Ga0268265_10923198All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi858Open in IMG/M
3300028674|Ga0302161_10077519All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi821Open in IMG/M
3300028769|Ga0302213_1060138All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1104Open in IMG/M
3300028772|Ga0302209_10034146All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1548Open in IMG/M
3300029890|Ga0246099_100005All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi515733Open in IMG/M
3300029989|Ga0311365_10827711All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi801Open in IMG/M
3300029998|Ga0302271_10183154All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi942Open in IMG/M
3300030002|Ga0311350_11808532All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi539Open in IMG/M
3300030005|Ga0302174_10145326All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi641Open in IMG/M
3300030055|Ga0302173_10114603All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1065Open in IMG/M
3300031092|Ga0308204_10243917All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi579Open in IMG/M
3300031232|Ga0302323_103215478All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi520Open in IMG/M
3300031726|Ga0302321_100666072All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1165Open in IMG/M
3300031731|Ga0307405_10359622All Organisms → cellular organisms → Bacteria1126Open in IMG/M
3300031824|Ga0307413_10108231All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1855Open in IMG/M
3300031824|Ga0307413_11311459All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi634Open in IMG/M
3300031902|Ga0302322_102038207All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi705Open in IMG/M
3300031911|Ga0307412_10145863All Organisms → cellular organisms → Bacteria1740Open in IMG/M
3300032002|Ga0307416_100601478All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1179Open in IMG/M
3300032002|Ga0307416_101639898All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi748Open in IMG/M
3300032004|Ga0307414_10532633All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1044Open in IMG/M
3300032126|Ga0307415_100119069All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1976Open in IMG/M
3300032126|Ga0307415_100458321All Organisms → cellular organisms → Bacteria1104Open in IMG/M
3300033521|Ga0316616_104008664All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi554Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil10.39%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment9.09%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil9.09%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.14%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen6.49%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.49%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere5.84%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment4.55%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment3.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.90%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil3.25%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.25%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.60%
FreshwaterEnvironmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater1.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.95%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.95%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater1.30%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)1.30%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.30%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.30%
Wastewater EffluentEngineered → Wastewater → Nutrient Removal → Unclassified → Unclassified → Wastewater Effluent1.30%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland0.65%
Freshwater Microbial MatEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat0.65%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.65%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand0.65%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.65%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland0.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.65%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.65%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.65%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.65%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.65%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil0.65%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog0.65%
Switchgrass Rhizosphere Bulk SoilHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere Bulk Soil0.65%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.65%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.65%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.65%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.65%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2001200001Soil microbial communities from Waseca County, Minnesota, USA - Sample 10150EnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300003541Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 BulkEnvironmentalOpen in IMG/M
3300003997Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005280Switchgrass rhizosphere microbial community from Michigan, USA - East Lansing bulk soilHost-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005829Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBCEnvironmentalOpen in IMG/M
3300005833Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBKEnvironmentalOpen in IMG/M
3300005982Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 8/11/14 A brown DNAEngineeredOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300007521Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01EnvironmentalOpen in IMG/M
3300009032Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-05EnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009146Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009157Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009166Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015EnvironmentalOpen in IMG/M
3300009167Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)EnvironmentalOpen in IMG/M
3300009168Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009179Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1EnvironmentalOpen in IMG/M
3300009448Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Cold Creek SourceEnvironmentalOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012044Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ852 (21.06)EnvironmentalOpen in IMG/M
3300012675Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT333_2EnvironmentalOpen in IMG/M
3300012676Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT433_2EnvironmentalOpen in IMG/M
3300014322Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D1EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015250Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT293B_16_10DEnvironmentalOpen in IMG/M
3300015253Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT590_16_10DEnvironmentalOpen in IMG/M
3300015254Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT860_16_10DEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018052Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2EnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300018059Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coexEnvironmentalOpen in IMG/M
3300018063Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2EnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018079Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1EnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300020003Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2EnvironmentalOpen in IMG/M
3300020213Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP8.IB-2EnvironmentalOpen in IMG/M
3300021090Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redoEnvironmentalOpen in IMG/M
3300021972Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m2EnvironmentalOpen in IMG/M
3300024430Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20EnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027691Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027722Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027743Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027776Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 8/11/14 A brown DNA (SPAdes)EngineeredOpen in IMG/M
3300027878Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-05 (SPAdes)EnvironmentalOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028674Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_1EnvironmentalOpen in IMG/M
3300028769Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_1EnvironmentalOpen in IMG/M
3300028772Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_1EnvironmentalOpen in IMG/M
3300029890Groundwater microbial communities from Horonobe Underground Research Laboratory (URL), Japan - horonobe_ig2157EnvironmentalOpen in IMG/M
3300029989III_Fen_N1 coassemblyEnvironmentalOpen in IMG/M
3300029998Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N1_1EnvironmentalOpen in IMG/M
3300030002II_Fen_N1 coassemblyEnvironmentalOpen in IMG/M
3300030005Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N3_2EnvironmentalOpen in IMG/M
3300030055Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N3_1EnvironmentalOpen in IMG/M
3300031092Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031232Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3EnvironmentalOpen in IMG/M
3300031726Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1EnvironmentalOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031824Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2Host-AssociatedOpen in IMG/M
3300031902Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2EnvironmentalOpen in IMG/M
3300031911Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1Host-AssociatedOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032004Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3Host-AssociatedOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300033521Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_BEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
20012169172001200001SoilMSRSSHFNRINPDQSVAICTREQAEKLVNYDHHIVKVNGRAGVMLTYEWMPLEEHQGPFLLTVVFHHIMGHPSVPEEIQSLVGGLSFRVRGQPR
JGI10216J12902_10397707613300000956SoilMSRSSNFNQIYPDQAIAICTREQAAELVQYDHHRVLVEKRAAVLLTYEWMPMEQHTGPFVLTVVFHHAEKHPPAPEKIQTLVDALRFQVRGQAR*
JGI20214J51650_1004977733300003541WetlandMRRSFNQVHPDQAVAICTRQQAEKLVDYDHHMVRVDGKAGVMLTHEWLPLEEHSGPFVLTVVFHYAEKHPPAPGKIQAVVDGLSFQVRGQPR*
Ga0055466_1018331723300003997Natural And Restored WetlandsAICTREQAEQIVHFDHHVVDVKGRKGVMLTYGWMPVEQHPGPFLLTVVFHSVAGHPNAPDEIQHIVSGLSFRVRGQPR*
Ga0062592_10071515223300004480SoilMILVRESENSFMSRPSNFNQIYPDQAIAICTREQAAQLVQYDHHRVIVEKRAAVLLTYEWMPIEQHVGPFVLTVVFHQAEKYPPAPEEIQTIVDALSFRMRGQAR*
Ga0062594_10062700923300005093SoilMPRSSNFNQIYPDQAIAICTREQAAELVQYDHHRVIIESRAGVLLTHEWMPIEQHTGPFVLTVVFHHAEKHPPAPEEIQTIVDALSFRMRGQAR*
Ga0065696_106011913300005280Switchgrass Rhizosphere Bulk SoilMSRPSNFNQIYPDQAIAICTREQAAELVLYDHHRVIVEKRAAVLLTDEWIPIEQHSAPFVLTVVFHHAEKHPPAPEKIQTIVDALSFRMRGQAR*
Ga0070680_10161350823300005336Corn RhizosphereMSRPSNFNQIYPDQAIAICTREQAAELVQYDHHRVIVEKRAAVLLTDEWMPIEQHSAPFVLTVVFHHAEKHPPAPEKIQAIVDALRFRVRGQAR*
Ga0070692_1087897123300005345Corn, Switchgrass And Miscanthus RhizosphereMPRSSNFNQIYPDQAIAICTREQAAELVQYDHHRVIVEKRAAVLLTYEWMSIEQHTGPFVLTVVFHHAEKHPPAPEKIQAIVDALRFQVRGQAR*
Ga0070668_10113066423300005347Switchgrass RhizosphereMPRSSNFNQIYPDQAIAICTREQAAELVQYDHHRVIIESRAGVLLTHEWMPIEQHTGPFVLTVVFHHAEQHPPAPEKIQA
Ga0070688_10094351813300005365Switchgrass RhizosphereDQAVAICTREQAEQLVHFDHHVVDVNGRKGVMLTYEWMPVEEHLGPFLLTVVFHSVAGHPPAPDEIQQIVSGLSFRVRGQPR*
Ga0070705_10005733023300005440Corn, Switchgrass And Miscanthus RhizosphereMQAICLANFNQIYPNQAIAICTREQAEQLANYDRHLVNVNGRARVMLTYEWTLLEEHTGPFALTVVFRYAEKHPPAPEKIQTIVDGLRFQVRGQAR*
Ga0070705_10094670923300005440Corn, Switchgrass And Miscanthus RhizosphereMPRSSNFNQIYPDQAIAICTREQAAELVQYDHHRVIIESRAGVLLTHEWMPIEQHTGPFVLTVVFHHAEKHPPAPEKIQAIVDVLRFQVRGQAR*
Ga0070698_10072719813300005471Corn, Switchgrass And Miscanthus RhizosphereMSKSINQIHPNQAVAICTRAQAEQLVDYDHYVVEVNGRAGVMLTHREVWMPVAEHTGPFILTVIFHNAEKHPRAPEAIQSIVDELQFQVRGQPR*
Ga0070698_10179197223300005471Corn, Switchgrass And Miscanthus RhizosphereMPRSSNFNQIYPDQAIAICTREQAAELVQYDHHRVIIESRAGVLLTHEWMPIEQHTGPFVLTVVFHHAEKHPPAPEKIQAIVDALRFQVRGQAR*
Ga0070699_10012126733300005518Corn, Switchgrass And Miscanthus RhizosphereMSRSSNFNQIHPDQAIAICTREQATALVQYDRHRVMVEKRAAVLLTYEWMPMEQHTGPFVLTVVFHHAEKHPLAPEKIQAIVDALRFQIRGQAR*
Ga0070699_10070618623300005518Corn, Switchgrass And Miscanthus RhizosphereMSRPSNFNQIYPDQAIAICTREQAAQLVQYDHHRVIVEKRAAVLLTYEWMPIEQHVGPFMLTVVFHHAEKHPPAPEEIQTIVDALSFRMRGQAR*
Ga0070699_10090961123300005518Corn, Switchgrass And Miscanthus RhizosphereMSRSSNFNQIYPDQAIAICTREQAAELVQYDHHRVIVEKRAAVLLTYEWMPIEQHTGPFVLTVVFHHTEKHPPAPEKIQVVVDALRFQVRGQAR*
Ga0070696_10056584423300005546Corn, Switchgrass And Miscanthus RhizosphereVRESENSFMSRPSNFNQIYPDQAIAICTREQAAELVQYDHHRVIVEKRAAVLITYEWMPIEQHTGPFVLTVVFHHAEKHPPAPEKIQDIVDALRFQIRGQAR*
Ga0070704_10133947413300005549Corn, Switchgrass And Miscanthus RhizosphereCTREQAAELVQYAHHRVIVEKRAAVLLTYEWMPIEQHTGPFVLTVVFHHAEKHPPAPEKIQAIVDALRFQVRGQAR*
Ga0070704_10138192113300005549Corn, Switchgrass And Miscanthus RhizosphereMQAICLANFNQIYPNQAIAICTREQADQLANYDRHLVNVNGRARVMLTYEWTLLEEHTGPFALTVVFRYAEKHPPAPEKIQTIVDGLRFQVRGQAR*
Ga0068859_10096303323300005617Switchgrass RhizosphereMSRSSNFNRINPDQAVAICTRKQAQQLVHFDHHVVDVDGRKGVMLTSEWRPMDEHEGPFLLTVVFHYVAGHPNVPDEIQAIVNGLSFRVRGQPR*
Ga0068861_10065050023300005719Switchgrass RhizosphereMSRSSNFNQIYPDQAIAICTREQAAELVQYDHHRVIVEKRAAVLHTYEWMPIEQHTGPFVLTVVFHHAEKHPPAPEKIQAMVDALRFQVRGQAR*
Ga0074479_1013990533300005829Sediment (Intertidal)MPQTSNFNQINPDQAIAICTREQADQLVNYDHQRVNVSGRPGILLTHEWSPIEEHVGPFVLTVVFHHAEALPLAPDEIQALVNKLKFQVRGQPR*
Ga0074472_1096052713300005833Sediment (Intertidal)MSKAFNQIYPNQAIAICTREQAAELADYDHHVVHVNGRQGVLLTHEWMPVEEHAGPFVLTIVFHHAEKHPEAPGTIQAIVDGL
Ga0075156_1001346333300005982Wastewater EffluentMSRPSTFNHQAVAICSREQAEQLANYDHQRVNVLGEAGVLLTSEWMPLEKHAGPFLLTVVFHYAQSHPPAPAEIQAIVDRLKFQVRGQPR*
Ga0079222_1024012233300006755Agricultural SoilMPKPFNQIHPNQAIAVCTREQAAQLVSYDHHVIRVNGRPGVLLTYGWMPIEEHAGPFVLTVVFLHAEKHPDAPEAIQSIVDGLNF
Ga0075428_10034484623300006844Populus RhizosphereMSKAINQIHPNQAVAICTRAQAEQLVDYDHYVVEVNGHAGVMLTYREVWMPVAEHTGPFILTVIFHNAEKHPRAPEAIQSIVDELQFQVRGQPR*
Ga0075421_10047156023300006845Populus RhizosphereLSSEELKMPRPSNFNRIPPNQAVAICTREQAEQLVHYDHHMVHVHGQLGVMLTDDWIPLEEHAGPFVLTVVFHHAQKHPGAPETVQAIVDGLRFQVRGQPR*
Ga0075430_10095464623300006846Populus RhizosphereMPRPSNFNRIPPNQAVAICTREQAEQLVNYDHYVVHVHGQLGVMLTDDWIPLEEHAGPFVLTVVFHHAQKHPGAPETVQAIVDGLRFQVRGQPR*
Ga0075431_10179076113300006847Populus RhizosphereMRKSINPINPNQAVAICTRDQAQQLVHYDHHVVQVNRRPGVMLTEEWMPVEEHAGPFLLTVVFHHAARHPRAPEAIQSIVDKLNFQVRGQPR*
Ga0079217_1000662543300006876Agricultural SoilMSRPSNFNQIYPDQAIAICTREQAAELVQYDHQRVIVEKRAAVLLTYEWMPIEQHTGPFVLTVVFHHAEKHPPAPEKVQAIVDVLRFQVRGQAR*
Ga0075429_10069819713300006880Populus RhizosphereMPRPSNFNRIPPNQAVAICTREQAEQLVHYDHHMVHVHGQLGVMLTDDWIPLEEHAGPFVLTVVFHHAQKHPGAPETVQAIVD
Ga0079215_1000109953300006894Agricultural SoilMSRPSNFNQIYPDQAIAICTREQAEELVQYDHQRVIVEKRAAVLLTYEWMPIEQHTGPFVLTVVFQHAEKHPPAPEKVQAIVDVLRFQVRGQAR*
Ga0079216_1136557913300006918Agricultural SoilMSRPFNQIYPSQAVAICTREQAEQLVSYDHHVVTANGRLGVMLTYEWMPVEEHAGPFVLTVVFHHAEKHPRAPEEIQAIVGGLMFQVRGQPR*
Ga0079216_1157116513300006918Agricultural SoilMPRSSNFNQIYPDQAIAICTREQAAELVQYDHHRVIVEKRAAVLLTYEWMSIEQHTGPFVLTVVFHHAEEHPPAPEKIQTIVDALKF
Ga0075419_1033859423300006969Populus RhizosphereMPTFNRIYPNQAVAICTREQAEQLVNYDHHVILVDGRPGVMLIYREAWMPVAEHADPFVLTVVFHHVEKHPRAPEAIQAVVDELKFQIRGQPR*
Ga0079218_1074701023300007004Agricultural SoilMPRSSNFNQIYPDQAIAICTHEQAAELVQYDHHRVLVEKRAAVLLTYEWMPIEQHTGPFVLTVVFHHAEKHPPAPEKIQTIVDTLKFQVRGQAR*
Ga0079218_1145821323300007004Agricultural SoilMPRPFNQIYPNQAVAICTREQAEQLVDYDHHVIRVEGRAGVMLTYPWMPIQEQSGPFVLTVVFHHAEKHPRAPEAVQSIVEELKFQIRGQPR*
Ga0079218_1200542423300007004Agricultural SoilMSRSSNFNQIYPDQAIAICIREQAAELVQYDRHRVTVEKRAAVLLTYEWMPIEQHTGPFVLTVVFRHTEKHPPAPEKIQALVDTLRFQMRGQAR*
Ga0079218_1255115213300007004Agricultural SoilIYPDQAIAICTREQAAELVQYDHQRVIIEKRAAVLLTYEWMPIEQHTGPFVLTVVFHYAEKHPPAPEKIQTIVDALRFQVRGQAR*
Ga0079218_1360342223300007004Agricultural SoilMSRSSNFNQIYPDQAIAICTREQAAELVQYDHHRVIVEKRAAVLLTYEWMPIEQHTGPFVLTVVFHHAEKHPPAPEKIQTIVDALKFQVRGQAR*
Ga0079218_1368434123300007004Agricultural SoilQVLMSRPSNFNQIYPDQAIAICTREQAAELVQYDHQRVIVEKRAAVLLTYEWMPIEQHTGPFVLTVVFHHAEKHPPAPEKVQAIVDVLRFQVRGQAR*
Ga0105044_1012513723300007521FreshwaterMSRPSNFNQIHPNQAIAICTQAQAARLINYDHHRITVLEQAGVLLTYEWMPIEEHVGPFVLTVVFHHAESHPPAPDEIQNLVNTLKFQVRGQPR*
Ga0105048_10000432593300009032FreshwaterMPRTSSFNQIASSQAVAICSREQAAQLVHYDHHRVNAAGRVAVLLTDEWLPLENHIGPFVLTIVFHHTEAHPPAPAEIQAVVDRLKFQVRGQPR*
Ga0105240_1244784123300009093Corn RhizosphereAICTREQAEELANHDHHVVHVNGRAGVMLTYEWTTLEEHTGPFVLTVVFRYAEKHPPAPEKIQTIVDGLRFQVRGQAR*
Ga0105091_1005940123300009146Freshwater SedimentMSRPSNFNQIHPNQAIAICTREQAEQLVNYDHHVVNVNGRLGVMLTHEWMPVEEHAGPFVLTVVFHHAEKHPRAPEEIQSIVDKLNFQVRGQPR*
Ga0114129_10000572363300009147Populus RhizosphereMRKSINPINPNQAVAICTRDQAQQLVHYDHHVVQVNRRPGVMLTEEWMPVEEHAGPFLLTVVFHHAERHPRAPEAIQSIVDKLNFQVRGQPR*
Ga0114129_1034294523300009147Populus RhizosphereMRKSINQINPNQAVAICTREQAEQLARYDHHVVHVDGRRGVMLTYEWMPVEEHTGPFILTVVFHHAEKHRPAPEAVQSIVNGLNFQVRGQPR*
Ga0105243_1033047923300009148Miscanthus RhizosphereMPRSSNFNQIYPDQAIAICTREQAAELVQYDHHRVIIESRAGVLLTHEWMPIEQHTGPFVLTVVFHHAEKHPPAPEKIQAIVDALRIQVRGQAR*
Ga0105092_1001072633300009157Freshwater SedimentMTKPFNQIYPNQAIAICNREQAEQLVNYDHHMVNVNGRPGVMLTYEWMPVEEHAGPFVLTVVFQHAEKHPRAPEEIQSIVDGVKFQVRGQPR*
Ga0105092_1071655723300009157Freshwater SedimentMSRPSNFNQIHPNQAIAICTREQAEQLVNYHHHVVNVNGRLGAMLTHEWMPVEEHAGPFVLTVVFHHAEKHPRAPEEIHSIVDKLNFQVRGQPR*
Ga0105100_1023625523300009166Freshwater SedimentMSKSFNQVYPHQATAVCTRAQAEQLVEYDHHVVDVNGRAGVMLTYREAWMPVEEHEGPFVLTVVFHHAGQHPRAPQAIQSIVDELMFQVRGQPR*
Ga0113563_1051769423300009167Freshwater WetlandsMSRPTNFNQIYPDQATAICAQAQAEQLMNYDHHCVTIMGKTGVLLTHEWMPIEKHVGPFVLTVVFHHAQAHPPAPDEIQGLVNNLKFQVRGQPR*
Ga0105104_10001009203300009168Freshwater SedimentMTKPFNQIYPNQAIAICNREQAEQLVNYDHHMVNVNGRPGVMLTYEWMPVEEHAGPFVLTVVFQHTEKHPRAPEEIQSIVDGVKFQVRGQPR*
Ga0115028_1178464223300009179WetlandMRRSFNQVYPDQAVAICTRQQAEQLVNYDHHVVQVDGRAGVMLTYEWMPLEEHTGPFLLTVVFHYVEKHPTALEEIQAIVDGLRFQIRGQPR*
Ga0114940_1002293323300009448GroundwaterMTRSSSFNQIQPDKAIAICTREQAEQLVNYDHHQVTISERIGILLTAEWQPLESHVGPFILTVVFHNVQEYPPAPESIQAIVDSLKFQIRGQAR*
Ga0105249_1217283223300009553Switchgrass RhizosphereMPRSSNFNQIYPDQAIAICTREQAAELVQYDHHRVIVEKRAAVLLTYEWMPIEQHTGPFVLTVVFHHAEKHPPAPEKIQAIVDALRFQVRGQAR*
Ga0126307_1020096333300009789Serpentine SoilMPRLFNQIHPNQAIAVCTPEQAAQLVSYDHHMVQVNGRPGVLLTYGWMPIEEHAGPFVLTVVFHHAEKHPGAPEAIQSIVDGLNFQVRGQPR*
Ga0126307_1034198313300009789Serpentine SoilMSRPSNFNQIHPNQAVAICPREQTEQLAPYDHHVVNVNGHPGVMLTYEWMPVEEHTGPFILTVVFHHAEKHPRPPEAVQSI
Ga0126304_1057102123300010037Serpentine SoilQAVAICTREQAQQLVIYDHHVVHVNDRPGVMLMYEWLPVEEHVGPFVLTVVFQHAEKHSAAPEAIQSLVDGLNFQVRGQPR*
Ga0126315_1000139853300010038Serpentine SoilMSRPSNFNQIYADQAIAICTREQAEQLVNYDHHVIRVNGRAGVMLTYEWMPLEEHTGPYVLTVVFRHAEKHPPAPEKIQAIVDGLRFQVRGQAR*
Ga0126309_1005956423300010039Serpentine SoilMPAKPFNQIYPNQAIAICTREQAEVLVKYDHHTVRVSSRLGVMLTYEWIPIEEHTGPFVLTVVFHYAEKHPPAPEAIQSIVDKLRFQVRGQPR*
Ga0126309_1024619023300010039Serpentine SoilMSRSSNFNQIYPDQAIAICTRDQAAELVRYDHQRVIVEKRAAVLLTYEWMPIEQYTDPFVLIVVFHHAEKHPPAPEKIQAIVDTLRFQ
Ga0126308_1105134613300010040Serpentine SoilMPSKPFNQIYPSQAIAICTREQAEMLVNYDHHTVRVNGRLGVMLTYEWLPVEEHSSPFVLTVVFHHADKHPPAPEAIQSIVEELSFQVRGQPR*
Ga0126312_1008717423300010041Serpentine SoilMSRPSHFNRINPDQSVAICTREQAEKLVNYDNHVVKVNGRAGVMLTTEWMPMEEHQGPFLLTVVFHHILGHLSASEEIQALVSELSFRVRGRPR*
Ga0126312_1037027323300010041Serpentine SoilMPTFNQVHPNQAVALCTREQAAQLVNYDHHVVRVHGRPGVMLTSERISIEEHAGPFVLTVVFHHVEKHPRAPEAIQSVVDELRFQVRGQPR*
Ga0126312_1049986013300010041Serpentine SoilMSSSFNQIYPNQAVAICTREQAQQLVIYDHHVVKVNGRPGVMLMYEWLPVEEHVGPFVLTVVFQHAEKHSAVPEAIQSLVDGLNFQVRGQPR*
Ga0126312_1105521423300010041Serpentine SoilCTREQAEQLVNYDHHVVHVNGQLGVMLTAEWIPVEEHAGPFVLTVVFHHAQKDPGVPETVQAIVDGLRFQFRGQPR*
Ga0126312_1141853813300010041Serpentine SoilMSGPSNFNQIYADQAIAICTREQAEQLVNYDHHVIRVNGRAGVMLTYEWMPLEEHTGPYVLTVVFRHTDKHPPTPEKIQSIIDGLRFQVRGQAR*
Ga0126310_1041104623300010044Serpentine SoilMSRPPHFNRINPDQSVAICTREQAEKLVNYDHHVVKVNGRAGVMLTSEWLPLEEHHGPFLLTVVFHHILGHPSAPEEIQAMVSELSFRVRGQPR*
Ga0126311_1122426413300010045Serpentine SoilEQAGQLVNFDHHVVDVNGRKAVMITYEWMPLEEHLGPFLLTVVCHSVTGHPNAPEQIQEIVSGLSFQVRGQPR*
Ga0126311_1179802823300010045Serpentine SoilIAICTREQAEVLVKYDYHTVRVSSRLGVMLTYEWIPIEEHTGPFVLTVVFHYAEKHPPAPEAIQSIVDKLRFQVRGQPR*
Ga0126306_1022125513300010166Serpentine SoilQIYPDQAIAICSREQAAELVQYDHHRVLVEKRAAVLLTYEWMPIEQHIGPFVLTVVFHHAEKHPHAPENIQAIVDALRFQVRGQAR*
Ga0134127_1013911433300010399Terrestrial SoilMPRSSNFNQIYPDQAIAICTREQAAELVQYAHHRVIVEKRAAVLLTYEWMPIEQHTGPFVLTVVFHHAEKHPPAPEKIQAIVDALRFQVRGQAR*
Ga0134127_1083012023300010399Terrestrial SoilMSRPSNFNQIYPDQAIAICTREQAAELVQYDHHRVIVEKRAAVLLTDEWMPIEQHSAPFVLTVVFHHAEKHPPAPEKIQTIVDALSFRMRGQAR*
Ga0134122_1255686813300010400Terrestrial SoilHALMSRSSNFNQIYSDQAIAICTREQAAELVQYDHHRVMVEKRAAVLLTYEWMPIEQHTGPFVLTVVFHHAEKHPPASEKIQAIVDALRFRMRGQAR*
Ga0134123_1302279123300010403Terrestrial SoilMPRSSNFNQIYPDQAIAICTREQAAELVQYDHHRVIVEKRAAVLPTYEWMPIEQHTGPFVLTVVFHHAEKHPPAHEKIQAIVDALRIQVRVQAREEDL*
Ga0136636_1012481413300012044Polar Desert SandMSRPSNFNQIHPNQAIAICTQAQAARLINYDHHRVTVLEQAGVLLTYEWMPIEEHVGPFVLTVVFHHAESHPPAPDEIQNLVNTLKFQVRGQPR*
Ga0137337_105333013300012675SoilMPRPLNFNQINPDQAIAICTRQQAEQLVDYDHHRVTVLGKAGVLLTYEWMPIEEHVGPFVLTVVFHHAETHPPAPDDIQTLVKGLRFRVRGQPR*
Ga0137341_108134113300012676SoilINPNQATAICTRAQAEQLINYDHHRVTVLGKSGVLLTYEWMPIEEHIGPFVLTVIFHHAEMHPPAPDEIQAIVNGLKFQARGQPR*
Ga0075355_123465313300014322Natural And Restored WetlandsMRRSFNQVHPDQAVAICTRQQAEKLVDYDHHMVRVDGKAGVMLTHEWLPLEEHSGPFVLTVVFHYAEKHPPAPGEIQAVVDGLSFQVRGQPR*
Ga0157380_1099596413300014326Switchgrass RhizosphereMSRPSNFNQIYPDQAIAICTREQAAELVQYDHHRVIVEKRAAVLLTDECLPIEQHTGPFVLTVVFHHAEKHPPAPEKIQALVDALRLQLRGQA
Ga0180072_109023213300015250SoilMSRPPNFNQIHPNQATAICTRVQAEQLANYDHHRVDVLGQAGVLLTYEWMPIEEHIGPFVLTVVFHHTETHPPAPDEIQILVNGLKFQVRGQPR*
Ga0180081_101803623300015253SoilMSRPSNFNQIYPDQAVAICTCEQAAQIVDYDHHVVSVDGQTGVMLTYEWLPLEEHTGPFVLTVVFHHAEKHPHASGKIQSIVDGLGFQVRGQAR*
Ga0180089_107351213300015254SoilMPRPSNFNQINPDQAIAVCTRQQAQQLVNYDHHRVHVLEHVGVLLTYEWMPIEEHVGPFVLTVVFHHAEAHPPAPDEIQDIVSRLRFQVRGQPR*
Ga0184608_1010639623300018028Groundwater SedimentMSRSSNFNQIYPDQAIAICTREQAAELVQYDHHRVIVEKRAAVLITHEWKPIEQHTGPFVLTVVFHHAEKHPPAPEKIQAIVDALRFQVRVQAR
Ga0184638_103230233300018052Groundwater SedimentMSRSSNFNQIYPDQAVAICTSEQAEELVQFDHHRVNIGNRPGVILTHEWMPLDEHTGPFVLTVVFHYAEKHPPAPAAPENIQSIVDGLRFQV
Ga0184638_127982613300018052Groundwater SedimentMPRPATFNQIYPNQATAICTRRQAEQLADYDHQRVTVSGRVAVLLTSEWLPLEEHIGPFILTVVFHHAEIHSPAPTEIQAVVDQLKFQVRGQAR
Ga0184626_1003562023300018053Groundwater SedimentMSRPSNFNQIYPDQAIAICTREQATELVQYDHHRIMVEKRAAVLLTYEWMPIEQHTGPFVLTVVFHHAEKHPPAPEKIQAIVDELRFQVRGQAR
Ga0184615_1013462433300018059Groundwater SedimentMSRPSNFNRINPDQAVAICTREQAGQLVHYDHHVVNVNGRMGVMLTYEWMPIEAHQGPFLLTVVFHHTAGHPSAPEEIQSLVGELSFRVRGQPR
Ga0184615_1020193123300018059Groundwater SedimentPDQAIAICTRQQAEQLVDYDHHRATVLGRAGVLLTYEWMPIEEHVGPFVLTVVFHHADAHPPAPDEIQALVSRLRFQVRGQPR
Ga0184637_1000132193300018063Groundwater SedimentMSRPSNFNQIYSDQAIAICTREQATELVQYDHHRIMVEKRAAVLLTYEWMHIEQHTGPFVLTVVFHHAEKHPPAPEKIQAIVDELRFQVRGQAR
Ga0184637_1007276243300018063Groundwater SedimentMSRPSNFNQIYPDQAIAICTREQAAELVQYDHHRVIVEKRAAVLLTYKWMPIEEHMGPFVLTVVFHHAEKHPPAPEKIQAIVDELRFQLRGQAR
Ga0184635_1018048923300018072Groundwater SedimentMSRSSNFNQIYPDQAIAICTREQAAELVQYDHHRVNVEKRAAVLLTYEWMPIEQHKGPFVLTVVFHHAEKHPPAPEKIQAIVDALRFQVRGQAR
Ga0184632_1040657523300018075Groundwater SedimentMSRSSNFNQIYPDQAIAICTREQAAELVQYDHHRVNVEKRAAVLLTYEWMPIEQHTGPFVLTVVFHHAEKHPPAPEKIQAIVDELRFQVRGQA
Ga0184609_1035751723300018076Groundwater SedimentMSRSSNFNQIYPDQAIAICTREQAAELVQYDHHRVIVEKRAAVLLTHEWMPIEQHTGPFVLTVVFHHAEKHPPAPEKIQAIVDALRFQVRGQAR
Ga0184612_1054150723300018078Groundwater SedimentMSRSSNFNQIHPDQAIAICTREQAAELVQYDHHRVIVEKRAAVLLTYEWMPIEQHTGPFVLTVVFHHAEKHPPAPEKIQAMVDALRFQIRGQAR
Ga0184627_1001594023300018079Groundwater SedimentMSRPSNFNQIYSDQAIAICTREQATELVQYDHHRIMVEKRAAVLLTYEWMPIEQHTGPFVLTVVFHHAEKHPPAPEKIQAIVDELRFQVRGQAR
Ga0184627_1025274723300018079Groundwater SedimentMSRPSNFNQIYPDQAIAICTREQAADLVQYDHHRVIVEKRAAVLLTYKWMPIEEHMGPFVLTVVFHHAEKHPPAPEKIQAIVDELRFQLRGQAR
Ga0190270_1060233823300018469SoilMSRPSNFNQIYPDQAIAICTREQAAELVQYDHQRVIVEKRAAVLLTYEWMPIEQHTGPFVLTVVFHHAEKHPPAPEKVQAIVDVLRFQVRGQAR
Ga0190274_1161199023300018476SoilMSKSINQIHPNQAVAICTRAQAEQLVNYDHYVVEVNGHAGVMLTHREAWMPVAEHTGPFILTVSFHHAEQHPRAPEAIQSIVDELQFQVRGQPR
Ga0190264_1003308033300019377SoilMSRPSNFNQIYPDQAIAICTREQAAELVQYDHHRVIVEKRAAVLLTSEWMPIEQYTGPFVLTVVFHHAEKHPLAPEKVQAIVDVLRFQVRGQAR
Ga0193739_112272323300020003SoilMSRSSNFNQIYPDQAVAICTREQAAQLVDYDHHRVNIENRPGVLLTYEWMPLEEHTGPFVLTVVFHHAEKHPPAPESIQSIVDELRFQIRGQAR
Ga0163152_1002956943300020213Freshwater Microbial MatMSRPSNFNQIHPNQAIAICTQAQAARLINYDHHRITVLEQAGVLLTYEWMPIEEHVGPFVLTVVFHHAESHPPAPDEIQNLVNTLKFQVRGQPR
Ga0210377_1003966023300021090Groundwater SedimentMPAFDQTHPNHATAVCTREQAETLVNYDHHVVHVHGCPGVMLTYREAWMPVEEHSGPFVLTVVFQHAEKHPRAPEAAQSVVDEPRFRVRGQPR
Ga0210377_1008692023300021090Groundwater SedimentMPRPSNFNQVNPDQAIAVCTRQQAEQLADYGHHRVTVLGKAGVLLTYEWMPIEEHVGPFVLTVVFHHADAHPPAPDEIQVLVSTLRFQVRGQPR
Ga0210377_1017554313300021090Groundwater SedimentMPRLFDFNQINPDQAIAICTRQEAEQLVDYDHHRVTVLGKAGALLTYEWMPIEEHVGPFVLTVVFHRADAYPPAPDEIQALVTRLRFQVRGQPR
Ga0210377_1021637433300021090Groundwater SedimentVIAIWEFRKLLMSRPSNFNQIYPDRATAICTREQAEQLVNYDHYVVNVHGRAGVMLTHEWLPLEEHTGPFVLTVVFHHAEKHPHAPGKIQPIVDRLGFQVRGQAR
Ga0210377_1037872323300021090Groundwater SedimentMPRPSDFNQINPDQAIAICTRQQAEQLVDYDHHRVTVLGRAGVLLTYEWMPIEEHVGPFVLTVVFHHADAHPPAPDEIQALVSRLRFQVRGQPR
Ga0210377_1078937413300021090Groundwater SedimentMSRPPNFNQIHPNQATAICTRAQAEQLINYDHHCVTVLGNASVLLTYEWMPIEEHVGPFVLTVVFHHAEAHPPAPDD
Ga0193737_104102413300021972SoilMLRPSNFNQIYPDRAIALCTREQAQQLADYDHHVVSVHSRAGVMLTYEWMPLEEHTGPFVLTVVFHHADKHPPAPEKIQSILDGLRFQVRGQAR
Ga0196962_1000376933300024430SoilMPKPFNQIYPNQAIAICTREQAEQLVDYDHHVIQVDGRAGVMLTYEWMPVEEHSGPFVLTVVFHHAEKHPRAPQAVQSIMEELKFQIRGQPR
Ga0209640_1067343423300025324SoilMSRSSNFNQIYPDQAIAICTREQAEQLANYDHRVVNVNGRPGVMLTSEWMPLEEHRGPSVLTVVFHHAEKHPPAPAKIQSIMDGLSFQVRGQPR
Ga0207660_1145206923300025917Corn RhizosphereMSRPSNFNQIYPDQAIAICTREQAAELVQYDHHRVIVEKRAAVLLTDEWMPIEQHSAPFVLTVVFHHAEKHPPAPEKIQAIVDALRFRVRGQAR
Ga0207709_1002281953300025935Miscanthus RhizosphereMQAICLANFNQIYPNQAIAICTREQAEQLANYDRHLVNVNGRARVMLTYEWTLLEEHTGPFALTVVFRYAEKHPPAPEKIQTIVDGLRFQVRGQAR
Ga0207709_1118280623300025935Miscanthus RhizosphereMPRSSNFNQIYPDQAIAICTREQAAELVQYDHHRVIIESRAGVLLTHEWMPIEQHTGPFVLTVVFHHAEKHPPAPEKIQAIVDALRFQVRGQAR
Ga0207712_1049334223300025961Switchgrass RhizosphereMPRSSNFNQIYPDQAIAICTREQAAELVQYDHHRVIVEKRAAVLLTYEWMPIEQHTGPFVLTVVFHHAEKHPPAPEKIQAIVDALRFQVRGQAR
Ga0207674_1091471123300026116Corn RhizosphereMPRSSNFNQIYPDQAIAICTREQAAELVQYDHHRVTVEKRAAVLLTYEWMPIEQHTGPFVLTVVFHHAEKHPPAPEKIQTIVDALRFQVRGQAR
Ga0207675_10012808823300026118Switchgrass RhizosphereMSRSSNFNQIYPDQAIAICTREQAAELVQYDHHRVIVEKRAAVLHTYEWMPIEQHTGPFVLTVVFHHAEKHPPAPEKIQAMVDALRFQVRGQAR
Ga0209485_101176333300027691Agricultural SoilMSRPSNFNQIYPDQAIAICTREQAAELVQYNHQRVIVEKRAAVLLTYEWMPIEQHTGPFVLTVVFHHAEKHPPAPEKVQAIVDVLRFQVRGQAR
Ga0209819_1000771733300027722Freshwater SedimentMTKPFNQIYPNQAIAICNREQAEQLVNYDHHMVNVNGRPGVMLTHEWMPVEEHAGPFVLTVVFQHAEKHPRAPEEIQSIVDGVKFQVRGQPR
Ga0209593_1007984223300027743Freshwater SedimentMTKPFNQIYPNQAIAICNREQAEQLVNYDHHMVNVNGRPGVMLTYEWMPVEEHAGPFVLTVVFQHTEKHPRAPEEIQSIVDGVKFQVRGQPR
Ga0209277_1003654713300027776Wastewater EffluentKILAKVILTKNIMSRPSTFNHQAVAICSREQAEQLANYDHQRVNVLGEAGVLLTSEWMPLEKHAGPFLLTVVFHYAQSHPPAPAEIQAIVDRLKFQVRGQPR
Ga0209181_10000938303300027878FreshwaterMPRTSSFNQIASSQAVAICSREQAAQLVHYDHHRVNAAGRVAVLLTDEWLPLENHIGPFVLTIVFHHTEAHPPAPAEIQAVVDRLKFQVRGQPR
Ga0209486_1022844113300027886Agricultural SoilPSNFNQIYPDQAIAICTRKQAAELVQYDHQRVIVEKRAAVLLTYEWMPIEQHTGPFVLTVVFHHAEKHPPAPEKVQAIVDVLRFQVRGQAR
Ga0209486_1068627423300027886Agricultural SoilMPRSSNFNQIYPDQAIAICTHEQAAELVQYDHHRVLVEKRAAVLLTYEWMPIEQHTGPFVLTVVFHHAEKHPPAPEKIQTIVDALKFQVRGQAR
Ga0209382_1022141943300027909Populus RhizosphereMRKSINPINPNQAVAICTRDQAQQLVHYDHHVVQVNRRPGVMLTEEWMPVEEHAGPFLLTVVFHHAARHPRAPEAIQ
Ga0209382_1130718223300027909Populus RhizosphereTRLSSEELKMPRPSNFNRIHPNQAVAICTREQAEQLVHYDHHMVHVHGQLGVMLTDDWIPLEEHAGPFVLTVVFHHAQKHPGAPETVQAIVDGLRFQVRGQPR
Ga0268265_1089726723300028380Switchgrass RhizosphereDLMSRSSNFNQIYPDQAIAICTREQAAELVQYDHHRVIVEKRAAVLLTYEWMSIEQHTGPFVLTVVFHHAEKHPPAPEKIQAIVDALRFQVRGQAR
Ga0268265_1092319823300028380Switchgrass RhizosphereMSRPSNFNQIYPDQAIAICTREQAAELVLYDHHRVIVEKRAAVLLTDEWIPIEQHSAPFVLTVVFHHAEKHPPAPEKIQTIVDALSFRMRGQAR
Ga0302161_1007751913300028674FenMSRPPLFNQINPDQAIAICTPEQAQQLVDFDNQRVLVSERAGLLLTSAWLPIEKHIGPFVLTVVFHHTETHLTVPDEIQALVNKLKFQVRGQPR
Ga0302213_106013823300028769FenMSRPPLFNQINPDQAIAICTLEQAQQLVDFDNQRVLVSERAGLLLTSAWLPIEKHIGPFVLTVVFHHTETHPSVPDEIQTLVNKLKFQVRGQPR
Ga0302209_1003414623300028772FenMSRPPLFNQINPDQAIAICTLEQAQQLVDFDNQRVLVSERAGLLLTSAWLPIEKHVGPFVLTVVFHHTETHPSVPDEIQALVNKLKFQVRGQPR
Ga0246099_1000051053300029890GroundwaterMQTSPGFNQVYPGQAIAICSRAQAAQLVDYDHHTVRIQGRLGVLLTYPWLPLDENPGPFVLTVVFHHAEKHPAAPEAVQTLVDGLKFQFRGQAR
Ga0311365_1082771123300029989FenMSRPPLFNQINPDQAIAICTLEQAQQLVDFDNQRVLVSERAGLLLTSAWLPIEKHVGPFVLTVVFHHTETHPTVPDEIQALVNKLKFQVRGQPR
Ga0302271_1018315413300029998BogMSRPPLFNQINPDQAIAICTLEQAQQLVDFDNQRVLVSERAGLLLTSAWLPIEKHIGPFVLTVVFHHTETHPSVPDEIQAL
Ga0311350_1180853223300030002FenMDHPLSFNQISPSQTTAICTRAQAEQLISYDHHRVTVLGKECVLLIHEWTPIKDHIGPFILTGVFHRAESYPPAPDEIQILINVLKFKIRGQPR
Ga0302174_1014532623300030005FenQAIAICTLEQAQQLVDFDNQRVLVSERAGLLLTSAWLPIEKHVGPFVLTVVFHHTETHPTVPDEIQALVNKLKFQVRGQPR
Ga0302173_1011460323300030055FenMSRPPLFNQINPDQAIAICTLEQAQQLVDFDNQRVLVSERAGLLLTSAWLPIEKHIGPFVLTVVFHHTETHPSVPDEIQALVNKLKFQVRGQPR
Ga0308204_1024391723300031092SoilRSSNFNQIYPDQAIAICTREQAEQLANYDHHVIHVNGRVGIMLTYEWLPLEEHTGPFVLTVVFRYAEKHPSAPEKIQSIVDGLRFQVRGQAR
Ga0302323_10321547823300031232FenKMSRPPLFNQINPDQAIAICTLEQAQQLVDFDNQRVLVSERAGLLLTSAWLPIEKHIGPFVLTVVFHHTETHPSVPDEIQALVNKLKFQVRGQPR
Ga0302321_10066607223300031726FenMSRPALFNQINPDQAIAICTLEQAQQLIDFDSQRVLVSDRAGLLLTSTWQPIEKHVGPFVLTVVFHHAETHPSVPDEIQALVNTLKFQVRGQPR
Ga0307405_1035962223300031731RhizosphereMSRPSNFNQIYPDQAIAICTREQAAELVQYDHQRVIVEKRAAVLLTYEWMPIEQHTGPFVLTVVFHHAEKHPPAPEKVQAIVDALRFQVRGQAR
Ga0307413_1010823123300031824RhizosphereMSTSFNQVYPHRGIAICTREQAKELVNYDHHVIEVNGRAGVMLTHEWMPLEEHAGPFLLTVVFHHAEKHPRAPQAVQSLVDELKFQVRGQPR
Ga0307413_1131145923300031824RhizospherePCKVKTCMSKSFHQMYPSQAVALCTREQAEQLSPYDHHVIQVGGRPGVMITYEWLPIEEHTGPFVLTVVFQHAEKHPRAPEAIQSIVEELTFQVRRQPR
Ga0302322_10203820713300031902FenMSRPAPFNQINPDQAIAICTLEQAQQLIDFDSQRVLVSDRAGLLLTSTWQPIEKHVGPFVLTVVFHHAETHPSVPDEIQALVNTLKFQVRGQPR
Ga0307412_1014586323300031911RhizosphereMSRPSNFNQIYPDQAIAICTREQAAELVQYDHQRVIVEKRAAVLLTYEWMPIEQHTGPFVLTVVFHHAEKHPLAPEKVQAIVDALRFQVRGQAR
Ga0307416_10060147813300032002RhizospherePDQAIVICTREQAAELVQYDHQRVIVEKRAAVLLTYEWMPIEQHTGPFVLTVVFHHAEKHPPAPEKVQAIVDVLRFQVRGQAR
Ga0307416_10163989823300032002RhizosphereRGIAICTREQAKELVNYDHHVIEVNGRAGVMLTHEWMPLEEHAGPFLLTVVFHHAEKHPRAPQAVQSLVDELTFQVRGQPR
Ga0307414_1053263313300032004RhizosphereSRPSNFNQIYPDQAIAICTREQAAELVQYDHQRVIVEKRAAVLLTYEWMPIEQHTGPFVLTVVFHHAEKHPPAPEKVQAIVDVLRFQVRGQAR
Ga0307415_10011906923300032126RhizosphereMSTSFNQVYPHRGIAICTREQAKELVNYDHHVIEVNGRAGVMLTHEWMPLEEHAGPFLLTVVFHHAEKHPRAPQAVQSLVDELTFQVRGQPR
Ga0307415_10045832123300032126RhizosphereMSRPSNFNQIYPDQAIAICTREQAAELVQYDHHRVIVEKRAAVLLTYEWMPIEQHTGPFVLTVVFHHAEKHPLAPEKVQAIVDALRFQVRGQAR
Ga0316616_10400866413300033521SoilMYPGQAVAICSPEQAEKLVDYDHHMVRVNGQAGVMLTDEWMPLAEHAGPFILTVVFHYAEKHPPAPAEIQAVVDGLTFQVRGQPR

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.