Metagenome Family F044521

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F044521
Family Type	Metagenome
Number of Sequences	154
Average Sequence Length	93 residues
Representative Sequence	LEQGLGSSTWWEEAEYKQLGTANLRALFILDKLIKRDITKFQAAWAVAFPGRLMCEPSQIQPDEVTRGPWLVILTRMGATRDETTDILERVGRRW
Number of Associated Samples	90
Number of Associated Scaffolds	153

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	84.42 %
% of genes near scaffold ends (potentially truncated)	27.92 %
% of genes from short scaffolds (< 2000 bps)	77.27 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (59.740 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (34.416 % of family members)
Environment Ontology (ENVO)	Unclassified (37.662 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (67.532 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.41% β-sheet: 0.00% Coil/Unstructured: 49.59%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
Powered by PDBe Molstar

SCOP family	SCOP domain	Representative PDB	TM-score
d.228.1.1: Replication modulator SeqA, C-terminal DNA-binding domain	d3sk7a1	3sk7	0.79667
g.45.1.2: RecO C-terminal domain-like	d1u5ka2	1u5k	0.56849
f.49.1.1: Proton glutamate symport protein	d7ahka1	7ahk	0.54907
d.110.2.0: automated matches	d3mmha_	3mmh	0.54882
d.144.1.0: automated matches	d6n7aa_	6n7a	0.54817

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 153 Family Scaffolds
PF04392	ABC_sub_bind	7.84
PF05496	RuvB_N	2.61
PF00892	EamA	1.96
PF00083	Sugar_tr	1.96
PF13091	PLDc_2	1.31
PF13365	Trypsin_2	1.31
PF01152	Bac_globin	0.65
PF04471	Mrr_cat	0.65
PF00583	Acetyltransf_1	0.65
PF13276	HTH_21	0.65
PF09509	Hypoth_Ymh	0.65
PF03544	TonB_C	0.65
PF02954	HTH_8	0.65
PF00355	Rieske	0.65
PF01895	PhoU	0.65
PF01381	HTH_3	0.65
PF07589	PEP-CTERM	0.65
PF01255	Prenyltransf	0.65
PF13683	rve_3	0.65
PF07883	Cupin_2	0.65
PF05231	MASE1	0.65
PF02913	FAD-oxidase_C	0.65
PF02577	BFN_dom	0.65
PF04185	Phosphoesterase	0.65
PF08447	PAS_3	0.65
PF01068	DNA_ligase_A_M	0.65

COG ID	Name	Functional Category	% Frequency in 153 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	7.84
COG2255	Holliday junction resolvasome RuvABC, ATP-dependent DNA helicase subunit RuvB	Replication, recombination and repair [L]	2.61
COG0020	Undecaprenyl pyrophosphate synthase	Lipid transport and metabolism [I]	0.65
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.65
COG0642	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.65
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.65
COG1259	Bifunctional DNase/RNase	General function prediction only [R]	0.65
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.65
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.65
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	0.65
COG3447	Integral membrane sensor domain MASE1	Signal transduction mechanisms [T]	0.65
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.65
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.74 %
All Organisms	root	All Organisms	40.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.74 %
cellular organisms	root	All Organisms → cellular organisms	39.61 %
Viruses	superkingdom	All Organisms → Viruses	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.74 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.74 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	14.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.19 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.30 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.74 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	14.29 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.60 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.65 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.65 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.74 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	14.29 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_59_11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_59_11	0.65 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.65 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.65 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.74 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	11.04 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.65 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.65 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_59_11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_59_11	0.65 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.74 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	11.04 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.65 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.65 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_59_11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_59_11	0.65 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.74 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	11.04 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	0.65 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.65 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_59_11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_59_11	0.65 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.74 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	11.04 %
Granulicella sp. L56	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L56	0.65 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.65 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_59_11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_59_11	0.65 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10236517	Not Available	913	Open in IMG/M
3300002245\|JGIcombinedJ26739_100519658	Not Available	1068	Open in IMG/M
3300002245\|JGIcombinedJ26739_101143458	Not Available	666	Open in IMG/M
3300005174\|Ga0066680_10233657	Not Available	1166	Open in IMG/M
3300005406\|Ga0070703_10030395	All Organisms → cellular organisms → Bacteria	1627	Open in IMG/M
3300005434\|Ga0070709_11439679	Not Available	558	Open in IMG/M
3300005444\|Ga0070694_100223077	All Organisms → cellular organisms → Bacteria → Proteobacteria	1415	Open in IMG/M
3300005444\|Ga0070694_100543030	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300005445\|Ga0070708_100032836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4505	Open in IMG/M
3300005445\|Ga0070708_100063846	All Organisms → cellular organisms → Bacteria	3297	Open in IMG/M
3300005445\|Ga0070708_100124477	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2381	Open in IMG/M
3300005445\|Ga0070708_100474267	Not Available	1180	Open in IMG/M
3300005445\|Ga0070708_100605012	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1033	Open in IMG/M
3300005445\|Ga0070708_101282461	Not Available	684	Open in IMG/M
3300005467\|Ga0070706_100003199	All Organisms → cellular organisms → Bacteria	16155	Open in IMG/M
3300005467\|Ga0070706_100118498	Not Available	2466	Open in IMG/M
3300005467\|Ga0070706_100127979	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2369	Open in IMG/M
3300005467\|Ga0070706_100176729	All Organisms → cellular organisms → Bacteria	1993	Open in IMG/M
3300005467\|Ga0070706_100665226	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	966	Open in IMG/M
3300005467\|Ga0070706_101266775	Not Available	677	Open in IMG/M
3300005467\|Ga0070706_102037761	Not Available	519	Open in IMG/M
3300005468\|Ga0070707_100133185	Not Available	2417	Open in IMG/M
3300005468\|Ga0070707_100553651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1112	Open in IMG/M
3300005468\|Ga0070707_100553967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1112	Open in IMG/M
3300005468\|Ga0070707_100871968	Not Available	864	Open in IMG/M
3300005468\|Ga0070707_101231928	Not Available	714	Open in IMG/M
3300005471\|Ga0070698_100106972	All Organisms → cellular organisms → Bacteria	2765	Open in IMG/M
3300005536\|Ga0070697_100877206	Not Available	795	Open in IMG/M
3300005546\|Ga0070696_100642247	All Organisms → cellular organisms → Bacteria → Proteobacteria	860	Open in IMG/M
3300005718\|Ga0068866_11394708	Not Available	512	Open in IMG/M
3300006028\|Ga0070717_11286017	Not Available	665	Open in IMG/M
3300006358\|Ga0068871_101752085	Not Available	589	Open in IMG/M
3300006854\|Ga0075425_101837054	Not Available	680	Open in IMG/M
3300006871\|Ga0075434_101770114	Not Available	625	Open in IMG/M
3300006914\|Ga0075436_100188893	All Organisms → cellular organisms → Bacteria	1457	Open in IMG/M
3300007076\|Ga0075435_100007579	All Organisms → cellular organisms → Bacteria	7749	Open in IMG/M
3300007255\|Ga0099791_10004245	All Organisms → cellular organisms → Bacteria	5866	Open in IMG/M
3300007265\|Ga0099794_10056518	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1899	Open in IMG/M
3300009038\|Ga0099829_10254273	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1433	Open in IMG/M
3300009088\|Ga0099830_10040147	All Organisms → cellular organisms → Bacteria	3237	Open in IMG/M
3300009088\|Ga0099830_11675466	Not Available	530	Open in IMG/M
3300009089\|Ga0099828_10092156	All Organisms → cellular organisms → Bacteria	2606	Open in IMG/M
3300009089\|Ga0099828_10756992	Not Available	871	Open in IMG/M
3300009090\|Ga0099827_10149086	All Organisms → cellular organisms → Bacteria	1913	Open in IMG/M
3300009143\|Ga0099792_10124947	All Organisms → cellular organisms → Bacteria	1387	Open in IMG/M
3300009143\|Ga0099792_10484075	Not Available	772	Open in IMG/M
3300009162\|Ga0075423_12163357	Not Available	604	Open in IMG/M
3300010401\|Ga0134121_11584797	Not Available	674	Open in IMG/M
3300011003\|Ga0138514_100139647	Not Available	537	Open in IMG/M
3300011119\|Ga0105246_12365980	Not Available	520	Open in IMG/M
3300011120\|Ga0150983_12535434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1273	Open in IMG/M
3300011269\|Ga0137392_10142288	Not Available	1930	Open in IMG/M
3300011270\|Ga0137391_10107513	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2417	Open in IMG/M
3300011270\|Ga0137391_11385064	Not Available	549	Open in IMG/M
3300012096\|Ga0137389_10375670	Not Available	1212	Open in IMG/M
3300012189\|Ga0137388_10137316	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L56	2149	Open in IMG/M
3300012189\|Ga0137388_11864803	Not Available	532	Open in IMG/M
3300012201\|Ga0137365_11058563	Not Available	586	Open in IMG/M
3300012202\|Ga0137363_10024306	All Organisms → cellular organisms → Bacteria	4111	Open in IMG/M
3300012202\|Ga0137363_10921736	Not Available	742	Open in IMG/M
3300012202\|Ga0137363_11659370	Not Available	531	Open in IMG/M
3300012205\|Ga0137362_10206483	Not Available	1691	Open in IMG/M
3300012205\|Ga0137362_10363031	Not Available	1254	Open in IMG/M
3300012205\|Ga0137362_11683276	Not Available	521	Open in IMG/M
3300012207\|Ga0137381_10415192	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300012207\|Ga0137381_10931224	Not Available	751	Open in IMG/M
3300012209\|Ga0137379_10633753	Not Available	975	Open in IMG/M
3300012211\|Ga0137377_11519904	Not Available	595	Open in IMG/M
3300012361\|Ga0137360_10732936	Not Available	849	Open in IMG/M
3300012361\|Ga0137360_11675770	Not Available	541	Open in IMG/M
3300012362\|Ga0137361_10194594	Not Available	1832	Open in IMG/M
3300012362\|Ga0137361_10416433	Not Available	1234	Open in IMG/M
3300012362\|Ga0137361_10785639	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	867	Open in IMG/M
3300012362\|Ga0137361_11283770	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300012363\|Ga0137390_10229069	Not Available	1844	Open in IMG/M
3300012363\|Ga0137390_10873459	Not Available	855	Open in IMG/M
3300012363\|Ga0137390_10945199	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	815	Open in IMG/M
3300012363\|Ga0137390_11126142	Not Available	734	Open in IMG/M
3300012582\|Ga0137358_10465636	Not Available	853	Open in IMG/M
3300012582\|Ga0137358_10843394	Not Available	605	Open in IMG/M
3300012917\|Ga0137395_10253913	Not Available	1236	Open in IMG/M
3300012917\|Ga0137395_10455273	Not Available	919	Open in IMG/M
3300012918\|Ga0137396_10170714	Not Available	1590	Open in IMG/M
3300012918\|Ga0137396_10938114	Not Available	632	Open in IMG/M
3300012922\|Ga0137394_10329720	Not Available	1303	Open in IMG/M
3300012923\|Ga0137359_10012685	All Organisms → cellular organisms → Bacteria	7061	Open in IMG/M
3300012929\|Ga0137404_10317677	Not Available	1355	Open in IMG/M
3300012930\|Ga0137407_11585386	Not Available	623	Open in IMG/M
3300019879\|Ga0193723_1004629	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4750	Open in IMG/M
3300019879\|Ga0193723_1188094	Not Available	525	Open in IMG/M
3300020001\|Ga0193731_1110677	Not Available	703	Open in IMG/M
3300020003\|Ga0193739_1006794	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3058	Open in IMG/M
3300020022\|Ga0193733_1194320	Not Available	525	Open in IMG/M
3300020170\|Ga0179594_10402781	Not Available	519	Open in IMG/M
3300021088\|Ga0210404_10001498	All Organisms → cellular organisms → Bacteria	9941	Open in IMG/M
3300021178\|Ga0210408_10005311	All Organisms → cellular organisms → Bacteria	11336	Open in IMG/M
3300021404\|Ga0210389_10677112	Not Available	809	Open in IMG/M
3300021432\|Ga0210384_10097275	All Organisms → cellular organisms → Bacteria → Proteobacteria	2641	Open in IMG/M
3300021432\|Ga0210384_10480330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_59_11	1119	Open in IMG/M
3300025885\|Ga0207653_10069722	Not Available	1200	Open in IMG/M
3300025910\|Ga0207684_10002447	All Organisms → cellular organisms → Bacteria	18730	Open in IMG/M
3300025910\|Ga0207684_10002447	All Organisms → cellular organisms → Bacteria	18730	Open in IMG/M
3300025910\|Ga0207684_10011782	All Organisms → cellular organisms → Bacteria	7628	Open in IMG/M
3300025910\|Ga0207684_10123617	All Organisms → cellular organisms → Bacteria → Proteobacteria	2219	Open in IMG/M
3300025910\|Ga0207684_10136427	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2107	Open in IMG/M
3300025910\|Ga0207684_10207709	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1689	Open in IMG/M
3300025910\|Ga0207684_10942486	Not Available	724	Open in IMG/M
3300025910\|Ga0207684_10958518	Not Available	717	Open in IMG/M
3300025922\|Ga0207646_10083692	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2854	Open in IMG/M
3300025922\|Ga0207646_10238792	All Organisms → Viruses → Predicted Viral	1642	Open in IMG/M
3300025922\|Ga0207646_10266232	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1549	Open in IMG/M
3300025922\|Ga0207646_10282793	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1499	Open in IMG/M
3300025922\|Ga0207646_10291440	Not Available	1475	Open in IMG/M
3300025922\|Ga0207646_10445084	Not Available	1169	Open in IMG/M
3300025922\|Ga0207646_10449401	Not Available	1163	Open in IMG/M
3300025922\|Ga0207646_11638181	Not Available	554	Open in IMG/M
3300026285\|Ga0209438_1022607	Not Available	2099	Open in IMG/M
3300026285\|Ga0209438_1100824	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	873	Open in IMG/M
3300026341\|Ga0257151_1017823	Not Available	743	Open in IMG/M
3300026351\|Ga0257170_1017728	Not Available	920	Open in IMG/M
3300026354\|Ga0257180_1013420	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1007	Open in IMG/M
3300026354\|Ga0257180_1072349	Not Available	504	Open in IMG/M
3300026358\|Ga0257166_1000331	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3330	Open in IMG/M
3300026360\|Ga0257173_1023912	Not Available	781	Open in IMG/M
3300026369\|Ga0257152_1034567	Not Available	546	Open in IMG/M
3300026376\|Ga0257167_1005036	Not Available	1583	Open in IMG/M
3300026496\|Ga0257157_1073979	Not Available	585	Open in IMG/M
3300026497\|Ga0257164_1011000	Not Available	1157	Open in IMG/M
3300026498\|Ga0257156_1084576	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	659	Open in IMG/M
3300026514\|Ga0257168_1112929	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300026515\|Ga0257158_1005095	All Organisms → cellular organisms → Bacteria	1819	Open in IMG/M
3300026515\|Ga0257158_1072743	Not Available	657	Open in IMG/M
3300027603\|Ga0209331_1142815	Not Available	571	Open in IMG/M
3300027633\|Ga0208988_1150613	Not Available	560	Open in IMG/M
3300027651\|Ga0209217_1046907	Not Available	1312	Open in IMG/M
3300027671\|Ga0209588_1069824	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1135	Open in IMG/M
3300027846\|Ga0209180_10023124	All Organisms → cellular organisms → Bacteria	3302	Open in IMG/M
3300027903\|Ga0209488_10150297	Not Available	1758	Open in IMG/M
3300027903\|Ga0209488_11159761	Not Available	523	Open in IMG/M
3300028536\|Ga0137415_10306209	Not Available	1393	Open in IMG/M
3300028673\|Ga0257175_1002529	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2217	Open in IMG/M
3300028828\|Ga0307312_10228633	Not Available	1200	Open in IMG/M
3300031720\|Ga0307469_11891664	Not Available	578	Open in IMG/M
3300031720\|Ga0307469_11971925	Not Available	566	Open in IMG/M
3300031820\|Ga0307473_10048030	Not Available	2000	Open in IMG/M
3300031820\|Ga0307473_10058121	Not Available	1873	Open in IMG/M
3300031820\|Ga0307473_10878599	Not Available	646	Open in IMG/M
3300031962\|Ga0307479_10008582	All Organisms → cellular organisms → Bacteria	9453	Open in IMG/M
3300032180\|Ga0307471_100255002	All Organisms → cellular organisms → Bacteria	1810	Open in IMG/M
3300032180\|Ga0307471_100811722	Not Available	1102	Open in IMG/M
3300032180\|Ga0307471_100816779	Not Available	1099	Open in IMG/M
3300032205\|Ga0307472_100002038	All Organisms → cellular organisms → Bacteria	8308	Open in IMG/M
3300032205\|Ga0307472_100055228	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2502	Open in IMG/M
3300032205\|Ga0307472_101332679	Not Available	693	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.81%
Host-Associated	Host-Associated	5.19%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.81%
Plants	Host-Associated → Plants	5.19%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.90%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.65%
Roots	Host-Associated → Plants → Roots	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.69%
Loam	Environmental → Terrestrial → Soil → Loam	32.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.90%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.65%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	27.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.95%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.65%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.65%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	34.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	27.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.99%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.25%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.30%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.65%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.65%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026341	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-A	Environmental	Open in IMG/M
3300026351	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-B	Environmental	Open in IMG/M
3300026354	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B	Environmental	Open in IMG/M
3300026358	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-B	Environmental	Open in IMG/M
3300026360	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-B	Environmental	Open in IMG/M
3300026369	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-A	Environmental	Open in IMG/M
3300026376	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-B	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_102365171	3300001661	Forest Soil	MEQGLGSSTWWEEAEYEQLGTANLRALFILDKLFKRDTAKFQTAWAVAFPGRLLCEPSQIQPDEVTRGPWLTILSRMGATREETTDILERVGRR
JGIcombinedJ26739_1005196582	3300002245	Forest Soil	LGSSTWWEEADYKQLGTVNDRALFILDKLLKKDSPKFQAAWAVAFPGRLIYETSQIQPDEVTRGPWLVILTRMGATREETTEILERVGRRW*
JGIcombinedJ26739_1011434581	3300002245	Forest Soil	MQQGLGSSTWWEEAEYKQLETANLRALFVLDKLIKRDIAKFQAAWTVAFPGRLMCEPSQIQSDEVTRGPWLVILSRMGATRDETTDILERVGRRW*
Ga0066680_102336572	3300005174	Soil	VGQGLQSSTWWEEADYNQLGTVNDRALFILDKLIKRDITKFQAAWAVAFPGRLMNDRSQIQPEEVTRGPWLVILTRMGATREETTDILERVGRRW*
Ga0070703_100303951	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	VGQGLQSSTWWEEADYKQLGTVNDRALFILDKLIKRDITKFQAAWAVAFPGRLIHEPHQLQPEQVTRGPWLVILTRMGATREETTDILERVGRRW*
Ga0070709_114396793	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VEQGLGSSTWWDEAEYRQLRTVNDRALFILDKLIKRDITKFQAAWAVAFPGRLMNAPQPVQPDEVTRGPWLVILTRMGATREETTDILDRVGRRW*
Ga0070694_1002230771	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MQQGLGSSTWWEEAEYKQLETASLRALFVLDKLIKRDIAKFQAAWTVAFPGRLMCEPSQIQPAEATRGPWLVILTRMGATWSAPQLN*
Ga0070694_1005430301	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VGQGLQSSTWWEEADYKQLGTVNDRALFILDKLIKRDITKFQAAWAVAFPGRLIHEPHQLQPEQVTRGPWLVILTRMGA
Ga0070708_1000328364	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VGQGLQSSTWWEEADYKQLGTVNDRALFILDKLIKRDITKFQAAWAVAFPGRLMNDRSQIQPEEVTRGPWLVILTRMGATREETTDILERVGRRW*
Ga0070708_1000638462	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VEPGLGSSTWWDEAEYRQLGTVNDRALFILGKLIKRDTPKFQAAWGVAFPGRLVYEPRQIQPEEVTRGPWLVILTRMGATREETTDILERVGRRW*
Ga0070708_1001244776	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAQGLGSSAWWDEAEYKQLRTVNLRALFILDKLIKKDIPKFQAAWAVAFPGRLMYEPRQIQPDEVTRGPWLVILSRMGATREETTDILERVGRRW*
Ga0070708_1004742673	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MEPGLGSSTWWEEPAYKQLATVNLRALFVLDKLIEKDIQNFRAAWTVAFPGRPMYEPIQPEQVTRGPWLVILTRMGATREETTDILERVGRRW*
Ga0070708_1006050122	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VEQGLGSSAWWEEAEYKQLETANLRTLFILDKLIKRDITKFQAAWAVAFPGRLMYEPSQIQPDEVTRGPWLVILTRMGATREETTDILERLGRRW*
Ga0070708_1012824611	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAQGLGSSAWWDEAGYKQLGTVNLRALFILDKLIKKDIPKFQAAWAVAFPGRLMCEPSQIQPDEVTRGPWLVILTRMGATREETTDILERVGRRW*
Ga0070706_10000319913	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VDRGLGSSTWWDEAEYMRLGTVTLRALFVLDKLIERGLPKFQAAWAVAFPGCLMCEPSEFQPEEITRGPWLVILTRMGATREETTDILERVGRRW*
Ga0070706_1001184982	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VEPGLGSSTWWDKAEYKQLGTVNDRALFILDKLIKKDMPKFQAAWAVAFPGRLMNDPSQIQADEVTRGPWLVILTRMGATREETTDILERVGRRW*
Ga0070706_1001279793	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VGQGLQSSTWWEEADYNQLGTVNDRALFILDKLIKRDITKFQAAWAVAFPGRLMNDRSQIQPEEVTRGPWLVILTRMGATRE
Ga0070706_1001767292	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VEQGLGSSTWWEEAEYKQLGTVNDRALFILDKLIKRDLTKFQAAWAVAFPGRPMYDPSRTQPDQVTRGPWLVILTRMGATREETTDILERVGRRW*
Ga0070706_1006652261	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VEQGLGSSAWWEEAEYKQLETANLRTLFILDKLIKRDITKFQAAWAVAFPGRLMYEPSQIRPDEVTRGPWLVILTRMGATREETTDILERLGRRW*
Ga0070706_1012667752	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VLFISGERRRGVEQGLGSSTWWDEAEYMQLGTVNDRALFILDKLIKRDTPKFQAAWAVAFPGRLIYEPGQVQPDEVTRGPWLVILTRMGATREETTDI
Ga0070706_1020377612	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MEEGLGSSTWWEEAEYKQLKTANLRALFILDKLIKRDIPKFQAAWAVAFPGRLMSGPRHIQPDEVTRGPWLVILSRMGATREETTD
Ga0070707_1001331853	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VEQGLGSSTWWEEGEYKQLETANLRALFVLDKLMKRDIPKFQAAWAVAFPGRRMYEPSQIQPDEVTRGPWLVILSRMGATREETTDILERVGRRW*
Ga0070707_1005536512	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MEQGMGSSTWWDEADYRRLGTVNDRALFILDKLIKRDIPKFQAAWAVAFPGRLMYEPRQSQPDEVTRGPWLVILSRMGATREETTDILERVGRRW*
Ga0070707_1005539671	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MEQGLGSSTWWEEAEYEQLGTANLRALFILDKLFKSDTAKFRTAWAVAFPGRQMYEPTQIQPDEVTRGPWLTILSRMGATREETTDILERVGRRW*
Ga0070707_1008719681	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MEQGLGSSTWWEEAEYKQLKTANLRALFILDKLIKRDIPKFQAAWAVAFPGRLMSGPRHIQPDEVTRGPWLVILSRMGATREETTDILERVGRRW*
Ga0070707_1012319281	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MEPGLGSSTWWEEPAYKQLATVNLRALFVLDKLIEKDIQNFRAAWTVAFPGRPMYEPIQPEQVTRGPWLVILSRMGATREETTDILERVGRRW*
Ga0070698_1001069724	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MQQGLGSSTWWEEPEYKQLETANLRALFVLDKLIKRNIAKFQAAWTVAFPGRLMCEPSQIQADEVTRGPWLVILTRMGATRDETTDILERVGRRW*
Ga0070697_1008772062	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MEEGLGSSTWWEEAEYKQLKTANLRALFILDKLIKRDIPKFQAAWAVAFPGRRMYEPRQIQPDEVTRGPWLVILSRMGATREETTDILERVGRRW*
Ga0070696_1006422472	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	LEQGLGSGTWWEEAEYKQLGTVNDRALFVLDKLIKRDITKFQAAWAVAFPGRLMNDRSQIQPDEVTRGPWLVILTRMGATREETTDILERVGRRW*
Ga0068866_113947081	3300005718	Miscanthus Rhizosphere	DPRRRDTAMQQGLGSRTWWEEAEYKQLETANLRALFVLDKLIKRDIAKFQAAWTVAFPGRLMCEPSQIQPDEVTRGPWLVILTRMGATRDETTDILERVGRRW*
Ga0070717_112860172	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	GVGQGLQSSTWWEEADYKQLGTVNDRALFILDKLIKRDITKFQAAWAVAFPGRLMNDRSQIQPEEVTRGPWLVILTRMGATREETTDILERVGRRW*
Ga0068871_1017520851	3300006358	Miscanthus Rhizosphere	LEQGLGSSTWWEEAGYKQLGTANLRALFILDRLVKRDITKFQAAWAVAFPGRLMNDRSQIQPDEVTRGPWLVILTRMG
Ga0075425_1018370542	3300006854	Populus Rhizosphere	MEQGLGSSTWWDEADYRRLGTVNDRALFILDKLIKRDIPKFQAAWAVAFPGRLMSGPRHIQPDEVTRGPWLVILSRMGATREETTDILERVGRRW*
Ga0075434_1017701142	3300006871	Populus Rhizosphere	VEPGLGSSTWWEEAEYKQLGTMNYRALFILEKLIKRDMPKFQAAWAIAFPGRLMNDPSQIQPDEVTRGPWLVILTRMGATREETTDILERVGRRW*
Ga0075436_1001888934	3300006914	Populus Rhizosphere	LEQGLGSSTWWEEAGYKQLGTANLRALFILDKLIKRDITKFQAAWAVAFPGRLMNDRSQIQPDEITRGPWLVILSRMGATREETTDILERVGRRW*
Ga0075435_1000075792	3300007076	Populus Rhizosphere	LEQGLGSSTWWEEAGYKQLGTANLRALFILDKLIKRDITKFQAAWAVAFPGRLMNDRSQIQLDEVTRGPWLVILSRMGATREETTDILERVGRRW*
Ga0099791_100042456	3300007255	Vadose Zone Soil	LGSSTWWEEAEYKQLGTVTDRALFVLDKLIKRDITKFQAAWAVAFPGRLIYETGHIQPDEVTRGPWLVILTRMGATREETTDILDRVGRRW*
Ga0099794_100565182	3300007265	Vadose Zone Soil	MEQGLGSSTWWEEAEYKQLGTVNDRALFILDKLIKRDTPKFQAAWAVAFPGRHMNDPSEIQPGEVTRGPWLVILTRMGATREETTDILERVGRRW*
Ga0099829_102542732	3300009038	Vadose Zone Soil	VEQGLGSSTWWDEAEYRQLGTVNDRALFILDKLIKRDIARFQDAWTVAFPGRLMYEPHQRQPDEVTRGPWLVILTRMGATREETTDILARVGRRW*
Ga0099830_100401476	3300009088	Vadose Zone Soil	VEQGLGSSTWWDEAEYRQLGTVNDRALFILDKLIKRDIARFQAAWTVAFPGRLMYEPHQRQPDEVTRGPWLVILTRMGATREETTDILERVGRRW*
Ga0099830_116754662	3300009088	Vadose Zone Soil	QSSTWWEEADYKQLGTVNDRALFILDKLIKRDITKFQAAWAVAFPGRLMNDRSQIQPEEVTRGPWLVILTRMGATREETTDILERVGRRW*
Ga0099828_100921564	3300009089	Vadose Zone Soil	VEQGLGSSTWWDEAEYRQLGTVNDRALFILDKLIKRDIARFQDAWTVAFPGRLMYEPHQRQPDEVTRGPWLVILTRMGATREETTDILERVGRRW*
Ga0099828_107569922	3300009089	Vadose Zone Soil	MEGERKETGVEQGLDSSTWWDEAEYRQLGTVNDRALFILDKLLKRDIPKFQAAWAVAFPGRLMYEPSEIQPDEVTRGPWLVILTRMGATREETTDILERVGRRW*
Ga0099827_101490864	3300009090	Vadose Zone Soil	MGQGLGSSTWWEEAEYQQLETVNLRALFILDKLIKRDIPKFQAAWAVAFPGRLMCEPGQIQPDEVTRGPWLVILTRMGATREETTDILKRVGRRW*
Ga0099792_101249471	3300009143	Vadose Zone Soil	LGSSTWWEEAEYKQLGTVNDRALFVLHKLITRDITKFQAAWAVAFPGRPMYEPRQIQPDQVTRGPWLVILTRMGATREETTDILERVGRRW*
Ga0099792_104840751	3300009143	Vadose Zone Soil	MEQGLGSNTWWEEREYKQLGTSNLRALFILDKLLKRDTPKFQAAWAVAFPGRRSYETSHIQPDEVTRGPWLVILTRMGATRDETTDILERVGRRW*
Ga0075423_121633572	3300009162	Populus Rhizosphere	LGSSTWWEEAGYKQLGTANLRALFILDKLIKRDITKFQAAWAVAFPGRLMNDRSQIQPDEVTRGPWLVILIRMGATREETTDILERVGRRW*
Ga0134121_115847971	3300010401	Terrestrial Soil	MQQGLGSSTWWEEAEYKQLETANLRALFVLDKLIKRDIAKFQAAWTVAFPGRLMCEPSQIQPDEVTRGPWLVILTRMGATRDETTDILERVGRRW*
Ga0138514_1001396471	3300011003	Soil	MQQGLASSTWWEEAEYKQLETANRRALFVLDKLIKRDIAKFQAAWTVAFPGRPMGEPSQIQPDEVTRGPWLVILTRMGATRDETTDILERAGRRW*
Ga0105246_123659801	3300011119	Miscanthus Rhizosphere	LEQGLGSSTWWEEAGYKQLGTANLRALFILDRLVKRDITKFQAAWAVAFPGRLMNDRSQIQPDEVTRGPWLVILTRMGATREETTDILERVGRRW*
Ga0150983_125354342	3300011120	Forest Soil	MQQGLGSSTWWEEAEYKQLETAHLRALFVLDKLIERDITKFQAAWAVAFPGRLLCEPSQIQPDEVTRGPWLVILTRMGATRDETTDILERVGRRW*
Ga0137392_101422886	3300011269	Vadose Zone Soil	LGSSTWWEEAEYKQLGTVTDRALFVLDKLIKRDITKFQAAWAVAFPGRLMCEPSQIQPDEVTRGPWLVILTRMGATREE
Ga0137391_101075132	3300011270	Vadose Zone Soil	LQSSTWWEEADYKQLGTVNDRALFILDKLIKRDITKFQAAWAVAFPGRLMNDRSQIQPEEVTRGPWLVILTRMGATREETTDILERVGRRW*
Ga0137391_113850642	3300011270	Vadose Zone Soil	VEQGLGSSTWWEEAEYKQLGTVNDRALFVLHKLITRDITKFQAAWAVAFPGRPMYEPRQIQPDQVTRGPWLVILTRMGATREETTDILERVGRRW*
Ga0137389_103756704	3300012096	Vadose Zone Soil	MEVMEGERKETGVEQGLDSSTWWDEAEYRQLGTVNDRALFILDKLLKRDIPKFQAAWAVAFPGRLMYEPSEIQPDEVTRGPWLVILTRMGATREE
Ga0137388_101373163	3300012189	Vadose Zone Soil	VEQGLGSSTWWDEAEYRQLGTVNDRALFILDKLIKRDIASFQAAWTVAFPGRLMYEPHQRQPDEVTRGPWLVILTRMGATREETTDILERVGRRW*
Ga0137388_118648031	3300012189	Vadose Zone Soil	MEEGLGSNAWWEEPAYRQLATANLRALFVLDKLIDRDIQKFRAAWTVAFPGRPMYEGGQIQPDEVTRGPWLVILTRMG
Ga0137365_110585631	3300012201	Vadose Zone Soil	STWWEEAEYKQLETVNLRALFILDKLIKRDIPKFQAAWAVAFPGRLRCEPGQIQPDEVTRGPWLVILTRMGATREETTDILKRVGRRW*
Ga0137363_1002430610	3300012202	Vadose Zone Soil	LGSSTWWEEAEYKQLGTVTDRALFVLDKLIKRDITKFQAAWAVAFPGRLIYETGHIQPDEVTRGPWLVILTRMGATREETT
Ga0137363_109217362	3300012202	Vadose Zone Soil	EYKQLGTVNDRALFILDKLIKRDITKFQAAWAVAFPGRLMNDRGQIQPDEVTRGPWLVILSRMGATREETTDILARVGRRW*
Ga0137363_116593702	3300012202	Vadose Zone Soil	MEQGLGSRTWWEEAEYKQLGTVNDRALFILDKLIKRDITKFQAACAGAFPGRPMDDLRQIQPDEVTRGPWLVILTRMGA
Ga0137362_102064832	3300012205	Vadose Zone Soil	LGSGTWWEETEYKQLGTVNDRALFILDKLIKRDITKFQAAWAVAFPGRLMNDRGQIQPDEVTRGPWLVILSRMGATREETTDILARVGRRW*
Ga0137362_103630312	3300012205	Vadose Zone Soil	MKHRQLGTVNDRALFILDKLIKRDIARFQAAWAVAFPGRLNYEPKQIQPGEVTRGPWLVILTRMGATREETTDILERVGRRW*
Ga0137362_116832761	3300012205	Vadose Zone Soil	KETAMEQGLGSNTWWEESEYKQLGTSNLRALFILDKLLKRDTPKFQAAWAVAFPGRLMNDPSQIQPDEVRRGPWLVILTRMGATGDETTDILERVGRRW*
Ga0137381_104151921	3300012207	Vadose Zone Soil	MGQGLGSSTWWEEAEYKQLETVNLRALFILDKLIKRDIPKFQAAWAVAFPGRLRCEPGQIQPDEVTRGPWLVILTRMGATREETTDILKRVGRRW*
Ga0137381_109312242	3300012207	Vadose Zone Soil	LQSSTWWEEADYNQLGTVNDRALFILDKLIKRDITKFQAAWAVAFPGRLMNDRSQIQPEEVTRGPWLVILTRMGATREETTDILERVGRRW*
Ga0137379_106337532	3300012209	Vadose Zone Soil	LGSSTWWEEAEYKQSANLRALFILDKLIKRDMPKFQAAWAVAFPGRHVHETSQIQPGEVTRGPWLVILTRMGATREETTDILERVGRRW*
Ga0137377_115199042	3300012211	Vadose Zone Soil	VEQGLGSSTWWDEVEYRHLGTVNDRALFILDKLIKRDTPKFQAAWTVAFPGRLIYDPHQRQPDEVTRGPWLVILTRMGATREETTDILERVGRRW*
Ga0137360_107329361	3300012361	Vadose Zone Soil	LEQGLGSGTWWEETEYKQLGTVNDRALFILDKLIKRDITKFQAAWAVAFPGRLMNDRGQIQPDEVTRGPWLVILSRMGATREETTDILARVGRRW*
Ga0137360_116757701	3300012361	Vadose Zone Soil	MEQGLGSNTWWEEREYKQLGTSNLRALFILDKLLKRDITRFQAAWAVAFPGRRSYETSHIQPGDVTRGPWLVILTRMGATREETTDI
Ga0137361_101945945	3300012362	Vadose Zone Soil	HQPRKETGVGEGLGSSTWWEEAEYKQLGTVTDRALFVLDKLIKRDITKFQAAWAVAFPGRLIYETGHIQPDEVTRGPWLVILTRMGATREETTDILDRVGRRW*
Ga0137361_104164331	3300012362	Vadose Zone Soil	MEEGLGSNTWWEEPAYRQLATANLRALFVLDKLIDRDIQKFRAAWTVAFPGRPMYERGQIQPDEVTRGPWLMILTRMGATREETTDILERVGRRW*
Ga0137361_107856391	3300012362	Vadose Zone Soil	LGSSTWWEEAEYKQTANLRALFILDKLIKRDMPKFQAAWAVAFPGRHVHETSQIQPGEVTRGPWLVILTRMGATREETTDILERVGRRW*
Ga0137361_112837701	3300012362	Vadose Zone Soil	MEQGLGSNTWWEEREYKQLGTSNLRALFILDKLLKRDTPKFQAAWAVAFPGRLIDETSHIQPDEVTRGPWLVILTRMGATREETTDILDRVGR
Ga0137390_102290693	3300012363	Vadose Zone Soil	VEQGLGSSTWWDEAEYRQLGTVNDRALFILDKLIKRDIARFQAAWTVAFPGRLMYEPHQRQPDEVTRVPWLVILTRMGATREETTDILERVGRRW*
Ga0137390_108734591	3300012363	Vadose Zone Soil	RRKETAMEQGLGSSTWWEDAAYEQLGTVNLRALFILDKLIKKDIPKFQAAWAVALPGRLMCEPGQIQPDQVTRGPWLVILTRMGATREETTDILERVGRRW*
Ga0137390_109451991	3300012363	Vadose Zone Soil	MEQGLGSNTWWEEREYKQLGTSNLRALFILDKLLKRDITRFQAAWAVAFPGRRSYETSHIQPDDVTRGPWLVILTRMGATREETTDILDRVGRRW*
Ga0137390_111261421	3300012363	Vadose Zone Soil	VEKGLGSSTWWEEAEYKQLGTANLRALFILDKLIRKDIPKFQAAWAVAFPGRLMYEPSQIQPDEVTRGPWLVILSRMGATREETTDILERVGRRW*
Ga0137358_104656361	3300012582	Vadose Zone Soil	KRRRGVEQGLGSSTWWDEAEYRQLRTVNDRALFILDKLIKRDITKFQAAWAVAFPGRLMNAPQPVQPDEVTRGPWLVILTRMGATREETTDILDRVGRRW*
Ga0137358_108433941	3300012582	Vadose Zone Soil	LGSSTWWEEAEYKQSANLRALFILDKLIKRDMPKFQAAWAVAFPGRHVHETSQIQPGEVTRGPWLVILTRMGATREETTDILDRVGRRW*
Ga0137395_102539132	3300012917	Vadose Zone Soil	LEQGLGSSTWWEEAEYKQLGTANLRALFILDKLIKRDITKFQAAWAVAFPGRLMCEPSQIQPDEVTRGPWLVILTRMGATRDETTDILERVGRRW*
Ga0137395_104552733	3300012917	Vadose Zone Soil	MEQGLGSNTWWEESEYKQLGTSNLRALFILDKLLKRDTPKFQAAWAVAFPERLIYETSHIQPDEVTRGPWLVILTRMGATREETTDILDRVGRRW*
Ga0137396_101707142	3300012918	Vadose Zone Soil	MEQGLGSSTWWEEAEYEQLGTANLRALFILDKLFKRNTAKFQTAWAVAFPGRLLCEPSQIQPDEVTRGPWLTILSRMGATREETTDILERVGRRW*
Ga0137396_109381141	3300012918	Vadose Zone Soil	LGSSTWWEEAGYKQLGTGNLRALFILDKLIKRDTPKFQAAWAVAFPGRHMNDPSEIQPGEVTRGPWLVILTRMGATREETTDILDRVGRRW*
Ga0137394_103297202	3300012922	Vadose Zone Soil	MEQGLGSSTWWEEAEYEQLGTANLRALFILDKLFKRDTAKFQTAWAVAFPGRLLCEPSQIQPDEVTRGPWLTILSRMGATREETTDILERVGRRW*
Ga0137359_1001268512	3300012923	Vadose Zone Soil	MEQGLGSRTWWEEAEYKQLGTVNDRALFILDKLIKRDITKFQAACAGAFPGRPMDDLRQIQPDEVTRGPWLVILTRMGATRDETTDILERVGRRW*
Ga0137404_103176772	3300012929	Vadose Zone Soil	MGSGSHQRREETEVEQRLGSSTWWEEAEYKQSANLRALLILDKLIKRDMPKFQAAWAVAFPGRHVHETSQIQPGEVTRGPWLVILTRMGATREETTDILERVGRRW*
Ga0137407_115853862	3300012930	Vadose Zone Soil	MGSGSHQRREETEVEQRLGSSTWWEEAEYKHLGTPNLRALFILDKLIKRNTPKFQAAWAVAFPGRLMNDRGQIQPDEVTRGPWLVILTRMGATREETTDILERVGRRW*
Ga0193723_10046293	3300019879	Soil	MEQGLGSTTWWEEAEYKQLGTANLRALFVLDKLIKKNTPKFQAAWAVAFPGRLMYEPSQIQPDEVTRGPWLVILTRMGATREETTDILGRVGRRW
Ga0193723_11880941	3300019879	Soil	EESEYKQLETANLRALFVLDKLIKRDIAKFQAAWTVAFPGRLMCEPSQIQPDEVRRGPWLVILTRMGATRDETTDILERVGRRW
Ga0193731_11106773	3300020001	Soil	TWWEEAEYKQLETANLRALFVLDKLIKRDIAKFQAAWTVAFPGRLMCEPSQIQPDAVTRGPWLVILTRMGATRDETTDIPERVGRRW
Ga0193739_10067945	3300020003	Soil	VEQGLGSSTWWEEAEYKQLGTANLRALFILDKLFKRDTPKLQTAWAIAFPGRQMHEPRQIQPDEVTRGPWLTILSRMGATREETTDILERVGRRW
Ga0193733_11943202	3300020022	Soil	LGTVNDRALFILDKLIKRDTPKFQAAWAAAFPERLMYEPRQIQSDEVTRGPWLVILTRMGATRDETTDILERVGRRW
Ga0179594_104027811	3300020170	Vadose Zone Soil	MEQGLGSSTWWEEAEYEQLGTANLRALFILDKLFKRDTAKFQTAWAVAFPGRLLCEPSQIQPDEVTRGPWLTILSRMGATREETTDILERVGRRW
Ga0210404_100014982	3300021088	Soil	MQQGLGSSTWWEEAEYKQLETAHLRALFVLDKLIERDITKFQAAWAVAFPGRLLCEPSQIQPDEVTRGPWLVILTRMGATRDETTDILERVGRRW
Ga0210408_100053115	3300021178	Soil	MQQGLGSCTWWEEAEYKQLETAHLRALFVLDKLIERDITKFQAAWAVAFPGRLLCEPSQIQPDEVTRGPWLVILTRMGATRDETTDILERVGRRW
Ga0210389_106771122	3300021404	Soil	VEQGLGSSTWWDEAEYRQLRTVNDRALFILDKLIKRDITKFQAAWAVAFPGRLTNAPQPVQSDEVTRGPWLVILTRMGATREETTDILDRVGRRW
Ga0210384_100972751	3300021432	Soil	DEAEYRQLRTVNDRALFILDKLIKRDITKFQAAWAVAFPGRLTNAPQPVQSDEVTRGPWLVILTRMGATREETTDILDRVGRRW
Ga0210384_104803302	3300021432	Soil	LEQGLGSGTWWEEAEYKQLGIVNDRALFILDKLIKRDITKFQAAWAVAFPGRLMNDRSQIQPDEVTRGPWLVILSRMGATREETTDILARVGRRW
Ga0207653_100697223	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	VEPGLGSSTWWDEAEYSQLGTVNDRALFILGKLIKRDTPKFQAAWGVAFPGRLVYEPRQIQPEEVTRGPWLVILTRMGA
Ga0207684_1000244713	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VGQGLQSSTWWEEADYKQLGTVNDRALFILDKLIKRDITKFQAAWAVAFPGRLIHEPHQLQPEQVTRGPWLVILTRMGATREETTDILERVGRRW
Ga0207684_1000244727	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VEPGLGSSTWWDEAEYRQLGTVNDRALFILGKLIKRDTPKFQAAWGVAFPGRLVYEPRQIQPEEVTRGPWLVILTRMGATREETTDILERVGRRW
Ga0207684_100117823	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VDRGLGSSTWWDEAEYMRLGTVTLRALFVLDKLIERGLPKFQAAWAVAFPGCLMCEPSEFQPEEITRGPWLVILTRMGATREETTDILERVGRRW
Ga0207684_101236173	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VEQGLGSSTWWEEAEYKQLGTVNDRALFILDKLIKRDLTKFQAAWAVAFPGRPMYDPSRTQPDQVTRGPWLVILTRMGATREETTDILERVGRRW
Ga0207684_101364271	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VGQGLQSSTWWEEADYNQLGTVNDRALFILDKLIKRDITKFQAAWAVAFPGRLMNDRSQIQPEEVTRGPWLVILTRMGATREETTDILERVGRRW
Ga0207684_102077094	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VEQGLGSSAWWEEAEYKQLETANLRTLFILDKLIKRDITKFQAAWAVAFPGRLMYEPSQIQPDEVTRGPWLVILTRMGATREETTDILERLGRRW
Ga0207684_109424861	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MEEGLGSSTWWEEAEYKQLKTANLRALFILDKLIKRDIPKFQAAWAVAFPGRLMSGPRHIQPDEVTRGPWLVILSRMGATREETTDILERVGRRW
Ga0207684_109585182	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MEPGLGSSTWWEEPAYKQLATVNLRALFVLDKLIEKDIQNFRAAWTVAFPGRPMYEPIQPEQVTRGPWLVILTRMGATREETTDILERVGRRW
Ga0207646_100836925	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VGQGLQSSTWWEEADYKQLGTVNDRALFILDKLIKRDITKFQAAWAVAFPGRLMNDRSQIQPEEVTRGPWLVILTRMGATREETTDILERVGRRW
Ga0207646_102387925	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VEQGLGSSTWWEEGEYKQLETANLRALFVLDKLMKRDIPKFQAAWAVAFPGRRMYEPSQIQPDEVTRGPWLVILSRMGATREETTDILERVGRRW
Ga0207646_102662322	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MEQGMGSSTWWDEADYRRLGTVNDRALFILDKLIKRDIPKFQAAWAVAFPGRLMYEPRQSQPDEVTRGPWLVILSRMGATREETTDILERVGRRW
Ga0207646_102827932	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VEQGLGSSAWWEEAEYKQLETANLRTLFILDKLIKRDITKFQAAWAVAFPGRLMYEPSQIQPDEVTRGPWLVILTRMGAPREETTDILERLGRRW
Ga0207646_102914404	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MAQGLGSSAWWDEAGYKQLGTVNLRALFILDKLIKKDIPKFQAAWAVAFPGRLMCEPSQIQPDEVTRGPWLVILTRMGATREETTDILERVGRRW
Ga0207646_104450843	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VEPGLGSSTWWDKAEYKQLGTVNDRALFILDKLIKKDMPKFQAAWAVAFPGRLMNDPSQIQADEVTRGPWLVILTRMGATREETTDILERVGRRW
Ga0207646_104494013	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	PTCYARPANLRIRAALCFHQRREGTPMEQGLGSSTWWEEAEYEQLGTANLRALFILDKLFKSDTAKFRTAWAVAFPGRQMYEPTQIQPDEVTRGPWLTILSRMGATREETTDILERVGRR
Ga0207646_116381811	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MEQGLGSSTWWEEAEYKQLKTANLRALFILDKLIKRDIPKFQAAWAVAFPGRLMSGPRHIQPDEVTRGPWLVILSRMGATREETTDILERVGRRW
Ga0209438_10226073	3300026285	Grasslands Soil	VGEGLGSSTWWEEAEYKQLGTVTDRALFVLDKLIKRDITKFQAAWAVAFPGRLIYETGHIQPDEVTRGPWLVILTRMGATREETTDILDRVGRRW
Ga0209438_11008242	3300026285	Grasslands Soil	VEPGLGSSTWWEEAEYKQLGTMNYRALFILDKLIKRDMLKFQAAWAIAFPGRLMNDPSQIQPDEVTRGPWLVILTRMGATGEETTDILERVGRRW
Ga0257151_10178233	3300026341	Soil	QLGTVTDRALFVLDKLIKRDITKFQAAWAVAFPGRLIYETGHIQPDEVTRGPWLVILTRMGATREETTDILDRVGRRW
Ga0257170_10177282	3300026351	Soil	MEVMEGERKETGVEQGLDSSTWWDEAEYRQLGTVNDRALFILDKLLKRDIPKFQAAWAVAFPGRLMYEPSEIQPDEVTRGPWLVILTRMGATREETTDILERVGRRW
Ga0257180_10134201	3300026354	Soil	VEQGLGSSTWWDEAEYRQLGTVNDRALFILDKLIKRDIARFQAAWTVAFPGRLMYEPHQRQPDEVTRGPWLVILTRMGATREETTDILERVGRRW
Ga0257180_10723491	3300026354	Soil	VEQGLGSSTWWDEAEYRELGTVNDRALFILDKLIKRDTPKFQAAWAVAFPGRLIYEPRQIQPDQITRGPWLVILTRMGATREETTDILERVGRRW
Ga0257166_10003319	3300026358	Soil	VGEGLGSSTWWEEAEYKQLGTVTDRALFVLDKLIKRDITKFQAAWAVAFPGRLIYETGHIQPDEVTRGPWLVILTRMGATREETTDILD
Ga0257173_10239123	3300026360	Soil	VEQGLGSSTWWDEAEYRQLGTVNDRALFILDKLIKRDIARFQAAWTVAFPGRLMYEPHQRQPDEVTRGPWLVILTRMGATREET
Ga0257152_10345671	3300026369	Soil	FHQPRKETGVGEGLGSSTWWEEAEYKQLGTVTDRALFVLDKLIKRDITKFQAAWAVAFPGRLIYETGHIQPDEVTRGPWLVILTRMGATREETTDILDRVGRRW
Ga0257167_10050362	3300026376	Soil	VGEGLGSSTWWEETEYKQLGTVTDRALFVLDKLIKRDITKFQAAWAVAFPGRLIYETGHIQPDEVTRGPWLVILTRMGATREETTDILDRVGRRW
Ga0257157_10739792	3300026496	Soil	MEQGLGSSTWWEEAEYKQLATVSLRALFILDKLNKRDLPKFQAAWAVAFPGRLMYEPRQIQPDEVTRGPWLVILSRMGATREETTDILERVGRRW
Ga0257164_10110001	3300026497	Soil	LGSSTWWEEAEYKQLGTVTDRALFVLDKLIKRDITKFQAAWAVAFPGRLIYETGHIQPDEVTRGPWLVILTRMGATREETTDILDRVGRRW
Ga0257156_10845762	3300026498	Soil	VGEGLGSSTWWEEAEYKQSANLRALFILDKLIKRDMPKFQAAWAVAFPGRHVHETSQIQPGEVTRGPWLVILTRMGATREETTDILERVGRRW
Ga0257168_11129291	3300026514	Soil	GSGTWWEEAEYKQQGTVNDRALFILDKLIKRDITKFQAAWAVAFPGRLMNDRSQIQPDEVTRGPWLVILSRMGATREETTDILARVGRRW
Ga0257158_10050952	3300026515	Soil	MDQGLGSSTWWEEAEYKQLATVSLRALFILDKLNKRDLPKFQAAWAVAFPGRHMNDPSEIQPGEVTRGPWLVILTRMGATREETTDILERVGRRW
Ga0257158_10727431	3300026515	Soil	MQQGLGSSTWWEEPEYKQLETANLRALFVLDKLIKRDIAKFQAAWAVAFPGRLMNDRSQIQPDEVTRGPWLVILTRMGATR
Ga0209331_11428152	3300027603	Forest Soil	MQQGLGSSTWWEEAEYEQLETANLRALFVLDKLIKRDIVKFQAAWIVAFPGRLMCEPSQIQPDEVTRGPWLVILTRMGATRDETTDILERVGRRW
Ga0208988_11506132	3300027633	Forest Soil	MEQGLGSSTWWEEAEYEQLGTANLRALFILDKLFKRDTAKFQTAWAVAFPGRLLCEPSQIQPDEVTRGPWLTILSRMG
Ga0209217_10469072	3300027651	Forest Soil	LERGLGSSTWWEEADYKQLGTVNDRALFILDKLLKKDSPKFQAAWAVAFPGRLIYETSQIQPDEVTRGPWLVILTRMGATREETTEILERVGRRW
Ga0209588_10698242	3300027671	Vadose Zone Soil	MEQGLGSSTWWEEAEYKQLGTVNDRALFILDKLIKRDTPKFQAAWAVAFPGRHMNDPSEIQPGEVTRGPWLVILTRMGATREETTDILERVGRRW
Ga0209180_100231246	3300027846	Vadose Zone Soil	VEQGLGSSTWWDEAEYRQLGTVNDRALFILDKLIKRDIARFQDAWTVAFPGRLMYEPHQRQPDEVTRGPWLVILTRMGATREETTDILERVGRRW
Ga0209488_101502971	3300027903	Vadose Zone Soil	VEQGLGSSTWWEEAEYKQLGTVNDRALFVLHKLITRDITKFQAAWAVAFPGRPMYEPRQIQPDQVTRGPWLVILTRMGATREETTDILDRVGRRW
Ga0209488_111597612	3300027903	Vadose Zone Soil	PMEQALGSNTWWEESEYKQLGTLNLRALFILDKLLKRDTPKFQAAWAVAFPGRRSYETSHIQPDEVTRGPWLVILTRMGATRDETTDILERVGRRW
Ga0137415_103062093	3300028536	Vadose Zone Soil	MEQGLGSSTWWEEAEYEQLGTANLRALFILDKLFKRNTAKFQTAWAVAFPGRLLCEPSQIQPDEVTRGPWLTILSRMGATREETTDILERVGRRW
Ga0257175_10025291	3300028673	Soil	RKETGVEQGLDSSTWWDEAEYRQLGTVNDRALFILDKLLKRDIPKFQAAWAVAFPGRLMYEPSEIQPDEVTRGPWLVILTRMGATREETTDILERVGRRW
Ga0307312_102286334	3300028828	Soil	MQQRLGSSTWWEEAEYKQLETANLRALFVLDKLIKRDIAKFQAAWTVAFPGRLMCEPSQIQPDAVTRGPWLVILPRMGATRDETTDILERVGRRW
Ga0307469_118916642	3300031720	Hardwood Forest Soil	TWWEEAEYKQLGTVNDRALFILDKLIERDLTKFQAAWAVAFPGRPMYDPSRTQPDQVTGGPWLVILTRMGATREETTDILERVGRRW
Ga0307469_119719251	3300031720	Hardwood Forest Soil	MEQGLGSSAWWEEAEYKQLGTANLRALFILDRLLKRDIPKFQAAWAVAFSGRLMYELSQIQPDEVAGDPWLVILTRMGATREETTDILERVGRRW
Ga0307473_100480305	3300031820	Hardwood Forest Soil	LEPGLGSSTWWDEAEYRQLGTVNDRALFILGKLIKRDTPKFQAAWAVAFPGRLVYEPRQLQPEEVTRGPWLVILTRMGATREATTDILERVGRRW
Ga0307473_100581211	3300031820	Hardwood Forest Soil	VEPGLGSSTWWDEAEYRQLGTVNDRALFILGKLIKRDTQKFQAAWGVAFPGRLVYEPRQIQPEEVTRGPWLVILTRMGATREETTDILERVGRRW
Ga0307473_108785991	3300031820	Hardwood Forest Soil	TWWEEAEYEQLKTANLRALFILDKLIKRDIPKFQAAWAVAFPGRLMSGPRHIQPDEVTRGPWLVILSRMGATREETTDILERVGRRW
Ga0307479_100085822	3300031962	Hardwood Forest Soil	LEPGLGSGTWWDEAEYRQLGTVNDRALFILGKLIKRDTPKFQAAWAVAFPGRLVYEPRQLQPEEVTRGPWLVILTRMGATREATTDILERVGRRW
Ga0307471_1002550021	3300032180	Hardwood Forest Soil	VEQGLGSSTWWEEAEYKQLGTVNDRALFILDKLIKRDLTKFQAAWAVAFPGRLKREPNQIQADEVTRGPWLVILTRMGATRDETTDIL
Ga0307471_1008117223	3300032180	Hardwood Forest Soil	MGLGSSTWWEEAEYKQLKTANLRALFILDKLIKRDIPKFQAAWAVAFPGRLMSGPRHIQPDEVTRGPWLVILSRMGATREETTDILERVGRRW
Ga0307471_1008167791	3300032180	Hardwood Forest Soil	STWWEEPAYKQLATVNLRALFVLDKLIEKDIQNFRAAWTVAFPGRPMYEPIQPEQVTRGPWLVILTRMGATREETTDILERVGRRW
Ga0307472_1000020382	3300032205	Hardwood Forest Soil	VGQGLQSSTWWEEADYKQLGTVNDRALFILDKLIKRDITKFQAAWAVAFPGRLIHEPHQLQPEQVTRGPWLVILTRMGATRGETTDILERVGRRW
Ga0307472_1000552288	3300032205	Hardwood Forest Soil	VEQGLGSSAWWEEAEYKQLETANLRTLFILDKLIKRDITKFQAAWAVAFPGRLMYEPSQIQPDEVTRGPWLVILTRMGATREETTDI
Ga0307472_1013326791	3300032205	Hardwood Forest Soil	MEQGLGSSAWWEEAEYKQLGTANLRALFILDRLLKRDIPKFQAAWAVAFSGRLMYELSQIQPDEVAGDPWLVILTRMGA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F044521

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences