Metagenome / Metatranscriptome Family F044886

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F044886
Family Type	Metagenome / Metatranscriptome
Number of Sequences	153
Average Sequence Length	59 residues
Representative Sequence	MNRTNEYRAKGFELLSLAESMNDPERRADMLRYARMWMSLSEPMPDLPSAYELPRRH
Number of Associated Samples	80
Number of Associated Scaffolds	153

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	74.51 %
% of genes near scaffold ends (potentially truncated)	32.03 %
% of genes from short scaffolds (< 2000 bps)	86.27 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (64.706 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (60.784 % of family members)
Environment Ontology (ENVO)	Unclassified (61.438 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (62.092 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.00% β-sheet: 0.00% Coil/Unstructured: 60.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 153 Family Scaffolds
PF08734	GYD	5.88
PF03992	ABM	1.96
PF00343	Phosphorylase	1.31
PF00920	ILVD_EDD	1.31
PF13545	HTH_Crp_2	0.65
PF13586	DDE_Tnp_1_2	0.65
PF01966	HD	0.65
PF00239	Resolvase	0.65
PF07045	DUF1330	0.65
PF13557	Phenol_MetA_deg	0.65
PF01842	ACT	0.65
PF00346	Complex1_49kDa	0.65
PF00583	Acetyltransf_1	0.65
PF02321	OEP	0.65
PF13751	DDE_Tnp_1_6	0.65
PF13924	Lipocalin_5	0.65
PF13506	Glyco_transf_21	0.65
PF10129	OpgC_C	0.65

COG ID	Name	Functional Category	% Frequency in 153 Family Scaffolds
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	5.88
COG0129	Dihydroxyacid dehydratase/phosphogluconate dehydratase	Carbohydrate transport and metabolism [G]	2.61
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.31
COG0058	Glucan phosphorylase	Carbohydrate transport and metabolism [G]	1.31
COG0649	NADH:ubiquinone oxidoreductase 49 kD subunit (chain D)	Energy production and conversion [C]	0.65
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.65
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.65
COG3261	Ni,Fe-hydrogenase III large subunit	Energy production and conversion [C]	0.65
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.71 %
All Organisms	root	All Organisms	35.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.71 %
cellular organisms	root	All Organisms → cellular organisms	35.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.71 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	35.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	18.30 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.65 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.65 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.65 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.71 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	5.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.92 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.65 %
Chlorobi	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi	0.65 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.65 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.88 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.61 %
Chlorobia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia	0.65 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.65 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.65 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.65 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.65 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.88 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.96 %
Chlorobiales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales	0.65 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.65 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.65 %
unclassified Bradyrhizobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae	0.65 %
Methylocella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella	0.65 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.65 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.88 %
Chlorobiaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae	0.65 %
Methylocella tundrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella → Methylocella tundrae	0.65 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.65 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	0.65 %
Bradyrhizobium archetypum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium archetypum	0.65 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.65 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.65 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.65 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.88 %
Bradyrhizobium sp. UFLA03-84	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. UFLA03-84	0.65 %
Prosthecochloris	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Prosthecochloris	0.65 %
Methylocella tundrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella → Methylocella tundrae	0.65 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	0.65 %
Bradyrhizobium archetypum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium archetypum	0.65 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.65 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.65 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.65 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.88 %
Prosthecochloris vibrioformis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Prosthecochloris → Prosthecochloris vibrioformis	0.65 %
Bradyrhizobium sp. UFLA03-84	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. UFLA03-84	0.65 %
Methylocella tundrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella → Methylocella tundrae	0.65 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	0.65 %
Bradyrhizobium archetypum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium archetypum	0.65 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.65 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.65 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.65 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10677856	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300004633\|Ga0066395_10814619	Not Available	561	Open in IMG/M
3300005174\|Ga0066680_10589313	Not Available	697	Open in IMG/M
3300005179\|Ga0066684_10343123	Not Available	998	Open in IMG/M
3300005332\|Ga0066388_100101416	All Organisms → cellular organisms → Bacteria	3343	Open in IMG/M
3300005332\|Ga0066388_100610714	All Organisms → cellular organisms → Bacteria	1712	Open in IMG/M
3300005332\|Ga0066388_105186074	Not Available	661	Open in IMG/M
3300005332\|Ga0066388_105354949	Not Available	651	Open in IMG/M
3300005445\|Ga0070708_100218486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella → Methylocella tundrae	1787	Open in IMG/M
3300005554\|Ga0066661_10582308	Not Available	666	Open in IMG/M
3300005556\|Ga0066707_10623582	Not Available	686	Open in IMG/M
3300005556\|Ga0066707_10861903	Not Available	557	Open in IMG/M
3300005586\|Ga0066691_10804559	Not Available	554	Open in IMG/M
3300005598\|Ga0066706_10490375	Not Available	979	Open in IMG/M
3300005713\|Ga0066905_101357902	Not Available	642	Open in IMG/M
3300005713\|Ga0066905_102321870	Not Available	502	Open in IMG/M
3300005764\|Ga0066903_100317945	All Organisms → cellular organisms → Bacteria → Proteobacteria	2482	Open in IMG/M
3300005764\|Ga0066903_100901069	All Organisms → cellular organisms → Bacteria → Proteobacteria	1600	Open in IMG/M
3300005764\|Ga0066903_101095979	All Organisms → cellular organisms → Bacteria	1467	Open in IMG/M
3300005764\|Ga0066903_101281958	Not Available	1367	Open in IMG/M
3300005764\|Ga0066903_101712601	Not Available	1197	Open in IMG/M
3300006032\|Ga0066696_10346312	Not Available	968	Open in IMG/M
3300009012\|Ga0066710_102178607	Not Available	810	Open in IMG/M
3300009038\|Ga0099829_10008104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6632	Open in IMG/M
3300009038\|Ga0099829_10198283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1623	Open in IMG/M
3300009088\|Ga0099830_10195028	Not Available	1582	Open in IMG/M
3300009088\|Ga0099830_10247357	Not Available	1410	Open in IMG/M
3300009088\|Ga0099830_10530838	Not Available	962	Open in IMG/M
3300009088\|Ga0099830_10652770	Not Available	865	Open in IMG/M
3300009088\|Ga0099830_10859623	Not Available	749	Open in IMG/M
3300009088\|Ga0099830_11385790	Not Available	585	Open in IMG/M
3300009089\|Ga0099828_10039653	All Organisms → cellular organisms → Bacteria	3850	Open in IMG/M
3300009090\|Ga0099827_10009214	All Organisms → cellular organisms → Bacteria	6254	Open in IMG/M
3300009090\|Ga0099827_11109770	Not Available	687	Open in IMG/M
3300009137\|Ga0066709_100755887	Not Available	1404	Open in IMG/M
3300009792\|Ga0126374_11039527	Not Available	645	Open in IMG/M
3300009792\|Ga0126374_11826942	Not Available	509	Open in IMG/M
3300010043\|Ga0126380_12262779	Not Available	504	Open in IMG/M
3300010047\|Ga0126382_11225201	Not Available	674	Open in IMG/M
3300010047\|Ga0126382_12543554	Not Available	500	Open in IMG/M
3300010048\|Ga0126373_12989813	Not Available	527	Open in IMG/M
3300010154\|Ga0127503_11293367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	746	Open in IMG/M
3300010329\|Ga0134111_10453012	Not Available	557	Open in IMG/M
3300010335\|Ga0134063_10696195	Not Available	525	Open in IMG/M
3300010358\|Ga0126370_12469224	Not Available	517	Open in IMG/M
3300010359\|Ga0126376_12192482	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300010359\|Ga0126376_12779063	Not Available	539	Open in IMG/M
3300010361\|Ga0126378_10603668	Not Available	1212	Open in IMG/M
3300010361\|Ga0126378_12603947	Not Available	578	Open in IMG/M
3300010362\|Ga0126377_11620503	Not Available	722	Open in IMG/M
3300010366\|Ga0126379_13371725	Not Available	535	Open in IMG/M
3300010376\|Ga0126381_104420625	Not Available	543	Open in IMG/M
3300010398\|Ga0126383_11472016	Not Available	771	Open in IMG/M
3300010398\|Ga0126383_13196932	Not Available	535	Open in IMG/M
3300011269\|Ga0137392_10728750	Not Available	820	Open in IMG/M
3300011270\|Ga0137391_10093028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2607	Open in IMG/M
3300011270\|Ga0137391_10441803	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300011271\|Ga0137393_10203614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1670	Open in IMG/M
3300011271\|Ga0137393_10211724	All Organisms → cellular organisms → Bacteria	1638	Open in IMG/M
3300011271\|Ga0137393_10456844	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300011271\|Ga0137393_11643447	Not Available	532	Open in IMG/M
3300012189\|Ga0137388_10065120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3014	Open in IMG/M
3300012189\|Ga0137388_10184697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. UFLA03-84	1870	Open in IMG/M
3300012189\|Ga0137388_10556385	Not Available	1066	Open in IMG/M
3300012198\|Ga0137364_10034343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3264	Open in IMG/M
3300012198\|Ga0137364_10427928	Not Available	992	Open in IMG/M
3300012198\|Ga0137364_10562904	Not Available	858	Open in IMG/M
3300012198\|Ga0137364_10724573	Not Available	751	Open in IMG/M
3300012198\|Ga0137364_10943728	Not Available	653	Open in IMG/M
3300012198\|Ga0137364_11192027	Not Available	571	Open in IMG/M
3300012198\|Ga0137364_11195651	Not Available	570	Open in IMG/M
3300012199\|Ga0137383_10087262	All Organisms → cellular organisms → Bacteria	2258	Open in IMG/M
3300012199\|Ga0137383_10260555	Not Available	1270	Open in IMG/M
3300012199\|Ga0137383_10723173	Not Available	727	Open in IMG/M
3300012199\|Ga0137383_10961811	Not Available	623	Open in IMG/M
3300012199\|Ga0137383_11249646	Not Available	532	Open in IMG/M
3300012200\|Ga0137382_10305851	Not Available	1110	Open in IMG/M
3300012201\|Ga0137365_11066626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	583	Open in IMG/M
3300012202\|Ga0137363_10829376	Not Available	784	Open in IMG/M
3300012204\|Ga0137374_10121566	All Organisms → cellular organisms → Bacteria	2401	Open in IMG/M
3300012204\|Ga0137374_10504156	All Organisms → cellular organisms → Bacteria → Proteobacteria	939	Open in IMG/M
3300012205\|Ga0137362_10755400	Not Available	834	Open in IMG/M
3300012206\|Ga0137380_10472380	Not Available	1107	Open in IMG/M
3300012206\|Ga0137380_10695478	Not Available	883	Open in IMG/M
3300012206\|Ga0137380_10746378	Not Available	847	Open in IMG/M
3300012207\|Ga0137381_10654148	Not Available	914	Open in IMG/M
3300012207\|Ga0137381_11099741	Not Available	684	Open in IMG/M
3300012209\|Ga0137379_10083801	All Organisms → cellular organisms → Bacteria	3068	Open in IMG/M
3300012209\|Ga0137379_10530847	Not Available	1084	Open in IMG/M
3300012209\|Ga0137379_11038788	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300012209\|Ga0137379_11519175	Not Available	570	Open in IMG/M
3300012210\|Ga0137378_10334544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1408	Open in IMG/M
3300012210\|Ga0137378_10897816	Not Available	799	Open in IMG/M
3300012210\|Ga0137378_11397062	Not Available	614	Open in IMG/M
3300012210\|Ga0137378_11866320	Not Available	503	Open in IMG/M
3300012211\|Ga0137377_10038126	All Organisms → cellular organisms → Bacteria	4392	Open in IMG/M
3300012211\|Ga0137377_10059064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3564	Open in IMG/M
3300012211\|Ga0137377_10212198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1859	Open in IMG/M
3300012211\|Ga0137377_10220020	All Organisms → cellular organisms → Bacteria	1824	Open in IMG/M
3300012211\|Ga0137377_11913662	Not Available	510	Open in IMG/M
3300012349\|Ga0137387_10195073	Not Available	1453	Open in IMG/M
3300012349\|Ga0137387_10854596	Not Available	658	Open in IMG/M
3300012350\|Ga0137372_10024105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5656	Open in IMG/M
3300012350\|Ga0137372_10044641	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3964	Open in IMG/M
3300012350\|Ga0137372_10063017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3221	Open in IMG/M
3300012350\|Ga0137372_10185919	Not Available	1673	Open in IMG/M
3300012350\|Ga0137372_10361764	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300012350\|Ga0137372_10410516	Not Available	1023	Open in IMG/M
3300012350\|Ga0137372_10951119	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Prosthecochloris → Prosthecochloris vibrioformis	604	Open in IMG/M
3300012351\|Ga0137386_10352366	Not Available	1059	Open in IMG/M
3300012353\|Ga0137367_10675244	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300012354\|Ga0137366_10774051	Not Available	682	Open in IMG/M
3300012354\|Ga0137366_11226701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium archetypum	508	Open in IMG/M
3300012355\|Ga0137369_10667942	Not Available	717	Open in IMG/M
3300012356\|Ga0137371_10148863	Not Available	1834	Open in IMG/M
3300012356\|Ga0137371_10372246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1109	Open in IMG/M
3300012356\|Ga0137371_10557368	Not Available	882	Open in IMG/M
3300012356\|Ga0137371_10633058	Not Available	820	Open in IMG/M
3300012356\|Ga0137371_11194173	Not Available	568	Open in IMG/M
3300012357\|Ga0137384_10100908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2409	Open in IMG/M
3300012357\|Ga0137384_10749035	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	792	Open in IMG/M
3300012358\|Ga0137368_10193082	Not Available	1456	Open in IMG/M
3300012359\|Ga0137385_10260860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1498	Open in IMG/M
3300012360\|Ga0137375_11439046	Not Available	510	Open in IMG/M
3300012361\|Ga0137360_10386234	Not Available	1178	Open in IMG/M
3300012363\|Ga0137390_10670299	Not Available	1001	Open in IMG/M
3300012532\|Ga0137373_10405526	Not Available	1058	Open in IMG/M
3300012971\|Ga0126369_12195326	Not Available	639	Open in IMG/M
3300016357\|Ga0182032_10747617	Not Available	823	Open in IMG/M
3300016422\|Ga0182039_10875448	Not Available	801	Open in IMG/M
3300018431\|Ga0066655_10833078	Not Available	628	Open in IMG/M
3300018482\|Ga0066669_10237912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1429	Open in IMG/M
3300018482\|Ga0066669_12033451	Not Available	539	Open in IMG/M
3300021560\|Ga0126371_10401497	Not Available	1512	Open in IMG/M
3300025910\|Ga0207684_10939767	Not Available	725	Open in IMG/M
3300026551\|Ga0209648_10172928	All Organisms → cellular organisms → Bacteria	1681	Open in IMG/M
3300026551\|Ga0209648_10391998	Not Available	919	Open in IMG/M
3300027846\|Ga0209180_10006844	All Organisms → cellular organisms → Bacteria → Proteobacteria	5797	Open in IMG/M
3300027846\|Ga0209180_10009663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	4955	Open in IMG/M
3300027846\|Ga0209180_10021753	All Organisms → cellular organisms → Bacteria	3400	Open in IMG/M
3300027846\|Ga0209180_10032669	Not Available	2810	Open in IMG/M
3300027862\|Ga0209701_10109091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1722	Open in IMG/M
3300027862\|Ga0209701_10211545	Not Available	1151	Open in IMG/M
3300027875\|Ga0209283_10137999	All Organisms → cellular organisms → Bacteria	1613	Open in IMG/M
3300027875\|Ga0209283_10195757	Not Available	1343	Open in IMG/M
3300027875\|Ga0209283_10383919	Not Available	917	Open in IMG/M
3300031092\|Ga0308204_10352512	Not Available	507	Open in IMG/M
3300031668\|Ga0318542_10625718	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300031768\|Ga0318509_10655839	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300031833\|Ga0310917_11103737	Not Available	529	Open in IMG/M
3300031941\|Ga0310912_11386124	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300032076\|Ga0306924_10269774	All Organisms → cellular organisms → Bacteria	1954	Open in IMG/M
3300032261\|Ga0306920_102495369	Not Available	711	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.35%
Aquatic	Environmental → Aquatic	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.35%
Freshwater	Environmental → Aquatic → Freshwater	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.54%
Loam	Environmental → Terrestrial → Soil → Loam	9.80%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	74.51%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.31%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	60.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.23%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.31%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_106778562	3300004633	Tropical Forest Soil	RTGSPEGDAMDRRREYRAKAFELLSLAEGVHDAERRADMLRFAQMWMSLSKPMPDLRGAYELPPSRVTVKAA*
Ga0066395_108146191	3300004633	Tropical Forest Soil	MNRTNEYRAKAFELMSLAETVNDPERRADMLRYARMWMTLSEPLPDLPSAYELKRASH*
Ga0066680_105893131	3300005174	Soil	MNNRTNEYRAKGFELLSLAESTNDPERRADMLRFAKMWMSLSEPMPDLPSAYELPRRH*
Ga0066684_103431232	3300005179	Soil	MKAAANQYRAKAFEYLSLAECMNDPERRADILRFARMWMELAEPIEKARGAYELPRGR*
Ga0066388_1001014163	3300005332	Tropical Forest Soil	MDRRREYRAKAFELLSLAESVHDAEQRADMLRFAQMWMSLSGPVPDLRSAYELPPSRVTAKAP*
Ga0066388_1006107143	3300005332	Tropical Forest Soil	MNRTNEYRAKAFEFLSLAESVNDPERRADLVRFARMWMSLSEPLPDMRSAYELKRASH*
Ga0066388_1051860741	3300005332	Tropical Forest Soil	MDRTNEYRAKAFELLSLAESVNDPERRADMLRFAQMWMSLSEPLPDLRSAYELRRSH*
Ga0066388_1053549492	3300005332	Tropical Forest Soil	MNRTNEYRAKAFELLSLAESVNDPEQRADMLRFAQMWMSLSEPLPDLRSAYELPRNERQAQKRPTTRLASRDTRKHMRKLRLR*
Ga0070708_1002184862	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MNRNNEYRAKAFELLSLAEAVNDPERRADMVRYARMWMNLSEPMPDLPSAYELPRSRVSKAA*
Ga0066661_105823082	3300005554	Soil	MNRTNEYRAKGFELLSLAESMNDPERRADMLRYARMWMSLSEPMPDLPSAYELPRRH*
Ga0066707_106235822	3300005556	Soil	MNRTNEYRAKGFELLSLAESMNDPERRADMLRYARMWMSLSEPMPDLPSAYELPRRH
Ga0066707_108619032	3300005556	Soil	MNNRTNEYRAKGFELLSLAESTNDPERRADMLRFARMWMSLSEPMPDLPSAYELPRRH*
Ga0066691_108045592	3300005586	Soil	MNRPNEYRAKGFELLSLAESMNDPERRADMLRYARMWMSLSEPMPDLPSAYELPRRH*
Ga0066706_104903751	3300005598	Soil	RGAVNRTNEYRAKGFELLSLAESMNDPERRADMLRYARMWMSLSEPMPDLPSAYELKPAPH*
Ga0066905_1013579022	3300005713	Tropical Forest Soil	MDHANEYRAKAFELLSMAESVNDPERRADMLRYAQMWMNLSKPMPDLPSAYELKRASH*
Ga0066905_1023218701	3300005713	Tropical Forest Soil	MNRANEYRAKAFELLSLAETVNDPERRADMLRFAQMWMSLSEPLPDLRSAYELHRSH*
Ga0066903_1003179451	3300005764	Tropical Forest Soil	MNRTNEYRAKAFELLSLAESVNDPEQRADMLRFAQMWMSLSEPLPDLRSAYELPRNERQAQKRPTTRL
Ga0066903_1009010692	3300005764	Tropical Forest Soil	MDRRREYRAKAFELLSLAEGVHDAERRADMLRFAQMWMSLSKPMPDLRGAYELPPSRVTVKAA*
Ga0066903_1010959793	3300005764	Tropical Forest Soil	VDRINEYRAKAFELLSLTESVNDPERRADMLRFAQMWMSLSKPLPDLRSAYELPPLAPGSESTNSFFRPPAPTRRTLAG*
Ga0066903_1012819582	3300005764	Tropical Forest Soil	MDRAKEYRAKAFELLSLAETVNDPEQRADMLRFAHMWMSLSEPLPNLRSAYELSRSH*
Ga0066903_1017126012	3300005764	Tropical Forest Soil	MNRTNEYRAKAFEFLSLAEMVNDPERRGDLLRFARMWMSLSEPLPDMRSAYEVKRASH*
Ga0066696_103463121	3300006032	Soil	MNRTNEYRAKAFEFLSLAETVNDPERRADMLRFAHMWMSLSEPMPDLPSAYELPRSRVSAKAA*
Ga0066710_1021786071	3300009012	Grasslands Soil	MNPTNEYRAKAFELLSLAECMNDPEKRADMLRFARIWMTLAEPIDQIRGAYEPPRPR
Ga0099829_100081048	3300009038	Vadose Zone Soil	MNRTNEYRAKGFELLSLAESMNDPERRADMLRYARMWMSLSEPMPDLPSGYELPRSRVSKAA*
Ga0099829_101982831	3300009038	Vadose Zone Soil	TPERGAMNRTNEYRAKGFELLSLAESMNDPERRADMLRYARMWMSLSEPMPDLPSAYELKPAPH*
Ga0099830_101950284	3300009088	Vadose Zone Soil	GAMNRTNEYRAKGFELLSLAESMNDPERRADMLRYARMWMSLSEPMPDLPSAYELKPAPH
Ga0099830_102473573	3300009088	Vadose Zone Soil	MNRTNEYRAKGFELLSLAESMNDPERRADMLRYARMWMSLSEPMPDLPSAYELKPAPH*
Ga0099830_105308382	3300009088	Vadose Zone Soil	MNNRTNEYRAKGFELLSLAESTNDPERRADMLRFARMWMSLSEPLPDLPSAYELPRSRH*
Ga0099830_106527701	3300009088	Vadose Zone Soil	MNRTNEYRAKGFELLSLAESMNDPERRADMLRYARMWMSLSEPMPDLLSAYELPRSRASAKAA*
Ga0099830_108596231	3300009088	Vadose Zone Soil	MNRINENEYRAKGFELLSLAETVNDPERRADMLRYARMWMSLSEPMSDLPSAYELPRRRRL*
Ga0099830_113857902	3300009088	Vadose Zone Soil	MNRTNEYRAKGFELLSLAETMNDPERRADMLRFAKMWMSLSEPMPDLPSAYELPRSRH*
Ga0099828_100396532	3300009089	Vadose Zone Soil	MNRTNEYRAKGFELLSLAESMNDPERRADMLRYARMWMNLSEPMPDLPSAYELPRSRVSKAA*
Ga0099827_100092147	3300009090	Vadose Zone Soil	MNRTNEYRAKGFELLSLAESMNDPERRADMLRCARMWMSLSEPMPDLPSGYELPRSRVSKAA*
Ga0099827_111097701	3300009090	Vadose Zone Soil	MNRPNEYRAKGFELLSLAESTNDPERRADMLRYARMWMSLSEPLPDLPSAYELPRSRH*
Ga0066709_1007558871	3300009137	Grasslands Soil	VNRTNEYRAKGFELLSLAESMNDPERRADMLRYARMWMSLSEPMPDLPSAYELKPAPH*
Ga0126374_110395271	3300009792	Tropical Forest Soil	MNRTNEYRAKAFELMSLAETVNDPERRANMLRYARMWMTLSEPLPDLPSAYELKRASH*
Ga0126374_118269421	3300009792	Tropical Forest Soil	EYRAKAFELLSLAETVNDPERRAEMLRYAHMWMSLSKPLPDLPSAYELRRSH*
Ga0126380_122627791	3300010043	Tropical Forest Soil	MDRTNEYRAKAFELLSLAESVNDPERRADMLRYARVWMSLSKPMPDLPSAYELKRASH*
Ga0126382_112252011	3300010047	Tropical Forest Soil	MDSTNEYRAKAFELLSLAESVNDPERRADMLRFAQMWMSLSKPPPDLPGAYELPKRRK*
Ga0126382_125435542	3300010047	Tropical Forest Soil	NEYRAKAFELLSLAESVNDPEWRADMLRYAQMWMNLSKPMPDLPSAYELKRASH*
Ga0126373_129898131	3300010048	Tropical Forest Soil	MNRTHEYRAKAFEFLSLAESVNDPERRADLVRFARMWMSLSEPLPDMRSAYELKRASH*
Ga0127503_112933672	3300010154	Soil	MNRSNGYRAKAFELLSLAESVNDLEGRADLLRFARHWMSLSEPMPNLPSAYEFPRANAA*
Ga0134111_104530121	3300010329	Grasslands Soil	GQATPARDAMERTNEYRAKAFELLSRAERVNDPEQRADMLRFAHMWMSLSEPMPDLPSAFELPRARVSAKAA*
Ga0134063_106961951	3300010335	Grasslands Soil	MNRTNEYQAKAFEFLSLAETVNDPERRADMLRFAHMWMSLSEPMPDLPSAYELPRSRVSAKAA*
Ga0126370_124692242	3300010358	Tropical Forest Soil	MNRTNEYRAKAFEFLSLAESVNDPERRADLVRFARMWMSLSEPLPDMRSAYE
Ga0126376_121924821	3300010359	Tropical Forest Soil	MDRRREYRAKAFELLSLAEGVHDAERRADMLRFAQMWMSLSGPMPDLRGAYELPPSRVTVKAA*
Ga0126376_127790632	3300010359	Tropical Forest Soil	MDRTNEYRAKAFELLSLAESVNHPERRADMLRYAQMWMNLSKPMANLPSAYELKRASH*
Ga0126378_106036683	3300010361	Tropical Forest Soil	MNRTNEYRAKAFEFLSLAESVNDPERRADLVRFARMWMSLSEPLPDMRSAYKLKRASH*
Ga0126378_126039471	3300010361	Tropical Forest Soil	MNRANEYRAKAFELLSLAETVNDPERRADMLRFAQMWMSLSEPLPDLRSAYELPRSPRQRSTNSFF*
Ga0126377_116205031	3300010362	Tropical Forest Soil	RAKAFELMSLAETVNDPERRADMLRYARMWMTLSEPLPDLPSAYELKRASH*
Ga0126379_133717251	3300010366	Tropical Forest Soil	MDRAKEYRAKAFELLSLAETVNDPEQRADMLRFAHMWMSLSEPLPDLRSAYELRRSH*
Ga0126381_1044206252	3300010376	Tropical Forest Soil	MDRANEYRAKAFELLSLAESANDPERRADMLRFAQMWMSLSEPLPDLRSAYELHRSH*
Ga0126383_114720161	3300010398	Tropical Forest Soil	MDRTNEYRAKAFELLSLAESVNDPERRADMLRFAQMWMSLSKPPPDLPGAYELPKRRK*
Ga0126383_131969321	3300010398	Tropical Forest Soil	MNRTHEYRAKAFELLSLAETVNDPEQRADMLRFARMWMSLSEPLPDLRSAHELHRSH*
Ga0137392_107287502	3300011269	Vadose Zone Soil	YRAKGFELLSLAESMNDPERRADMLRYARMWMSLSEPMPDLPSAYELKPAPH*
Ga0137391_100930284	3300011270	Vadose Zone Soil	MAAADGYRAKAFECLSLAENMNDPERRADMLRFAKIWMNLSEPMNELAGAYELPHRR*
Ga0137391_104418032	3300011270	Vadose Zone Soil	AMNRPNEYRAKGFELLSLAESMNDPERRADMLRFARMWMSLSEPMPDLPSAYELPRRH*
Ga0137393_102036143	3300011271	Vadose Zone Soil	VNRTNEYRAKGCELLSLAETMNDPERRADMLRYARMWMSLSEPMPDLPSAYELKPVSL*
Ga0137393_102117242	3300011271	Vadose Zone Soil	MNNRTNEYRAKGFELLSLAESTNDPERRADMLRFARMWMSLSEPLPDLPSAYELLRSRH*
Ga0137393_104568442	3300011271	Vadose Zone Soil	MNNRTNEYRAKGFELLSLAESMNDPERRADILRYARLWMSLSEPIPDLPLRLPYELPPQPRALQP*
Ga0137393_116434471	3300011271	Vadose Zone Soil	MNRTNEYRAKAYEFLSLAESVNDPERRADMLRYARMWMSLSEPMPDLTYAYELKPAPH*
Ga0137388_100651203	3300012189	Vadose Zone Soil	MNRTNEYRAKGFELLSLAESTIDPERRADMLRYARMWMSLSEPMPDLPSAYELKPAPH*
Ga0137388_101846971	3300012189	Vadose Zone Soil	VNRTNEYRAKRCELLSLAETMNDPERRADMLRYARMWISLSEPKPERPPAYQIKPSSH
Ga0137388_105563852	3300012189	Vadose Zone Soil	MNRTNEYRAKGFELLSLAETVNDPERRADMLRYARMWMSLSEPMPDDLPSAYELPRSRASKAA*
Ga0137364_100343437	3300012198	Vadose Zone Soil	MERTNEYRAKAFELLSRAESVNDPEQRADMLRFAHMWMSLSEPMPDLPSAFELPRARVSAKAA*
Ga0137364_104279281	3300012198	Vadose Zone Soil	MNRCNAYQVKAFELLSLAESVNDPERRADLLRFARHWMSLSEPMLNLPSAYEFPRANAA*
Ga0137364_105629041	3300012198	Vadose Zone Soil	QSGGAMNNRTNEYRAKGFELLSLAESTNDPERRADMLRFARMWMSLSEPMPDLPSAYKLPRRH*
Ga0137364_107245731	3300012198	Vadose Zone Soil	RTNEYRAKGFELLSLAESMNDPERRADMLRYARMWMSLSEPMPDLPSAYELKPAPH*
Ga0137364_109437281	3300012198	Vadose Zone Soil	MNRSNGYRARAFELLSLAEGENDPERRADLLRFARHWMSLTEPMSLSEPMPNLPSAYEF*
Ga0137364_111920271	3300012198	Vadose Zone Soil	MNRINENEYRAKGFELLSLAETVNDPERRADMLRYARMWMSLSEPLPDLPSAYELPRRH*
Ga0137364_111956512	3300012198	Vadose Zone Soil	MNRTNGYRAKGYGFLSLAETVNDPERRADMLRYARMWMSLSEPMPDLPSAYELPRRH*
Ga0137383_100872624	3300012199	Vadose Zone Soil	MNGTHEYRAKAFELLSQAETVNDAERRADMLRYARMWMSLSEPMPDLPSAYELSRSRH*
Ga0137383_102605554	3300012199	Vadose Zone Soil	MNRTNEYRAKGYEILSLAETMNDPERRADMLRYARMWMSLSEPMSDLPSAYELPRSRH*
Ga0137383_107231732	3300012199	Vadose Zone Soil	EYRAKGFELLSLAESMNDPERRADMLRYARMWMSLSEPMPDLPSAYELKPAPH*
Ga0137383_109618111	3300012199	Vadose Zone Soil	MNRPNEYRAKGFELLSLAESTNDPERRADMLRFARMWMSLSEPLPDLPSAYELPRRH*
Ga0137383_112496461	3300012199	Vadose Zone Soil	AKGFELLSLAESTNDPERRADMLRFARMWMSLSEPMPDLPSAYELPRRH*
Ga0137382_103058511	3300012200	Vadose Zone Soil	MNRSNAYQAKAFELLSLAESVNDLERRADLLRFARHWMSLSEPMPNLPSAYEFVRAKAA*
Ga0137365_110666261	3300012201	Vadose Zone Soil	TNEYRAKGFELLSLAVNDPQRRADMLRFAHMWMSLSEPMPDVPSAYELPRSRSSVKAA*
Ga0137363_108293761	3300012202	Vadose Zone Soil	MNRTNEYRAKGFELLSLAETMNDPERRADMLRYARMWMSLSEPMPDLLSAYELPRSRASAKAA*
Ga0137374_101215665	3300012204	Vadose Zone Soil	MDRTNEYRAKGYEFLSLAETVNDPERRADMLRYARMWMNLSEPMPDLPSAYELPRRH*
Ga0137374_105041561	3300012204	Vadose Zone Soil	MNRNNEYRAKGFELLSLAETVNDPERRADMLRYARMWMNLSEPVPDLPSAYELPRRH*
Ga0137362_107554002	3300012205	Vadose Zone Soil	MNRSNAYQAKAFELLSLAESVNDPERRADLLRFARHWMSLSEPMPNLPSAYEFPRANAA*
Ga0137380_104723801	3300012206	Vadose Zone Soil	MNRTNEYRAKGFELLSLAESMNDPERRADMLRYARMWMSLSEPMPDLPSTYELPRSRASAKAA*
Ga0137380_106954781	3300012206	Vadose Zone Soil	MNRNNEYRAKGFELLSLAETVNDPERRADMLRYARMWMNLSEPMPDLPSAY
Ga0137380_107463781	3300012206	Vadose Zone Soil	MNRTNEYRAKGYEILSLAETMNDPERRADMLRYARMWMSLSEPMSDLPTAYELPRSRH*
Ga0137381_106541481	3300012207	Vadose Zone Soil	MNRTNEYRAKGYEILSLAETMNDPERRADMLRYARMWMSLSEPISDLPTAYELPRSRH*
Ga0137381_110997412	3300012207	Vadose Zone Soil	MNRTNEYRAKGFELLSLAETMNDPERRADMLRYARMWMSLSEPMPDLPSAYELPRSRH*
Ga0137379_100838016	3300012209	Vadose Zone Soil	MNRTNEYRAKGFELLSLAETMNEPERRADMLRYARMWMSLSEPMPDLPSAY*
Ga0137379_105308472	3300012209	Vadose Zone Soil	MNRTNEYRAKGFELLSLAESMNDPERRADMLRYARMWMSLSEPMPDLPSTYELPRSRASAKAA
Ga0137379_110387882	3300012209	Vadose Zone Soil	MERTNEYRAKAFELLSRAERVNDPEQRADMLRFAHMWMSLSEPMPDLPSAFELPRARVSA
Ga0137379_115191751	3300012209	Vadose Zone Soil	NRTNEYRAKGFELLSLAESTNDPERRADMLRFARMWMSLSEPMPDLPSAYELPRRH*
Ga0137378_103345444	3300012210	Vadose Zone Soil	AMNRTNEYRAKGFELLSLAESMNDPERRADMLRYARMWMSLSERMPDLPSAYELKPAPH*
Ga0137378_108978161	3300012210	Vadose Zone Soil	MNRNNEYRAKGFELLSLAETVNDPERRADMLRYARMWMNLSEPVPDLPSAYELPRGH*
Ga0137378_113970621	3300012210	Vadose Zone Soil	MDRTNEYRAKAFELLSRAESVNDPEQRADMLRFAHMWMSLSEPMPDLPSAFELPRARVSAKAA
Ga0137378_118663202	3300012210	Vadose Zone Soil	AMNNRTNEYRAKGFELLSLAESTNDPERRADMLRFARMWMSLSEPMPDLPSAYELPRRH*
Ga0137377_100381263	3300012211	Vadose Zone Soil	MNRTNEYRAKGFELLSLAETMNDPERRADMLRYARMWMSLSEPLPDLPSAYELPRSRH*
Ga0137377_100590645	3300012211	Vadose Zone Soil	MKRLNEYRAKAFELLSRAESVNDPEQRADMLRFAHMWMSLSEPMPDLPSAFELPRARVSAKAA*
Ga0137377_102121981	3300012211	Vadose Zone Soil	RAKGFELLSLAETVNDPERRADMLRYARMWMNLSEPMPDLPSAYELPRRH*
Ga0137377_102200204	3300012211	Vadose Zone Soil	GAMNNRTNEYRAKGFELLSLAESTNDPERRADMLRFARMWMSLSEPLPDLPSAYELPRSRH*
Ga0137377_119136621	3300012211	Vadose Zone Soil	YRAKGFELLSLAETVNDPERRADMLRYARMWMNLSEPVPDLPSAYELPRGH*
Ga0137387_101950734	3300012349	Vadose Zone Soil	MERTNEYRAKAFELLSRAERVNDPEQRADMLRFAHMWMSLSEPMPDLPSAFELPRARVSAKAA*
Ga0137387_108545962	3300012349	Vadose Zone Soil	MNRTNEYRAKAYEFLSLAENLNDPERRADVLRYARMWMSLSEPMPDLPSAYELPRSRH*
Ga0137372_1002410510	3300012350	Vadose Zone Soil	MGRTNEYRAKAFELLSLAETVNDLERRVDMLRFAKMWMSLSEPMSDLPSAYELLRSRVSARAT*
Ga0137372_100446416	3300012350	Vadose Zone Soil	MNRTNEYRAKGYEILSLAETMNDPERRADMLRYARMWMSLSEPMPDLPSAYELPRSRH*
Ga0137372_100630171	3300012350	Vadose Zone Soil	MNRTNEYRAKAYEFLSLAESVNDPERRADMLRYARMWMNLSEPMPDLPSAYELPRSRVSKAA*
Ga0137372_101859193	3300012350	Vadose Zone Soil	VNRTNEYRAKGYEFLSLAETVNDPERRADMLRFAKMWMSLSEPMPDLPSAYELPRRH*
Ga0137372_103617641	3300012350	Vadose Zone Soil	ATPEGGAMNRTHEYRAKAFELLSLAETVNDAERRADMLRFARMWISLSEPMPDLPSANA*
Ga0137372_104105161	3300012350	Vadose Zone Soil	MDRTNEYRAKGYEFLSLAENVNDPERRADMLRYARMWMNLSEPMPDLPSAYELPRRH
Ga0137372_109511191	3300012350	Vadose Zone Soil	MNRINEYRAKGFELLSLAETVNDPARRADMLRFARMWMSLSEPMPDLPSAYELPP*
Ga0137386_103523661	3300012351	Vadose Zone Soil	MNRTNEYRAKGFELLSLAESVNDPERRADMLRYARMWMSLSEPMPDLPSAYELKPAPH*
Ga0137367_106752441	3300012353	Vadose Zone Soil	SGGAMNRNNEYRAKGFELLSLAETMNDPERRADMLRYARMWMNLSEPMPDLPSAYQLPPRRSAR*
Ga0137366_107740511	3300012354	Vadose Zone Soil	RGAMNRTNEYRAKGFELLSLAETMNDPERRADMLRYARMWMSLSEPMPDLPSTYELPRSRASAKAA*
Ga0137366_112267011	3300012354	Vadose Zone Soil	MNRTNEYRAKGFELLSLAESMNDPERRADMLRYARMWMSLSERMPDLPSAYELKPAPH*
Ga0137369_106679421	3300012355	Vadose Zone Soil	VRTGNPERGDAMNRTNEYRAKGYEILSLAETMNDPERRADMLRYARMWMSLSEPMPDLPSAYELPRSRH*
Ga0137371_101488631	3300012356	Vadose Zone Soil	PERGAMNRTNEYRAKGFELLSLAESMNDPERRADMLRYARMWMSLSEPMPDLPSAYELKPAPH*
Ga0137371_103722464	3300012356	Vadose Zone Soil	EYRAKGFELLSLAETVNDPERRADMLRYARMWMNLSEPVPDLPSAYELPRGH*
Ga0137371_105573682	3300012356	Vadose Zone Soil	MNRNNEYQAKGFELLSLAETVNDPERWADMLRYARMWMNLSEPMPDLPSAYQLPRRH*
Ga0137371_106330581	3300012356	Vadose Zone Soil	NEYRAKGFELLSLAESTNDPERRADMLRFARMWMSLSEPMPDLPSAYELPRRH*
Ga0137371_111941731	3300012356	Vadose Zone Soil	AMNRNNEYRAKGFELLSLAETVNDPERRADMLRYARMWMNLSEPVPDLPSAYELPRGH*
Ga0137384_101009085	3300012357	Vadose Zone Soil	MNRNNEYRAKGFELLSLAETVNDPERRADMLRYARMWMNLSEPMPDLPSAYELPRRH*
Ga0137384_107490351	3300012357	Vadose Zone Soil	MNRINENEYRAKGFELLSLAETVNDPERRADMLRYARMWMSLSEPMPDLPSAYELKPAPH
Ga0137368_101930823	3300012358	Vadose Zone Soil	MNRTNEYRAKGCEFLSLAETVNDPERRADMLRYARMWMSLSEPMPDLPSAYELSRRH*
Ga0137385_102608601	3300012359	Vadose Zone Soil	MNRNNEYRAKGFELLSLAESVNDPERRADMLRYARMWMNLSEPMPDLP
Ga0137375_114390461	3300012360	Vadose Zone Soil	MNRTNEYRAKGYEILSLAETMNDPERRADMLRYARMWMSLSEPMSDLPSAYE
Ga0137360_103862342	3300012361	Vadose Zone Soil	MNRSNEYRAKAFELVSLAESVNDPERRADMLRFARHWMSLSEPMPNLPSAYEFPRAKAA*
Ga0137390_106702992	3300012363	Vadose Zone Soil	YRAKGFELLSLAESMNDPERRADMLRYARMWMSLSEPMPDLLSAYELPRSRASAKAA*
Ga0137373_104055262	3300012532	Vadose Zone Soil	MDRTNEYRAKGYEFLSLAETVNDPERRADMLRYARMWMNLSEPMPELPSAYELPRRH*
Ga0126369_121953261	3300012971	Tropical Forest Soil	MNRTNEYRAKAFELLSLAESVNDPEQRADMLRFAQMWMSLSEPLPDLRSAYELPRSPRQRSTNSFF*
Ga0182032_107476172	3300016357	Soil	FCARGQATLVRGAVDRTNEYRAKAFELLSLAETVNDPERRADMLRFAQMWMSLSKPPPDVSSAYELPRAKAA
Ga0182039_108754481	3300016422	Soil	MERTHEYRAKAFELISLAETVNDPERRADMLRFARMWMSLSEPLPDLRSAYELRRSH
Ga0066655_108330782	3300018431	Grasslands Soil	MNRTNEYRAKGFELLSLAESMNDPPRRADALRYARLRISLTEPIPDLPLRLPYELPPQPRIPTRP
Ga0066669_102379123	3300018482	Grasslands Soil	MKAAANEYRAKAFEYLSLAECMNDPERRADILRFARMWMELAEPIEKARGAYELPRGR
Ga0066669_120334511	3300018482	Grasslands Soil	MNRTNEYRAKAFELLSLAESVNDPERRADMLRFARMWMSFSEPMPDLPSAYELKPGTRKRAA
Ga0126371_104014971	3300021560	Tropical Forest Soil	MNRTNEYRAKAFELMSLAETVNDPERRADMLRYARMWMTLSEPLPDLPSAYELKRASH
Ga0207684_109397671	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MNRNNEYRAKAFELLSLAEAVNDPERRADMVRYARMWMNLSEPMPDLPSAYDLPRSRVSKAA
Ga0209648_101729282	3300026551	Grasslands Soil	MNNRTNEYRAKGFELLSLAESTNDPERRADMLRFARMWMSLSEPLPDLPSAYELLRSRH
Ga0209648_103919982	3300026551	Grasslands Soil	MNRTNEYRAKGFELLSLAESVNDPERRADMLRYARMWMSLSEPMPDLPSAYELKPAPH
Ga0209180_1000684412	3300027846	Vadose Zone Soil	MNRTNEYRAKGFELLSLAESMNDPERRADMLRYARMWMSLSEPMPDLLSAYELPRSRASAKAA
Ga0209180_100096632	3300027846	Vadose Zone Soil	MNNRTNEYRAKGFELLSLAESTNDPERRADMLRFARMWMSLSEPMPDLPSAYELPRRH
Ga0209180_100217531	3300027846	Vadose Zone Soil	MNRTNEYRAKGFELLSLAESMNDPERRADMLRYARMWMSLSEPMPDLPSGYELPRSRVSKAA
Ga0209180_100326693	3300027846	Vadose Zone Soil	MNNRTNEYRAKGFELLSLAESTNDPERRADMLRFARMWMSLSEPLPDLPSAYELPRSRH
Ga0209701_101090914	3300027862	Vadose Zone Soil	MNRTNEYRAKGFELLSLAESMNDPERRADMLRYARMWMSLSEPMPDLPSAYELKPAPH
Ga0209701_102115453	3300027862	Vadose Zone Soil	MNRINENEYRAKGFELLSLAETVNDPERRADMLRYARMWMSLSEPMSDLPSAYELPRRRR
Ga0209283_101379995	3300027875	Vadose Zone Soil	ENEYRAKGFELLSLAETVNDPERRADMLRYARMWMSLSEPMSDLPSAYELPRRRRL
Ga0209283_101957575	3300027875	Vadose Zone Soil	RGAMNRTNEYRAKGFELLSLAESMNDPERRADMLRYARMWMNLSEPMPDLPSAYELPRSRVSKAA
Ga0209283_103839191	3300027875	Vadose Zone Soil	MNRTNEYRAKGFELLSLAESMNDPERRADMLRYARMWMSLSEPMPDLPSAY
Ga0308204_103525121	3300031092	Soil	MNRSNAYRAKAFELLSLAESVNDPEARADMLRFARHWMSLSEPMPNLPSAYEFPRAKAA
Ga0318542_106257181	3300031668	Soil	MERTHEYRAKAFELLSLAETVNDPERRGDMLRFARMWMSLSKPLPDLRSAYE
Ga0318509_106558391	3300031768	Soil	MDRRREYRAKAFELLSLAESVHDAEQRADMLRFAQMWMSLSGPVPDLRSAYELPPSRVTAKAP
Ga0310917_111037371	3300031833	Soil	VDRTNEYRAKAFELLSLAETVNDPERRADMLRFAQMWMSLSKPPPDVSSAYELPRAKAA
Ga0310912_113861241	3300031941	Soil	EYRAKAFELLSLAESVHDAEQRADMLRFAQMWMSLSGPVPDLRSAYELPPSRVTAKAP
Ga0306924_102697744	3300032076	Soil	TLVRRAVDRTNEYRAKAFELLSLAETVNDPERRADMLRFAQMWMSLSKPPPDVSSAYELPRAKAA
Ga0306920_1024953691	3300032261	Soil	MERTHEYRAKAFELLSLAETVNDPERRADMLRFARMWMSLSEPLPDLRSAYELRRSH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F044886

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences