Metagenome / Metatranscriptome Family F044999

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F044999
Family Type	Metagenome / Metatranscriptome
Number of Sequences	153
Average Sequence Length	44 residues
Representative Sequence	RGFRVVAHFIGGKLSKTAQTIPDWAAKVFGKELHAAKQHEKPGRGR
Number of Associated Samples	100
Number of Associated Scaffolds	153

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	95.42 %
% of genes from short scaffolds (< 2000 bps)	83.66 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.196 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (59.477 % of family members)
Environment Ontology (ENVO)	Unclassified (56.863 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (60.131 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.46% β-sheet: 24.32% Coil/Unstructured: 66.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 153 Family Scaffolds
PF13338	AbiEi_4	14.38
PF08843	AbiEii	6.54
PF12728	HTH_17	3.27
PF12770	CHAT	1.96
PF02661	Fic	1.96
PF09364	XFP_N	1.31
PF06296	RelE	1.31
PF00436	SSB	1.31
PF02899	Phage_int_SAM_1	1.31
PF06114	Peptidase_M78	1.31
PF10544	T5orf172	0.65
PF01292	Ni_hydr_CYTB	0.65
PF13426	PAS_9	0.65
PF04542	Sigma70_r2	0.65
PF00486	Trans_reg_C	0.65
PF02628	COX15-CtaA	0.65
PF00589	Phage_integrase	0.65
PF02195	ParBc	0.65
PF13517	FG-GAP_3	0.65
PF00239	Resolvase	0.65
PF13181	TPR_8	0.65
PF09424	YqeY	0.65
PF01977	UbiD	0.65
PF04116	FA_hydroxylase	0.65
PF12281	NTP_transf_8	0.65
PF01370	Epimerase	0.65
PF13365	Trypsin_2	0.65

COG ID	Name	Functional Category	% Frequency in 153 Family Scaffolds
COG2253	Predicted nucleotidyltransferase component of viral defense system	Defense mechanisms [V]	6.54
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	1.31
COG4737	Uncharacterized conserved protein	Function unknown [S]	1.31
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	1.31
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	1.31
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	1.31
COG1969	Ni,Fe-hydrogenase I cytochrome b subunit	Energy production and conversion [C]	0.65
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.65
COG2864	Cytochrome b subunit of formate dehydrogenase	Energy production and conversion [C]	0.65
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	0.65
COG3038	Cytochrome b561	Energy production and conversion [C]	0.65
COG3658	Cytochrome b subunit of Ni2+-dependent hydrogenase	Energy production and conversion [C]	0.65
COG4117	Thiosulfate reductase cytochrome b subunit	Inorganic ion transport and metabolism [P]	0.65
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.65
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	0.65
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.65
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.65
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.65
COG1612	Heme A synthase	Coenzyme transport and metabolism [H]	0.65
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.20 %
Unclassified	root	N/A	9.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.20 %
Unclassified	root	N/A	9.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.20 %
Unclassified	root	N/A	9.80 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	47.06 %
Unclassified	root	N/A	9.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.61 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.31 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.31 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	10.46 %
Unclassified	root	N/A	9.80 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.61 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.65 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.65 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.65 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.65 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.65 %
Chlamydiae	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae	0.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.46 %
Unclassified	root	N/A	9.80 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.96 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.65 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.65 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.65 %
Chlamydiia	class	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae → Chlamydiia	0.65 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.65 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.46 %
Unclassified	root	N/A	9.80 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.96 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.65 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.65 %
Chlamydiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae → Chlamydiia → Chlamydiales	0.65 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.65 %
Pseudanabaenales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales	0.65 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.46 %
Unclassified	root	N/A	9.80 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.96 %
Leptolyngbyaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae	0.65 %
Iamiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae	0.65 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.65 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.65 %
Chlamydiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae → Chlamydiia → Chlamydiales	0.65 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.46 %
Unclassified	root	N/A	9.80 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.96 %
Sandaracinaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae	0.65 %
Leptolyngbya	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya	0.65 %
Iamia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Iamia	0.65 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.65 %
Chlamydiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae → Chlamydiia → Chlamydiales	0.65 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.46 %
Unclassified	root	N/A	9.80 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.96 %
Sandaracinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus	0.65 %
Leptolyngbya ohadii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya → Leptolyngbya ohadii	0.65 %
unclassified Iamia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Iamia → unclassified Iamia	0.65 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.65 %
Chlamydiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae → Chlamydiia → Chlamydiales	0.65 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.46 %
Unclassified	root	N/A	9.80 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.96 %
Sandaracinus amylolyticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus → Sandaracinus amylolyticus	0.65 %
Iamia sp. SCSIO 61187	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Iamia → unclassified Iamia → Iamia sp. SCSIO 61187	0.65 %
Leptolyngbya ohadii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya → Leptolyngbya ohadii	0.65 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.65 %
Chlamydiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae → Chlamydiia → Chlamydiales	0.65 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10166630	All Organisms → cellular organisms → Bacteria	1492	Open in IMG/M
3300002245\|JGIcombinedJ26739_100100493	All Organisms → cellular organisms → Bacteria	2707	Open in IMG/M
3300002245\|JGIcombinedJ26739_101636980	All Organisms → cellular organisms → Bacteria → Acidobacteria	542	Open in IMG/M
3300002910\|JGI25615J43890_1097759	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300002914\|JGI25617J43924_10008238	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3317	Open in IMG/M
3300005176\|Ga0066679_10983715	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300005538\|Ga0070731_10924668	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300005602\|Ga0070762_10028507	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus → Sandaracinus amylolyticus	2967	Open in IMG/M
3300005841\|Ga0068863_102744461	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300006796\|Ga0066665_11688551	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300007255\|Ga0099791_10046377	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae → Chlamydiia → Chlamydiales	1939	Open in IMG/M
3300007258\|Ga0099793_10261493	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300007258\|Ga0099793_10266887	All Organisms → cellular organisms → Bacteria → Acidobacteria	828	Open in IMG/M
3300007265\|Ga0099794_10114516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya → Leptolyngbya ohadii	1353	Open in IMG/M
3300007265\|Ga0099794_10404612	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300007788\|Ga0099795_10075540	All Organisms → cellular organisms → Bacteria → Acidobacteria	1279	Open in IMG/M
3300009038\|Ga0099829_10041615	All Organisms → cellular organisms → Bacteria	3350	Open in IMG/M
3300009038\|Ga0099829_10575125	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300009038\|Ga0099829_11094759	Not Available	660	Open in IMG/M
3300009038\|Ga0099829_11192746	All Organisms → cellular organisms → Bacteria → Acidobacteria	630	Open in IMG/M
3300009038\|Ga0099829_11560674	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300009088\|Ga0099830_10977504	All Organisms → cellular organisms → Bacteria → Acidobacteria	701	Open in IMG/M
3300009088\|Ga0099830_11265411	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300009089\|Ga0099828_10472729	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300009089\|Ga0099828_10646860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	951	Open in IMG/M
3300009090\|Ga0099827_10510186	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300009090\|Ga0099827_11554274	Not Available	576	Open in IMG/M
3300009090\|Ga0099827_11805147	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300009090\|Ga0099827_11815405	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300009137\|Ga0066709_101617389	All Organisms → cellular organisms → Bacteria → Acidobacteria	926	Open in IMG/M
3300009137\|Ga0066709_102261725	Not Available	747	Open in IMG/M
3300009143\|Ga0099792_10824169	Not Available	609	Open in IMG/M
3300009525\|Ga0116220_10415112	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300010304\|Ga0134088_10558555	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300010341\|Ga0074045_10361069	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300010343\|Ga0074044_10931855	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300010379\|Ga0136449_103805307	All Organisms → cellular organisms → Bacteria → Acidobacteria	568	Open in IMG/M
3300011120\|Ga0150983_10688347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Iamia → unclassified Iamia → Iamia sp. SCSIO 61187	692	Open in IMG/M
3300011269\|Ga0137392_11585707	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300011270\|Ga0137391_10042374	All Organisms → cellular organisms → Bacteria → Acidobacteria	3860	Open in IMG/M
3300011270\|Ga0137391_10774024	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300011271\|Ga0137393_10125120	All Organisms → cellular organisms → Bacteria	2125	Open in IMG/M
3300011271\|Ga0137393_10626497	All Organisms → cellular organisms → Bacteria → Proteobacteria	922	Open in IMG/M
3300011271\|Ga0137393_11147897	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300011271\|Ga0137393_11286190	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300012096\|Ga0137389_11643273	All Organisms → cellular organisms → Bacteria → Acidobacteria	538	Open in IMG/M
3300012189\|Ga0137388_11586146	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300012189\|Ga0137388_11722534	All Organisms → cellular organisms → Bacteria → Acidobacteria	560	Open in IMG/M
3300012198\|Ga0137364_10221961	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1390	Open in IMG/M
3300012198\|Ga0137364_10549602	All Organisms → cellular organisms → Bacteria → Acidobacteria	869	Open in IMG/M
3300012199\|Ga0137383_10037779	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3421	Open in IMG/M
3300012200\|Ga0137382_10973257	All Organisms → cellular organisms → Bacteria → Acidobacteria	610	Open in IMG/M
3300012202\|Ga0137363_10132606	All Organisms → cellular organisms → Bacteria	1937	Open in IMG/M
3300012202\|Ga0137363_11364854	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300012202\|Ga0137363_11598425	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300012202\|Ga0137363_11733384	Not Available	517	Open in IMG/M
3300012203\|Ga0137399_10121678	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2051	Open in IMG/M
3300012203\|Ga0137399_10635132	All Organisms → cellular organisms → Bacteria → Acidobacteria	898	Open in IMG/M
3300012203\|Ga0137399_11514574	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300012205\|Ga0137362_10029363	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4340	Open in IMG/M
3300012205\|Ga0137362_10731711	All Organisms → cellular organisms → Bacteria → Acidobacteria	849	Open in IMG/M
3300012205\|Ga0137362_10774529	Not Available	823	Open in IMG/M
3300012208\|Ga0137376_10200425	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1726	Open in IMG/M
3300012208\|Ga0137376_10361548	All Organisms → cellular organisms → Bacteria → Acidobacteria	1260	Open in IMG/M
3300012208\|Ga0137376_10983798	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
3300012210\|Ga0137378_10718294	All Organisms → cellular organisms → Bacteria → Acidobacteria	910	Open in IMG/M
3300012211\|Ga0137377_10100649	All Organisms → cellular organisms → Bacteria → Acidobacteria	2737	Open in IMG/M
3300012211\|Ga0137377_10506950	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1145	Open in IMG/M
3300012211\|Ga0137377_11166411	Not Available	700	Open in IMG/M
3300012285\|Ga0137370_10782462	Not Available	592	Open in IMG/M
3300012285\|Ga0137370_10848851	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300012359\|Ga0137385_10828635	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300012361\|Ga0137360_11443551	Not Available	592	Open in IMG/M
3300012362\|Ga0137361_11334039	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300012362\|Ga0137361_11617378	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300012362\|Ga0137361_11866052	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300012363\|Ga0137390_11625912	Not Available	583	Open in IMG/M
3300012363\|Ga0137390_11783228	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300012363\|Ga0137390_12018996	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300012582\|Ga0137358_10077521	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2235	Open in IMG/M
3300012582\|Ga0137358_10724053	Not Available	665	Open in IMG/M
3300012683\|Ga0137398_10399687	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300012683\|Ga0137398_10633063	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300012683\|Ga0137398_11208648	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300012917\|Ga0137395_10327697	All Organisms → cellular organisms → Bacteria → Acidobacteria	1089	Open in IMG/M
3300012918\|Ga0137396_10001863	All Organisms → cellular organisms → Bacteria	11335	Open in IMG/M
3300012918\|Ga0137396_10324901	All Organisms → cellular organisms → Bacteria	1138	Open in IMG/M
3300012918\|Ga0137396_11145243	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300012922\|Ga0137394_11023817	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300012923\|Ga0137359_10045558	All Organisms → cellular organisms → Bacteria	3806	Open in IMG/M
3300012925\|Ga0137419_10120418	All Organisms → cellular organisms → Bacteria → Acidobacteria	1851	Open in IMG/M
3300012925\|Ga0137419_10991082	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300012927\|Ga0137416_10097225	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2206	Open in IMG/M
3300012930\|Ga0137407_10794282	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300012944\|Ga0137410_11768067	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300014153\|Ga0181527_1022368	All Organisms → cellular organisms → Bacteria → Acidobacteria	4009	Open in IMG/M
3300014153\|Ga0181527_1088718	All Organisms → cellular organisms → Bacteria	1489	Open in IMG/M
3300014501\|Ga0182024_10257256	All Organisms → cellular organisms → Bacteria	2337	Open in IMG/M
3300014501\|Ga0182024_11285882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	849	Open in IMG/M
3300015051\|Ga0137414_1158809	All Organisms → cellular organisms → Bacteria	4436	Open in IMG/M
3300015051\|Ga0137414_1187922	All Organisms → cellular organisms → Bacteria → Proteobacteria	1663	Open in IMG/M
3300015054\|Ga0137420_1318614	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4921	Open in IMG/M
3300015264\|Ga0137403_11005746	All Organisms → cellular organisms → Bacteria → Acidobacteria	681	Open in IMG/M
3300017659\|Ga0134083_10605138	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300019789\|Ga0137408_1391532	All Organisms → cellular organisms → Bacteria → Acidobacteria	1806	Open in IMG/M
3300019866\|Ga0193756_1038056	All Organisms → cellular organisms → Bacteria → Acidobacteria	675	Open in IMG/M
3300020199\|Ga0179592_10026548	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2599	Open in IMG/M
3300021086\|Ga0179596_10343002	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300021168\|Ga0210406_10113521	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2294	Open in IMG/M
3300021171\|Ga0210405_10536015	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300021178\|Ga0210408_10647247	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300021178\|Ga0210408_11077588	All Organisms → cellular organisms → Bacteria → Acidobacteria	619	Open in IMG/M
3300021404\|Ga0210389_11083286	Not Available	620	Open in IMG/M
3300021406\|Ga0210386_10339262	All Organisms → cellular organisms → Bacteria	1291	Open in IMG/M
3300021420\|Ga0210394_10234818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1604	Open in IMG/M
3300021474\|Ga0210390_10470695	All Organisms → cellular organisms → Bacteria → Acidobacteria	1060	Open in IMG/M
3300021478\|Ga0210402_10286894	All Organisms → cellular organisms → Bacteria	1523	Open in IMG/M
3300021478\|Ga0210402_10641297	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	983	Open in IMG/M
3300021478\|Ga0210402_11916306	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300021479\|Ga0210410_10610107	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300022498\|Ga0242644_1028425	All Organisms → cellular organisms → Bacteria → Acidobacteria	591	Open in IMG/M
3300026376\|Ga0257167_1015781	Not Available	1052	Open in IMG/M
3300026482\|Ga0257172_1039924	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300026508\|Ga0257161_1020764	All Organisms → cellular organisms → Bacteria	1254	Open in IMG/M
3300026538\|Ga0209056_10198467	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1472	Open in IMG/M
3300026551\|Ga0209648_10144775	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1885	Open in IMG/M
3300026551\|Ga0209648_10413204	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300026555\|Ga0179593_1043922	All Organisms → cellular organisms → Bacteria	3832	Open in IMG/M
3300026557\|Ga0179587_10357820	All Organisms → cellular organisms → Bacteria → Acidobacteria	947	Open in IMG/M
3300026557\|Ga0179587_10465077	Not Available	828	Open in IMG/M
3300026557\|Ga0179587_10786273	All Organisms → cellular organisms → Bacteria → Acidobacteria	627	Open in IMG/M
3300027635\|Ga0209625_1131367	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300027655\|Ga0209388_1066688	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300027855\|Ga0209693_10057962	All Organisms → cellular organisms → Bacteria	1905	Open in IMG/M
3300027862\|Ga0209701_10519992	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300027875\|Ga0209283_10117766	All Organisms → cellular organisms → Bacteria	1748	Open in IMG/M
3300027884\|Ga0209275_10027741	All Organisms → cellular organisms → Bacteria	2590	Open in IMG/M
3300027889\|Ga0209380_10082303	All Organisms → cellular organisms → Bacteria	1849	Open in IMG/M
3300027911\|Ga0209698_11071793	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300028047\|Ga0209526_10106249	All Organisms → cellular organisms → Bacteria	1975	Open in IMG/M
3300030991\|Ga0073994_10049172	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300031231\|Ga0170824_115747959	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300031234\|Ga0302325_11009184	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300031525\|Ga0302326_11454510	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300031672\|Ga0307373_10038851	All Organisms → cellular organisms → Bacteria	5263	Open in IMG/M
3300031672\|Ga0307373_10100076	All Organisms → cellular organisms → Bacteria → Acidobacteria	2518	Open in IMG/M
3300031672\|Ga0307373_10176432	All Organisms → cellular organisms → Bacteria	1590	Open in IMG/M
3300031708\|Ga0310686_101051391	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300031708\|Ga0310686_103370146	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300031754\|Ga0307475_11345921	Not Available	552	Open in IMG/M
3300031833\|Ga0310917_10627783	All Organisms → cellular organisms → Bacteria → Acidobacteria	729	Open in IMG/M
3300032160\|Ga0311301_11893183	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	704	Open in IMG/M
3300033134\|Ga0335073_10060195	All Organisms → cellular organisms → Bacteria → Acidobacteria	5035	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.35%
Host-Associated	Host-Associated	0.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.39%
Aquatic	Environmental → Aquatic	1.96%
Plants	Host-Associated → Plants	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.08%
Freshwater	Environmental → Aquatic → Freshwater	1.31%
Peat	Environmental → Terrestrial → Peat	1.31%
Sediment	Environmental → Aquatic → Sediment	0.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.31%
Loam	Environmental → Terrestrial → Soil → Loam	6.54%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.27%
Clay	Environmental → Terrestrial → Soil → Clay	1.96%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.31%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	65.36%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.07%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.54%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.96%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	1.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.31%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.31%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	59.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.96%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	1.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.31%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.31%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.31%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.31%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.31%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.65%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019866	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022498	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026376	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-B	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031672	Soil microbial communities from Risofladan, Vaasa, Finland - OX-2	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_101666301	3300001593	Forest Soil	YDNTAHRRGFRVVAHFIGGKLTKTAQTIPDWAAKVFGKDLRSGKQHEKPGRGR*
JGIcombinedJ26739_1001004931	3300002245	Forest Soil	AHRRGFRVVAHFIGGKLTKTAQTIPDWAAKVFGKDLRSGKQHEKPGRGR*
JGIcombinedJ26739_1016369801	3300002245	Forest Soil	RRGFRVVAHFIGGKLSKTAQTIPDWAAGVFGKELHPAKQHEKSRRGR*
JGI25615J43890_10977591	3300002910	Grasslands Soil	AHFIGGKLTKTAQTIPDWAAKVFGKDLHSGKQHEKPGRGR*
JGI25617J43924_100082385	3300002914	Grasslands Soil	VAHFTGGKLSKAAQSIPDWAARVFGKELEAAKQYAKPGRGR*
Ga0066679_109837151	3300005176	Soil	SHLFVANTAHRRGFRVVAQFIGGELSKAAQTIPDWAAKVFGKELRAAKQHEKPGRGR*
Ga0070731_109246682	3300005538	Surface Soil	FRVVAHFIGGKLTKTAQTIPDWAAKVFGKDLHSGKQHEKPGRGR*
Ga0070762_100285071	3300005602	Soil	ELSKVAQTIPDWAARVFGKDLHATKHKEKPGRGR*
Ga0068863_1027444611	3300005841	Switchgrass Rhizosphere	YDNTAHRRGFRVVAHFIGGKLTKTAQTIPDWAAKVFGKELHTAKQHEKPGRGR*
Ga0066665_116885513	3300006796	Soil	AQFVGGELSKTAQTIPDWAARVFGKELHAAKHHEKAGRGR*
Ga0099791_100463773	3300007255	Vadose Zone Soil	VVAHFIGGKLSKTAQTIPDWAAKLFGKELHAAKQHEKPGRGR*
Ga0099793_102614932	3300007258	Vadose Zone Soil	RGYRVVVQFIGGEWSKAAQTIPDWAARVFGKELHAAKPHEKSGRGR*
Ga0099793_102668871	3300007258	Vadose Zone Soil	NQVNDELSKTAQTIPDWVAKVFDKELHAAKQQKKPRRGR*
Ga0099794_101145161	3300007265	Vadose Zone Soil	DNTAHRRGFRVVAHFIESKLSKTAQTIPDWAAKVFGKELHATKQPEKPGRGR*
Ga0099794_104046122	3300007265	Vadose Zone Soil	FRVVAQFIGGELSKAAQTIPDWAAKVFGKDLQAANQHEKPGRGR*
Ga0099795_100755401	3300007788	Vadose Zone Soil	GGELSKAAQTIPDWTAKVFGKELRAATQHEKPMRGR*
Ga0099829_100416155	3300009038	Vadose Zone Soil	YDNTAHRRGFRVVAQFIGGELSKAAQTIPDWTAKVFGKELHAAKQHEKPMRGR*
Ga0099829_105751251	3300009038	Vadose Zone Soil	NTAHRRGFRVVAHFIGRKLSKTAQTIPDWAAKLFGKELRAAKQHEKPGRGR*
Ga0099829_110947591	3300009038	Vadose Zone Soil	HFTGSKLSKAAQSLPDWAARVFGKELEAAKQHAKPGRGR*
Ga0099829_111927462	3300009038	Vadose Zone Soil	LHHRRGYKVVAEFIGGELSKVAQTVSDWAAKVFGKDLHTAKHKEKPGRGR*
Ga0099829_115606741	3300009038	Vadose Zone Soil	RGFRVVAHFIGGKLSKTAQTIPDWAAKVFGKELHAAKQHEKPGRGR*
Ga0099830_109775041	3300009088	Vadose Zone Soil	DNTAHRRGFRVVAHFIGGKLSKTAQTIPDWADKVFGKELHAAKQHEKPARGR*
Ga0099830_112654111	3300009088	Vadose Zone Soil	TAHRRGFRVVAYFIGGKLSETAQTIPDWAAKVFGKDPHARKQHEKPGRGR*
Ga0099828_104727292	3300009089	Vadose Zone Soil	VVAHFIGGKLSKTAQTIPDWAAKVFGKDLHSAKQHEKPGRGR*
Ga0099828_106468601	3300009089	Vadose Zone Soil	IGGKLSKTAQTIPDWAAKVFGKELHATKQHETPKRGR*
Ga0099827_105101861	3300009090	Vadose Zone Soil	NTGHRRGFRVVAHFIGGKLSKTAQTIPDWAAKVFGKELHAARQHEKSRRGR*
Ga0099827_115542742	3300009090	Vadose Zone Soil	IGGKLSKTAQTIPDWAAKVFGKELHAVKQHEKPGRGR*
Ga0099827_118051472	3300009090	Vadose Zone Soil	VVAQFIGGELSKVAQTIPDWVARVFGKDLHAAKHKEKPGRGR*
Ga0099827_118154051	3300009090	Vadose Zone Soil	RRGFRVVAHFIGGKLSKTAQTIPDWAAKVFGKELRPAEQHEKSGRGR*
Ga0066709_1016173892	3300009137	Grasslands Soil	GGELSKTAQTIPDWAARVFGKELHASKQHEKAGRGR*
Ga0066709_1022617252	3300009137	Grasslands Soil	HFIGDKLSKTAQTIPDWAAKVLGKELYSAKQYEKSRRGR*
Ga0099792_108241692	3300009143	Vadose Zone Soil	YRVVAQFIGGELSKAAQTIPDWAARVFGKELHAAKPHEKSGRGR*
Ga0116220_104151121	3300009525	Peatlands Soil	VVAHFIGGKFSKTAQTIPDWAAKVFGKQLHEAKQHQKPGRGR*
Ga0134088_105585552	3300010304	Grasslands Soil	FIGGKLTKTAQTIPDWAAKVFGKDLHSAKQHEKPGRGR*
Ga0074045_103610691	3300010341	Bog Forest Soil	RVVAQFIGGKLSKSAQTIPDWAAKVFGKELHAAKQHEKPRRGR*
Ga0074044_109318551	3300010343	Bog Forest Soil	DNTAHRRGFRVVAHFIGGKLSKTAQTIPDWAAKVFGKDLHSAKQHEKPGRGR*
Ga0136449_1038053071	3300010379	Peatlands Soil	RGFRVVAHFIGGKLSKTAQTIPDWVAKVFGRELHAAKQHGKPARGR*
Ga0150983_106883471	3300011120	Forest Soil	ELSKVAQTIPDWAAKVFGKDLHAPKHKEKPGRGR*
Ga0137392_115857071	3300011269	Vadose Zone Soil	HFIGGELSKTAQTIPDWAAKVFGKELHAAKQHEKPRRGR*
Ga0137391_100423741	3300011270	Vadose Zone Soil	HFIGGKLSKTAQTIPDWAAKVFGKELRAAEQHEKSGRGR*
Ga0137391_107740241	3300011270	Vadose Zone Soil	VAQFIGGELSKAAQTIPDWAAKVFGKDLQAANQHEKPGRGR*
Ga0137393_101251203	3300011271	Vadose Zone Soil	VAHFIGGKLTKTAQTIPDWGAKAFGKALHAAKQHEKAGRGR*
Ga0137393_106264971	3300011271	Vadose Zone Soil	RGSRVVMHFVGGKLSKTAQAIPDWAAKVFGKELRAAKQRERPGRGR*
Ga0137393_111478972	3300011271	Vadose Zone Soil	YDNTAHRRGFRVVAHFIGGKLSKTAQTIPDWAAKVFGKELHAAKQHEKPGRGR*
Ga0137393_112861901	3300011271	Vadose Zone Soil	AHRRGFRVVAHFIGGKLSKTAQTIPDWAAKLFGKELRAAKQHEKPGRGR*
Ga0137389_116432731	3300012096	Vadose Zone Soil	IGGKLSKTAQTIPDWAAKVFGKELHAAKQHEKPRRGR*
Ga0137388_115861461	3300012189	Vadose Zone Soil	GGKLSETAQTIPDWAAKVFGKDLHATKQHEKPGRGR*
Ga0137388_117225342	3300012189	Vadose Zone Soil	GKLSKTAQTIPDWAAKVFGKELHAVKQHERPGRGR*
Ga0137364_102219613	3300012198	Vadose Zone Soil	VVAQFVGGELTKSAQTIPDWAARVFGKELHASKQHEKAGRGR*
Ga0137364_105496021	3300012198	Vadose Zone Soil	NTAHRRGYRVVAQFVGGELTKTAQTIPDWAARVFGKELHAAKHHEKAGRGR*
Ga0137383_100377791	3300012199	Vadose Zone Soil	YRVVAQFVGGELSKTAQTIPDWAARVFGKELHAAKQHEKAGRVR*
Ga0137382_109732572	3300012200	Vadose Zone Soil	AHRRGYRVVAQFVGGELSKTAQTIPDWAARVFGKELHAAKHHEKAGRGR*
Ga0137363_101326065	3300012202	Vadose Zone Soil	AHDRGYRVVAHFTGGELGKAAQTIPDWAAKVFGKELHSAKQRGKPGRT*
Ga0137363_113648541	3300012202	Vadose Zone Soil	HFVGGELSKAAQTIPDWAASVFGKELHPARQRAKPGRGR*
Ga0137363_115984251	3300012202	Vadose Zone Soil	TAHRRGFRVVAHFIGGKLSKTVESIPDWAAKVFGKELRAAKQHEKPARGR*
Ga0137363_117333842	3300012202	Vadose Zone Soil	VGGELSKTAQTIPDWAARVFGKELHASKQHEKAGRGR*
Ga0137399_101216781	3300012203	Vadose Zone Soil	HFIGGKLSKTAPTIPDWAAKVFGKELCPAEQHEKSGRGR*
Ga0137399_106351322	3300012203	Vadose Zone Soil	DNTAHDRGYRVVAHFIGGKLKNTAQTIPDWAAKMFGKELHPAKQRAKPGHGR*
Ga0137399_115145741	3300012203	Vadose Zone Soil	FRVVAHFVGGKLSKTAQTIPDWAVKVFGKELHAAKQHEKLVRGR*
Ga0137362_100293631	3300012205	Vadose Zone Soil	VYDNTAHRRGYRVVAHFIGGELSKAAQTIPDWAAIVFGKELHPARRRAKPGRGR*
Ga0137362_107317111	3300012205	Vadose Zone Soil	TAHNRGYRVVAHFTGGKLSKTAQSIPDWAARVFGKELECAKQHAKPGRGR*
Ga0137362_107745292	3300012205	Vadose Zone Soil	QFIGGELSKAAQTIPDWTAKVFGKELHAAKEQEKAGRGR*
Ga0137376_102004252	3300012208	Vadose Zone Soil	DNTAHRRGYRVVAQFVGGELSKTAQTIPDWAARVFGKELHAAKQHEKAGRVR*
Ga0137376_103615482	3300012208	Vadose Zone Soil	GGELTKTAQTIPDWAARVFGKELHASKQHEKAGRGR*
Ga0137376_109837982	3300012208	Vadose Zone Soil	GYRVVAQFVGGELSKTAQTIPDWAARVFGKELHASKQHEKAGRGR*
Ga0137378_107182941	3300012210	Vadose Zone Soil	RVVAHFIGGKLTKTVQTIPDWAAKVFGKELHPAKQRAKPGRDR*
Ga0137377_101006491	3300012211	Vadose Zone Soil	DNTAHRRGYRVVAHFIGGELSKAAQTIPDWAASVFGKELHPARRRAKPGRGR*
Ga0137377_105069502	3300012211	Vadose Zone Soil	RGYRVVAQFVGGELSKTAQTIPDWAARVFGKELHASKQHENAGRGR*
Ga0137377_111664111	3300012211	Vadose Zone Soil	GGELSKAAQTIPDWTAKVFGKELRVAKQHEKPMRGR*
Ga0137370_107824621	3300012285	Vadose Zone Soil	RRGFRIEAHFIGGKLSKTAQMIPDWAARVFGKGLHAARQHEKPGRER*
Ga0137370_108488512	3300012285	Vadose Zone Soil	VGGELTKTAQTIPDWAARVFGKELHAAKHHEKAGRGR*
Ga0137385_108286351	3300012359	Vadose Zone Soil	NTAHRRGFRVIAHFIGGKLTKTAQTIPDWAAKVFGKDLHSGKQHEKPGRGR*
Ga0137360_114435511	3300012361	Vadose Zone Soil	DNTAHRRGFRVVAHFIGGKLSKTAQTIPDWAAKVFGKELHPPEQHEKSGRGR*
Ga0137361_113340392	3300012362	Vadose Zone Soil	HRRGFRVVAHFVGGKLSKTAQTIPDWAAKVFGKELHAAKQHEKPGRGR*
Ga0137361_116173781	3300012362	Vadose Zone Soil	FIGGKLAKTAQTIPDWAAKVFGKDLHSGKQHEKPGRGR*
Ga0137361_118660521	3300012362	Vadose Zone Soil	RVVAHFICGELSKAAQTIPDWAASVFGKELHPARRRAKPGRGR*
Ga0137390_116259122	3300012363	Vadose Zone Soil	RVVAQFIGGELSKAAQTIPDWAAKVFGKELRAAKQHAKPTRGR*
Ga0137390_117832282	3300012363	Vadose Zone Soil	VVAQFIGGELSKAAQTIPDWAAKVFGKDLQAANQHEKPGRGR*
Ga0137390_120189961	3300012363	Vadose Zone Soil	FRIVAHFIGGKLSKTAQTIPDWAAKVFGKELHTGKQYEKPGRGR*
Ga0137358_100775211	3300012582	Vadose Zone Soil	AHFVGGKLSKTAQTTPDWAVKVFGKELHAAKQHEKLVRGR*
Ga0137358_107240531	3300012582	Vadose Zone Soil	NTAHRRGFRVVAHFIGGKLSKTAQTIPDWAAKVFGRELHPPEQHEKSGRGR*
Ga0137398_103996872	3300012683	Vadose Zone Soil	YDNTVHRRGFRVVAQFIGGKLSKSAQIIPDWAAKVFGKELHAAKQHEKPGRGR*
Ga0137398_106330632	3300012683	Vadose Zone Soil	VVAHFIGGKLSKTAQTIPDWAAKVFGKDLHASKQREKPGRGR*
Ga0137398_112086482	3300012683	Vadose Zone Soil	VVAQFIGGELSKAAQTIPDWAARVFGKELHTAKPHEKSGRGR*
Ga0137395_103276971	3300012917	Vadose Zone Soil	LYDNTAHDRGYRVVAQFTGGKLSKAAQAIPDWAAKVFGKELQPAKQRANSGRGR*
Ga0137396_100018639	3300012918	Vadose Zone Soil	YDNTAHRRGYRVVAHFIGGELSKVAQTIPDWAARVLGKELHAAKHKEKPGRGR*
Ga0137396_103249012	3300012918	Vadose Zone Soil	QFIGGELSKVAQTIPDWAARVFGKDLHAAKHKEKPGRGR*
Ga0137396_111452431	3300012918	Vadose Zone Soil	GELSKAAQTIPDWAARVFGKELHAAKPHEKSGRGR*
Ga0137394_110238171	3300012922	Vadose Zone Soil	HRRGFRVVAHFIGGKLSKTAQTIPDWAAKLFGKELHAAKQHEKPGRGR*
Ga0137359_100455581	3300012923	Vadose Zone Soil	NTAHRRGFRVVAHFIGGKLTKTAQTIPDWAAKEFGKDLRSGKQHEKPGRER*
Ga0137419_101204183	3300012925	Vadose Zone Soil	RRGSRVVMHFVGGKLCKTAQAIPDWAAKVFGKELRAAKQRERPGRGR*
Ga0137419_109910822	3300012925	Vadose Zone Soil	YRVVAHFIGGELSKVAQTIPDWAARVFGKDLHAAKHKEKPGRGR*
Ga0137416_100972251	3300012927	Vadose Zone Soil	HRRGYRVVAQFVGGELSKTAQTIPDWAARVFGKELHAAKHSEKAGRGR*
Ga0137407_107942821	3300012930	Vadose Zone Soil	AHRRGFRVVAHFIESKLSKTAQTIPDWAAKVFGKELHATKQPEKPGRGR*
Ga0137410_117680671	3300012944	Vadose Zone Soil	FRVVAQFIGGKLSKSAQIIPDWAAKVFGKELHAAKQHEKPGRGR*
Ga0181527_10223683	3300014153	Bog	VAHFIGGKLSKTAQTIPDWAAKVFGKDLYSAKQHDKPGRGR*
Ga0181527_10887182	3300014153	Bog	RRGFRVVAHFIGGKLSKTAQTIPDWAAKVFGKDLYSAKRHEKPGRGR*
Ga0182024_102572561	3300014501	Permafrost	NTAHRRGFRVVAHFIGGKLTKTAQTIPDWAAKVFGKDLHSGKQHEKPGRGR*
Ga0182024_112858821	3300014501	Permafrost	NTAHRRGFRVVAHFIGGKLTKTAQTIPDWAAKVFGKDLHSAKQRVKPGRDR*
Ga0137414_11588097	3300015051	Vadose Zone Soil	VAHFIGGKLSKTAQTIPDWAAKVFAGNYTTPEQHEKSGRGR*
Ga0137414_11879224	3300015051	Vadose Zone Soil	HRRGFRVVAYFIGGKLAKTAQTIPDWAAKVFGKELHAVRQHENPGRGR*
Ga0137420_13186146	3300015054	Vadose Zone Soil	VAQFIGGELSKAAQTIPDWTAKVFGKELRAAKRHEKPMRGR*
Ga0137403_110057461	3300015264	Vadose Zone Soil	RVVAQFIGGEVSKVAQTIPDWVAKVFDKELRAAKHQEKPGRGR*
Ga0134083_106051381	3300017659	Grasslands Soil	NTAHRHGFRLVAHFIGGKLGKAGQTIPDWAARVFGKDLHAAKQHEKPGSGR
Ga0137408_13915323	3300019789	Vadose Zone Soil	VAHFIGGKLNKTAQTIPDWAAKVFGKELHAAKQHEKPGRGR
Ga0193756_10380561	3300019866	Soil	VAHFIGGKLNKTAQTIPDWAAKVFGKKLHEAKQHEKPGRGR
Ga0179592_100265481	3300020199	Vadose Zone Soil	TAHDRGYRVVAHFTGGELSKAAQTIPDWAAKVFGKELHPAKQRAKPGRGR
Ga0179596_103430022	3300021086	Vadose Zone Soil	RRSFRVVAQFIGGELSKAAQTIPDWAAKVFGKDLQAANQHEKPGRGR
Ga0210406_101135211	3300021168	Soil	IGGKLSKTTETVPDWVAKVFGRELHVAKLHGKPARGR
Ga0210405_105360151	3300021171	Soil	RRGFRVVAHFIGGKLSKTAQTIPDWAAKVFGKDLHSAKQHEKPGRGR
Ga0210408_106472471	3300021178	Soil	VYDNTAHRRGFRVVGHFIGGELSKTAQTIPDWAAKVFGKELHAAKQHEKPRRGR
Ga0210408_110775882	3300021178	Soil	AQFIGGELSKVAQTIPDWATRVFGKDLHAAKHKEKPGRGR
Ga0210389_110832861	3300021404	Soil	FIGGKLSKTIETVPDWVAKVFGRELHVAKLHGKPARGR
Ga0210386_103392621	3300021406	Soil	VVAHFIGGKLSKTAQTIPDWAAKVFGKDLHSAKQHEKPGRGR
Ga0210394_102348183	3300021420	Soil	YRVVAQCIGGELSKVAQTIPDWAARVFGKDLHAAKHKEKPGRGR
Ga0210390_104706953	3300021474	Soil	GYRVVAQFIGGELSKVAQTIPDWAAKVFGKELHTAKQQAKPGRGR
Ga0210402_102868942	3300021478	Soil	GFRVAAEFVGGELTKVAQTVPDWVAKLFGKELQTAKQHEKPGRAR
Ga0210402_106412971	3300021478	Soil	GGHLSKAAQTIPDWAAKVFGNELKPAVERGKSGRAR
Ga0210402_119163062	3300021478	Soil	FRVVAHFIGGKLSKTTQTIPDWAAKVFGKELHAAKQHEKLGRGH
Ga0210410_106101071	3300021479	Soil	VVAHFIGGKLSKTAQTIPDWAAKVFGKDLHSAKRHEKPGRGR
Ga0242644_10284251	3300022498	Soil	NTAHRRGYRVVAQFIGGELSKVAQTIPDWAAKVFGKQLQAVKHHEKPGRGR
Ga0257167_10157812	3300026376	Soil	VAQFIGGELSKAAQTIPDWTAKVFGKELRAAKRHEKPMRGR
Ga0257172_10399242	3300026482	Soil	VGHFIGGELSKTAQTVPDWAAKVFGKELHAAKQHEKPRRGR
Ga0257161_10207643	3300026508	Soil	FIGGELSKAAQTIPDWTAKVFGKELHAAKEQEKAGRGR
Ga0209056_101984671	3300026538	Soil	VGGKLSKTAQTIPDWAARVFGKELHAAKHGEKAGRGR
Ga0209648_101447753	3300026551	Grasslands Soil	IGGKLSKTAQTIPDWAAKVFGKELHATKQHETPKRGR
Ga0209648_104132042	3300026551	Grasslands Soil	HRRGFRVVAHFIGGKLSKTAQAIPDWAAKVFGKELRAAKQRERPGRGR
Ga0179593_10439225	3300026555	Vadose Zone Soil	TAHRRGFRVVAHFIGGKLSKTAQTIPDWAAKVFGRELHPPEQREKSGRGR
Ga0179587_103578201	3300026557	Vadose Zone Soil	VVAHFIGGKLSKTAQTIPDWAARVFGKELYAAKQREMPMRGR
Ga0179587_104650771	3300026557	Vadose Zone Soil	GELSKAAQTIPDWTAKVFGKELRAAKQHEKPMRGR
Ga0179587_107862731	3300026557	Vadose Zone Soil	TTHNRGYRVVAHFTGGKLSKAAQSIPDWAARVFGKELEAAKQHAKPGRGR
Ga0209625_11313671	3300027635	Forest Soil	HRRGFRVVAHFIGGKLTKTAQTIPDWAAKVFGKDLHSAKQHEKPGRGR
Ga0209388_10666883	3300027655	Vadose Zone Soil	RRGFRVVAHFIGGKLSKTAQTIPDWAAKLFGKELHVAKQHEKPGRGR
Ga0209693_100579622	3300027855	Soil	VAHFIGGKLTKTAQTIPDWAAMVFGKDLHSGKQHEKPGRGR
Ga0209701_105199922	3300027862	Vadose Zone Soil	DNTAHRRGFRVVAHFIGGKLSKTAQTIPDWAAKVFGKELHAAKQHEKPGRGR
Ga0209283_101177661	3300027875	Vadose Zone Soil	VAHFIGSKLSKTAQTIPDWAAKVFGKELHAAKQHEKLGRGR
Ga0209275_100277414	3300027884	Soil	AQFIGGKLSKSAQTIPDWAAKVFGKELHAAKQHEKPGRGR
Ga0209380_100823032	3300027889	Soil	IGGKLTKTAQTIPDWAAKVFGKDLHSGKQHEKPGRGR
Ga0209698_110717932	3300027911	Watersheds	IGGKLSKTAQAIPDWAAKVFGKELRAAKQHEKLGRER
Ga0209526_101062494	3300028047	Forest Soil	AHFIGGKLTKTAQTIPDWAAKVFGKDLRSGKQHEKPGRGR
Ga0073994_100491721	3300030991	Soil	GGELSKTAQTIPDWAAKVFGKELHAAKQHEKPRRGR
Ga0170824_1157479592	3300031231	Forest Soil	LNDNTAHRRGYRVVAEFIGGELNKVAQTIPDWAAKVFCKELHTAKAHEKAGRGR
Ga0302325_110091841	3300031234	Palsa	AHRRGFRVVAHFIGGKLTKTAQTIPDWAAKVFGKDLHAGKQHEKPGRGR
Ga0302326_114545101	3300031525	Palsa	VAHFNDGKLSKTAQTIPDWAAKVFGKDLHSAKQHEKPGRGR
Ga0307373_100388511	3300031672	Soil	FIGGELSKVAQTIPDWAARVFGKDLHAAKHKEKPGRGR
Ga0307373_101000761	3300031672	Soil	RGYRVVAQFIGGELSKVAQTIPDWAARVFGKDLHAAKHKEKPGRGR
Ga0307373_101764321	3300031672	Soil	IGGELSKAAQTIPDWATKVFGKELHTAKQHAKPGHGR
Ga0310686_1010513911	3300031708	Soil	AQFIGGELSKVAQTIPDWAARVFGKDLHAAKHKEKPGRGR
Ga0310686_1033701461	3300031708	Soil	FIGGELSKAAQTIPDWAAKVFGKKLHTTKQHAKPGHGR
Ga0307475_113459211	3300031754	Hardwood Forest Soil	AHFIGGKLSKTTETVPDWVARVFGRELHVAKLHGKPARGR
Ga0310917_106277831	3300031833	Soil	NTAHRRGFRVAAEFVVGKLTKVAQTVPDWVARLFRRELQTAKQHEKAGHGR
Ga0311301_118931831	3300032160	Peatlands Soil	VAQFIGGELSKVAQTVPDWAARVFGKDLHAAKHKEKPGRGR
Ga0335073_100601951	3300033134	Soil	AEFVGGELTKVAQTVPEWVNRLFGKELHAAKQQEKPGRGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F044999

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences