Metagenome / Metatranscriptome Family F045045

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F045045
Family Type	Metagenome / Metatranscriptome
Number of Sequences	153
Average Sequence Length	56 residues
Representative Sequence	MAHPVEKIKELEAEADRGRSPRTPLLALTGVTVVVGVIFAVLVTVALVLYFAYGGK
Number of Associated Samples	113
Number of Associated Scaffolds	153

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.37 %
% of genes near scaffold ends (potentially truncated)	25.49 %
% of genes from short scaffolds (< 2000 bps)	85.62 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.503 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (22.876 % of family members)
Environment Ontology (ENVO)	Unclassified (32.026 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.706 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.38% β-sheet: 0.00% Coil/Unstructured: 47.62%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 153 Family Scaffolds
PF00732	GMC_oxred_N	30.07
PF07040	DUF1326	17.65
PF00730	HhH-GPD	13.07
PF00270	DEAD	13.07
PF00271	Helicase_C	2.61
PF05199	GMC_oxred_C	1.96
PF03176	MMPL	1.31
PF13191	AAA_16	0.65
PF00122	E1-E2_ATPase	0.65
PF00162	PGK	0.65
PF08494	DEAD_assoc	0.65
PF00107	ADH_zinc_N	0.65
PF13602	ADH_zinc_N_2	0.65
PF06123	CreD	0.65
PF05834	Lycopene_cycl	0.65
PF07883	Cupin_2	0.65
PF08240	ADH_N	0.65
PF09948	DUF2182	0.65
PF00561	Abhydrolase_1	0.65

COG ID	Name	Functional Category	% Frequency in 153 Family Scaffolds
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	32.03
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	17.65
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	13.07
COG0177	Endonuclease III	Replication, recombination and repair [L]	13.07
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	13.07
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	13.07
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	13.07
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	1.31
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	1.31
COG0126	3-phosphoglycerate kinase	Carbohydrate transport and metabolism [G]	0.65
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	0.65
COG1201	Lhr-like helicase	Replication, recombination and repair [L]	0.65
COG2216	K+ transport ATPase, ATPase subunit KdpB	Inorganic ion transport and metabolism [P]	0.65
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	0.65
COG4452	Inner membrane protein CreD involved in colicin E2 resistance	Defense mechanisms [V]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.50 %
Unclassified	root	N/A	8.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.50 %
Unclassified	root	N/A	8.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.50 %
Unclassified	root	N/A	8.50 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	80.39 %
Unclassified	root	N/A	8.50 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	80.39 %
Unclassified	root	N/A	8.50 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	52.94 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	9.15 %
Unclassified	root	N/A	8.50 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	1.31 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	52.29 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	9.15 %
Unclassified	root	N/A	8.50 %
Actinobacteria bacterium 13_1_20CM_4_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_68_12	1.31 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.65 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	52.29 %
Unclassified	root	N/A	8.50 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	1.96 %
Actinobacteria bacterium 13_1_20CM_4_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_68_12	1.31 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.65 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	52.29 %
Unclassified	root	N/A	8.50 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1.96 %
Actinobacteria bacterium 13_1_20CM_4_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_68_12	1.31 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.65 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	52.29 %
Unclassified	root	N/A	8.50 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1.96 %
Actinobacteria bacterium 13_1_20CM_4_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_68_12	1.31 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459023\|GZGNO2B01DK05K	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0202913	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300000956\|JGI10216J12902_100254165	All Organisms → cellular organisms → Bacteria	2919	Open in IMG/M
3300000956\|JGI10216J12902_101654177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300000956\|JGI10216J12902_102132317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2995	Open in IMG/M
3300000956\|JGI10216J12902_102892471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	829	Open in IMG/M
3300000956\|JGI10216J12902_103332466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	718	Open in IMG/M
3300000956\|JGI10216J12902_104626048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1125	Open in IMG/M
3300000956\|JGI10216J12902_104832051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300000956\|JGI10216J12902_116223713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300002568\|C688J35102_120845941	All Organisms → cellular organisms → Bacteria	1794	Open in IMG/M
3300002568\|C688J35102_120944544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2744	Open in IMG/M
3300004114\|Ga0062593_100350219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1291	Open in IMG/M
3300004114\|Ga0062593_101238223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	786	Open in IMG/M
3300004114\|Ga0062593_101380366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	752	Open in IMG/M
3300004157\|Ga0062590_100190136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1469	Open in IMG/M
3300004479\|Ga0062595_100161952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1322	Open in IMG/M
3300004479\|Ga0062595_100479844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	925	Open in IMG/M
3300005093\|Ga0062594_100144506	All Organisms → cellular organisms → Bacteria	1543	Open in IMG/M
3300005093\|Ga0062594_100232801	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300005093\|Ga0062594_102383631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300005167\|Ga0066672_10489156	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300005176\|Ga0066679_10379819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	925	Open in IMG/M
3300005177\|Ga0066690_10410525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	919	Open in IMG/M
3300005178\|Ga0066688_10581511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	720	Open in IMG/M
3300005180\|Ga0066685_10474898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	867	Open in IMG/M
3300005184\|Ga0066671_10042418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2238	Open in IMG/M
3300005186\|Ga0066676_10755383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	661	Open in IMG/M
3300005332\|Ga0066388_101364484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1228	Open in IMG/M
3300005332\|Ga0066388_102523729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	935	Open in IMG/M
3300005354\|Ga0070675_101075800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	739	Open in IMG/M
3300005434\|Ga0070709_11543976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300005436\|Ga0070713_100083900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2725	Open in IMG/M
3300005451\|Ga0066681_10472693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	771	Open in IMG/M
3300005451\|Ga0066681_10504945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	746	Open in IMG/M
3300005451\|Ga0066681_10742554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	595	Open in IMG/M
3300005455\|Ga0070663_101784321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300005458\|Ga0070681_11249265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	665	Open in IMG/M
3300005526\|Ga0073909_10163286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	938	Open in IMG/M
3300005540\|Ga0066697_10212697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1149	Open in IMG/M
3300005553\|Ga0066695_10187233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1296	Open in IMG/M
3300005558\|Ga0066698_10801384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	610	Open in IMG/M
3300005560\|Ga0066670_10587473	Not Available	679	Open in IMG/M
3300005568\|Ga0066703_10805850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300005578\|Ga0068854_102052444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300005587\|Ga0066654_10132769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1246	Open in IMG/M
3300005587\|Ga0066654_10395717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	753	Open in IMG/M
3300005615\|Ga0070702_100434921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	948	Open in IMG/M
3300005764\|Ga0066903_100103541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3860	Open in IMG/M
3300005764\|Ga0066903_100138246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3454	Open in IMG/M
3300005985\|Ga0081539_10028575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3502	Open in IMG/M
3300006038\|Ga0075365_10158861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1574	Open in IMG/M
3300006046\|Ga0066652_100339897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1347	Open in IMG/M
3300006046\|Ga0066652_100778462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	914	Open in IMG/M
3300006046\|Ga0066652_101667305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M
3300006051\|Ga0075364_11069835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	548	Open in IMG/M
3300006058\|Ga0075432_10076015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1212	Open in IMG/M
3300006755\|Ga0079222_10521149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	878	Open in IMG/M
3300006791\|Ga0066653_10230540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	943	Open in IMG/M
3300006796\|Ga0066665_10750453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	772	Open in IMG/M
3300006800\|Ga0066660_10350467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1199	Open in IMG/M
3300006806\|Ga0079220_12066549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300006845\|Ga0075421_100175065	All Organisms → cellular organisms → Bacteria	2671	Open in IMG/M
3300006854\|Ga0075425_101229513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	851	Open in IMG/M
3300006881\|Ga0068865_101660965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_68_12	575	Open in IMG/M
3300006904\|Ga0075424_100665021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1112	Open in IMG/M
3300006904\|Ga0075424_101347134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	758	Open in IMG/M
3300007076\|Ga0075435_100527172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1022	Open in IMG/M
3300007076\|Ga0075435_100664109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	905	Open in IMG/M
3300009012\|Ga0066710_102124570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	824	Open in IMG/M
3300009012\|Ga0066710_102371848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	770	Open in IMG/M
3300009089\|Ga0099828_10235240	All Organisms → cellular organisms → Bacteria	1640	Open in IMG/M
3300009137\|Ga0066709_100828811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1343	Open in IMG/M
3300009147\|Ga0114129_10118360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3649	Open in IMG/M
3300009147\|Ga0114129_12344805	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300009818\|Ga0105072_1024274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1113	Open in IMG/M
3300010039\|Ga0126309_10151877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1245	Open in IMG/M
3300010039\|Ga0126309_11239565	Not Available	514	Open in IMG/M
3300010040\|Ga0126308_10432148	Not Available	882	Open in IMG/M
3300010044\|Ga0126310_10095569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1788	Open in IMG/M
3300010045\|Ga0126311_10663935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	831	Open in IMG/M
3300010047\|Ga0126382_11336634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	650	Open in IMG/M
3300010325\|Ga0134064_10262773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	643	Open in IMG/M
3300010366\|Ga0126379_11270146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	842	Open in IMG/M
3300010398\|Ga0126383_10301922	All Organisms → cellular organisms → Bacteria	1600	Open in IMG/M
3300010398\|Ga0126383_12524797	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300010398\|Ga0126383_12972238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	554	Open in IMG/M
3300011991\|Ga0120153_1004762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4428	Open in IMG/M
3300012198\|Ga0137364_10425735	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300012198\|Ga0137364_10616141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	818	Open in IMG/M
3300012200\|Ga0137382_11109303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300012201\|Ga0137365_10870718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	658	Open in IMG/M
3300012204\|Ga0137374_10022709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	7065	Open in IMG/M
3300012204\|Ga0137374_10348794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1194	Open in IMG/M
3300012204\|Ga0137374_10459458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	998	Open in IMG/M
3300012285\|Ga0137370_10122989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1481	Open in IMG/M
3300012350\|Ga0137372_10424508	Not Available	1002	Open in IMG/M
3300012360\|Ga0137375_10080020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3410	Open in IMG/M
3300012961\|Ga0164302_10929584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	670	Open in IMG/M
3300012977\|Ga0134087_10230802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	840	Open in IMG/M
3300012984\|Ga0164309_11836305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300012985\|Ga0164308_10572680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	956	Open in IMG/M
3300012989\|Ga0164305_10353691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1107	Open in IMG/M
3300012989\|Ga0164305_11691043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568	Open in IMG/M
3300014150\|Ga0134081_10158994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	747	Open in IMG/M
3300014487\|Ga0182000_10333538	Not Available	646	Open in IMG/M
3300015371\|Ga0132258_11777059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1554	Open in IMG/M
3300015372\|Ga0132256_100101530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2802	Open in IMG/M
3300015374\|Ga0132255_100707937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1496	Open in IMG/M
3300016319\|Ga0182033_11995416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300018027\|Ga0184605_10022269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2556	Open in IMG/M
3300018056\|Ga0184623_10123721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1197	Open in IMG/M
3300018061\|Ga0184619_10243800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	826	Open in IMG/M
3300018076\|Ga0184609_10310484	Not Available	737	Open in IMG/M
3300018433\|Ga0066667_10055262	All Organisms → cellular organisms → Bacteria	2422	Open in IMG/M
3300018433\|Ga0066667_11750648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300018433\|Ga0066667_11843346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300018468\|Ga0066662_10630198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1009	Open in IMG/M
3300018468\|Ga0066662_11310297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	743	Open in IMG/M
3300018482\|Ga0066669_10059357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2467	Open in IMG/M
3300018482\|Ga0066669_10229436	All Organisms → cellular organisms → Bacteria	1449	Open in IMG/M
3300018482\|Ga0066669_10396487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1167	Open in IMG/M
3300018482\|Ga0066669_11191903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	687	Open in IMG/M
3300019356\|Ga0173481_10375303	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300021080\|Ga0210382_10270119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	746	Open in IMG/M
3300021560\|Ga0126371_10416259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1487	Open in IMG/M
3300025910\|Ga0207684_11303752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300025912\|Ga0207707_10375111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1223	Open in IMG/M
3300025928\|Ga0207700_10047038	All Organisms → cellular organisms → Bacteria	3195	Open in IMG/M
3300025932\|Ga0207690_11108196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_68_12	660	Open in IMG/M
3300026067\|Ga0207678_10728859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	873	Open in IMG/M
3300026306\|Ga0209468_1064282	Not Available	1234	Open in IMG/M
3300026316\|Ga0209155_1285582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300026552\|Ga0209577_10010632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8354	Open in IMG/M
3300027748\|Ga0209689_1408002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300027775\|Ga0209177_10054141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1148	Open in IMG/M
3300027907\|Ga0207428_10285574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1224	Open in IMG/M
3300027909\|Ga0209382_10060179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4505	Open in IMG/M
3300028799\|Ga0307284_10176568	Not Available	833	Open in IMG/M
3300028799\|Ga0307284_10210435	Not Available	766	Open in IMG/M
3300028824\|Ga0307310_10166602	Not Available	1025	Open in IMG/M
3300028824\|Ga0307310_10206992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	928	Open in IMG/M
3300028878\|Ga0307278_10010048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4440	Open in IMG/M
3300028880\|Ga0307300_10321963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300028881\|Ga0307277_10241693	Not Available	796	Open in IMG/M
3300028885\|Ga0307304_10602140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300030903\|Ga0308206_1131168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300031716\|Ga0310813_11836768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	570	Open in IMG/M
3300031938\|Ga0308175_101408208	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300032009\|Ga0318563_10719032	Not Available	536	Open in IMG/M
3300032074\|Ga0308173_10588321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1007	Open in IMG/M
3300033412\|Ga0310810_11055259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	684	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.97%
Host-Associated	Host-Associated	15.03%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.70%
Plants	Host-Associated → Plants	15.03%
Aquatic	Environmental → Aquatic	3.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.46%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.27%
Sediment	Environmental → Aquatic → Sediment	2.61%
Roots	Host-Associated → Plants → Roots	1.31%
Freshwater	Environmental → Aquatic → Freshwater	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.90%
Loam	Environmental → Terrestrial → Soil → Loam	9.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.19%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.61%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.31%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.31%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.65%
Sand	Environmental → Terrestrial → Soil → Sand	0.65%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	30.72%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.41%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.19%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.61%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.31%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.31%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.31%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.65%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.65%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	22.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.11%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.19%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.92%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.27%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.31%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.31%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.31%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.31%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.65%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.65%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.65%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.65%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.65%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459023	Grass soil microbial communities from Rothamsted Park, UK - FA3 (control condition)	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011991	Permafrost microbial communities from Nunavut, Canada - A34_65cm_12M	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FA3_00827940	2170459023	Grass Soil	KELEAEAERGRSPRTPLLVLTGVSVVIGVIFAVLVAIALVLYFAYGGK
ICChiseqgaiiDRAFT_02029132	3300000033	Soil	MEQPHPIEKTKELAAEADRGRSPRTPLLAITGISVVVGVAFVILVTITLVLYFVYGGK*
JGI10216J12902_1002541655	3300000956	Soil	MAHPHPHPVEKIKELEAEAERGRSPRTPLLALTGITLLLAIIFAILVTITLVLYFVYGGK
JGI10216J12902_1016541771	3300000956	Soil	MAHPVEKIKELEAEADRGRSPRTPLLAVTGVTIVISVIFAVLVTVALILYFAYGGK*
JGI10216J12902_1021323173	3300000956	Soil	MDMPHPVEKVKELEAEAERGRSPRTPLIALGGVTVFVGVIFAVLLTVALVLYFAYGGK*
JGI10216J12902_1028924712	3300000956	Soil	MAHPVEKVKELEAEAERGRSPRTPLIALTGVTLVISVIFAVLVTVALILYFAYGGK*
JGI10216J12902_1033324662	3300000956	Soil	MAHPVEKVKELEAEAERGRSPRTPLLAITGVTVVIGVIFAVLLTVALILYFAYGGK*
JGI10216J12902_1046260483	3300000956	Soil	MVHQPHPVEKAKDLAAEAERGRSPRTPLLALTGVTIALSVIFTVLVTVALVLYFVYGGK*
JGI10216J12902_1048320512	3300000956	Soil	MAHPHPVEKIKELEAEAERGRSPRTPLLALTGVTVVISVIFAVLVTVALILYFAYGGK*
JGI10216J12902_1162237132	3300000956	Soil	MVHQPHPVEKAKDLAAEVERGRSPRTPLLVLTGVTIAISILFAVLVTVALVLYFVYGGK*
C688J35102_1208459411	3300002568	Soil	MAHPVEKVKELEAEAERGRSERTPLIALTGVTVAIGIVVAIVVAVGLV
C688J35102_1209445444	3300002568	Soil	MAHPVEKIKELEAEADRGRSPRTPLLALTGVTVVVGVIFAVLVTVALVLYFAYGGK*
Ga0062593_1003502192	3300004114	Soil	MPDLHPVEKIKELEAEADRGRSPRTPLLALTGVTVVVGVIFAVLVTVALVLYFAYGGK*
Ga0062593_1012382231	3300004114	Soil	MAHPVEKIKELEAEAERGRSPRTPLIMLTGITAVIAVIFAVLLAVALILYFAYGGK*
Ga0062593_1013803661	3300004114	Soil	EQPHPVEKTKELAAEADRGRSPRTPLLAITGISLVVGVAFAILVTITLVLYFVYGGK*
Ga0062590_1001901362	3300004157	Soil	MEQPHPVEKTKELAAEADRGRSPRTPLLAITGISLVVGVAFAILVTITLVLYFVYGGK*
Ga0062595_1001619522	3300004479	Soil	MAHPVEKVKALEAEAERGRSPRTPLLAITGVTVVIGVIFAVLVTVALILYFAYGGK*
Ga0062595_1004798442	3300004479	Soil	MAHPHPVEKIKELEAEAERGRSPRTPLIALTGVTVAIGIVVAIVVAVGLVLYYAYGGK*
Ga0062594_1001445063	3300005093	Soil	MPHPVEKIKALEAEAERGRSPRTPLIALGGVTVVIGVIFAVLVAVALILYFAYGGK*
Ga0062594_1002328012	3300005093	Soil	MEQPHPVEKTKELAAEVDRGRSPRTPLLAITGISLVVGVAFAILLTITLVLYFVYGGK*
Ga0062594_1023836311	3300005093	Soil	MAHPHPIEKIKELEAEADRGRSPRTPLLALTGVTVFIGVIFAVLLAVALVVYFAYGGK*
Ga0062594_1031687982	3300005093	Soil	PVETAKDLAAEADRGRSPRTPLIAITGVTLFLGVIFVIMLAAALTLYFVYGGK*
Ga0066672_104891562	3300005167	Soil	KDVAGAATHPVETVKDLAAEAERGRSPRTPLLALTGVTLILSVIFAILVTVALVLYFVYGGK*
Ga0066679_103798191	3300005176	Soil	MVHPVEKLKDLEAEAERGRSPRTPLIALTGITVVISIIFAILVTIALVLYFAYGGK*
Ga0066690_104105252	3300005177	Soil	MVHPVEKTKDLAAEAERGRSPRTPLIALTGVTVLISIIFAVLVTVALVLYFAYGGK*
Ga0066688_105815112	3300005178	Soil	TVKALEREAEEGRSPRTPLIALTGVTLFVGVIFVVLVTITLVLYFVYGGK*
Ga0066685_104748982	3300005180	Soil	MVHPVEKLKELEAEAERGRSPRTPLLALTGVTVLVSVIFAVLVTVALVLYFAYGGK*
Ga0066671_100424182	3300005184	Soil	MVHPHPVEKIKQLEAEAERGRSPRTPLIALTGITVLISVIFAVLVTVTLVLYFAYGGK*
Ga0066676_107553832	3300005186	Soil	MPDLHPVEKIKELEAEAERGRSPRTPLLALTGVTVVIGVIFAVLVAIALVLYFAYGGK*
Ga0066388_1013644843	3300005332	Tropical Forest Soil	MPHPVQKIKELEAEAERGRSPRTPLLALTGVTAVVGVIFAVVVTVALILYFAYGGK*
Ga0066388_1025237292	3300005332	Tropical Forest Soil	MEQPHPIEKTKELAAEVDRGRSPRTPLLAITGVAIFVGVIFAVLVTIALVLYFVYGGK*
Ga0070675_1010758002	3300005354	Miscanthus Rhizosphere	MAHPVEKVKALEAEAERGRSPRTPLLAITGVTIVVAAIFAVLVTVALILYFAYGGK*
Ga0070709_115439762	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	NHHCGYDRRMAHPVEKVKALEAEAERGRSPRTPLLAITGVTIVVGAIFAVLVTVALILYFAYGGK*
Ga0070713_1000839002	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAHPVEKVKELEAEAQRGRSPRTPLIALTGVTVAIGIVVAIVIAVGLVLYYAYGGK*
Ga0066681_104726932	3300005451	Soil	MADLHPVEKIKELEAEAERGRSPRTPLLALTGVTVLISVIFAVLVTVALILYFAYGGK*
Ga0066681_105049452	3300005451	Soil	MVHPVEKIKALEAEAERGRSPRTPLLALTGVTMLISVIFAVLVTVALVLYFVYGGK*
Ga0066681_107425541	3300005451	Soil	MAHPVEKIKELEAEAERGRSPRTPLLALTGVTVVIGVFFAVLVAIALVLYFAYGGK*
Ga0070663_1017843211	3300005455	Corn Rhizosphere	ALEAEAERGRSPRTPLLAITGVTIVVAAIFAVLVTVALILYFAYGGK*
Ga0070681_112492652	3300005458	Corn Rhizosphere	KIKALEAEAERGRSPRTPLIALGGVTVVIGVIFAVLVAVALILYFAYGGK*
Ga0073909_101632862	3300005526	Surface Soil	MAHPVEKVKALEAEAERGRSPRTPLLAITGVTIVVGAIFAVLVMVALILYFAYGGK*
Ga0066697_102126971	3300005540	Soil	KALEREAEEGRSPRTPLIALTGVTLFVGVIFAIVVTIALVLYFVYGGK*
Ga0066695_101872332	3300005553	Soil	MAHPVEKIKELEAEAERGRSPRTPLLVLTGVTVVISVLFAMLVAIALVLYF
Ga0066698_108013842	3300005558	Soil	MAHPVEKIKELEAEAERGRSPRTPLLALTGVTVVVGVIFAVLVTIALILYFAYGGK*
Ga0066670_105874732	3300005560	Soil	MAHPVEKVKELEAEAERGRSPRTPLIALTGVTVAIGIVVAIVVAVGLVLYYAYGGK*
Ga0066703_108058502	3300005568	Soil	HPVEKTKDLAAEAERGRSPRTPLIALTGVTVLISIIFAVLVTVALVLYFAYGGK*
Ga0068854_1020524441	3300005578	Corn Rhizosphere	MPHPVEKIKALEAEAERGRSPRTPLIALGGVTVVIGVIFAVLVAVALILYFAYGG
Ga0066654_101327692	3300005587	Soil	MPMVHPVEKIKDLEAEAERGRSPRTPLIALTGVTVIISIIFAVLVTVALVLYFAYGGK*
Ga0066654_103957172	3300005587	Soil	MVHPHPVEKIKQLEAEAERGRSPRTPLLALTGITVLISVIFAVLVTVTLVLYFAYGGK*
Ga0070702_1004349212	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MPQPVEKIKELEAEAERGRSPRTPLIALTGVTVAIGIVVAIVVAVGLVLYYAYGGK*
Ga0066903_1001035412	3300005764	Tropical Forest Soil	MAHPHPHPHPHPVEKIKELEAEAERGRSPRTPLLVLTGVTAFIGVIFAVLLAIALILYFAYGGK*
Ga0066903_1001382463	3300005764	Tropical Forest Soil	VAHPHMPHPHPVERVKELEAEAERGRSPRTPLILLGGVTVFVSVIFAVLVTVAMVLYFAYGGK*
Ga0081539_100285752	3300005985	Tabebuia Heterophylla Rhizosphere	MPDVHPVEKTKELAAEVDRGRSPRTPLLALTGVTVVIGVILALLVTIGLVLYFAYGGT*
Ga0075365_101588612	3300006038	Populus Endosphere	MEQPHPVEKTKELAAEVDRGRSPRTPVLAITGITLVVGVAFAILVTIALVLYFVYGGK*
Ga0066652_1003398971	3300006046	Soil	MAHPHPVEKIKELEAEADRGRSPRTPLLALTGVTVLISVIFAVLVTVALILYFAYGGK*
Ga0066652_1007784622	3300006046	Soil	MAHPVEKVKELEAEAERGRSERTPLIALTGVTVAIGIVVAIVVAVGLVLYYAYGGK*
Ga0066652_1016673052	3300006046	Soil	MAHPVEKIKELEAEAERGRSPRTPLLALTGVTIVISVIFAVLLAVALVLYFAYGGK*
Ga0075364_110698351	3300006051	Populus Endosphere	VEKTKELAAEVDRGRSPRTPLLAITGITLVVGVAFAILVTIALVLYFVYGGK*
Ga0075432_100760152	3300006058	Populus Rhizosphere	MPGLHPVEKIRELEAEADRGRSPRTPLLALTGVMVVVGVIFAVLVTVALVLY
Ga0079222_105211491	3300006755	Agricultural Soil	MPHPVEKIKALEAEAERGRSPRTPLIALGGVTVVIGVIFAVLVAVALILYFAYGGR*
Ga0066653_102305401	3300006791	Soil	MAHPVEKIKELEAEAERGRSPRTPLLALTGVTIVISVIFAVLLAVALVLYFA
Ga0066665_107504531	3300006796	Soil	MVHPVEKLKHLEAEAERGRSPRTPLIALTGVTVLISIIFAILVTIALVLYFAYGGK*
Ga0066660_103504671	3300006800	Soil	DTTKDLAEEAERGASARTPLIALTGVTIAIAVAVALVLAVALILYFTLGGGKNH*
Ga0079220_120665492	3300006806	Agricultural Soil	MAHSHPIEKVKELEAEAERGRSPRTPLLVLGGVTVFIGVIFAVLLAVALILYFAYGGK*
Ga0075421_1001750652	3300006845	Populus Rhizosphere	MPDLHPVEKIRELEAEADRGRSPRTPLLALTGVTVVVGVIFAVLVTVALVLYFAYGGK*
Ga0075425_1012295132	3300006854	Populus Rhizosphere	VEKIKELEAEAERGRSPRTPLLVLTGVTVVVGVIFAALVTVALILYFAYGGK*
Ga0068865_1016609651	3300006881	Miscanthus Rhizosphere	MEQPHPVEKTKELAAEVDRGRSPRTPLLAITGISLVVGVAFAILLTITLVLYFVY
Ga0075424_1006650212	3300006904	Populus Rhizosphere	MAHPVEKIKELEAEAERGRSPRTPLLVLTGVTVVVGVIFAALVTVALILYFAYGGK*
Ga0075424_1013471342	3300006904	Populus Rhizosphere	MPGLHPVEKIRELEAEADRGRSPRTPLLALTGVTVVVGVIFAVLVTVALVLYFAYGGK*
Ga0075435_1005271722	3300007076	Populus Rhizosphere	MAHPVEKIKKLEAEAERGRSPRTPLLVLTGVTVVVGVIFAALVTVALILYFAYGGK*
Ga0075435_1006641092	3300007076	Populus Rhizosphere	MHHPVEKIKALEAEAERGRSPRTPLIALGGVTVVIGVIFAVLVAVALILYFAYGGK*
Ga0066710_1021245702	3300009012	Grasslands Soil	MADPVHTVKDLAAEAERGRSPRTPLLALTGVTLFLAVVFAILLAIALTLYFVYGGK
Ga0066710_1023718482	3300009012	Grasslands Soil	MVHPVEKIKDLEAEAERGRSPRTPLLALTGITVLISIIFAILVTVALVLYFAYGGK
Ga0099828_102352401	3300009089	Vadose Zone Soil	LAAEAERGRSPRTPLIALTGVTLFVSVIFVIVLAIGLSLYFVYGGK*
Ga0066709_1008288112	3300009137	Grasslands Soil	MVHPVEKIKDLEAEAERGRSPRTPLLALTGITVLISIIFAILVTVALVLYFAYGGK*
Ga0114129_101183603	3300009147	Populus Rhizosphere	MAHPHPIEKVKELEAEADRGRSPRTPLLALTGVTVFIGVIFAVLLAVALVVYFAYGGK*
Ga0114129_123448052	3300009147	Populus Rhizosphere	MDPVEKTKGLAAEAERGRSPRTPLLALTGVTAVVAIAFAILVAIALVLYFTYGGK*
Ga0105072_10242743	3300009818	Groundwater Sand	AKDVAHAIEHPVETAKDLAAEAERGRSPRTPLLALTGVTIFVGIAFAILVTIALVLYFAYGGK*
Ga0126309_101518772	3300010039	Serpentine Soil	MADPVEKAKDLAAEADRGRSPRTPLIALTGVTLFIAVAFAILVTVALILYFAYGGK*
Ga0126309_112395651	3300010039	Serpentine Soil	METPKHLIEEAERGRSPRTPLIALTGITMFLAVIFVVLCAIGLVLYFAY
Ga0126308_104321482	3300010040	Serpentine Soil	MAHPHPVEKTKDLAAEVDRGRSPRTPLLAITGITLVVGVAFAILVTIALVLYFVYGGK*
Ga0126310_100955693	3300010044	Serpentine Soil	METPKHLIEEAERGRSPRTPLIALTGITVFLAVIFVVLCAIGLVLYFAYGGK*
Ga0126311_106639351	3300010045	Serpentine Soil	MPDVHPVEKTKELAAEAERGRSPRTPLLALTGVTVFVGIIFAVLVTVALILYFAYGGK*
Ga0126382_113366342	3300010047	Tropical Forest Soil	MLHPVEKIKELEAEAERGRSPRTPLLALTGVTVVISVIFAVLLAVALILYLAYGGK*
Ga0134064_102627731	3300010325	Grasslands Soil	MVMVHPVEKIKDLEAEAERGRSPRTPLIALTGVTVIISIIFAVLVTVALVLYFAYGGK*
Ga0126379_112701461	3300010366	Tropical Forest Soil	KVRVAHPHMPHPHPVERVKELEAEAERGRSPRTPLILLGGVTVFVSVIFAVLVTVAMVLYFAYGGK*
Ga0126383_103019222	3300010398	Tropical Forest Soil	MLHPVEKIKELEAEAERGRSPRTPLLALTGVTVVISVIFAVMLSVAMILYFAYGGK*
Ga0126383_125247971	3300010398	Tropical Forest Soil	MAHPHMPHPHIPHPVERVKDLEAEAERGRSPRTPLILLGGITVFVSVIFAVLVTVAMVLYFAYGGK*
Ga0126383_129722382	3300010398	Tropical Forest Soil	MPHPVEKVKALEAEAERGRSPRTPLLVLGGVTVFVSVIFAVVVTVALILYFAYGGK*
Ga0120153_10047621	3300011991	Permafrost	VEHPVETAKALEREAERGRSPRTPMLAITGITLVLAVIFAILVTIALVLYFAYGGK*
Ga0137364_104257352	3300012198	Vadose Zone Soil	MAHPVEKIKELEAEADRGRSPRTPLLALTGVTVVVGVIFAVLVTVALLLYFAYGGK*
Ga0137364_106161412	3300012198	Vadose Zone Soil	MAHPHPLEKTKELAAEAERGRSPRTPLLVLTGVTAFVAVIFAVLVTVALVLYFAYGGK*
Ga0137382_111093032	3300012200	Vadose Zone Soil	MAHPHPIEKTKDLAAEVERGRSPRTPLLALTGVTLFIGVLFAILVTVALVLYFVYGGK*
Ga0137365_108707182	3300012201	Vadose Zone Soil	MVHPVEKLKELEAEAERGRSPRTPLLALTGVTVLISVIFAILVTVALVLYFAYGGK*
Ga0137374_100227097	3300012204	Vadose Zone Soil	MAHPHPVEKIKELEAEAERGRSPRTPLLALTGVTLLLSVIFAVLVTVALVLYFAYGGK*
Ga0137374_103487942	3300012204	Vadose Zone Soil	MAHPHPVEKTKELAAEAERGRSPRTPLLALTGVTMLIAIVFAVLVTVTLVLYFVYGGK*
Ga0137374_104594582	3300012204	Vadose Zone Soil	EKAKEAAGSAAHVVEAAKDFAAEAERGRSPRTLLIALTGVTLFVGVIFAVLVTVALVLYFAYGGK*
Ga0137370_101229893	3300012285	Vadose Zone Soil	MADLHPVEKIKELEAEAQRGRSPRTPLLALTGVTVLISVIFAVLVTVALILYFAYGGK*
Ga0137372_104245083	3300012350	Vadose Zone Soil	MEHPHPIEKTKDLAAEIDRGRSPRTPLLVLTGVTLFIGVLFAILVTVALALYFVYGGK*
Ga0137375_100800202	3300012360	Vadose Zone Soil	MAHPHPVEKAKDLVAEAERGRSPRTPLLALTGVTLFLSVLFAILVTIALVLYFVYGGK*
Ga0164302_109295842	3300012961	Soil	MAHPVEKIKELEAEAERGRSPRTPLIMLTGVAAVIGVIFAVLLAVALILYFAYG
Ga0134087_102308021	3300012977	Grasslands Soil	MVHPVEKIKDLEAEAERGRSPRTPLIALTGVTVIISIIFAVLVTVALVLYFAYGGK*
Ga0164309_118363052	3300012984	Soil	MAHPVEKIKELEAEAERGRSPRTPLIMLTGVTAVIGVIFAVLLAVALILYFAYGGK*
Ga0164308_105726801	3300012985	Soil	MPQPLEKVKELEAEAERGRSPRTPLIALTGVTVAIGIVVAIVVAVGLVLYYAYGGK*
Ga0164305_103536911	3300012989	Soil	MAHPVEKIKELEAEAERGRSPRTPLIMLTGVTAVIGVIFAVLLAVALILYF
Ga0164305_116910432	3300012989	Soil	MVHPVEKIKELEAEAERGRSPRTPLIMLTGITAVIGVIFAVLLAVALILYFAYGGK*
Ga0134081_101589941	3300014150	Grasslands Soil	MVHPVEKLKELEAEAERGRSPRTPLLALTGVTVLVSVIFAVLVTVAL
Ga0182000_103335383	3300014487	Soil	MAHPHPVEKIKELEAEAERGRSPRTPLLALTGVTVVVGIIFAVLVTVALVLYFAYGGK*
Ga0132258_117770593	3300015371	Arabidopsis Rhizosphere	MAHPVEKIKELEAEAERGRSPRTPLLALTGVTAVVGVIFAVLVTVALILYFAYGGK*
Ga0132256_1001015303	3300015372	Arabidopsis Rhizosphere	MAHPHPIEKVKELEAEAERGRSPRTPLLVLGGVTVFIGVIFAVLLAVALILYFAYGGK*
Ga0132255_1007079372	3300015374	Arabidopsis Rhizosphere	MEQPHPIEKTRELAAEVDRGRSPRTPLLAITGISLVVGVAFAILVTIELVLYFVYGGK*
Ga0182033_119954162	3300016319	Soil	ADMAHPHPIEKVKALEAEAERGRSPRTPVLVLGGVTVFVSVIFAILLAVAMILYFAYGGK
Ga0184605_100222694	3300018027	Groundwater Sediment	MAHPVEKTKELAAEAERGRSPRTPLLLMTGVSVVIAVIFAVLVAVALVLYFAYGGK
Ga0184623_101237212	3300018056	Groundwater Sediment	MANPVETVKNLTAEAERGRSPRTPLIALTGITLFIGVAFAILVTIALVLYFVYGGK
Ga0184619_102438001	3300018061	Groundwater Sediment	PLEKVKDAAEAAAHPVEKAKDLAAEAERGRSPRTPLLVLSGVTLFVGIAFAILVTIALVLYFAYGGK
Ga0184609_103104842	3300018076	Groundwater Sediment	MADPVETVKHLAAEAERGRSPRTPLIALTGVTLFVGIVFAILVTIALVLYFAYGGK
Ga0066667_100552621	3300018433	Grasslands Soil	MVHPVEKLKELEAEAERGRSPRTPLLALTGVTVLVSVIFAVLVTVALVLYFAYGGK
Ga0066667_117506481	3300018433	Grasslands Soil	MADLHPVEKIKELEAEAERGRSPRTPLLALTGVTVLISVIFAVLVTVALILYFAY
Ga0066667_118433462	3300018433	Grasslands Soil	MADPVHTVKDLAAEAERGRSPRTPLLALTGVTLFLSVVFAILLAIALTLYFVYGGK
Ga0066662_106301982	3300018468	Grasslands Soil	MVHPHPVEKIKQLEAEAERGRSPRTPLIALTGITVLISVIFAVLVTVTLVLYFAYGGK
Ga0066662_113102972	3300018468	Grasslands Soil	MVHPVEKLKDLEAEAERGRSPRTPLIALTGITVVISIIFAILVTIALVLYFAYGGK
Ga0066669_100593573	3300018482	Grasslands Soil	MADLHPVEKIKELEAEAERGRSPRTPLLALTGVTVLISVIFAVLVTVALILYFAYGGK
Ga0066669_102294361	3300018482	Grasslands Soil	MVHPVEKIKALEAEAERGRSPRTPLLALTGVTMLISVIFAVLVTVALVLYFVYGGK
Ga0066669_103964871	3300018482	Grasslands Soil	MAHPVEKIKELEAEADRGRSPRTPLLALTGVTVVVGVIFAVLVTVALVLYFAYGGK
Ga0066669_111919032	3300018482	Grasslands Soil	MVHPVEKLKDLEAEAERGRSPRTPLLALTGVTVLVSIIFAILVTVALVLYFAYGGK
Ga0173481_103753032	3300019356	Soil	MEQPHPVEKTKELAAEADRGRSPRTPLLAITGISLVVGVAFAILVTITLVLYFVYGGK
Ga0210382_102701192	3300021080	Groundwater Sediment	ETAKALEHEAAEGSSPRTPLIAITGITLFLGVIFAVLVTIALVLYFAYGGK
Ga0126371_104162592	3300021560	Tropical Forest Soil	VRVAHPHMPHPHPVERVKELEAEAERGRSPRTPLILLGGVTVFVSVIFAVLVTVAMVLYFAYGGK
Ga0207684_113037521	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAHPHPIEKIKELEAEADRGRSPRTPLLALTGVTVFIGVIFAVLLAVALVVYFAYG
Ga0207707_103751111	3300025912	Corn Rhizosphere	MPHPVEKIKALEAEAERGRSPRTPLIALGGVTVVIGVIFAVLVAVALILYFAYGGK
Ga0207700_100470381	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MAHPVEKVKELEAEAERGRSPRTPLIALTGVTVAIGIVVAIVIAVGLVLYYAYGGK
Ga0207690_111081962	3300025932	Corn Rhizosphere	MEQPHPVEKTKELAAEVDRGRSPRTPLLAITGISLVVGVAFAILLTITLVLYFVYGGK
Ga0207678_107288592	3300026067	Corn Rhizosphere	VEKVKALEAEAERGRSPRTPLLAITGVTIVVGAIFAVLVTVALILYFAYGGK
Ga0209468_10642821	3300026306	Soil	MAHPVEKIKELEAEAERGRSPRTPLLALTGVTIVISVIFAVLLAVALVLYFAYGGK
Ga0209155_12855822	3300026316	Soil	MPMVHPVEKIKALEAEAERGRSPRTPLLALTGVTMLISVIFAVLVTVALVLYFVYGGK
Ga0209577_100106326	3300026552	Soil	MVHPVEKTKDLAAEAERGRSPRTPLIALTGVTVLISIIFAVLVTVALVLYFAYGGK
Ga0209689_14080021	3300027748	Soil	DLAAEAERGRSPRTPLLALTGVTLILSMIFAVLVTVALVLYFVYGGK
Ga0209177_100541412	3300027775	Agricultural Soil	MAHSHPIEKVKELEAEAERGRSPRTPLLVLGGVTVFIGVIFAVLLAVALILYFAYGGK
Ga0207428_102855741	3300027907	Populus Rhizosphere	MPGLHPVEKIRELEAEADRGRSPRTPLLALTGVTVVVGVIFAVLVTVALVLYFAYGGK
Ga0209382_100601794	3300027909	Populus Rhizosphere	MPDLHPVEKIRELEAEADRGRSPRTPLLALTGVTVVVGVIFAVLVTVALVLYFAYGGK
Ga0307284_101765682	3300028799	Soil	MAHPHPVEKIKELEAEAERGRSPRTPLLALTGVTVLLSVIFAVLVTVALVLYFAYGGK
Ga0307284_102104351	3300028799	Soil	MAHPHPVEKIKELEAEAERGRSPRTPLLAITGVTVVIGVIFAVLVAVALVLYFAYGGK
Ga0307310_101666021	3300028824	Soil	MAHPHPVEKIKELEAEAERGRSPRTPLLALTGITVLLSAIFAVLVTIALVLYFAYGGK
Ga0307310_102069921	3300028824	Soil	MAHPHPVEKIKELEAEAERGRSPRTPLLAITGITVVMGVIFAVLVTVALVLYFAYGGK
Ga0307278_100100484	3300028878	Soil	MAHPHPVEKTKELAAEAERGRSPRTPLLVLSGVTAVVAVIFAVLVAVALILYFAYGGS
Ga0307300_103219632	3300028880	Soil	KELAAEAERGRSPRTPLLLMTGVSVVIAVIFAVLVAVALVLYFAYGGK
Ga0307277_102416932	3300028881	Soil	MAHPHPVEKIKELEAEAERGRSPRTPLLALTGITVLLSVIFAVLVTVALVLYFAYGGK
Ga0307304_106021402	3300028885	Soil	MAHPHPVEKLKELEAEAERGRSPRTPLLAITGITVVMGVIFAVLVTVALVLYFAYGGK
Ga0308206_11311682	3300030903	Soil	HPVEKTKELAAEVERGRSPRTPLLALTGITLVVGVAFAILVTIALVLYFVYGGK
Ga0310813_118367681	3300031716	Soil	MAHPVEKIKELEAEAERGRSPRTPLLALTGVTGVIGVIFAVLVAVALILYFAYGGK
Ga0308175_1014082082	3300031938	Soil	MAHPHPVEKIKELEAEAERGRSPRTPLLMLGGVTVVVGVIFAILVAVALILYFAYGGK
Ga0318563_107190321	3300032009	Soil	MAHPHPIEKVKALEAEAERGRSPRTPVLVLGGVTVFVSVIFAILLAVAMILYFAYGGK
Ga0308173_105883212	3300032074	Soil	MAHPVEKVKELEAEAERGRSPRTPLIALTGVTVAIGIVVAIVVAVGLVLYYAYGGK
Ga0310810_110552592	3300033412	Soil	IKALEAEAERGRSPRTPLIALGGVTVVIGVIFAVLVAVALILYFAYGGK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045045

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences