Metagenome / Metatranscriptome Family F045128

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F045128
Family Type	Metagenome / Metatranscriptome
Number of Sequences	153
Average Sequence Length	81 residues
Representative Sequence	KASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYLDATADQTENIAQNRQMRRQLERARKGKRR
Number of Associated Samples	132
Number of Associated Scaffolds	153

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.97 %
% of genes near scaffold ends (potentially truncated)	95.42 %
% of genes from short scaffolds (< 2000 bps)	93.46 %
Associated GOLD sequencing projects	126
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.693 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (30.065 % of family members)
Environment Ontology (ENVO)	Unclassified (30.065 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.595 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Mixed	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 83.33% β-sheet: 0.00% Coil/Unstructured: 16.67%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 153 Family Scaffolds
PF02542	YgbB	29.41
PF05977	MFS_3	24.18
PF00583	Acetyltransf_1	4.58
PF01128	IspD	2.61
PF13263	PHP_C	1.96
PF07690	MFS_1	1.31
PF00912	Transgly	0.65
PF02811	PHP	0.65
PF02653	BPD_transp_2	0.65
PF03358	FMN_red	0.65
PF00072	Response_reg	0.65
PF00486	Trans_reg_C	0.65

COG ID	Name	Functional Category	% Frequency in 153 Family Scaffolds
COG0245	2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	Lipid transport and metabolism [I]	29.41
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	24.18
COG0746	Molybdopterin-guanine dinucleotide biosynthesis protein A	Coenzyme transport and metabolism [H]	2.61
COG1207	Bifunctional protein GlmU, N-acetylglucosamine-1-phosphate-uridyltransferase/glucosamine-1-phosphate-acetyltransferase	Cell wall/membrane/envelope biogenesis [M]	2.61
COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	Lipid transport and metabolism [I]	2.61
COG2068	CTP:molybdopterin cytidylyltransferase MocA	Coenzyme transport and metabolism [H]	2.61
COG0744	Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase	Cell wall/membrane/envelope biogenesis [M]	0.65
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	0.65
COG5009	Membrane carboxypeptidase/penicillin-binding protein	Cell wall/membrane/envelope biogenesis [M]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.69 %
Unclassified	root	N/A	1.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.69 %
Unclassified	root	N/A	1.31 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.69 %
Unclassified	root	N/A	1.31 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	67.32 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.31 %
Unclassified	root	N/A	1.31 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	64.71 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.96 %
Unclassified	root	N/A	1.31 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	32.03 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1.96 %
Unclassified	root	N/A	1.31 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.65 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	30.07 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1.31 %
Unclassified	root	N/A	1.31 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.65 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	30.07 %
Unclassified	root	N/A	1.31 %
Peptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	0.65 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.65 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459019\|G14TP7Y01D2JKM	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101428456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1017	Open in IMG/M
3300000956\|JGI10216J12902_120409174	All Organisms → cellular organisms → Bacteria → Terrabacteria group	771	Open in IMG/M
3300002568\|C688J35102_118052672	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300002568\|C688J35102_119606206	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300002568\|C688J35102_120587385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1212	Open in IMG/M
3300002908\|JGI25382J43887_10411575	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300004153\|Ga0063455_101350705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	546	Open in IMG/M
3300004479\|Ga0062595_100461618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	937	Open in IMG/M
3300004479\|Ga0062595_100718611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	806	Open in IMG/M
3300004479\|Ga0062595_101165321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	680	Open in IMG/M
3300004643\|Ga0062591_100318874	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300005093\|Ga0062594_100869865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	846	Open in IMG/M
3300005167\|Ga0066672_10773351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	607	Open in IMG/M
3300005172\|Ga0066683_10328722	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300005176\|Ga0066679_10374970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	931	Open in IMG/M
3300005178\|Ga0066688_10540459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	749	Open in IMG/M
3300005180\|Ga0066685_10388788	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300005186\|Ga0066676_10606467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	742	Open in IMG/M
3300005335\|Ga0070666_10199697	All Organisms → cellular organisms → Bacteria	1407	Open in IMG/M
3300005341\|Ga0070691_11046148	All Organisms → cellular organisms → Bacteria → Proteobacteria	512	Open in IMG/M
3300005367\|Ga0070667_101397541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	656	Open in IMG/M
3300005435\|Ga0070714_101269656	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300005446\|Ga0066686_10961761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	557	Open in IMG/M
3300005447\|Ga0066689_10992866	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300005457\|Ga0070662_101807553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300005458\|Ga0070681_10956219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	776	Open in IMG/M
3300005467\|Ga0070706_101045979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	752	Open in IMG/M
3300005468\|Ga0070707_100472877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1215	Open in IMG/M
3300005471\|Ga0070698_100936161	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300005535\|Ga0070684_100695119	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300005536\|Ga0070697_102089726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300005539\|Ga0068853_100142160	All Organisms → cellular organisms → Bacteria	2155	Open in IMG/M
3300005546\|Ga0070696_101591869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300005558\|Ga0066698_10650797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	703	Open in IMG/M
3300005558\|Ga0066698_10964375	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300005559\|Ga0066700_11110270	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300005560\|Ga0066670_11019931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	506	Open in IMG/M
3300005561\|Ga0066699_10428351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	947	Open in IMG/M
3300005575\|Ga0066702_10941048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	516	Open in IMG/M
3300005578\|Ga0068854_100170897	All Organisms → cellular organisms → Bacteria	1691	Open in IMG/M
3300005578\|Ga0068854_101574326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	598	Open in IMG/M
3300005598\|Ga0066706_10025892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3663	Open in IMG/M
3300006049\|Ga0075417_10412762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	669	Open in IMG/M
3300006358\|Ga0068871_100560434	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300006358\|Ga0068871_101700118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300006604\|Ga0074060_12071800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1034	Open in IMG/M
3300006854\|Ga0075425_100942401	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300009012\|Ga0066710_101657844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	976	Open in IMG/M
3300009089\|Ga0099828_11348922	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300009098\|Ga0105245_10209535	All Organisms → cellular organisms → Bacteria	1875	Open in IMG/M
3300009137\|Ga0066709_100418140	All Organisms → cellular organisms → Bacteria	1865	Open in IMG/M
3300009137\|Ga0066709_103879308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	543	Open in IMG/M
3300009162\|Ga0075423_10379022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1484	Open in IMG/M
3300009174\|Ga0105241_10098772	All Organisms → cellular organisms → Bacteria	2317	Open in IMG/M
3300009818\|Ga0105072_1037167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	911	Open in IMG/M
3300010043\|Ga0126380_12055083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300010336\|Ga0134071_10310945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	792	Open in IMG/M
3300010366\|Ga0126379_13012009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	564	Open in IMG/M
3300010371\|Ga0134125_12427070	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300010396\|Ga0134126_10908362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	990	Open in IMG/M
3300010397\|Ga0134124_11489731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	704	Open in IMG/M
3300012198\|Ga0137364_10344439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1111	Open in IMG/M
3300012199\|Ga0137383_10550019	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300012207\|Ga0137381_11099349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	684	Open in IMG/M
3300012208\|Ga0137376_11326478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	610	Open in IMG/M
3300012285\|Ga0137370_10197411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1179	Open in IMG/M
3300012285\|Ga0137370_10502664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	742	Open in IMG/M
3300012355\|Ga0137369_10116907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2163	Open in IMG/M
3300012922\|Ga0137394_10301738	All Organisms → cellular organisms → Bacteria	1368	Open in IMG/M
3300012925\|Ga0137419_11198471	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300012951\|Ga0164300_10013536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2651	Open in IMG/M
3300012955\|Ga0164298_10093007	All Organisms → cellular organisms → Bacteria	1578	Open in IMG/M
3300012955\|Ga0164298_10186618	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300012957\|Ga0164303_10440242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	817	Open in IMG/M
3300012960\|Ga0164301_11220339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300012960\|Ga0164301_11560829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300012985\|Ga0164308_10850061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	800	Open in IMG/M
3300012985\|Ga0164308_10872164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	790	Open in IMG/M
3300012985\|Ga0164308_11798055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	571	Open in IMG/M
3300012986\|Ga0164304_11365486	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300012989\|Ga0164305_11869054	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300013104\|Ga0157370_11796331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300014157\|Ga0134078_10434754	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300015357\|Ga0134072_10283425	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300015371\|Ga0132258_11045646	All Organisms → cellular organisms → Bacteria	2064	Open in IMG/M
3300017997\|Ga0184610_1305502	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300018028\|Ga0184608_10526282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300018051\|Ga0184620_10122433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	821	Open in IMG/M
3300018066\|Ga0184617_1116607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	760	Open in IMG/M
3300018071\|Ga0184618_10121856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1043	Open in IMG/M
3300018071\|Ga0184618_10287454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	698	Open in IMG/M
3300018465\|Ga0190269_10412262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	841	Open in IMG/M
3300018482\|Ga0066669_12051437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300019269\|Ga0184644_1697252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300019873\|Ga0193700_1037201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	793	Open in IMG/M
3300020002\|Ga0193730_1044514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1284	Open in IMG/M
3300020004\|Ga0193755_1150541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	706	Open in IMG/M
3300020016\|Ga0193696_1026703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1547	Open in IMG/M
3300021078\|Ga0210381_10095538	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300021363\|Ga0193699_10303319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	666	Open in IMG/M
3300021415\|Ga0193694_1019284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	940	Open in IMG/M
3300025903\|Ga0207680_10928883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	623	Open in IMG/M
3300025905\|Ga0207685_10848071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300025910\|Ga0207684_10122974	All Organisms → cellular organisms → Bacteria	2225	Open in IMG/M
3300025910\|Ga0207684_10884324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	752	Open in IMG/M
3300025915\|Ga0207693_10517234	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300025916\|Ga0207663_11049790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	654	Open in IMG/M
3300025926\|Ga0207659_10277250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1370	Open in IMG/M
3300025927\|Ga0207687_11964087	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300025928\|Ga0207700_10944657	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300025933\|Ga0207706_10909405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	743	Open in IMG/M
3300025936\|Ga0207670_10329100	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300026088\|Ga0207641_11137357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	780	Open in IMG/M
3300026523\|Ga0209808_1143744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	935	Open in IMG/M
3300026527\|Ga0209059_1330316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	517	Open in IMG/M
3300026550\|Ga0209474_10584777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	570	Open in IMG/M
3300026552\|Ga0209577_10387245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1013	Open in IMG/M
3300027288\|Ga0208525_1015916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	851	Open in IMG/M
3300027561\|Ga0209887_1005001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3756	Open in IMG/M
3300027821\|Ga0209811_10436933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300027882\|Ga0209590_10607427	Not Available	703	Open in IMG/M
3300028379\|Ga0268266_11842751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	579	Open in IMG/M
3300028705\|Ga0307276_10003452	All Organisms → cellular organisms → Bacteria	2430	Open in IMG/M
3300028708\|Ga0307295_10063741	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300028710\|Ga0307322_10051145	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300028715\|Ga0307313_10189245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	638	Open in IMG/M
3300028717\|Ga0307298_10145381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	687	Open in IMG/M
3300028722\|Ga0307319_10063016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1170	Open in IMG/M
3300028755\|Ga0307316_10259120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	633	Open in IMG/M
3300028771\|Ga0307320_10183923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	815	Open in IMG/M
3300028778\|Ga0307288_10053072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1400	Open in IMG/M
3300028784\|Ga0307282_10047645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1906	Open in IMG/M
3300028791\|Ga0307290_10146947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	863	Open in IMG/M
3300028791\|Ga0307290_10291741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	597	Open in IMG/M
3300028807\|Ga0307305_10109069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1278	Open in IMG/M
3300028819\|Ga0307296_10095455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1591	Open in IMG/M
3300028819\|Ga0307296_10279508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	909	Open in IMG/M
3300028819\|Ga0307296_10454021	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300028819\|Ga0307296_10664461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	570	Open in IMG/M
3300028824\|Ga0307310_10313373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	765	Open in IMG/M
3300028824\|Ga0307310_10545420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M
3300028828\|Ga0307312_10689477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	676	Open in IMG/M
3300028881\|Ga0307277_10198504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	879	Open in IMG/M
3300028881\|Ga0307277_10382522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300028884\|Ga0307308_10500507	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300031093\|Ga0308197_10237070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	641	Open in IMG/M
3300031198\|Ga0307500_10221841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	573	Open in IMG/M
3300031199\|Ga0307495_10077497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	744	Open in IMG/M
3300031226\|Ga0307497_10681633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300031996\|Ga0308176_11892249	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300032180\|Ga0307471_101184228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	929	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.62%
Host-Associated	Host-Associated	13.73%
Engineered	Engineered	0.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.39%
Plants	Host-Associated → Plants	13.73%
Aquatic	Environmental → Aquatic	5.23%
Solid Waste	Engineered → Solid Waste	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.15%
Sediment	Environmental → Aquatic → Sediment	3.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.27%
Freshwater	Environmental → Aquatic → Freshwater	1.31%
Roots	Host-Associated → Plants → Roots	1.31%
Grass	Engineered → Solid Waste → Grass	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.01%
Loam	Environmental → Terrestrial → Soil → Loam	13.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.58%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.58%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.61%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.31%
Sand	Environmental → Terrestrial → Soil → Sand	1.31%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.65%
Composting	Engineered → Solid Waste → Grass → Composting	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.44%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.58%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.27%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.61%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.31%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.31%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.65%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.65%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	30.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.19%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.27%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.27%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.61%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.96%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.31%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.31%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.31%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.65%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.65%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459019	Litter degradation MG4	Engineered	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021415	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s1	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027288	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4MG_01925750	2170459019	Switchgrass, Maize And Mischanthus Litter	MRKMSQAALERQNPELASAVKKMERAGVARDPQRAAQALSRLSREERAAYLDATTEQADAVPMNRQMKRQMERAKKGRRQR
INPhiseqgaiiFebDRAFT_1014284562	3300000364	Soil	QNPALASAVKKMERAGVARDPQRAAQAISRLTREERAAYLDATTEQTDAVPMNRQMKRQMERAKKGRRR*
JGI10216J12902_1204091741	3300000956	Soil	AVKKLERSGVARDPSRAQQALSRLTAEERRAYLDATAEQTETIAQNRQMRRQLERARKSGRRR*
C688J35102_1180526721	3300002568	Soil	KKMERAGVARDPQRAAQALSRLSREERAAYLDATTEQADAVPMNRQMKRQMERAKKGRRR
C688J35102_1196062062	3300002568	Soil	KLMRKASQAALERQNPELASAVKKMERAGVARDPQRAAQALSRLSREERAAYLDATSEQSDAIAMNRQMKRQMERAKKGRRR*
C688J35102_1205873852	3300002568	Soil	ALERQNPELASAVRKMERAGVAKDPQRAAQALSRLSRDERAAYLDATTEQADAAPMNRQMKRQMERAKKGRRR*
JGI25382J43887_104115751	3300002908	Grasslands Soil	LKPIINFLMKLPLVGRLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYLDATVDQTENIAQNRQMRRQLERARKGKRR*
Ga0063455_1013507051	3300004153	Soil	SAVRKMERAGVAKDPQRAAQALSRLSRDERAAYLDATTEQADAAPMNRQMKRQMERAKKGRRR*
Ga0062595_1004616181	3300004479	Soil	QNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYMEATADQTENIAQNRQMRRQLERSRKGKRR*
Ga0062595_1007186111	3300004479	Soil	LIGRLMKRASQAALERQNPELASAVKKLERSGVAKDPMRAQQALSRLSASERQAYLDATADQTENIAQNRQMRRQLERARKGKRR*
Ga0062595_1011653212	3300004479	Soil	PELASAVKKMERAGVAKDPQRAAQALSRLSARERAAYLDATTEQTDAIAQNRQMRRQLERAKKGRRR*
Ga0062591_1003188743	3300004643	Soil	AALERQNPELASAVKKMERAGVARDPQRAAQALSRLSRDERAAYLDATTEQADAVPMNRQMKRQMERAKKGRRR*
Ga0062594_1008698651	3300005093	Soil	RIQNGRYLKPIINFMMKLPLVGRLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYLDATADQTENIAQNRQMRRQLERARKGKRR*
Ga0066672_107733511	3300005167	Soil	ALERQNPELASAVKKMERAGVARDPQRAAQALSRLNAKERAAYLDATADQSDAIAQNRQMRRQLERAKKGRRR*
Ga0066683_103287221	3300005172	Soil	RGMRKMSQAALERQNPELAAAVKKMERAGVARDPQRAAQALSRLSREERAAYLDATTEQADAVPMNRQMKRQMERAKKGRRR*
Ga0066679_103749702	3300005176	Soil	TGLMKVPLLGRLMKKASQAALERQNPELASAVKKMERAGVAKDPQRAAQALSRLSRDERQAYLDATVEQSDAIAQNRQMRRQLERAKKGRRR*
Ga0066688_105404592	3300005178	Soil	RQNPELASAVKKMERAGVAKDPQRAAQALSRLSREERQAYLDATVEQSDAVAQNRQMRRQLERAKKGRRR*
Ga0066685_103887883	3300005180	Soil	KKLERSGVARDPMRAQQALSRLSPSERQAYMDATADQTENIAQNRQMRRQLERARKGKRR
Ga0066676_106064672	3300005186	Soil	ELASAVKKMERAGVARDPQRAAQALSRLSREERAAYLDATTEQSDAMPMNRQMKRQMERAKKGRRR*
Ga0070666_101996971	3300005335	Switchgrass Rhizosphere	KKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYMDATADQTENVAQNRQMRRQLERARKGKRR*
Ga0070691_110461481	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	YLKPIVGVLMKLPLVGKMMRKASQAALERQNPELASAVKKMERAGVARDPQRAAQALSRLNAKERAAYLDATADQSDAIAQNRQMRRQLERAKKGRRR*
Ga0070667_1013975412	3300005367	Switchgrass Rhizosphere	IIAGLMKLPLIGGLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYMDATADQTENVAQNRQMRRQLERARKGKRR*
Ga0070714_1012696562	3300005435	Agricultural Soil	VKKMERAGVARDPQRAAQALSRLSREERAAYLDATTEQADAVPMNRQMKRQMERAKKGRRR*
Ga0066686_109617612	3300005446	Soil	QAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYLDATADQTENIAQNRQMRRQLERARKGKRR*
Ga0066689_109928662	3300005447	Soil	LKPIINLLMRLPLVGRLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYLDATADQTENIAQNRQMRRQLERARKGKRR*
Ga0070662_1018075531	3300005457	Corn Rhizosphere	AALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYMDATADQTENVAQNRQMRRQLERARKGKRR*
Ga0070681_109562192	3300005458	Corn Rhizosphere	GRYLKPIINFLMKLPLVGRLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYLDATADQTENIAQNRQMRRQLERARKGKRR*
Ga0070706_1010459792	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	SQAALERQNPELAAAVKKMERAGVARDPQRAAQALSRLSREERAAYLDATTEQSDAIPMNRQMKRQMERAKKGRRR*
Ga0070707_1004728771	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VKKMERAGVARDPQRAAQALSRLNARERAAYLEATTEQTDAIAQNRQMRRQLERAKKGRRR*
Ga0070698_1009361611	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	KPIITGLMKLPLVGRLMKRASQAALERQNPELASAVKKMERAGVARDPQRAAQALSRLNARERAAYLEATTEQTDAIAQNRQMRRQLERAKKGRRR*
Ga0070684_1006951193	3300005535	Corn Rhizosphere	MRKMSQAALERQNPELASAVKKMERAGVARDPQRAAQALSRLSREERAAYLDATTEQADAVPMNRQMKRQMERAKKGRRK*
Ga0070697_1020897261	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	KLERSGVARDPMRAQQALSRLSASERQAYMDATADQTENIAQNRQMRRQLERARKGKRR*
Ga0068853_1001421604	3300005539	Corn Rhizosphere	GGLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYMDATADQTENIAQNRQMRRQLERSRKGKRR*
Ga0070696_1015918691	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	QNPELASAVKKLERSGVARDPMRAQQALSRLSAAERQAYLDATADQTENIAQNRQMRRQLERARKGKRR*
Ga0066698_106507972	3300005558	Soil	QAALERQNPELASAVKKMERAGVARDPQRAAQALSRLNAKERAAYLDATADQSDAIAQNRQMRRQLERAKKGRRR*
Ga0066698_109643751	3300005558	Soil	ERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYLDATADQGENIAQNRQMRRQLERARKGKRR*
Ga0066700_111102701	3300005559	Soil	LMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYLDATVDQTENIAQNRQMRRQLERARKGKRR*
Ga0066670_110199312	3300005560	Soil	ILTGLMKLPLVGKLMKRASQAALERQNPELASAVKKMERAGVARDPQRAAQALSRLNAKERAAYLDATADQSDAIAQNRQMRRQLERAKKGRRR*
Ga0066699_104283511	3300005561	Soil	PLVGKLMKRASQAALERQNPELASAVKKMERAGVARDPQRAAQALSRLNAKERAAYLDATADQSDAIAQNRQMRRQLERAKKGRRR*
Ga0066702_109410481	3300005575	Soil	ELASAVKKMERAGVARDPQRAAQALSRLSARERAAYLDATTEQSDAIAQNRQMRRQLERAKKGRRR*
Ga0068854_1001708971	3300005578	Corn Rhizosphere	LIGGLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYMDATADQTENVAQNRQMRRQLERARKGKRR*
Ga0068854_1015743261	3300005578	Corn Rhizosphere	KLPLVGKMMRKASQAALERQNPELASAVKKMERAGVARDPQRAAQALSRLNAKERAAYLDATADQSDAIAQNRQMRRQLERAKKGRRR*
Ga0066706_100258921	3300005598	Soil	LMKLPLVGKLMKRASQAALERQNPELASAVKKMERAGVARDPQRAAQALSRLNAKERAAYLDATTEQSDAIAQNRQMRRQLERAKKGRRR*
Ga0075417_104127621	3300006049	Populus Rhizosphere	VRKMERAGVAKDPQRAAQALSRLSRDERAAYLDATTEQADAVPMNRQMKRQMERAKKGRRR*
Ga0068871_1005604341	3300006358	Miscanthus Rhizosphere	LERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYMDATADQTENIAQNRQMRRQLERSRKGKRR*
Ga0068871_1017001182	3300006358	Miscanthus Rhizosphere	RQNPELASAVKKLERSGVARDPMRAQQALSRLSASERAAYMDATADQTENIAQNRQMRRQLERARKQGKRR*
Ga0074060_120718001	3300006604	Soil	RIKGGRYLKPIIAGLMKLPLIGGLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSPSERQAYMDATADQTENIAQNRQMRRQLERARKGKRR*
Ga0075425_1009424013	3300006854	Populus Rhizosphere	RKASQAALERKNPELASAVKKLERSGVAKDPQRAQQALSRLSAEERQAYLDATADQTQSIAQNRQMRRQLERARKGRRR*
Ga0066710_1016578443	3300009012	Grasslands Soil	ALERQNPELASAVKKMERAGVARDPQRAAQALSRLNAKERAAYLDATADQSDAIAQNRQMRRQLERAKKGRRR
Ga0099828_113489221	3300009089	Vadose Zone Soil	KPIINFMMKLPLVGRLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYLDATADQTENIAQNRQMRRQLERARKGKRR*
Ga0105245_102095351	3300009098	Miscanthus Rhizosphere	NFMMKLPLVGRLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERAAYMDATADQTENIAQNRQMRRQLERARKQGKRR*
Ga0066709_1004181404	3300009137	Grasslands Soil	RKASQAALERQNPELASAVKKLERSGVAKDPMRAQQALSRLSAAERQAYLDATAEQTDNIAQNRQMRRQLERARKGKRR*
Ga0066709_1038793082	3300009137	Grasslands Soil	LERQNPELASAVKKMERAGVARDPQRAAQALSRLNAKERAAYLDATADQSDAIAQNRQMRRQLERAKKGRRR*
Ga0075423_103790222	3300009162	Populus Rhizosphere	VTFLMKLPLVGRLMRRASQAALERQNPELASAVKKMERAGVARDPQRAAQAISRLTREERAAYLDATTEQSDAVPMNRQMKRQMERAKKGRRR*
Ga0105241_100987725	3300009174	Corn Rhizosphere	QNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYMDATADQTENIAQNRQMRRQLERSRKGKRR*
Ga0105072_10371673	3300009818	Groundwater Sand	SQAALERQNPELASAVKKLERSGVAKDPQRAQQALSRLSASERQAYLDATANQTEEIAQNRAQRRQLERARKGRRR*
Ga0126380_120550831	3300010043	Tropical Forest Soil	LPLVGRGMKKMSQAALERQNPELASAVKKMERAGVAKDPQRAAQAISRLTREERAAYLDATTEQSDAIPMNRQMKRQMERAKKGRRR*
Ga0134071_103109453	3300010336	Grasslands Soil	AVKKLERSGVAKDPIRAQQALSRLSAAERQAYLDATAEQTDNIAQNRQMRRQLERARKGKRR*
Ga0126379_130120091	3300010366	Tropical Forest Soil	KMERAGVARDPQRAAQALSRLSRDERAAYLDATTEQADAVPMNRQMKRQMERAKKGRRK*
Ga0134125_124270702	3300010371	Terrestrial Soil	MRKMSQAALERQNPELASAVKKMERAGVAKDPQRAAQAISRLSREERAAYLDATTEQADAMPMNRQMKRQMERAKKGRRK*
Ga0134126_109083622	3300010396	Terrestrial Soil	GGKYLKPIVGFLMKLPLVGRLMRKASQAALERQNPELAAAVKKMERAGVARDPQRAAQALSRLSREERAAYLDATTEQSDAIPMNRQMKRQMERAKKGRRR*
Ga0134124_114897311	3300010397	Terrestrial Soil	QNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYLDATADQTENIAQNRQMRRQLERARKGKRR*
Ga0137364_103444391	3300012198	Vadose Zone Soil	PELASAVKKMERAGVARDPQRAAQALSRLSREERAAYLDATTEQADAVPMNRQMKRQMERAKKGRRR*
Ga0137383_105500191	3300012199	Vadose Zone Soil	QNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYLDATVDQTENIAQNRQMRRQLERARKGKRR*
Ga0137381_110993491	3300012207	Vadose Zone Soil	ASAVKKMERAGVVRDPQRAAQALSRLNAKERAAYLDATTEQSDAIAQNRQMRRQLERAKKGRRR*
Ga0137376_113264782	3300012208	Vadose Zone Soil	SQAALERQNPELASAVKKLERSGVAKDPMRAQQALSRLSSSERQAYLDATADQTENIAQNRQMRRQLERARKGKRR*
Ga0137370_101974112	3300012285	Vadose Zone Soil	ERQNPELASAVRKMERAGVAKDPQRAAQALSRLSRDERAAYLDATTEQADAAPMNRQMKRQMERAKKGRRR*
Ga0137370_105026642	3300012285	Vadose Zone Soil	GRLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYLDATADQTENIAQNRQMRRQLERARKGKRR*
Ga0137369_101169075	3300012355	Vadose Zone Soil	LPQTDHRATARLARAALERQNPELASAIRKLERAGVARDPMRAQKAMSTLTAAERQAYLDAAGEQGSFDTPQNRAMRRQYARTKKK*
Ga0137394_103017383	3300012922	Vadose Zone Soil	MRLPLVGRLMRKASQAALERQNPQLASAVKKLERSGVARDPMRAQQALSRLSASERQAYLDATADQTENIAQNRQMRRQLERARKGKRR*
Ga0137419_111984711	3300012925	Vadose Zone Soil	LASAVKKLERSGVARDPMRAQQALSRLSASERQAYMDATADQTENIAQNRQMRRQLERARKGKRR*
Ga0164300_100135361	3300012951	Soil	RLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYMDATADQTENIAQNRQMRRQLERARKGKRR*
Ga0164298_100930071	3300012955	Soil	SAVKKLERSGVARDPMRAQQALSRLSASERAAYMDATADQTENIAQNRQMRRQLERARKQGKRR*
Ga0164298_101866181	3300012955	Soil	ASAVKKLERSGVARDPMRAQQALSRLSASERAAYMDATADQTENIAQNRQMRRQLERARKCKRR*
Ga0164303_104402421	3300012957	Soil	QAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERAAYMDATADQTENIAQNRQMRRQLERARKQGKRR*
Ga0164301_112203391	3300012960	Soil	IINFMMKLPLVGRLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERAAYMDATADQTENLAQNRQMRRQLERARKQGKRR*
Ga0164301_115608292	3300012960	Soil	PLIGGLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYMDATADQTENIAQNRQMRRQLERARKGKRR*
Ga0164308_108500612	3300012985	Soil	YLKPIIAGLMKLPLIGGLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYMDATADQTENIAQNRQMRRQLERARKGKRR*
Ga0164308_108721642	3300012985	Soil	NGRYLKPIINFMMKLPLVGRLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERAAYMDATADQTENIAQNRQMRRQLERARKQGKRR*
Ga0164308_117980552	3300012985	Soil	GRYLKPIIAGLMKLPLIGGLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYMDATADQTENIAQNRQMRRQLERARKGKRR*
Ga0164304_113654862	3300012986	Soil	GGKYLKPIVAFLMKLPLVGKGMRKMSQAALERQNPELASAVKKMERAGVARDPQRAAQALSRLSREERAAYLDATTEQADAVPMNRQMKRQMERAKKGRRR*
Ga0164305_118690542	3300012989	Soil	YLKPIVAFLMKLPLIGRGMRKMSQAALERQNPELASAVKKMERAGVARDPQRAAQALSRLSRDERAAYLDATTEQADAVPMNRQMKRQMERAKKGRRR*
Ga0157370_117963312	3300013104	Corn Rhizosphere	AGLMKLPLIGGLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYMDATADQTENVAQNRQMRRQLERSRKGKRR*
Ga0134078_104347542	3300014157	Grasslands Soil	GRLMKRASQAALERQNPELASAVKKLERSGVAKDPMRAQQALSRLSASERQAYLDATAEQTDNIAQNRQMRRQLERARKGKRR*
Ga0134072_102834252	3300015357	Grasslands Soil	LGRIAGGKYLKPIVAFLMKLPLVGKGMRKMSQAALERQNPELASAVKKMERAGVARDPQRAAQALSRLSREERAAYLDATTEQADAVPMNRQMKRQMERAKKGRRR*
Ga0132258_110456461	3300015371	Arabidopsis Rhizosphere	GKGMRKMSQAALERQNPELASAVKKMERAGVARDPQRAAQALSRLSREERAAYLDATTEQADAVPMNRQMKRQMERAKKGRRR*
Ga0184610_13055022	3300017997	Groundwater Sediment	MKLPLIGRLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYMDATADQTENIAQNRQMRRQLERARKGKRR
Ga0184608_105262821	3300018028	Groundwater Sediment	PELASAVKKLERSGVARDPMRAQQALSRLSASERQAYMDATADQTENIAQNRQMRRQLERARKGKRR
Ga0184620_101224332	3300018051	Groundwater Sediment	KASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYLDATADQTENIAQNRQMRRQLERARKGKRR
Ga0184617_11166071	3300018066	Groundwater Sediment	RGGRYLKPIVAFLIKLPLIGRLMKKASEAALERQNPELASAVKKMERAGVARDPQRAAQALSRLNAKERAAYLDATADQSDAIAQNRQMRRQLERAKKGRRR
Ga0184618_101218562	3300018071	Groundwater Sediment	MMKLPLVGRLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYLDATADQTENIAQNRQMRRQLERARKGKRR
Ga0184618_102874541	3300018071	Groundwater Sediment	KYLKPIINFMMKLPLVGRLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSATERQAYLDATADQTENIAQNRQMRRQLERARKGKRR
Ga0190269_104122622	3300018465	Soil	GGRYLKPIVAFLIKLPLIGRLMKKASEAALERQNPELASAVKKMERAGVARDPQRAAQALSRLNAKERAAYLDATADQSDAIAQNRQMRRQLERAKKGRRR
Ga0066669_120514372	3300018482	Grasslands Soil	ELASAVKKLERSGVARDPMRAQQALSRLSASERQAYLDATADQSENIAQNRQMRRQLERARKGKRR
Ga0184644_16972521	3300019269	Groundwater Sediment	LIGRLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYMDATADQTENIAQNRQMRRQLERARKGKRR
Ga0193700_10372012	3300019873	Soil	VKKLERSGVARDPMRAQQALSRLSASERQAYMDATADQTENIAQNRQMRRQLERARKGKR
Ga0193730_10445142	3300020002	Soil	LERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYLDATAGQTENIAQNRQMRRQLERARKGKRR
Ga0193755_11505411	3300020004	Soil	IKGGRYLKPIIAGLRKLPLIGGLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYMDATADQTENIAQNRQMRRQLERARKGKRR
Ga0193696_10267034	3300020016	Soil	LIGGLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYMDATADQTENIAQNRQMRRQLERARKGKRR
Ga0210381_100955383	3300021078	Groundwater Sediment	IVNFLMRLPLVGRLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYLDATADQTENIAQNRQMRRQLERARKGKRR
Ga0193699_103033191	3300021363	Soil	GRIQGGRYLKPIINFMMKLPLVGRLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYLDATADQTENIAQNRQMRRQLERARKGKRR
Ga0193694_10192841	3300021415	Soil	GGLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYMDATADQTENIAQNRQMRRQLERARKGKRR
Ga0207680_109288831	3300025903	Switchgrass Rhizosphere	ALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYMDATADQTENVAQNRQMRRQLERARKGKRR
Ga0207685_108480712	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	AVKKLERSGVARDPMRAQQALSRLSASERQAYMDATADQTENIAQNRQMRRQLERARKGKRR
Ga0207684_101229741	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	RLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYLDATVDQTENIAQNRQMRRQLERARKGKRR
Ga0207684_108843241	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	SQAALERQNPELAAAVKKMERAGVARDPQRAAQALSRLSREERAAYLDATTEQSDAIPMNRQMKRQMERAKKGRRR
Ga0207693_105172343	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	GGKYLKPIVAFLMKLPLVGKGMRKMSQAALERQNPELASAVKKMERAGVARDPQRAAQALSRLSREERAAYLDATTEQADAVPMNRQMKRQMERAKKGRRR
Ga0207663_110497902	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	AVKKLERSGVARDPMRAQQALSRLSASERQAYMDATADQTENVAQNRQMRRQLERARKGKRR
Ga0207659_102772502	3300025926	Miscanthus Rhizosphere	MKLPLIGGLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYMDATADQTENVAQNRQMRRQLERARKGKRR
Ga0207687_119640871	3300025927	Miscanthus Rhizosphere	VGKGMRKMSQAALERQNPELASAVKKMERAGVARDPQRAAQALSRLSREERAAYLDATTEQADAVPMNRQMKRQMERAKKGRRK
Ga0207700_109446573	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	AVKKMERAGVARDPQRAAQALSRLSREERAAYLDATTEQADAVPMNRQMKRQMERAKKGRRR
Ga0207706_109094052	3300025933	Corn Rhizosphere	IKGGRYLKPIIAGLMKLPLIGGLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYMDATADQTENVAQNRQMRRQLERARKGKRR
Ga0207670_103291001	3300025936	Switchgrass Rhizosphere	AVKKLERSGVARDPMRAQQALSRLSASERQAYMDATADQTENIAQNRQMRRQLERSRKGKRR
Ga0207641_111373571	3300026088	Switchgrass Rhizosphere	LMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYMDATADQTENIAQNRQMRRQLERSRKGKRR
Ga0209808_11437442	3300026523	Soil	GRYLKPILTGLMKLPLVGKLMKRASQAALERQNPELASAVKKMERAGVARDPQRAAQALSRLNAKERAAYLDATADQSDAIAQNRQMRRQLERAKKGRRR
Ga0209059_13303162	3300026527	Soil	ELASAVKKMERAGVARDPQRAAQALSRLSARERAAYLDATTEQSDAIAQNRQMRRQLERAKKGRRR
Ga0209474_105847772	3300026550	Soil	GRIQGGRYLKPILAGLMKLPLVGKLMKRASQAALERQNPELASAVKKMERAGVARDPQRAAQALSRLNAKERAAYLDATADQSDAIAQNRQMRRQLERAKKGRRR
Ga0209577_103872452	3300026552	Soil	ASQAALERQNPELASAVKKMERAGVARDPQRAAQALSRLNAKERAAYLDATADQSDAIAQNRQMRRQLERAKKGRRR
Ga0208525_10159162	3300027288	Soil	MHQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYMDATADQTENIAQNRQMRRQLERARKGKRR
Ga0209887_10050016	3300027561	Groundwater Sand	SQAALERQNPELASAVKKLERSGVAKDPQRAQQALSRLSASERQAYLDATANQTEEIAQNRAQRRQLERARKGRRR
Ga0209811_104369331	3300027821	Surface Soil	QAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERAAYMDATADQTENIAQNRQMRRQLERARKQGKRR
Ga0209590_106074271	3300027882	Vadose Zone Soil	KKASQAALERQNPELASAVKKMERAGVAKDPQRAAQAISRLSREERQAYLDATVEQSDAIAQNRQMRRQLERARKGKRR
Ga0268266_118427511	3300028379	Switchgrass Rhizosphere	AALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYMDATADQTENVAQNRQMRRQLERARKGKRR
Ga0307276_100034521	3300028705	Soil	GRLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYLDATADQTENIAQNRQMRRQLERARKGKRR
Ga0307295_100637413	3300028708	Soil	KPIVNFLMRLPLVGRLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYLDATADQTENIAQNRQMRRQLERARKGKRR
Ga0307322_100511451	3300028710	Soil	YLKPIVNFLMRLPLVGRLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYLDATADQTENIAQNRQMRRQLERARKGKRR
Ga0307313_101892451	3300028715	Soil	PELASAVKKLERSGVARDPMRAQQALSRLSSSERQAYLDATADQTENIAQNRQMRRQLERARKGKRR
Ga0307311_101155212	3300028716	Soil	VKKMERAGVARDPQRAAQALSRLNAKERAAYLDATAEQSDAIAQNRQMRRQLERAKKGRR
Ga0307298_101453812	3300028717	Soil	QAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYLDATADQTENIAQNRQMRRQLERARKGKRR
Ga0307319_100630162	3300028722	Soil	LVGRLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYLDATADQTENIAQNRQMRRQLERARKGKRR
Ga0307316_102591202	3300028755	Soil	RQNPELASAVKKMERAGVARDPQRAAQALSRLNAKERAAYLDATAEQSDAIAQNRQMRRQLERAKKGRRR
Ga0307320_101839231	3300028771	Soil	ASAVKKLERSGVARDPMRAQQALSRLSASERQAYMDATADQTENIAQNRQMRRQLERARKGKRR
Ga0307288_100530721	3300028778	Soil	MRLPLVGRLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYLDATADQTENIAQNRQMRRQLERARKGKRR
Ga0307282_100476451	3300028784	Soil	GRLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSSSERQAYLDATADQTENIAQNRQMRRQLERARKGKRR
Ga0307290_101469472	3300028791	Soil	IKLPLIGRLMKRASQAALERQNPELASAVKKMERAGVARDPQRAAQALSRLNAKERAAYLDATAEQSDAIAQNRQMRRQLERAKKGRRR
Ga0307290_102917412	3300028791	Soil	LMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYLDATAGQTENIAQNRQMRRQLERARKGKRR
Ga0307305_101090692	3300028807	Soil	GRIQGGRYLKPIVAFLIKLPLIGRLMKRASQAALERQNPELASAVKKMERAGVARDPQRAAQALSRLNAKERAAYLDATAEQSDAIAQNRQMRRQLERAKKGRRR
Ga0307296_100954553	3300028819	Soil	VGRLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYLDATADQTENIAQNRQMRRQLERARKGKRR
Ga0307296_102795082	3300028819	Soil	KPIVAFLIKLPLIGRLMKRASQAALERQNPELASAVKKMERAGVARDPQRAAQALSRLNAKERAAYLDATAEQSDAIAQNRQMRRQLERAKKGRRR
Ga0307296_104540211	3300028819	Soil	RGMKKASQAALERQNPELASAVKKLERSGVAKDPMRAQQALSRLSASERQAYLDATAEQTEGIAQNRQMRRQLERARKGRRR
Ga0307296_106644611	3300028819	Soil	LPLVGRLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYMDATADQTENIAQNRQMRRQLERARKGKRR
Ga0307310_103133731	3300028824	Soil	KASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSSSERQAYLDATADQTENIAQNRQMRRQLERARKGKRR
Ga0307310_105454201	3300028824	Soil	LMKLPLVGKLMKKASQAALERQNPELASAVKKMERAGVARDPQRAAQALSRLNAKERAAYLDATAEQSDAIAQNRQMRRQLERAKKGRRR
Ga0307312_106894771	3300028828	Soil	NPELASAVKKLERSGVARDPMRAQQALSRLSSSERQAYLDATADQTENIAQNRQMRRQLERARKGKRR
Ga0307277_101985042	3300028881	Soil	SQAALERQNPELASAVKKMERAGVARDPQRAAQALSRLNAKERAAYLDATAEQSDAIAQNRQMRRQLERAKKGRRR
Ga0307277_103825222	3300028881	Soil	LMKLPLIGRLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYMDATADQTENIAQNRQMRRQLERARKGKRR
Ga0307308_105005072	3300028884	Soil	IQGGRYLKPILNVLMKLPLVGRGMKKASQAALERQNPELASAVKKLERSGVAKDPMRAQQALSRLSASERQAYLDATAEQTEGIAQNRQMRRQLERARKGRRR
Ga0308197_102370701	3300031093	Soil	LKPIINFLMKLPLVGRLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYLDATADQTENIAQNRQMRRQLERARKGKRR
Ga0307500_102218412	3300031198	Soil	QAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYMDATADQTENIAQNRQMRRQLERARKGKRR
Ga0307495_100774971	3300031199	Soil	GRLMKKASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERAAYMDATADQTENIAQNRQMRRQLERARKGKRR
Ga0307497_106816331	3300031226	Soil	ERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYMDATADQTENIAQNRQMRRQLERARKGKRR
Ga0308176_118922492	3300031996	Soil	VAFLMKLPLVGKGMRRMSQAALERQNPELASAVKKMERAGVARDPQRAAQALSRLSREERAAYLDATTEQADAVPMNRQMKRQMERAKKGRRR
Ga0307471_1011842282	3300032180	Hardwood Forest Soil	KASQAALERQNPELASAVKKLERSGVARDPMRAQQALSRLSASERQAYLDATVDQTENIAQNRQMRRQLERARKGKRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045128

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences