NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F045184

Metagenome Family F045184

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F045184
Family Type Metagenome
Number of Sequences 153
Average Sequence Length 74 residues
Representative Sequence MSTTAGYVNAPELAVRTLACAVIKQALSDALDPTTPPDVRRDAEQFLAGDAWFRRWCVAAGMPPVRMITRRHAA
Number of Associated Samples 69
Number of Associated Scaffolds 153

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 75.16 %
% of genes near scaffold ends (potentially truncated) 27.45 %
% of genes from short scaffolds (< 2000 bps) 84.31 %
Associated GOLD sequencing projects 64
AlphaFold2 3D model prediction Yes
3D model pTM-score0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (64.706 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil
(32.026 % of family members)
Environment Ontology (ENVO) Unclassified
(33.333 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(47.712 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 50.00%    β-sheet: 0.00%    Coil/Unstructured: 50.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.58
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 153 Family Scaffolds
PF04879Molybdop_Fe4S4 57.52
PF07969Amidohydro_3 3.92
PF02965Met_synt_B12 1.31
PF05685Uma2 0.65
PF13247Fer4_11 0.65
PF13175AAA_15 0.65
PF01568Molydop_binding 0.65
PF00005ABC_tran 0.65
PF04389Peptidase_M28 0.65

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 153 Family Scaffolds
COG1410Methionine synthase I, cobalamin-binding domainAmino acid transport and metabolism [E] 1.31
COG4636Endonuclease, Uma2 family (restriction endonuclease fold)General function prediction only [R] 0.65

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms64.71 %
UnclassifiedrootN/A35.29 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2038011002|Coalbed1143_GAIGPUK01A5HSMAll Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium505Open in IMG/M
3300001213|JGIcombinedJ13530_101755018Not Available651Open in IMG/M
3300001213|JGIcombinedJ13530_106192066All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium848Open in IMG/M
3300001213|JGIcombinedJ13530_107640765All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium521Open in IMG/M
3300001213|JGIcombinedJ13530_109526532Not Available722Open in IMG/M
3300002446|NAPDCCLC_10006237All Organisms → cellular organisms → Bacteria6554Open in IMG/M
3300003858|Ga0031656_10056869All Organisms → cellular organisms → Bacteria1531Open in IMG/M
3300003858|Ga0031656_10212597Not Available662Open in IMG/M
3300003858|Ga0031656_10226206Not Available638Open in IMG/M
3300004151|Ga0066602_10045240All Organisms → cellular organisms → Bacteria1842Open in IMG/M
3300004155|Ga0066600_10242104All Organisms → cellular organisms → Bacteria798Open in IMG/M
3300004481|Ga0069718_14454808All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium862Open in IMG/M
3300005833|Ga0074472_11142764All Organisms → cellular organisms → Bacteria1702Open in IMG/M
3300006224|Ga0079037_100004659All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi8096Open in IMG/M
3300006224|Ga0079037_100175986All Organisms → cellular organisms → Bacteria1899Open in IMG/M
3300006224|Ga0079037_100420697All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1269Open in IMG/M
3300006224|Ga0079037_100451436All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1226Open in IMG/M
3300006224|Ga0079037_100518369All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1147Open in IMG/M
3300006224|Ga0079037_101287958All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium727Open in IMG/M
3300006224|Ga0079037_101841859Not Available605Open in IMG/M
3300006930|Ga0079303_10266422All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium701Open in IMG/M
3300006930|Ga0079303_10407126Not Available577Open in IMG/M
3300009009|Ga0105105_10397288Not Available768Open in IMG/M
3300009037|Ga0105093_10003254All Organisms → cellular organisms → Bacteria6358Open in IMG/M
3300009081|Ga0105098_10315866All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium754Open in IMG/M
3300009082|Ga0105099_10182610Not Available1194Open in IMG/M
3300009091|Ga0102851_10013952All Organisms → cellular organisms → Bacteria5672Open in IMG/M
3300009091|Ga0102851_10089008All Organisms → cellular organisms → Bacteria2637Open in IMG/M
3300009091|Ga0102851_10258630All Organisms → cellular organisms → Bacteria1674Open in IMG/M
3300009091|Ga0102851_10721111All Organisms → cellular organisms → Bacteria1057Open in IMG/M
3300009091|Ga0102851_10901721All Organisms → cellular organisms → Bacteria954Open in IMG/M
3300009091|Ga0102851_11329253All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium796Open in IMG/M
3300009091|Ga0102851_11560201Not Available738Open in IMG/M
3300009091|Ga0102851_12709044Not Available569Open in IMG/M
3300009091|Ga0102851_13451754Not Available507Open in IMG/M
3300009131|Ga0115027_10114946All Organisms → cellular organisms → Bacteria1578Open in IMG/M
3300009131|Ga0115027_10310586All Organisms → cellular organisms → Bacteria1065Open in IMG/M
3300009131|Ga0115027_10528740Not Available854Open in IMG/M
3300009131|Ga0115027_10937184All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium673Open in IMG/M
3300009167|Ga0113563_10059132All Organisms → cellular organisms → Bacteria → FCB group3292Open in IMG/M
3300009167|Ga0113563_10554509All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1264Open in IMG/M
3300009167|Ga0113563_11173246Not Available893Open in IMG/M
3300009167|Ga0113563_11450496Not Available807Open in IMG/M
3300009167|Ga0113563_11894953Not Available711Open in IMG/M
3300009179|Ga0115028_10030622All Organisms → cellular organisms → Bacteria2492Open in IMG/M
3300009179|Ga0115028_10643763Not Available799Open in IMG/M
3300009455|Ga0114939_10068169All Organisms → cellular organisms → Bacteria1521Open in IMG/M
3300009455|Ga0114939_10093848Not Available1273Open in IMG/M
3300009688|Ga0116176_10000742All Organisms → cellular organisms → Bacteria26458Open in IMG/M
3300009696|Ga0116177_10374831Not Available752Open in IMG/M
(restricted) 3300013137|Ga0172375_10159543All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1817Open in IMG/M
3300013232|Ga0170573_10720982All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium975Open in IMG/M
3300013315|Ga0173609_10323234Not Available943Open in IMG/M
3300013315|Ga0173609_10889479All Organisms → cellular organisms → Bacteria1070Open in IMG/M
3300014324|Ga0075352_1288121Not Available519Open in IMG/M
3300025174|Ga0209324_10588868Not Available657Open in IMG/M
3300025682|Ga0209718_1070317All Organisms → cellular organisms → Bacteria1235Open in IMG/M
3300027683|Ga0209392_1006443All Organisms → cellular organisms → Bacteria3452Open in IMG/M
3300027762|Ga0209288_10056162All Organisms → cellular organisms → Bacteria1188Open in IMG/M
3300027843|Ga0209798_10112093All Organisms → cellular organisms → Bacteria1384Open in IMG/M
3300027871|Ga0209397_10072455All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1365Open in IMG/M
3300027871|Ga0209397_10226450All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium870Open in IMG/M
3300027871|Ga0209397_10334270All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium730Open in IMG/M
3300027885|Ga0209450_10002607All Organisms → cellular organisms → Bacteria9098Open in IMG/M
3300027885|Ga0209450_10107405All Organisms → cellular organisms → Bacteria1864Open in IMG/M
3300027885|Ga0209450_10108329All Organisms → cellular organisms → Bacteria1857Open in IMG/M
3300027887|Ga0208980_10628644Not Available611Open in IMG/M
3300027890|Ga0209496_10503849Not Available643Open in IMG/M
3300027897|Ga0209254_10007924All Organisms → cellular organisms → Bacteria9801Open in IMG/M
3300027897|Ga0209254_10100998All Organisms → cellular organisms → Bacteria2421Open in IMG/M
3300027897|Ga0209254_10156630All Organisms → cellular organisms → Bacteria1860Open in IMG/M
3300027897|Ga0209254_10539399All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium835Open in IMG/M
3300027899|Ga0209668_10551804Not Available767Open in IMG/M
3300027899|Ga0209668_11003020Not Available563Open in IMG/M
3300027900|Ga0209253_10072782All Organisms → cellular organisms → Bacteria2833Open in IMG/M
3300027900|Ga0209253_10164186All Organisms → cellular organisms → Bacteria1791Open in IMG/M
3300027900|Ga0209253_10748596Not Available700Open in IMG/M
3300027902|Ga0209048_10027572All Organisms → cellular organisms → Bacteria4846Open in IMG/M
3300028176|Ga0268284_1181276Not Available502Open in IMG/M
3300028178|Ga0265593_1158765Not Available577Open in IMG/M
3300030114|Ga0311333_11058493All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium689Open in IMG/M
3300031834|Ga0315290_10022500All Organisms → cellular organisms → Bacteria4900Open in IMG/M
3300031834|Ga0315290_10119641All Organisms → cellular organisms → Bacteria2239Open in IMG/M
3300031834|Ga0315290_10946563Not Available728Open in IMG/M
3300031873|Ga0315297_10963625Not Available707Open in IMG/M
3300031997|Ga0315278_10238419All Organisms → cellular organisms → Bacteria1876Open in IMG/M
3300032143|Ga0315292_10750066Not Available819Open in IMG/M
3300032143|Ga0315292_10934192All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium722Open in IMG/M
3300032164|Ga0315283_10119865All Organisms → cellular organisms → Bacteria2778Open in IMG/M
3300032173|Ga0315268_10325381All Organisms → cellular organisms → Bacteria1493Open in IMG/M
3300032256|Ga0315271_10220067All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1529Open in IMG/M
3300032256|Ga0315271_10917950Not Available755Open in IMG/M
3300032275|Ga0315270_10250157All Organisms → cellular organisms → Bacteria1100Open in IMG/M
3300032397|Ga0315287_10881187All Organisms → cellular organisms → Bacteria1048Open in IMG/M
3300032397|Ga0315287_11069541All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium936Open in IMG/M
3300032397|Ga0315287_11223176All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium863Open in IMG/M
3300032516|Ga0315273_11013984All Organisms → cellular organisms → Bacteria1061Open in IMG/M
3300032516|Ga0315273_12045876Not Available678Open in IMG/M
3300032516|Ga0315273_12258192Not Available636Open in IMG/M
3300033406|Ga0316604_10088451All Organisms → cellular organisms → Bacteria1619Open in IMG/M
3300033408|Ga0316605_10123860All Organisms → cellular organisms → Bacteria2049Open in IMG/M
3300033408|Ga0316605_10164727All Organisms → cellular organisms → Bacteria1821Open in IMG/M
3300033408|Ga0316605_10201541All Organisms → cellular organisms → Bacteria1673Open in IMG/M
3300033408|Ga0316605_10294862All Organisms → cellular organisms → Bacteria1419Open in IMG/M
3300033408|Ga0316605_10583873All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1041Open in IMG/M
3300033408|Ga0316605_11005709Not Available800Open in IMG/M
3300033408|Ga0316605_11120756All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium758Open in IMG/M
3300033408|Ga0316605_11416432Not Available674Open in IMG/M
3300033413|Ga0316603_10111789Not Available2183Open in IMG/M
3300033413|Ga0316603_10253715All Organisms → cellular organisms → Bacteria1530Open in IMG/M
3300033413|Ga0316603_10337482All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1344Open in IMG/M
3300033413|Ga0316603_10355160All Organisms → cellular organisms → Bacteria1312Open in IMG/M
3300033413|Ga0316603_10497843All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1118Open in IMG/M
3300033413|Ga0316603_11902869All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium563Open in IMG/M
3300033414|Ga0316619_10142854All Organisms → cellular organisms → Bacteria1630Open in IMG/M
3300033414|Ga0316619_11034237Not Available717Open in IMG/M
3300033414|Ga0316619_11872931All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium544Open in IMG/M
3300033416|Ga0316622_100088623All Organisms → cellular organisms → Bacteria3064Open in IMG/M
3300033416|Ga0316622_100497453All Organisms → cellular organisms → Bacteria1388Open in IMG/M
3300033416|Ga0316622_100528777Not Available1347Open in IMG/M
3300033416|Ga0316622_100564372All Organisms → cellular organisms → Bacteria1305Open in IMG/M
3300033416|Ga0316622_100565001All Organisms → cellular organisms → Bacteria → FCB group1304Open in IMG/M
3300033416|Ga0316622_100727162All Organisms → cellular organisms → Bacteria1149Open in IMG/M
3300033416|Ga0316622_101010296All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium971Open in IMG/M
3300033416|Ga0316622_101827057Not Available707Open in IMG/M
3300033418|Ga0316625_100039580Not Available2168Open in IMG/M
3300033418|Ga0316625_101598805All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium622Open in IMG/M
3300033418|Ga0316625_101742212All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium602Open in IMG/M
3300033418|Ga0316625_102494711Not Available522Open in IMG/M
3300033419|Ga0316601_100062982All Organisms → cellular organisms → Bacteria2817Open in IMG/M
3300033419|Ga0316601_100238984All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1624Open in IMG/M
3300033419|Ga0316601_102098515Not Available569Open in IMG/M
3300033433|Ga0326726_11070813Not Available784Open in IMG/M
3300033481|Ga0316600_10192554Not Available1326Open in IMG/M
3300033481|Ga0316600_10499012Not Available844Open in IMG/M
3300033482|Ga0316627_100185422All Organisms → cellular organisms → Bacteria1582Open in IMG/M
3300033482|Ga0316627_101014855All Organisms → cellular organisms → Bacteria806Open in IMG/M
3300033483|Ga0316629_10047183All Organisms → cellular organisms → Bacteria2124Open in IMG/M
3300033483|Ga0316629_10314954All Organisms → cellular organisms → Bacteria1064Open in IMG/M
3300033493|Ga0316631_10306156Not Available638Open in IMG/M
3300033513|Ga0316628_104143325All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium516Open in IMG/M
3300033521|Ga0316616_102363906Not Available710Open in IMG/M
3300033521|Ga0316616_102463883Not Available697Open in IMG/M
3300033521|Ga0316616_103081064All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium628Open in IMG/M
3300033557|Ga0316617_100013856All Organisms → cellular organisms → Bacteria3891Open in IMG/M
3300033557|Ga0316617_100883904All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium864Open in IMG/M
3300033557|Ga0316617_101334523Not Available717Open in IMG/M
3300033557|Ga0316617_101556801Not Available668Open in IMG/M
3300033557|Ga0316617_101860436All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium616Open in IMG/M
3300034056|Ga0373893_038322Not Available637Open in IMG/M
3300034074|Ga0373894_019753All Organisms → cellular organisms → Bacteria945Open in IMG/M
3300034074|Ga0373894_065097Not Available559Open in IMG/M
3300034080|Ga0373897_048780Not Available795Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil32.03%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands13.73%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment11.76%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment10.46%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland6.54%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment3.92%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland3.27%
Sediment SlurryEngineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry2.61%
Anaerobic Digestor SludgeEngineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge1.96%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater1.31%
FreshwaterEnvironmental → Aquatic → Freshwater → Pond → Sediment → Freshwater1.31%
Saline WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water1.31%
Deep SubsurfaceEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface1.31%
SedimentEngineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified → Sediment1.31%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment0.65%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.65%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment0.65%
Coalbed WaterEnvironmental → Aquatic → Freshwater → Groundwater → Coalbed Water → Coalbed Water0.65%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)0.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.65%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.65%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.65%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.65%
SedimentEngineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified → Sediment0.65%
Hydrocarbon Resource EnvironmentsEngineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Hydrocarbon Resource Environments0.65%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2038011002Coalbed microbial communities from New Mexico, USA - 343EnvironmentalOpen in IMG/M
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300002446Oil sands microbial community from Northern Alberta which degrade NaphthalineEngineeredOpen in IMG/M
3300003858Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DIEnvironmentalOpen in IMG/M
3300004151Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 5EnvironmentalOpen in IMG/M
3300004155Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11EnvironmentalOpen in IMG/M
3300004481Combined Assembly of Gp0112041, Gp0112042, Gp0112043EnvironmentalOpen in IMG/M
3300005833Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBKEnvironmentalOpen in IMG/M
3300006224Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaGEnvironmentalOpen in IMG/M
3300006930Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWCEnvironmentalOpen in IMG/M
3300009009Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015EnvironmentalOpen in IMG/M
3300009037Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015EnvironmentalOpen in IMG/M
3300009081Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300009082Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015EnvironmentalOpen in IMG/M
3300009091Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300009131Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1EnvironmentalOpen in IMG/M
3300009167Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)EnvironmentalOpen in IMG/M
3300009179Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1EnvironmentalOpen in IMG/M
3300009455Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Crystal SpringEnvironmentalOpen in IMG/M
3300009688Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_STIC08_MetaGEngineeredOpen in IMG/M
3300009696Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_STIC10_MetaGEngineeredOpen in IMG/M
3300013137 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_11.1mEnvironmentalOpen in IMG/M
3300013232Sediment microbial communities from Acid Mine Drainage holding pond in Pittsburgh, PA, USA ? S1EngineeredOpen in IMG/M
3300013315Sediment microbial communities from Acid Mine Drainage holding pond in Pittsburgh, PA, USA - 1BEngineeredOpen in IMG/M
3300014324Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1EnvironmentalOpen in IMG/M
3300025174Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 3EnvironmentalOpen in IMG/M
3300025682Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS1_MetaG (SPAdes)EngineeredOpen in IMG/M
3300027683Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027762Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027843Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027871Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027885Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)EnvironmentalOpen in IMG/M
3300027887Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 BulkEnvironmentalOpen in IMG/M
3300027890Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027897Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)EnvironmentalOpen in IMG/M
3300027899Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)EnvironmentalOpen in IMG/M
3300027900Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)EnvironmentalOpen in IMG/M
3300027902Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)EnvironmentalOpen in IMG/M
3300028176Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2013_06_06_40mEnvironmentalOpen in IMG/M
3300028178Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2011_5_24_36mEnvironmentalOpen in IMG/M
3300030114I_Fen_E2 coassemblyEnvironmentalOpen in IMG/M
3300031834Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0EnvironmentalOpen in IMG/M
3300031873Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0EnvironmentalOpen in IMG/M
3300031997Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0EnvironmentalOpen in IMG/M
3300032143Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0EnvironmentalOpen in IMG/M
3300032164Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0EnvironmentalOpen in IMG/M
3300032173Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_topEnvironmentalOpen in IMG/M
3300032256Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_topEnvironmentalOpen in IMG/M
3300032275Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottomEnvironmentalOpen in IMG/M
3300032397Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0EnvironmentalOpen in IMG/M
3300032516Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0EnvironmentalOpen in IMG/M
3300033406Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CTEnvironmentalOpen in IMG/M
3300033408Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCTEnvironmentalOpen in IMG/M
3300033413Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCTEnvironmentalOpen in IMG/M
3300033414Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_BEnvironmentalOpen in IMG/M
3300033416Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_CEnvironmentalOpen in IMG/M
3300033418Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_AEnvironmentalOpen in IMG/M
3300033419Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCTEnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033481Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CTEnvironmentalOpen in IMG/M
3300033482Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_CEnvironmentalOpen in IMG/M
3300033483Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_AEnvironmentalOpen in IMG/M
3300033493Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D3_AEnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M
3300033521Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_BEnvironmentalOpen in IMG/M
3300033557Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_BEnvironmentalOpen in IMG/M
3300034056Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A3A4.3EngineeredOpen in IMG/M
3300034074Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A4A4.1EngineeredOpen in IMG/M
3300034080Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A5A4.1EngineeredOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
Coalbed5_25285402038011002Coalbed WaterGPSLEVDMSSAIVCSNAPELAVRTLACAVIKQALSDALDPTTPAGVRRDAEQFLAGDAWFRRWSVAAGMSPVRLISRRHAA
JGIcombinedJ13530_10175501813300001213WetlandMMRSQATYRQVPEMASKTLACAVIKQAVADALNPTQPFDVRRDALEFLSGDDWYRQWCTMAGVKP
JGIcombinedJ13530_10619206613300001213WetlandMLTTVAHAHCPEIAVRSLACAVIKQALVDALDPTTPPDVRHDAEQFLAGDAWFRRWCMAAGIRPTGMISRRYAA*
JGIcombinedJ13530_10764076513300001213WetlandMMRSQATYLHVPGMASKTLACAVIKQALADALDPTQPTDVRQDAIVFLSGDDWYRQWCTMAGLKPVRLISRLVAE*
JGIcombinedJ13530_10952653213300001213WetlandMMRSQATYLHVPEMASKTLACAVIKQALADALNPTQPFDIRRDALEFLSGDDWYRQWCTMAGVKPVRMLSRPISE*
NAPDCCLC_1000623743300002446Hydrocarbon Resource EnvironmentsMSSAADFAPVPEMAVKTLACAVIKQALTDALDPTVPADVRHDAEHFLAGDLWFRRWCAAADLPETRLLSRRYSA*
Ga0031656_1005686913300003858Freshwater Lake SedimentMSSAIVCSNAPEHAVRTLACAVIKQALLDALDPTTPPGVRRDAEQFLAGDAWFRRWSIAAGRSPVRLITRRHAA*
Ga0031656_1021259733300003858Freshwater Lake SedimentMSTAAACANVPELSVRTLACAVIKQALSDALDPTTPLEVRRDAEQFLAGDAWFRRWSVAAGMSPIRLITR
Ga0031656_1022620613300003858Freshwater Lake SedimentMSTAAACANVPELSVRTLACAVIKQALSDALDPTTPPEVRRDAEQFLAGDAWFRRWSVAAGMSPIRLITR
Ga0066602_1004524023300004151FreshwaterMSTAAAYANVPECSVRTLACAVIKQALSDALDPTTPLEVRLDAEQFLAGDTWFRRWSAAAGMRPTHLITRRHAA*
Ga0066600_1024210413300004155FreshwaterWSPCAPPDRGAIEVDMSTAAAYANVPERSVRTLACAVIKQALSDALDPTTPLEVRLDAEQFLAGDTWFRRWSAAAGMRPTHLITRRHAA*
Ga0069718_1445480823300004481SedimentMPTPAASVSSPELAVRSLACAVIKQALLDALDPTVPADIRRDALEFLAGDPWFRRWCAAAGMKPVGMISLRHAA*
Ga0074472_1114276423300005833Sediment (Intertidal)MSSAVAYSDVPALAVKTLACAVIKQALSDALDPTTAPDVRRDAEQFLAGDAWFRRWCIAAGMPPTRLISRRHEV*
Ga0079037_10000465923300006224Freshwater WetlandsMSSAVAYSDAPVLAVKSLACAVIKQALSDALDPTTPPEVRRDAEQFLAGDEWFRRWCTAAGMPQTRLISRRHVV*
Ga0079037_10017598623300006224Freshwater WetlandsMSTTAACRNVPELAVRTLACAVIKQALSDALDPTTHPDVRRDAEQFLAGDAWFRRWCVAAGMQPIRLITRRHAA*
Ga0079037_10042069723300006224Freshwater WetlandsMSTTAAYADCPEIAVKTLACAVIKQALVDALDPTTPPDVRRDAEQFLAGDAWFRRWCVAAGIRPTRMISRRHAA*
Ga0079037_10045143623300006224Freshwater WetlandsMSTTAGYINAPELAVRTLACAVIKQALSDALDPTTPPDVRRDAEQFLAGDAWFRRWCVAAGMPPVRMITRRHAA*
Ga0079037_10051836923300006224Freshwater WetlandsMSIAAACVESPEIAVKTLACAVIKQALVDALDPTTPPDVRRDAEQFLAGDAWFRRWCMAAGIRPTRLISRRFAA*
Ga0079037_10128795823300006224Freshwater WetlandsMSTTAACANVPQLAVRTLACAVIKQALSDALDPTTRPDVRRDAEQFLAGDAWFQRWCVAAGMRPIRLITRRHAA*
Ga0079037_10184185913300006224Freshwater WetlandsMPSVVAYSDVPVPAVKTLACAVIKQALSDALDPTTPPDVRRDAEQFLAGDAWFRRWCMAAGMPPTRLISRRHEV*
Ga0079303_1026642223300006930Deep SubsurfaceMSMTAAYANLPEVAVRTLACAVIKQALADALDPTTPPDVRRDDEQFLAGDAWFRRWSAAAGMRPSRLITRRHAA*
Ga0079303_1040712613300006930Deep SubsurfaceMSTTAGYVNAPELAVRTLACAVIKQALTDALDPTTPTDVRRDAEQFLAGDAWFRRWCMAAGMPPVRMITRRHAA*
Ga0105105_1039728813300009009Freshwater SedimentMSSAIVCSNAPELAVRTLACAVIKQALSDALDPTTPPGVRRDAERFLAGDAWFRRWSVAAGMAPVRLITRRHAA*
Ga0105093_1000325453300009037Freshwater SedimentMSSAIVCSNAPELAVRTLACAVIKQALSDALDPTTPPGVRRDAERFLAGDAWFRRWSVAAGMSPVRLITRRHAA*
Ga0105098_1031586623300009081Freshwater SedimentMSSAIVCSNAPELAVRTLACAVIKQALSDALDPTTPPGVRRDAERFLAGDAWFCRWSVAAGMAPVRLITRRHAA*
Ga0105099_1018261023300009082Freshwater SedimentMSLSVKALACAVIKQALSDALDPTTPPGVRRDAERFLAGDAWFRRWSVAAGMSPVRLITRRHAA*
Ga0102851_1001395223300009091Freshwater WetlandsMSMTAAYANLPEVAVRTLACAVIKQALADALDPTTPPDVRRDAEQFLAGDAWFRRWSVAAGMRPSRLITRRHAA*
Ga0102851_1008900833300009091Freshwater WetlandsMSTTVACAEYPEIAVKTLACAVIKQALVDALDPTTPSEVRRDAEQFLAGDAWFRRWCLAAGIRPTGLITRRYAA*
Ga0102851_1025863023300009091Freshwater WetlandsLAPGFPAGFGPEVDMSSAVAYSDAPVLAVKSLACAVIKQALSDALDPTTPPEVRRDAEQFLAGDEWFRRWCTAAGMPQTRLISRRHVV*
Ga0102851_1072111113300009091Freshwater WetlandsPEVNMPSVVAYSDVPVPAVKTLACAVIKQALSDALDPTTPPDVRRDAEQFLAGDAWFRRWCMAAGMPPTRLISRRHEV*
Ga0102851_1090172123300009091Freshwater WetlandsMSSAVAYSDAPVLAVKTLACAVIKQALSDALDPTNPPEVRRDAEQFLAGDEWFRRWCIAAGMPQTRLISRRHVV*
Ga0102851_1132925313300009091Freshwater WetlandsMSTTAGYVNAPELAVRTLACAVIKQALSDALDPTTPPDVRRDAEQFLAGDAWFRRWCVAAGMPPVRMITRRHAA*
Ga0102851_1156020113300009091Freshwater WetlandsMSTTVAYADCPEIAVKTLACAVIKQALVDALDPTTPPEVRRDAEQFLAGDAWFRRWCVAAGIRPTRMISRRHAA*
Ga0102851_1270904423300009091Freshwater WetlandsMSTTAACANVPQLAVRTLACAVIKQALSDALDPTTRPDVRRDAEQFLAGDAWFQRWCVAAGMRPIRLITRRH
Ga0102851_1345175413300009091Freshwater WetlandsMSTTAAYANAPELAVKTLACAVIKQALSDALDPTTSPDLRRDAEQFLAGDAWFRRWCVAAGLQPVRLISRRHAA*
Ga0115027_1011494623300009131WetlandMWPSAAPAAGATEVDMSTRVAYADCPEIAVKTLACAVIKQALVDALDPMTPSEVRRDAEQFLAGDAWFRRWCMAAGIRPARMISRRYAA*
Ga0115027_1031058623300009131WetlandMSTTAPYANAPELAVKTLACAVIKQALSDALDPTTSPDLRRDAEQFLAGDAWFRRWCVAAGLQPVRLISRRHAA*
Ga0115027_1052874013300009131WetlandMSSAVACSNVPELAVKTLACAVIKQALSDALDPTTPPDVRRDAEQFLAGDAWFRRWCIAAGMPPVRMISRRHAA*
Ga0115027_1093718423300009131WetlandMMQSHAGLNLVPELAAKTLACAVIKQALSDALDPTLPFEVRQDAREFLEGDEWYRQWCAVAGLQPIRLLTRRMAA*
Ga0113563_1005913223300009167Freshwater WetlandsMWPSAAPAAGATEVDMSTRVAYADCPEIAVKTLACAVIKQALVDALDPMTPSEVRRDAEQFLAGDAWFRRWCLAAGIRPARMISRRYAA*
Ga0113563_1055450923300009167Freshwater WetlandsMSSAVAYSDAPVPAVQTLACAVIKQALSDALDPTTPPDVRRDAEQFLAGDAWCRRWCLAAGMPPTRLITRRHAV*
Ga0113563_1117324623300009167Freshwater WetlandsMPMPAGYLHAPELAVRTLACAVIKQALADALDPTTPREVRRDAEQFLAGTAWFRRWCVAAGMPPVRLITRRHAA*
Ga0113563_1145049613300009167Freshwater WetlandsMPSTTAFSHIPELAVKTLACAVIKQALTDALDPTTPENVRQDAQQFLAGDAWFRRWCLAAGMPPTRLITRRHA
Ga0113563_1189495313300009167Freshwater WetlandsMSTAAACANVPELAVRTLACAVIKQALSDALDPTTHPDVRRDAEQFLAGDAWFRRWCAAAGMSPSGLITRRHAA*
Ga0115028_1003062223300009179WetlandMSTTAGYVNAPELAVRTLACAVIKQALTDALDPTTPPDVRRDAEQFLAGDAWFRRWCVAAGMPPVRMITRRHAA*
Ga0115028_1064376323300009179WetlandMSTTAAYADCPEIAVKTLACAVIKQALVDALDPTTPPDVRRDAEQFLAGDAWFRRWCMAAGIRPARMISRRYAA*
Ga0114939_1006816923300009455GroundwaterMSTTAAYVNAPELAVRTLACAVIKQALTDALDPTTPPDVRRDAEQFLAGDAWFRRWCAAAGMPPVRMITRRHAA*
Ga0114939_1009384823300009455GroundwaterMSTAAAYVESPEIAVRTLACAVIKQALVDALDPTTPPDVRRDAEQFLAGDAWFRRWCMAAGIRPTRLISRRYAA*
Ga0116176_1000074243300009688Anaerobic Digestor SludgeLVGIEVAMSADVECASVSEMAVKTLACAVIKQALCDALDPTVPERIRRDAEQFLAGDVRFRRWSAVAGVPPDGLLSRRLTA*
Ga0116177_1037483113300009696Anaerobic Digestor SludgeMSSAADFAPVPEMAVQTLACAVIKQAMTDALDPTVPPDVRRDAEHFLAGDLWFRRWCAAANLPATRLLSRRYSA*
(restricted) Ga0172375_1015954323300013137FreshwaterMLQTPSTFPHVPELAAKTLACAVIKQALADALDPTQPVDVRRDALEFLSGDDWYRRWCSMGGLKPVRLISSRIAA*
Ga0170573_1072098223300013232SedimentMLQTPSTIPHVPELAAKTLACAVIKQALADALDSTQPVDVRRDALEFLSGDDWYRRWCSMAGLKPVRLISHRMAA*
Ga0173609_1032323413300013315SedimentMSLSVKALACAVIKQALSDALDPTTPPGVRRDAERFLAGDAWFRRWSVAAGMAPVRLITRRHAA*
Ga0173609_1088947923300013315SedimentMLQTPSTFPHVPVLAAKTLACAVIKQALADALDPTQPVDVRRDALEFLSGDDWYRRWCSMAGLKPVRLISHRMAA*
Ga0075352_128812113300014324Natural And Restored WetlandsMLRTVAHAHCPEIAVQSLACAVIKQALVDALDPTTPPDVRHDAEQFLAGDAWFRRWCMAAGIRPTGM
Ga0209324_1058886823300025174SoilNLACAVIKQAMMDALDPTAPADVRHDAEQFLNGDSWYEAWCETAGIQPTPLLSRRHA
Ga0209718_107031713300025682Anaerobic Digestor SludgeMSADVECASVSEMAVKTLACAVIKQALCDALDPTVPERIRRDAEQFLAGDVRFRRWSAVAGVPPDGLLSRRLTA
Ga0209392_100644333300027683Freshwater SedimentMSSAIVCSNAPELAVRTLACAVIKQALSDALDPTTPPGVRRDAERFLAGDAWFRRWSVAAGMSPVRLITRRHAA
Ga0209288_1005616213300027762Freshwater SedimentMSSAIVCSNAPELAVRTLACAVIKQALSDALDPTTPPGVRRDAERFLAGDAWFRRWSVAAGMAPVRLITRRHAA
Ga0209798_1011209313300027843Wetland SedimentVHMSSALAYSHAPVLPVQTLACAVIKQALSDALDPTTPPDVRRDAEQFLAGDAWFRRWCVAAGMPPTRLITRRHAV
Ga0209397_1007245523300027871WetlandMSTTAGYVNAPELAVRTLACAVIKQALSDALDPTTPPDVRRDAEQFLAGDAWFRRWCVAAGMPPVRMITRRHAA
Ga0209397_1022645013300027871WetlandPEVVMSSAVACSNVPELAVKTLACAVIKQALSDALDPTTPPDVRNDAEQFLAGDAWFRRWCVAAGVAPVRMITRRHAA
Ga0209397_1033427013300027871WetlandMSTRVAYADCPEIAVKTLACAVIKQALVDALDPMTPSEVRRDAEQFLAGDAWFRRWCMAAGIRPARMISRRYAA
Ga0209450_1000260723300027885Freshwater Lake SedimentMSSAIACSNAPELAVRTLACAVIKQALSDALDPTTPPGVRRDAEQFLAGDAWFRRWSVAAGMSPVRLITRRHAV
Ga0209450_1010740523300027885Freshwater Lake SedimentMSSALAYADAPELAVKALACAVIKQALSDALDPTTPTDVRRDAEQFLAGDAWFRRWCVAAGMPPVRMITRRHAA
Ga0209450_1010832923300027885Freshwater Lake SedimentMSTAAACANVPELSVRTLACAVIKQALSDALDPTTPPDVRRDAEQFLAGDAWFRRWCVAAGMPPVRMITRRHAA
Ga0208980_1062864413300027887WetlandMSSAAALAHVPELAVKTLACAVIKQALSDALDPMNSPDVRRDAEQFLAGDAWFRRWCVAAGMRPIRLITRRHAA
Ga0209496_1050384913300027890WetlandMSTTAVYLNAPELAVRTLACAVIKQALSDALDPTTPPDVRRDAEQFLAGDAWFRRWCVAAGMPPVRMITRRHAA
Ga0209254_1000792433300027897Freshwater Lake SedimentMSSAIVCSNAPEHAVRTLACAVIKQALLDALDPTTPPGVRRDAEQFLAGDAWFRRWSIAAGRSPVRLITRRHAA
Ga0209254_1010099813300027897Freshwater Lake SedimentMSTAAAYANVPLLPVRTLACAVIKQALSDALDPTTPLEVRRDAEQFLAGDAWFRRWSLAAGMSPIRLITRRHAA
Ga0209254_1015663013300027897Freshwater Lake SedimentMSTAAAYANVPERSVRTLACAVIKQALSDALDPTTPLEVRLDAEQFLAGDTWFRRWSAAAGMRPTHLITRRHAA
Ga0209254_1053939923300027897Freshwater Lake SedimentMSTAAACANVPELSVRTLACAVIKQALSDALDPTTPLEVRRDAEQFLAGDAWFRRWSVAAGMSPIRLITRRHAA
Ga0209668_1055180423300027899Freshwater Lake SedimentMMQSPATYAHVPELASKTLACAVIKQALADALDPTQPADVRRDAFKFLSGDDWYRRWCSMAGLKPVRLISRRVAA
Ga0209668_1100302013300027899Freshwater Lake SedimentMSTAVAYANVPERSVRTLACAVIKQALSDALDPTTPLDVRLDAEQFLAGDKWFRRWSVAAGMRPTHLITRRHAA
Ga0209253_1007278233300027900Freshwater Lake SedimentMSTAAAYANVPALSVRTLACAVIKQALSDALDPTTPPDVRRDAEQFLAGDAWFRRWSVAAGMSPIRLITRRHAV
Ga0209253_1016418633300027900Freshwater Lake SedimentMSSAVAYSEVPVLAVKTLACAVIKQALSDALDPTTPPDVRRDAEQFLAGDAWFRRWCIAAGMPPTRLISRRHAV
Ga0209253_1074859623300027900Freshwater Lake SedimentMTSPAVCAPAPELAIKTLACAVIKQALLDALDPTVPVGIRRDALQFLAGDRWFRRWCAAAGMRPVGLLSRRHAA
Ga0209048_1002757223300027902Freshwater Lake SedimentMSSAVAYVHVPELAVKTLACAVIKQALADALDPTTPDDVRRDAEQFLAGDSWFKRWCVAAEMTPVRLITRRHTV
Ga0268284_118127613300028176Saline WaterMMQSQPIFPHVPELASRTLACAVIKQALADALDPTQPLDVRRDALEFLSGDDWYRRWCATAGLK
Ga0265593_115876513300028178Saline WaterMMQSQPIFPHVPELASRTLACAVIKQALADALDPTQPLDVRRDALEFLSGDDWYRRWCATAGLKPVRLISSRMAA
Ga0311333_1105849313300030114FenMHQIKFAHVPQLAAKTLACAVIKQALADALDPTLPEDVREDAQEFLAGDEWYRQWCMVAGLKPVRLFTPRRMAA
Ga0315290_1002250043300031834SedimentMMQSPATYLPVPELASKTLACAVIKQALADALNPTQPANVRRDAFEFLSGDDWYRRWCSMAGLKPVRLISRREAA
Ga0315290_1011964123300031834SedimentMMHSTTIYPHVPELAAKTLACAVIKQALADALDPTQPLDVQRDAFEFLAGDEWYRQWCTVAGLEPVRLLSRRIAV
Ga0315290_1094656323300031834SedimentWSPCAPPDRGAIEVDMSTAAAYANVPERSVRTLACAVIKQALSDALDPTTPLDVRLDAEQFLAGDTWFRRWSVAAGMRPTHLITRRHAG
Ga0315297_1096362513300031873SedimentMSTAAAYSNVPNLSVKPLACAVIKQALSDALDPTTPLEVRRDAEQFLAGDAWFRRWSAAAGMSPIRLITRRHAA
Ga0315278_1023841933300031997SedimentMMQSKTNYPHVPELAAKTLACAVIKQALADALDPTQPFDVQRDAFEFLSGDEWYRQWCTVAGLEPVRLLSRRIAV
Ga0315292_1075006623300032143SedimentMMQSKTNYPHVPELAAKTLACAVIKQALADALDPTQPLDVQRDAFEFLSGDEWYRQWCTVAGLEPVRLLSRRIAV
Ga0315292_1093419223300032143SedimentMSTAAAYANVPERSVRTLACAVIKQALSDALDPTTPLDVRLDAEQFLAGDTWFRRWSVAAGMRPTHLITRRHAG
Ga0315283_1011986523300032164SedimentMSTAAAYSNVPNLSVKPLACAVIKQALSDALDPTTPLEVRRDAEQFLAGDAWFRRWSVAAGMSPIRLITRRHAG
Ga0315268_1032538133300032173SedimentMTQSPATYAHVPELASKTLACAVIKQALADALDPTQPLDVQQDALAFLEGDDWYRQWCTVAGLLPTRLLSRRIVA
Ga0315271_1022006723300032256SedimentMMQSPAVYPHVPELAAKTLACAVIKQALADALDPTQPLDVQQDALAFLEGDDWYRQWCTVAGLLPTRLLSRRIVA
Ga0315271_1091795023300032256SedimentMTQSPATYAHVPELASKTLACAVIKQALADALDPTQPADVRRDAFKFLSGDAWYRRWCLMAGLKPVRLMSPRAAA
Ga0315270_1025015713300032275SedimentMTQIPATYSHVPELASKTLACAVIKQALADALDPTQPADVRTDAFKFLSGDLWYRRWCSMAGLKPVRLMSPRTAA
Ga0315287_1088118713300032397SedimentMSTAAAYSNVPNLSVKPLACAVIKQALSDALDPTTPLEVRRDAEQFLAGDAWFRRWSVAAGMSPIRLITRRHAA
Ga0315287_1106954123300032397SedimentMTQSPATNAHVPELASKTLACAVIKQALADALDPTQPADVRRDAFKFLSGDGWYRRWCAMAGLKPVRLMSPRAAA
Ga0315287_1122317623300032397SedimentIEVDMSTAAAYANVPERSVRTLACAVIKQALSDALDPTTPLEVRLDAEQFLAGDTWFRRWSAAAGMRPTHLITRRHAA
Ga0315273_1101398413300032516SedimentMSNATACTHVPDFAVRTLACAVIKQALLDALDPTAPPEVQRDAQDFLAGDQWYRRWCSAA
Ga0315273_1204587613300032516SedimentMMQSQATHPQVPELASKTLACAVIKQALADALDPTQPANVRRDAFEFLSGDDWYRRWCSMAGLKPVRLISRRF
Ga0315273_1225819223300032516SedimentMSDATAYAHVPELAVKTLACAVIKQALLDALDPTAPLDVQRDARVFLAGDQWYRRWCTAAGMRPVGLLSRR
Ga0316604_1008845123300033406SoilPRAPSDRGATEVDMSTTAACANVPQLAVRTLACAVIKQALSDALDPTTRPDVRRDAEQFLAGDAWFQRWCVAAGMRPIRLITRRHAA
Ga0316605_1012386023300033408SoilMSTTAAYANAPELAVKTLACAVIKQALSDALDPTTSPDLRRDAEQFLAGDAWFRRWCVAAGLQPVRLISRRHAA
Ga0316605_1016472723300033408SoilMSTTVACAEYPEIAVKTLACAVIKQALVDALDPTTPSEVRRDAEQFLAGDAWFRRWCLAAGIRPTGLITRRYAA
Ga0316605_1020154133300033408SoilMSTTAACANVPQLAVRTLACAVIKQALSDALDPTTRPDVRRDAEQFLAGDAWFQRWCVAAGMRPIRLITRRHAA
Ga0316605_1029486223300033408SoilMTSPAVCDPAPELAIKTLACAVIKQALLDALDPTVPVGIRRDALQFLAGDRWFRRWCAAAGMRPVGLLSRRHAA
Ga0316605_1058387323300033408SoilMSTTAGYVNAPELAVRTLACAVIKQALTDALDPTTPTDVRRDAEQFLAGDAWFRRWCVAAGMPPVRMITRRHAA
Ga0316605_1100570923300033408SoilMSTTAGYLNAPELAVRTLACAVIKQALSDALDPTTPPDVRRDAEQFLAGDAWFRRWCVAAGMPPVRMITRRHAA
Ga0316605_1112075623300033408SoilMSMTAAYANLPEVAVRTLACAVIKQALADALDPTTPPDVRRDAEQFLAGDAWFRRWSVAAGMRPSRLITRRHAA
Ga0316605_1141643213300033408SoilMSTTVAYADCPEIAVKTLACAVIKQALVDALDPTTPPEVRRDAEQFLAGDAWFRRWCMAAGIRPTRMINRRYAA
Ga0316603_1011178913300033413SoilIAAYANAPELAVKTLACAVIKQALSDALDPTTSPDVRRDAEQFLAGDAWFRRWCVAAGLQPVRLITRRHAA
Ga0316603_1025371523300033413SoilMSTTAGYLNAPELAVRTLACAVIKQALTDALDPTTPTDVRRDAEQFLAGDAWFRRWCMAAGMPPVRMITRRHAA
Ga0316603_1033748223300033413SoilMSSAVAYSDAPVLAVKSLACAVIKQALSDALDPTTPPEVRRDAEQFLAGDEWFRRWCTAAGMPQTRLISRRHVV
Ga0316603_1035516013300033413SoilMSTTAAYADCPEIAVKTLACAVIKQALVDALDPTTPPDVRRDAEQFLAGDAWFRRWCVAAGIRPTRMISRRHAA
Ga0316603_1049784323300033413SoilMSMTAAYANLPEVAVKTLACAVIKQALADALDPTTPPDVRRDAEQFLAGDAWFRRWSAAAGMRPSRLITRRHAA
Ga0316603_1190286923300033413SoilMSTAAACANVPELAVRTLACAVIKQALSDALDPTTHPDVRRDAEQFLAGDAWFRRWCAAAGMSPSGLITRRHAA
Ga0316619_1014285433300033414SoilMTSPAVCDPAPELAIKTLACAVIKQALLDALDPTVPVGIRRDALQFLAGDRWFRRWCAAAGMRPVG
Ga0316619_1103423723300033414SoilAGYVNAPELAVRTLACAVIKQALTDALDPTTPTDVRRDAEQFLAGDAWFRRWCMAAGMPPVRMITRRHAA
Ga0316619_1187293113300033414SoilELAVRTLACAVIKQALADALDPTTPPAVRRDAEEFLSGDAWFRRWCVAAGMRPTSLITRRHAA
Ga0316622_10008862323300033416SoilMSTTAACRNVPELAVRTLACAVIKQALSDALDPTTHPDVRRDAEQFLAGDAWFRRWCVAAGMQPIRLITRRHAA
Ga0316622_10049745313300033416SoilVVMPSTTAFSHIPELAVKTLACAVIKQALTDALDPTTPENVRQDAQQFLAGDAWFRRWCLAAGMSPVRLITRRHAG
Ga0316622_10052877723300033416SoilMSIAAACVESPEIAVKTLACAVIKQALVDALDPTTPPDVRRDAEQFLAGDAWFRRWCMAAGIRPTRLISRRFAA
Ga0316622_10056437223300033416SoilMSTTAAFAESPEIAVKTLACAVIKQALVDALDPTTPPDVRRDAEQFLAGDAWFRRWCMAAGIRPTRLITRRFAA
Ga0316622_10056500123300033416SoilMSSAVAYSDAPVLAVKTLACAVIKQALSDALDTTNPPEVRRDAEQFLAGDEWFRRWCIAAGMPQTGLISRRHVV
Ga0316622_10072716213300033416SoilRGATEVDMSTTAACANVPQLAVRTLACAVIKQALSDALDPTTRPDVRRDAEQFLAGDAWFQRWCVAAGMRPIRLITRRHAA
Ga0316622_10101029613300033416SoilMSMTAAYANLPEVAVRTLACAVIKQALADALDPTTPPDVRRDAEQFLAGDAWFRRWSVAAGMRPNRLITRRHAA
Ga0316622_10182705723300033416SoilSPAPELAIKTLACAVIKQALLDALDPTVPAGIRRDALHFLQGDRWFRRWCAAAGMRPVRLLSRRHAA
Ga0316625_10003958013300033418SoilDMSTTAAYADCPEIAVKTLACAVIKQALVDALDPTTPPDVRRDAEQFLAGDAWFRRWCVAAGIRPTRMISRRHAA
Ga0316625_10159880523300033418SoilMCEWGDGPGTAPEVVMPSTTAFSHIPELAVKTLACAVIKQALTDALDPTTPENVRQDAQQFLAGDAWFRRWCLAAGMSPVRLITRRHAG
Ga0316625_10174221213300033418SoilSSAVAFAHIPELAVKTLACAVIKQALSDALDPTLPFEVRQDAREFLEGDEWYRQWCAVAGLPPIRLLTRRMAA
Ga0316625_10249471123300033418SoilMSTTAGYLNAPELAVRTLACAVIKQALTDALDPTTPTDVRRDAEQFLAGDAWFRRWCVAAGMPPVRMITRRHAA
Ga0316601_10006298213300033419SoilAAYADCPEIAVKTLACAVIKQALVDALDPTTPPDVRRDAEQFLAGDAWFRRWCVAAGIRPTRMISRRHAA
Ga0316601_10023898423300033419SoilVPVPGAIEVDMSTTAAYANVPELAVKTLACAVIKQALADALDPTTPPDVRRDAEQFLAGDAWFRRWCVAASMRPSRLITRRHAA
Ga0316601_10209851523300033419SoilMSTTAACANVPQLAVRTLACAVIKQALSDALDPTTRPDVRRDAEQFLAGDAWFQRWCVAAGMRPIRLITRRHA
Ga0326726_1107081323300033433Peat SoilMSSAAVFAHLPELTVKALACAVIKQALSDALDPTVPDDVRRDAQSFLAGDQWFRRWCAAAGMRPVRLFTRRHAA
Ga0316600_1019255423300033481SoilMSMTAAYANLPEVSVRTLACAVIKQALADALDPTTPPDVRRDAEQFLAGDAWFRRWSVAAGMRPSRLITRRHAA
Ga0316600_1049901213300033481SoilPPRAPSDRGATEVDMSTTAACANVPQLAVRTLACAVIKQALSDALDPTTRPDVRRDAEQFLAGDAWFQRWCVAAGMRPIRLITRRHAA
Ga0316627_10018542223300033482SoilMPSTTAFSHIPELAVKTLACAVIKQALTDALDPTTPENVRQDAQQFLAGDAWFRRWCLAAGMSPVRLITRRHAG
Ga0316627_10101485523300033482SoilMHSQDAYAHVPELAAKTLACAVIKQALADALDPTVPPDVRRDAREFLAGDDWYRQWCTLAGLRPVRLLSKRAAA
Ga0316629_1004718323300033483SoilMSTTAGYVNAPELTVRTLACAVIKQALTDALDPTTPPDVRRDAEQFLAGDAWFRRWCVAAGMPPVRMITRRHAA
Ga0316629_1031495413300033483SoilVPVPGAIEVDMSTTAAYADCPEIAVKTLACAVIKQALVDALDPMTPSEVRRDAEQFLAGDAWFRRWCMAAGIRPARMISRRYAA
Ga0316631_1030615613300033493SoilMSTTAACANVPQLAVRTLACAVIKQALSDALDPTTRPDVRRDAEQFLAGDAWFQRWCVAAGMRPIRLIT
Ga0316628_10414332523300033513SoilPSIPNEVGPQRLQEATMTSPAVCDPAPELAIKTLACAVIKQALLDALDPTVPVGIRRDALQFLAGDRWFRRWCAAAGMRPVGLLSRRHAA
Ga0316616_10236390613300033521SoilMSTTAGYLNAPELAVRTLACAVIKQALTDALDPTTPTDVRRDAEQFLAGDAWFRRWCMAA
Ga0316616_10246388313300033521SoilMSSAVAYAHIPELAVKTLACAVIKQALVDALDPTTPAEVRRDALDFLAGDVWYRRWCVAAGLPPVRLISRQHAA
Ga0316616_10308106413300033521SoilGADAPRRHPMHSQDAYAHVPELAAKTLACAVIKQALADALDPTVPPDVRRDAREFLAGDDWYRQWCTLAGLRPVRLLSKRAAA
Ga0316617_10001385633300033557SoilMSTTAAYADCPEIAVKTLACAVIKQALVDALDPTTPPDVRRDAEQFLAGDAWFRRWCMAAGIRPTRMISRRHAA
Ga0316617_10088390423300033557SoilMQSTVAYAHVPELAAKTLACAVIKQALADALDPTVPADVRRDAEEFLAGDAWFRRWCLAAGMKPIRLITRRHVV
Ga0316617_10133452323300033557SoilMSTTAAYANAPELAVRTLACAVIKQALSDALDPTTSPDLRRDAEQFLAGDAWFRRWCVAAGLQPVRLISRRHAA
Ga0316617_10155680113300033557SoilAAPDPGANEVAMSTTAGYLNAPELAVRTLACAVIKQALTDALDPTTPTDVRRDAEQFLAGDAWFRRWCVAAGMPPVRMITRRHAA
Ga0316617_10186043613300033557SoilMSSAVAYAHIPELAVKSLACAVIKQALADALDPTTPAEVRRDALDFLAGDVWYRRWCVAAGLPPVRLISRQHAA
Ga0373893_038322_448_6303300034056Sediment SlurryVRTLACAVIKQALTDALDPTTPPDVRRDAEQFLAGDAWFRRWCVAAGMPPVRMITRRHAA
Ga0373894_019753_101_3253300034074Sediment SlurryMPTTAAYVNAPELAVRTLACAVIKQALTDALDPTTPPDVRRDAEQFLAGDAWFRRWCVAAGMPPVRMITRRHAA
Ga0373894_065097_377_5593300034074Sediment SlurryMSMPAGYLHAPELAVRTLACAVIKQALADALDPTTPREVRRDAEQFLAGTAWFRRWCVAA
Ga0373897_048780_115_3933300034080Sediment SlurryLLAWSSCAPPDRGAIEVDMSTAAAYSNVPNSSVKPLACAVIKQALSDALDPTTPLEVRRDAEQFLAGDAWFRRWSAAAGMRPTHLITRRHAA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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