Metagenome / Metatranscriptome Family F045211

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F045211
Family Type	Metagenome / Metatranscriptome
Number of Sequences	153
Average Sequence Length	43 residues
Representative Sequence	FFGAETSRDYVAELLFFILITGIAAWPVVSMLIAVIRLIRNY
Number of Associated Samples	133
Number of Associated Scaffolds	153

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.35 %
% of genes near scaffold ends (potentially truncated)	96.08 %
% of genes from short scaffolds (< 2000 bps)	90.85 %
Associated GOLD sequencing projects	130
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.732 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (19.608 % of family members)
Environment Ontology (ENVO)	Unclassified (28.758 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.098 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.14% β-sheet: 0.00% Coil/Unstructured: 42.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 153 Family Scaffolds
PF13414	TPR_11	10.46
PF00069	Pkinase	1.31
PF02237	BPL_C	0.65
PF13432	TPR_16	0.65
PF13181	TPR_8	0.65
PF08281	Sigma70_r4_2	0.65
PF00685	Sulfotransfer_1	0.65
PF05958	tRNA_U5-meth_tr	0.65

COG ID	Name	Functional Category	% Frequency in 153 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	5.23
COG0340	Biotin-protein ligase	Coenzyme transport and metabolism [H]	0.65
COG2265	tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family	Translation, ribosomal structure and biogenesis [J]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.73 %
Unclassified	root	N/A	3.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.73 %
Unclassified	root	N/A	3.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.73 %
Unclassified	root	N/A	3.27 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	88.24 %
Unclassified	root	N/A	3.27 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	88.24 %
Unclassified	root	N/A	3.27 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	54.25 %
Unclassified	root	N/A	3.27 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	54.25 %
Unclassified	root	N/A	3.27 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.65 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	54.25 %
Unclassified	root	N/A	3.27 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.65 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	54.25 %
Unclassified	root	N/A	3.27 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	0.65 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	54.25 %
Unclassified	root	N/A	3.27 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459005\|F1BAP7Q01B9JYT	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	502	Open in IMG/M
3300000955\|JGI1027J12803_100373547	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	519	Open in IMG/M
3300000955\|JGI1027J12803_100474874	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	544	Open in IMG/M
3300004153\|Ga0063455_100448740	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	782	Open in IMG/M
3300005093\|Ga0062594_101782798	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	647	Open in IMG/M
3300005171\|Ga0066677_10516485	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	686	Open in IMG/M
3300005174\|Ga0066680_10968148	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	500	Open in IMG/M
3300005175\|Ga0066673_10591512	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	646	Open in IMG/M
3300005179\|Ga0066684_10788934	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	629	Open in IMG/M
3300005181\|Ga0066678_10019928	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3493	Open in IMG/M
3300005186\|Ga0066676_11042954	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	542	Open in IMG/M
3300005289\|Ga0065704_10192738	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
3300005290\|Ga0065712_10421995	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	711	Open in IMG/M
3300005340\|Ga0070689_100212862	All Organisms → cellular organisms → Bacteria	1583	Open in IMG/M
3300005439\|Ga0070711_101960791	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515	Open in IMG/M
3300005444\|Ga0070694_101227047	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	629	Open in IMG/M
3300005445\|Ga0070708_100371807	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300005447\|Ga0066689_10806212	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	583	Open in IMG/M
3300005467\|Ga0070706_102154524	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300005530\|Ga0070679_101109259	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	736	Open in IMG/M
3300005530\|Ga0070679_101167948	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	715	Open in IMG/M
3300005546\|Ga0070696_101426942	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	591	Open in IMG/M
3300005554\|Ga0066661_10311869	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	968	Open in IMG/M
3300005558\|Ga0066698_10741967	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	642	Open in IMG/M
3300005574\|Ga0066694_10472368	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	586	Open in IMG/M
3300005575\|Ga0066702_10680704	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	614	Open in IMG/M
3300006176\|Ga0070765_101472589	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	641	Open in IMG/M
3300006791\|Ga0066653_10516823	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	604	Open in IMG/M
3300006800\|Ga0066660_10507610	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1013	Open in IMG/M
3300006800\|Ga0066660_10978987	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	682	Open in IMG/M
3300009029\|Ga0066793_10378382	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	814	Open in IMG/M
3300009090\|Ga0099827_10817745	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	806	Open in IMG/M
3300009137\|Ga0066709_102032836	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	795	Open in IMG/M
3300009143\|Ga0099792_11131509	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	529	Open in IMG/M
3300010042\|Ga0126314_10885672	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	659	Open in IMG/M
3300010301\|Ga0134070_10129998	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	893	Open in IMG/M
3300010320\|Ga0134109_10145047	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	852	Open in IMG/M
3300010320\|Ga0134109_10369472	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	567	Open in IMG/M
3300010321\|Ga0134067_10375525	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	565	Open in IMG/M
3300010322\|Ga0134084_10408429	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	531	Open in IMG/M
3300010325\|Ga0134064_10231482	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	676	Open in IMG/M
3300010326\|Ga0134065_10370084	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	568	Open in IMG/M
3300010333\|Ga0134080_10348256	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	674	Open in IMG/M
3300010335\|Ga0134063_10294602	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	779	Open in IMG/M
3300010335\|Ga0134063_10450562	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	638	Open in IMG/M
3300010336\|Ga0134071_10282408	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	831	Open in IMG/M
3300010336\|Ga0134071_10519862	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	616	Open in IMG/M
3300010336\|Ga0134071_10588776	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	581	Open in IMG/M
3300010358\|Ga0126370_12051096	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	560	Open in IMG/M
3300010359\|Ga0126376_11512069	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	700	Open in IMG/M
3300010364\|Ga0134066_10269133	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	598	Open in IMG/M
3300010376\|Ga0126381_100525792	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1672	Open in IMG/M
3300010396\|Ga0134126_12101435	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	617	Open in IMG/M
3300012198\|Ga0137364_10467586	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	947	Open in IMG/M
3300012198\|Ga0137364_10682402	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	775	Open in IMG/M
3300012199\|Ga0137383_10591609	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	812	Open in IMG/M
3300012200\|Ga0137382_10022468	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3647	Open in IMG/M
3300012203\|Ga0137399_10668311	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	874	Open in IMG/M
3300012203\|Ga0137399_11186741	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	643	Open in IMG/M
3300012204\|Ga0137374_10162932	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1972	Open in IMG/M
3300012205\|Ga0137362_10913652	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	749	Open in IMG/M
3300012207\|Ga0137381_10422623	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1163	Open in IMG/M
3300012209\|Ga0137379_10379152	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1323	Open in IMG/M
3300012210\|Ga0137378_10045009	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3958	Open in IMG/M
3300012210\|Ga0137378_11032484	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	736	Open in IMG/M
3300012211\|Ga0137377_10266669	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1644	Open in IMG/M
3300012349\|Ga0137387_10262389	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1246	Open in IMG/M
3300012354\|Ga0137366_10090695	All Organisms → cellular organisms → Bacteria	2320	Open in IMG/M
3300012356\|Ga0137371_11058036	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	612	Open in IMG/M
3300012357\|Ga0137384_10866625	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	728	Open in IMG/M
3300012359\|Ga0137385_10099273	All Organisms → cellular organisms → Bacteria	2581	Open in IMG/M
3300012885\|Ga0157287_1058976	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	625	Open in IMG/M
3300012895\|Ga0157309_10338847	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	519	Open in IMG/M
3300012915\|Ga0157302_10307175	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	618	Open in IMG/M
3300012917\|Ga0137395_10552715	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	831	Open in IMG/M
3300012918\|Ga0137396_10338532	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1113	Open in IMG/M
3300012922\|Ga0137394_10187796	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1763	Open in IMG/M
3300012923\|Ga0137359_11281728	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	621	Open in IMG/M
3300012924\|Ga0137413_10129871	All Organisms → cellular organisms → Bacteria	1617	Open in IMG/M
3300012924\|Ga0137413_11750589	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	512	Open in IMG/M
3300012951\|Ga0164300_10453598	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	720	Open in IMG/M
3300012975\|Ga0134110_10373884	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	628	Open in IMG/M
3300012977\|Ga0134087_10573714	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	580	Open in IMG/M
3300012986\|Ga0164304_10322845	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1067	Open in IMG/M
3300012987\|Ga0164307_10208656	All Organisms → cellular organisms → Bacteria	1335	Open in IMG/M
3300012988\|Ga0164306_11739195	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	541	Open in IMG/M
3300012989\|Ga0164305_10757319	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	800	Open in IMG/M
3300013100\|Ga0157373_10902898	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	655	Open in IMG/M
3300013760\|Ga0120188_1029242	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	623	Open in IMG/M
3300014150\|Ga0134081_10056468	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1180	Open in IMG/M
3300014150\|Ga0134081_10141477	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	784	Open in IMG/M
3300014166\|Ga0134079_10250830	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	765	Open in IMG/M
3300014166\|Ga0134079_10291175	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300015051\|Ga0137414_1045183	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	708	Open in IMG/M
3300015358\|Ga0134089_10444567	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	560	Open in IMG/M
3300015374\|Ga0132255_105210397	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	550	Open in IMG/M
3300016422\|Ga0182039_12254696	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	503	Open in IMG/M
3300017656\|Ga0134112_10254059	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	698	Open in IMG/M
3300018051\|Ga0184620_10250735	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	594	Open in IMG/M
3300018061\|Ga0184619_10047846	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1853	Open in IMG/M
3300018061\|Ga0184619_10085197	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1406	Open in IMG/M
3300019869\|Ga0193705_1055819	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	806	Open in IMG/M
3300019876\|Ga0193703_1062875	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300019886\|Ga0193727_1018167	All Organisms → cellular organisms → Bacteria	2560	Open in IMG/M
3300020059\|Ga0193745_1003780	All Organisms → cellular organisms → Bacteria	3176	Open in IMG/M
3300021080\|Ga0210382_10293626	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	715	Open in IMG/M
3300021344\|Ga0193719_10371585	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	592	Open in IMG/M
3300021418\|Ga0193695_1024067	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1290	Open in IMG/M
3300024186\|Ga0247688_1051592	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	662	Open in IMG/M
3300025898\|Ga0207692_10648477	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	682	Open in IMG/M
3300025900\|Ga0207710_10072034	All Organisms → cellular organisms → Bacteria	1586	Open in IMG/M
3300025903\|Ga0207680_10447051	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	917	Open in IMG/M
3300025906\|Ga0207699_10505772	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	872	Open in IMG/M
3300025922\|Ga0207646_10283815	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1496	Open in IMG/M
3300025929\|Ga0207664_10860742	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	815	Open in IMG/M
3300025930\|Ga0207701_10411769	All Organisms → cellular organisms → Bacteria	1164	Open in IMG/M
3300026088\|Ga0207641_10161295	All Organisms → cellular organisms → Bacteria	2039	Open in IMG/M
3300026118\|Ga0207675_101116970	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	808	Open in IMG/M
3300026332\|Ga0209803_1121837	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1042	Open in IMG/M
3300026342\|Ga0209057_1158394	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	692	Open in IMG/M
3300026475\|Ga0257147_1016974	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1001	Open in IMG/M
3300026547\|Ga0209156_10042357	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2475	Open in IMG/M
3300027655\|Ga0209388_1124150	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	735	Open in IMG/M
3300028819\|Ga0307296_10523690	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	649	Open in IMG/M
3300028881\|Ga0307277_10465217	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	567	Open in IMG/M
3300028885\|Ga0307304_10517005	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	548	Open in IMG/M
3300030916\|Ga0075386_12020293	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1275	Open in IMG/M
3300030923\|Ga0138296_1119761	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1187	Open in IMG/M
3300030997\|Ga0073997_11901771	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	592	Open in IMG/M
3300031057\|Ga0170834_111286175	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	608	Open in IMG/M
3300031231\|Ga0170824_115774624	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	513	Open in IMG/M
3300031231\|Ga0170824_126000342	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	512	Open in IMG/M
3300031446\|Ga0170820_14389969	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	585	Open in IMG/M
3300031446\|Ga0170820_16896682	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	909	Open in IMG/M
3300031538\|Ga0310888_10786534	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	589	Open in IMG/M
3300031562\|Ga0310886_10754038	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	610	Open in IMG/M
3300031562\|Ga0310886_10823718	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	586	Open in IMG/M
3300031716\|Ga0310813_11192651	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	701	Open in IMG/M
3300031740\|Ga0307468_101520105	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	621	Open in IMG/M
3300031754\|Ga0307475_10511943	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	964	Open in IMG/M
3300031820\|Ga0307473_11559566	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	502	Open in IMG/M
3300031913\|Ga0310891_10308100	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	560	Open in IMG/M
3300031938\|Ga0308175_101993590	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	651	Open in IMG/M
3300031944\|Ga0310884_10929238	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	538	Open in IMG/M
3300032180\|Ga0307471_103518319	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	554	Open in IMG/M
3300033475\|Ga0310811_10316703	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1781	Open in IMG/M
3300033475\|Ga0310811_11420854	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	530	Open in IMG/M
3300033551\|Ga0247830_11446387	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	550	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.12%
Host-Associated	Host-Associated	5.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.50%
Plants	Host-Associated → Plants	5.88%
Aquatic	Environmental → Aquatic	2.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.92%
Sediment	Environmental → Aquatic → Sediment	1.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.96%
Freshwater	Environmental → Aquatic → Freshwater	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.39%
Loam	Environmental → Terrestrial → Soil → Loam	10.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.31%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	50.98%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.84%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.58%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.31%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.65%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.65%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	14.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.27%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.61%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.96%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	1.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.31%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.65%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.65%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.65%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.65%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.65%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012885	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013760	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C3.rep2	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019876	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300024186	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK29	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026475	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-A	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030923	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300030997	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E41_09729560	2170459005	Grass Soil	QLSSEFFAAESNRDYVAELFFFILITGIAAWPVMSMLIAVTRLIRNY
JGI1027J12803_1003735471	3300000955	Soil	PFHKLSSEFFGAKTSPDYIAELLFFILITGIAAWPVVSMLIAVTRLIRNY*
JGI1027J12803_1004748741	3300000955	Soil	HKLSSEFFGAETSRDYVAELLFFILITGIAAWPVVSMLIAVVRMIRNY*
Ga0063455_1004487401	3300004153	Soil	AETSWHYVAELSFFVLISGIAAWPIVSMLIAVVRMIRNY*
Ga0062594_1017827982	3300005093	Soil	HTLSSEFFGAETCRDYVTELVFFVLITGIAAWPVVSMLIAVTRMIRNY*
Ga0066677_105164851	3300005171	Soil	GAETSRDYVAELLFFILITCLAAWPVMSMLIAVVRMIRNY*
Ga0066680_109681482	3300005174	Soil	SEFFGAETSRDFFAELLFFILIAGIAAWPIISAIVAVIRLLRNY*
Ga0066673_105915121	3300005175	Soil	SEFFGAETSWDYRVELLFFILITCLAAWPIMSMLIAVVRMIRNY*
Ga0066684_107889342	3300005179	Soil	KLSSEFFGAETSRDYVAELLFFILITGIAAWPVVSMLIAVTRLIRNY*
Ga0066678_100199285	3300005181	Soil	FLGAETSRDYVAELSFFILITGIAAWPVMSMLIAVIRMIRNY*
Ga0066676_110429541	3300005186	Soil	FFGAETSRDYVAELLFFILITGIAAWPVVSMLIAVIRLIRNY*
Ga0065704_100360472	3300005289	Switchgrass Rhizosphere	KAPAFHKLSSKFFGAETSRDYVTELLFFILITGIAAWPVVSMLIAVIRLIRNY*
Ga0065704_101927382	3300005289	Switchgrass Rhizosphere	FGAETSRDYVTELLFFILITGIAAWPVVCMLIAVVRMIRNY*
Ga0065712_104219951	3300005290	Miscanthus Rhizosphere	AFHKLSSEFFGAETSRDYFAELLFFILIAGLAAWPIISAIIAVVRLLRNY*
Ga0070689_1002128621	3300005340	Switchgrass Rhizosphere	GETSRDFVAELLFFILITGLAVWPIMSMLIAVIRLIRNY*
Ga0070711_1019607911	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	FGAETSRDYFAELVFFILIAGIAAWPVMSMLIAVIRMIRNY*
Ga0070694_1012270471	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	HKLSSEFLGGETSRDYVAELLFFVLITGIAAWPIMSMLIAVVRMIRNY*
Ga0070708_1003718071	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	FHKLSSEFLGGETSRDYLAELLFFIVITGLAAWPIMSMLIAVIRMIRNY*
Ga0066689_108062121	3300005447	Soil	SELLGVERSRDYVAELLLFVLITGIAAWPVVSMLIAVTRLVRNY*
Ga0066682_103741771	3300005450	Soil	AFHKLSSEFFRGEATWDYIAELFFFILITGIAAWPVMSMFIAVIRLIRNY*
Ga0070706_1021545241	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	SSEFFGAETSRDYFAELLFFILIAGLAAWPIISAIIAVIRLLRNY*
Ga0070679_1011092592	3300005530	Corn Rhizosphere	FLAAETSRDYVAELSFFVLITGIAAWPIVSMLIAVVRMIRNY*
Ga0070679_1011679482	3300005530	Corn Rhizosphere	AFHKLSSKFFGAETSRDYFAELSFFVLITGIAAWPVVSMLIAVIRMIRNY*
Ga0070696_1014269421	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	EFLGGETSRDYVAELLFFILITGIAAWPVASMLIAVIRLIRNY*
Ga0066661_103118691	3300005554	Soil	ETSRDYFAELLFFILITGIAAWPVISMLIAVIRLLRNY*
Ga0066698_103238971	3300005558	Soil	FHKLSSEFFCGEATRDYIAELFFFILITGIAAWPVTSMFIAVIRLIRNY*
Ga0066698_107419671	3300005558	Soil	FFGAETSRDYVAELLFFVLITGIAAWPVVSMLIAVIRMIRNY*
Ga0066694_104723682	3300005574	Soil	ASRDFFAELLFFILIAGIAAWPVMSMLIAVIRLLRNY*
Ga0066702_106807042	3300005575	Soil	DYVAELLFFILITGIAVWPIMSMLIAVIRMIRNY*
Ga0070765_1014725891	3300006176	Soil	RDYIAELFFFILITGIAAWPVMSMLIAVTRLIRNY*
Ga0066653_105168231	3300006791	Soil	ASRNYVAELLFFILITGLAAWPVMSMLIAVIRMIRNY*
Ga0066660_105076101	3300006800	Soil	EFLGAETSRDYVAELLFFLLITCLAVWPIVTMLIAVVRMIRNY*
Ga0066660_109789871	3300006800	Soil	DYVAELLLFVLITGIAAWPVLSMLIAVTRLVRNY*
Ga0099794_107940661	3300007265	Vadose Zone Soil	AFHKLSSEFFGAESSRDYIAELFFFILITGITAWPVTSMLIAVTRLIRNY*
Ga0066793_103783821	3300009029	Prmafrost Soil	KLSSEFFGAETSRHYVAELLFFILITCIAAWPVMSMLIAVTRMIRNY*
Ga0099827_108177451	3300009090	Vadose Zone Soil	HGFHKVSGEFFGAEASRHYVAELLFFVLITGIVAWPVMSMLHAITRMVRNY*
Ga0066709_1020328361	3300009137	Grasslands Soil	HKLSSEFLGGETSRDYVAELLFFILISGIAAWPIMSMLIAVIRMIRNY*
Ga0099792_111315091	3300009143	Vadose Zone Soil	ETSRDYFAELLFFVLITGIAAWPIVSMLIAVVRMIRNY*
Ga0126314_108856722	3300010042	Serpentine Soil	SAETSWHYVAELSFFVLISGIAAWPIVSMLIAVVRMIRNY*
Ga0134070_101299982	3300010301	Grasslands Soil	FHKLSSEFFGAETSRDYIAELSFFVLITGIAAWPVMSMLIAVIRMIRNY*
Ga0134109_101450471	3300010320	Grasslands Soil	SWDYRVELLFFILITCLAAWPIMSMLIAVVRMIRNY*
Ga0134109_103694721	3300010320	Grasslands Soil	TSLDYVAELLFFILITCLAAWPIMSMLIAVVRMIRNY*
Ga0134067_103755251	3300010321	Grasslands Soil	KFFAAESSRDYIAELFFFILITGIAAWAVMSMLIAVTRLIRNY*
Ga0134084_104084292	3300010322	Grasslands Soil	SSEFFGAESSRDYIAEFSIFMLITGISVWPIISAMVAVTRLVRNY*
Ga0134064_102314822	3300010325	Grasslands Soil	RDYVAELLYFVLITGIAAWPVVSMLIAVTRMIRNY*
Ga0134065_103700842	3300010326	Grasslands Soil	DYVAELLFFILITGIAAWPIMSMLVAVIRMIRNY*
Ga0134080_103482561	3300010333	Grasslands Soil	AFHKLSSEFLGGETSRDYLAELLFFILITGLAAWPVMSMLIAVIRMIRNY*
Ga0134063_102946021	3300010335	Grasslands Soil	SSEFFGAEASRNYVAELLFFILITGLAAWPVMSMLIAVIRMIRNY*
Ga0134063_104505622	3300010335	Grasslands Soil	FCGEATRDYIAELFFFILITGVAAWPVMSMLIAVTRLIRNY*
Ga0134071_102824082	3300010336	Grasslands Soil	DYIAELFFFILITGIAAWPVMSMFIAVIRLIRNY*
Ga0134071_105198621	3300010336	Grasslands Soil	AETSRDYVTELLFFILITGIAAWPVVSMLIAVVRMIRNY*
Ga0134071_105887761	3300010336	Grasslands Soil	DYVAELLFFVLITGVAAWPVVSMLIAVIRLIRNY*
Ga0126370_120510961	3300010358	Tropical Forest Soil	SSEFLGAERSRDYVAELLFFILITCLASWPIMSMLIAVVRMIRNY*
Ga0126376_115120692	3300010359	Tropical Forest Soil	DYIAELSFFLLITGIAAWPIMSMLIAVIRMIRNY*
Ga0134066_102691332	3300010364	Grasslands Soil	AAESSRDYIAELFFFILITGIAAWAVMSMLIAVTRLIRNY*
Ga0126381_1005257923	3300010376	Tropical Forest Soil	DYVTELLFFVLITGTAAWSIVSMLIAVIRMIRNY*
Ga0134126_121014352	3300010396	Terrestrial Soil	FGAETSRDYLAELLFFVLITGIAAWPVVSMLIAVVRMIRNY*
Ga0137364_104675863	3300012198	Vadose Zone Soil	FHRLSSEFLGGETGRDYLAELLFFIVITGLAGWPIMSMLIAVIRMIRNY*
Ga0137364_106824022	3300012198	Vadose Zone Soil	AFHKLSSEFFGAETSRDYVAELLFFILITGIAAWPVVSMLIAVTRLIRNY*
Ga0137383_105916092	3300012199	Vadose Zone Soil	FGAETSRDDIAELSFFVLITGIAAWPVISMLIAVIRMIRNY*
Ga0137382_100224681	3300012200	Vadose Zone Soil	LSSEFLGGETSRDYVAELLFFILITGIAAWPVMSMLIAVIRLIRNY*
Ga0137399_106683111	3300012203	Vadose Zone Soil	ETSRDYFAELSFFILIACIAAWPVMSMLIAVIRMIRNY*
Ga0137399_111867412	3300012203	Vadose Zone Soil	DYVAELLFFLLITCLAVWPIVTMLIAVVRMIRNY*
Ga0137374_101629323	3300012204	Vadose Zone Soil	LGVERSRDYVAELLLFVLITGIAAWPVVSMLIAVTRLIRNY*
Ga0137362_109136522	3300012205	Vadose Zone Soil	TSRDYVAELLFFLLITCLAVWPIVTMLIAVVRMIRNY*
Ga0137381_104226233	3300012207	Vadose Zone Soil	AERTRDYVAELLLFVLITGITAWPVVSMLIAVTRLVRNY*
Ga0137379_103791521	3300012209	Vadose Zone Soil	ETSRDYVAELLFFILITGIAAWPIMSMLVAVVRMIRNY*
Ga0137378_100450095	3300012210	Vadose Zone Soil	MGAETSRDYFAELFFFILITGIAVWPVMSMLIAVIRLIRNY*
Ga0137378_110324841	3300012210	Vadose Zone Soil	SRDYVAELLFFILITGIAAWPVMSMLIAVIRLIRNY*
Ga0137377_102666691	3300012211	Vadose Zone Soil	KLSSEFFGAETSRDYIAELLFFILITGIAAWPVMSMLIAVIRLIRNY*
Ga0137387_102623891	3300012349	Vadose Zone Soil	SRDYVAELLFFILITGLAAWPVMSMLIAVIRMIRNY*
Ga0137366_100906951	3300012354	Vadose Zone Soil	SSEFFGAETSRDYIAELSFFVLITGIAAWPVISMLIAVIRMIRNY*
Ga0137371_110580362	3300012356	Vadose Zone Soil	YKLSSEVFGAKTSRDYIVELLFFILITGIAAWPIISAIIAVTRLVRNY*
Ga0137384_108666251	3300012357	Vadose Zone Soil	MGAETSRDYFAELFFFILITGIAVWPVMSMLIAVIRLIRN
Ga0137385_100992731	3300012359	Vadose Zone Soil	GAKTSRDYIVELLFFILITGIAAWPIISAIIAVTRLVRNY*
Ga0157287_10589761	3300012885	Soil	KLSSEFLAAETSRDYAAELSFFVLITGIAAWPFVSMLIAVVRMIRNY*
Ga0157309_103388471	3300012895	Soil	AETSRDYVAELLFFVLITGIAAWPIVSMLIAVVRMIRNY*
Ga0157302_103071751	3300012915	Soil	AFHKLSSKFFGAETSRDYVVELLFFILITGIAAWPVVSMLIAVIRLIRNY*
Ga0137395_105527151	3300012917	Vadose Zone Soil	SRDYVAELLFFLLITCLAVWPIVTMLIAVVRMIRNY*
Ga0137396_103385321	3300012918	Vadose Zone Soil	SSEFFGAESSRDYIAELFFFILITGIAAWPVMSMLIAVTRLIRNY*
Ga0137394_101877964	3300012922	Vadose Zone Soil	SSEFFGAETSRDYVAELLFFLLITCLAVWPIVTMLIAVVRMIRNY*
Ga0137359_112817281	3300012923	Vadose Zone Soil	GAETSRHYIAELSFFILITGIAAWPVMSMLIAVIRMIRNY*
Ga0137413_101298712	3300012924	Vadose Zone Soil	RDYVAELLFFILITGIAAWPVVSMLIAVIRLIRNY*
Ga0137413_117505892	3300012924	Vadose Zone Soil	GAETSRDYFAELLFFVLITGIAAWPVVSMLIAVVRMIRNY*
Ga0137407_109652461	3300012930	Vadose Zone Soil	PAFHKLSSEILGAETSRDYVVELLFFILITGIAAWPVVSTLIAVIRMIRNY*
Ga0164300_104535981	3300012951	Soil	FHKLSSEFLGSETSRDYVAELLFFILITGLAAWPIMSMLVAVIRMIRNY*
Ga0134110_103738841	3300012975	Grasslands Soil	SRDYVAELLFFILITCLAAWPVMSMLIAVVRMIRNY*
Ga0134087_105737142	3300012977	Grasslands Soil	TRDYIAELFFFILITGIAAWPVMSMLIAVIRMIRNY*
Ga0164304_103228451	3300012986	Soil	SSEFLGGETSRDFIAELLFFILITGLALWPIMSMLIAVVRMIRNY*
Ga0164307_102086562	3300012987	Soil	AFHKLSSKFFGAETSRDYVAELLFFILITGIAAWPVVSMLIAVIRMIRNY*
Ga0164306_117391951	3300012988	Soil	DYVTELLFFILITGIAAWPVVSMLIAVIRMIRNY*
Ga0164305_107573191	3300012989	Soil	LSSKFFGAETSRDYVTELLFFILITGIAAWPVVSMLIAVIRMIRNY*
Ga0157373_109028982	3300013100	Corn Rhizosphere	ETSRDYAAERSFFVLITGIAAWPIVSMLIAVVRMIRNY*
Ga0120188_10292421	3300013760	Terrestrial	RDYVTELLFFILITCLAAWPVMSMLIAVVRMIRNY*
Ga0134081_100564682	3300014150	Grasslands Soil	LGVERSRDYVAELLLFVLITGIAAWSVVSMLIAVTRLVRNY*
Ga0134081_101414771	3300014150	Grasslands Soil	SSEFLGGETSRDYVAELLFFVLITGIAAWPVVSMLIAVIRMIRNY*
Ga0134079_102508302	3300014166	Grasslands Soil	EFFGAETSRGYIAELLFFILIVGIAAWPVMSMLIAVIRMIRNY*
Ga0134079_102911751	3300014166	Grasslands Soil	SSEFFGAETSRGYIAELLFFILIAGLAAWPVMSMLIAVIRMIRNY*
Ga0137414_10451831	3300015051	Vadose Zone Soil	EFFGGETSRGDYVAELLFFILITGIAAWPVVSMLIAVVRMIRNY*
Ga0134089_104445671	3300015358	Grasslands Soil	SRDYMAELFFFILITGIAAWPVMSMLIAVIRLIRNY*
Ga0132255_1052103972	3300015374	Arabidopsis Rhizosphere	DYLAELLFFIVITGLAAWPTMSMLIAVVRMIRNY*
Ga0182039_122546962	3300016422	Soil	FGTEASRDYVAELLYFVLMTGIAAWPIVSMLIAVIRLIRNY
Ga0134112_102540592	3300017656	Grasslands Soil	SEFFGAETSRDYVAELLFFILITCLAAWPITSMLIAVVRMIRNY
Ga0184620_102507352	3300018051	Groundwater Sediment	AFHKLSSEFLGGETSRDYLAELLFFIVITGLAAWPIMSMLIAVIRLIRNY
Ga0184619_100478461	3300018061	Groundwater Sediment	SEFFGTEASRDYVAELLFFVLITGIAAWPVMSMLIAVIRMIRNY
Ga0184619_100851971	3300018061	Groundwater Sediment	KLSSEFFGAETSRDYFAELLFFILITGISAWQIISALVAVTRLVRNY
Ga0193705_10558192	3300019869	Soil	GETSRDYVAELLFFILITGIAAWPVVSMLIAVVRMIRNY
Ga0193703_10628752	3300019876	Soil	FHKLSSEFFGGETSRDYVAELLFFILITGIAAWPVVSMLIAVIRMIRNY
Ga0193727_10181673	3300019886	Soil	FFGGETSRDYVAELSFFILITGIAAWPVVSMLIAVVRMIRNY
Ga0193745_10037801	3300020059	Soil	GAETSRDYFAELLFFILIGGMAAWPIISAIIAVVRLLRNY
Ga0210382_102936261	3300021080	Groundwater Sediment	AETSRDYFAELLFFILIGGMAAWPIISAIIAVVRLLRNY
Ga0193719_103715851	3300021344	Soil	FGAETSRNYIAELFFFILITGILAWPIISAIVAVTRLVRNY
Ga0193695_10240671	3300021418	Soil	TSRDYVAELLFFVLITGIAAWPVMSMLIAVIRMIRNY
Ga0247688_10515921	3300024186	Soil	KLSSEFLSGETSRDYLAELLFFIVITGLAAWPIMSMLIAVIRLIRNY
Ga0207692_106484772	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	RDYVAELSFFILITCLAAWPVMSMVIAVVRMIRNY
Ga0207710_100720341	3300025900	Switchgrass Rhizosphere	LSSEFLRGETSRDFVAELLFFILITGLAVWPIMSMLIAVIRLIRNY
Ga0207680_104470512	3300025903	Switchgrass Rhizosphere	FHKLSSKFFGAETSRDYLAELLFFVLITGIAAWPVVSMLIAVVRMIRNY
Ga0207699_105057722	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	FLRGETSRDFVAELLFFILITGLAVWPIMSMLIAVIRMIRNY
Ga0207646_102838151	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	FGAETSRDYFAELLFFILIAGIAAWPIISAIVAVVRLLRNY
Ga0207664_108607421	3300025929	Agricultural Soil	EFFGAESSRDYIAELFFFILISAVAAWPVTSMLIAVTRLIRNY
Ga0207701_104117691	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	TSRDYVAELLFFILITGIAAWPIVSMLVAVIRMIRNY
Ga0207641_101612953	3300026088	Switchgrass Rhizosphere	GAETSRDYVAELLFFILITGLAAWPIMSMLVAVIRMIRNY
Ga0207675_1011169701	3300026118	Switchgrass Rhizosphere	SEFLGGETSRDYVAELLFFVLITGIAAWPIMSMLIAVVRMIRNY
Ga0209803_11218372	3300026332	Soil	GAETSRDYVAELSFFILITGIAAWPVMSMLIAVIRMIRNY
Ga0209057_11583942	3300026342	Soil	LGAETSRDYVVELLFFILITGIAAWPVVSMLIAVIRMIRNY
Ga0257147_10169741	3300026475	Soil	HKLSSEFFGAETSRDYFAELLFFILIAGIAAWPIISAIVAIIRLIRNY
Ga0209156_100423574	3300026547	Soil	AETSRNYVAELLFFILITCLAAWPITSMLIAVVRMIRNY
Ga0209388_11241502	3300027655	Vadose Zone Soil	HKLSSEFFGAETSRDYFAELLFFILIAGLAAWPIISAIIAVVRLLRNY
Ga0307296_105236902	3300028819	Soil	LSSEFFGAEASRDYVAELLFFLLITGLAAWPVVSMLIAVIRMIRNY
Ga0307277_104652171	3300028881	Soil	GETSRDYVAELFFFILITGLAAWPIMSMLVAVIRMIRNY
Ga0307304_105170051	3300028885	Soil	SSEFFGGETSRDYVAELLFFILITGIAAWPVVSMLIAVVRMIRNY
Ga0075386_120202931	3300030916	Soil	FFGAEASRDYVGELLYFVLITGIAAWPVVSMLIAVIRLIRNY
Ga0138296_11197611	3300030923	Soil	HKLSSEFFAAESSRDYIAELFFFILITGIAAWPVVSMLIAVTRLIRNY
Ga0073997_119017711	3300030997	Soil	FHKISSEFFGAETSRDYFAELLFFILIAGLAAWPIISAIIAVVRLLRNY
Ga0170834_1112861751	3300031057	Forest Soil	TSRDYFVELVFFILIAGIAVWPVMLMLIAVIRMIRNY
Ga0170824_1157746241	3300031231	Forest Soil	FFGAETSRDYFVELVFFILIAGIAVWPVMLMLIAVIRMIRNY
Ga0170824_1260003422	3300031231	Forest Soil	FTAESSRDYMVELFFFILITGIAAWPVMSMLIAVTRLIRNY
Ga0170820_143899692	3300031446	Forest Soil	AETSRDYVTELLFFILITGIAAWPVVSMLIAVIRMIRNY
Ga0170820_168966821	3300031446	Forest Soil	HKLSSKFFGTEASRDYVAELLFFIVITGLAAWPVVSMLIAVIRLIRNY
Ga0310888_107865341	3300031538	Soil	LGAETSRDYVAELLFFILITGLAAWPIMSMLVAVIRMIRNY
Ga0310886_107540381	3300031562	Soil	GGETSRDFVAELLFFILITGLAVWPIMSMLIAVIRLIRNY
Ga0310886_108237182	3300031562	Soil	KLSSDFLGGETSRDYVAELLFFIVITGLAAWPIMSMLIAVIRLIRNY
Ga0310813_111926511	3300031716	Soil	FGAETSRDYVAELLFFVLITGIAAWPVVSMLIAVVRMIRNY
Ga0307468_1015201052	3300031740	Hardwood Forest Soil	FFGAETSRDYFAELLFFVLITGIAAWPIMSMLVAVVRMIRNY
Ga0307475_105119432	3300031754	Hardwood Forest Soil	SEFFGAESSRDYIAELFFFILITGITAWPVMSMLIAVTRLIRNY
Ga0307473_115595662	3300031820	Hardwood Forest Soil	SELLGAERSRDYVAELLLFVLITGIAAWPVVSMLMAVIRLVRNY
Ga0310891_103081002	3300031913	Soil	LSSEFFSAETSRDYVAELSFFILITCLAAWPVMSMLIAVFRMIRNY
Ga0308175_1019935901	3300031938	Soil	FHELSSEFLGGETSRDYVAELLFFILITGIAAWPVVSMLIAVIRLIRNY
Ga0310884_109292381	3300031944	Soil	AETSRDYVAELLFFILITGIAAWPIMSMLIAVIRMIRNY
Ga0307471_1035183192	3300032180	Hardwood Forest Soil	HKLSSEYLGAEASRDYVAELLFFLLIIGIAAWPLMSMLIAVIRMIRNY
Ga0310811_103167031	3300033475	Soil	SRDYIAELFFFILITGIAAWPVMSMLIAVTRLIRNY
Ga0310811_114208542	3300033475	Soil	FLGGETSRDFVAELLFFILIAGLAVWPILSMLIAVVRLIRNY
Ga0247830_114463872	3300033551	Soil	FHKLSSKFFGAETSRDYVAELLFFILITGIAAWPVVSMLIAVIRMIRNY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045211

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences