Metagenome / Metatranscriptome Family F045309

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F045309
Family Type	Metagenome / Metatranscriptome
Number of Sequences	153
Average Sequence Length	52 residues
Representative Sequence	MKINKGYIAVGLIIAFALFFELGAHADESDQATTITFSQPIQIPGQVLP
Number of Associated Samples	114
Number of Associated Scaffolds	153

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.97 %
% of genes near scaffold ends (potentially truncated)	94.77 %
% of genes from short scaffolds (< 2000 bps)	90.85 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (72.549 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (22.876 % of family members)
Environment Ontology (ENVO)	Unclassified (31.373 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.673 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 27.27% β-sheet: 5.19% Coil/Unstructured: 67.53%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 153 Family Scaffolds
PF02954	HTH_8	19.61
PF13180	PDZ_2	1.96
PF13185	GAF_2	1.96
PF11453	DUF2950	1.31
PF00158	Sigma54_activat	1.31
PF00248	Aldo_ket_red	0.65
PF05275	CopB	0.65
PF04366	Ysc84	0.65
PF10431	ClpB_D2-small	0.65
PF11737	DUF3300	0.65
PF13429	TPR_15	0.65
PF08308	PEGA	0.65
PF13365	Trypsin_2	0.65
PF07732	Cu-oxidase_3	0.65
PF16656	Pur_ac_phosph_N	0.65
PF04542	Sigma70_r2	0.65
PF02738	MoCoBD_1	0.65

COG ID	Name	Functional Category	% Frequency in 153 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.65
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.65
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.65
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.65
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.65
COG3667	Uncharacterized conserved protein involved in copper resistance	Inorganic ion transport and metabolism [P]	0.65
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.55 %
Unclassified	root	N/A	27.45 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.55 %
Unclassified	root	N/A	27.45 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.55 %
Unclassified	root	N/A	27.45 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	48.37 %
Unclassified	root	N/A	27.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.45 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	26.80 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.45 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.80 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.45 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.80 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.45 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.80 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.45 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.80 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.45 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.80 %
Sorangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.45 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.80 %
Sorangium cellulosum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001144\|JGI12645J13327_103405	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300001593\|JGI12635J15846_10535282	All Organisms → cellular organisms → Bacteria → Acidobacteria	687	Open in IMG/M
3300001661\|JGI12053J15887_10461136	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300001661\|JGI12053J15887_10471066	Not Available	600	Open in IMG/M
3300001686\|C688J18823_10861927	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300002245\|JGIcombinedJ26739_101845055	Not Available	506	Open in IMG/M
3300003505\|JGIcombinedJ51221_10152118	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300004091\|Ga0062387_100388712	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	935	Open in IMG/M
3300005167\|Ga0066672_10995401	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300005171\|Ga0066677_10757821	All Organisms → cellular organisms → Bacteria → Acidobacteria	539	Open in IMG/M
3300005179\|Ga0066684_10967353	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300005332\|Ga0066388_100047864	All Organisms → cellular organisms → Bacteria → Proteobacteria	4342	Open in IMG/M
3300005332\|Ga0066388_107198290	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300005437\|Ga0070710_11292598	Not Available	542	Open in IMG/M
3300005439\|Ga0070711_101549367	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300005439\|Ga0070711_101764569	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300005468\|Ga0070707_101908952	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300005529\|Ga0070741_10727627	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	873	Open in IMG/M
3300005540\|Ga0066697_10827320	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300005542\|Ga0070732_10095340	All Organisms → cellular organisms → Bacteria	1750	Open in IMG/M
3300005542\|Ga0070732_10914729	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300005542\|Ga0070732_10932630	Not Available	530	Open in IMG/M
3300005542\|Ga0070732_10973740	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300005591\|Ga0070761_10647464	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300005614\|Ga0068856_100728053	All Organisms → cellular organisms → Bacteria → Proteobacteria	1012	Open in IMG/M
3300005712\|Ga0070764_10999784	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300006102\|Ga0075015_100276440	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300006173\|Ga0070716_100627563	Not Available	812	Open in IMG/M
3300006173\|Ga0070716_100661799	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	793	Open in IMG/M
3300006173\|Ga0070716_101453868	Not Available	559	Open in IMG/M
3300006797\|Ga0066659_11475628	Not Available	569	Open in IMG/M
3300006800\|Ga0066660_11374467	Not Available	553	Open in IMG/M
3300006852\|Ga0075433_10714880	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300006904\|Ga0075424_100142850	All Organisms → cellular organisms → Bacteria	2535	Open in IMG/M
3300007258\|Ga0099793_10368227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300009143\|Ga0099792_11208317	Not Available	513	Open in IMG/M
3300011269\|Ga0137392_10897345	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300011269\|Ga0137392_11362421	Not Available	568	Open in IMG/M
3300011270\|Ga0137391_10669439	All Organisms → cellular organisms → Bacteria → Acidobacteria	865	Open in IMG/M
3300012200\|Ga0137382_10512071	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	853	Open in IMG/M
3300012200\|Ga0137382_10690922	Not Available	731	Open in IMG/M
3300012202\|Ga0137363_11112321	All Organisms → cellular organisms → Bacteria → Acidobacteria	672	Open in IMG/M
3300012202\|Ga0137363_11714026	Not Available	521	Open in IMG/M
3300012205\|Ga0137362_10138762	All Organisms → cellular organisms → Bacteria	2072	Open in IMG/M
3300012207\|Ga0137381_10800095	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	817	Open in IMG/M
3300012210\|Ga0137378_11089829	Not Available	713	Open in IMG/M
3300012211\|Ga0137377_10891251	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	821	Open in IMG/M
3300012349\|Ga0137387_10323392	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1116	Open in IMG/M
3300012361\|Ga0137360_11060165	Not Available	700	Open in IMG/M
3300012362\|Ga0137361_10994979	All Organisms → cellular organisms → Bacteria → Acidobacteria	758	Open in IMG/M
3300012362\|Ga0137361_11768306	Not Available	537	Open in IMG/M
3300012363\|Ga0137390_10688032	All Organisms → cellular organisms → Bacteria → Acidobacteria	985	Open in IMG/M
3300012363\|Ga0137390_11182797	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300012683\|Ga0137398_10526693	Not Available	814	Open in IMG/M
3300012917\|Ga0137395_10529532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	850	Open in IMG/M
3300012929\|Ga0137404_12278246	Not Available	507	Open in IMG/M
3300012930\|Ga0137407_10468339	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1174	Open in IMG/M
3300012930\|Ga0137407_10597979	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300012944\|Ga0137410_10805578	All Organisms → cellular organisms → Bacteria → Acidobacteria	789	Open in IMG/M
3300015264\|Ga0137403_10334785	All Organisms → cellular organisms → Bacteria → Acidobacteria	1403	Open in IMG/M
3300015264\|Ga0137403_10841540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	770	Open in IMG/M
3300018468\|Ga0066662_10002773	All Organisms → cellular organisms → Bacteria	8299	Open in IMG/M
3300019885\|Ga0193747_1061108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	933	Open in IMG/M
3300020170\|Ga0179594_10084453	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300020579\|Ga0210407_10023801	All Organisms → cellular organisms → Bacteria	4554	Open in IMG/M
3300020579\|Ga0210407_10461819	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300020581\|Ga0210399_10617221	Not Available	896	Open in IMG/M
3300020581\|Ga0210399_11546331	Not Available	513	Open in IMG/M
3300021046\|Ga0215015_10039804	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300021086\|Ga0179596_10567496	All Organisms → cellular organisms → Bacteria → Acidobacteria	576	Open in IMG/M
3300021088\|Ga0210404_10259833	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300021088\|Ga0210404_10357059	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	812	Open in IMG/M
3300021168\|Ga0210406_10347020	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300021170\|Ga0210400_10461871	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1048	Open in IMG/M
3300021170\|Ga0210400_11143741	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300021171\|Ga0210405_10173680	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1708	Open in IMG/M
3300021171\|Ga0210405_10448337	All Organisms → cellular organisms → Bacteria → Acidobacteria	1014	Open in IMG/M
3300021171\|Ga0210405_11262804	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300021178\|Ga0210408_11162339	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300021180\|Ga0210396_10086995	All Organisms → cellular organisms → Bacteria	2835	Open in IMG/M
3300021181\|Ga0210388_11280454	Not Available	619	Open in IMG/M
3300021402\|Ga0210385_10841161	Not Available	704	Open in IMG/M
3300021404\|Ga0210389_10106844	All Organisms → cellular organisms → Bacteria	2158	Open in IMG/M
3300021404\|Ga0210389_10474356	All Organisms → cellular organisms → Bacteria → Acidobacteria	985	Open in IMG/M
3300021404\|Ga0210389_10642223	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	833	Open in IMG/M
3300021433\|Ga0210391_10910464	Not Available	686	Open in IMG/M
3300021474\|Ga0210390_10176134	All Organisms → cellular organisms → Bacteria	1806	Open in IMG/M
3300021474\|Ga0210390_10239462	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	1536	Open in IMG/M
3300021475\|Ga0210392_11049298	All Organisms → cellular organisms → Bacteria → Acidobacteria	610	Open in IMG/M
3300021479\|Ga0210410_10023628	All Organisms → cellular organisms → Bacteria	5308	Open in IMG/M
3300021559\|Ga0210409_11459568	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300022557\|Ga0212123_10330723	Not Available	1051	Open in IMG/M
3300022722\|Ga0242657_1247932	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300025414\|Ga0208935_1042581	Not Available	604	Open in IMG/M
3300025898\|Ga0207692_11050905	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300025910\|Ga0207684_10201874	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1715	Open in IMG/M
3300025916\|Ga0207663_11390737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300025922\|Ga0207646_11950104	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300026322\|Ga0209687_1063220	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1202	Open in IMG/M
3300026324\|Ga0209470_1254787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	701	Open in IMG/M
3300026333\|Ga0209158_1063754	All Organisms → cellular organisms → Bacteria	1468	Open in IMG/M
3300026515\|Ga0257158_1124202	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300026527\|Ga0209059_1349137	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300026557\|Ga0179587_10526646	All Organisms → cellular organisms → Bacteria → Acidobacteria	776	Open in IMG/M
3300027034\|Ga0209730_1045370	Not Available	514	Open in IMG/M
3300027371\|Ga0209418_1010489	All Organisms → cellular organisms → Bacteria	1443	Open in IMG/M
3300027371\|Ga0209418_1086861	Not Available	561	Open in IMG/M
3300027439\|Ga0209332_1017532	All Organisms → cellular organisms → Bacteria	1394	Open in IMG/M
3300027548\|Ga0209523_1061328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	772	Open in IMG/M
3300027548\|Ga0209523_1090488	All Organisms → cellular organisms → Bacteria → Acidobacteria	632	Open in IMG/M
3300027583\|Ga0209527_1060671	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	852	Open in IMG/M
3300027663\|Ga0208990_1142200	All Organisms → cellular organisms → Bacteria → Acidobacteria	639	Open in IMG/M
3300027795\|Ga0209139_10076722	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300027842\|Ga0209580_10218544	All Organisms → cellular organisms → Bacteria → Acidobacteria	946	Open in IMG/M
3300027842\|Ga0209580_10669569	Not Available	513	Open in IMG/M
3300027846\|Ga0209180_10745750	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300027855\|Ga0209693_10600577	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300027862\|Ga0209701_10471675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300027869\|Ga0209579_10427412	Not Available	718	Open in IMG/M
3300027908\|Ga0209006_11277332	All Organisms → cellular organisms → Bacteria → Acidobacteria	569	Open in IMG/M
3300028047\|Ga0209526_10177847	All Organisms → cellular organisms → Bacteria	1481	Open in IMG/M
3300028047\|Ga0209526_10580134	All Organisms → cellular organisms → Bacteria → Acidobacteria	721	Open in IMG/M
3300028047\|Ga0209526_10598043	Not Available	707	Open in IMG/M
3300028536\|Ga0137415_10654571	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	862	Open in IMG/M
3300028536\|Ga0137415_10896777	All Organisms → cellular organisms → Bacteria → Acidobacteria	697	Open in IMG/M
3300028906\|Ga0308309_11482778	Not Available	580	Open in IMG/M
3300030998\|Ga0073996_11463838	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300031122\|Ga0170822_15125583	Not Available	677	Open in IMG/M
3300031128\|Ga0170823_13043143	All Organisms → cellular organisms → Bacteria	1555	Open in IMG/M
3300031446\|Ga0170820_15917865	Not Available	525	Open in IMG/M
3300031708\|Ga0310686_119810466	Not Available	1009	Open in IMG/M
3300031715\|Ga0307476_10107366	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1976	Open in IMG/M
3300031718\|Ga0307474_10821593	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300031718\|Ga0307474_10933916	Not Available	687	Open in IMG/M
3300031718\|Ga0307474_10964473	Not Available	675	Open in IMG/M
3300031720\|Ga0307469_10039477	All Organisms → cellular organisms → Bacteria → Acidobacteria	2850	Open in IMG/M
3300031720\|Ga0307469_10166390	All Organisms → cellular organisms → Bacteria	1675	Open in IMG/M
3300031753\|Ga0307477_10137560	All Organisms → cellular organisms → Bacteria	1704	Open in IMG/M
3300031753\|Ga0307477_10786455	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300031754\|Ga0307475_10146772	All Organisms → cellular organisms → Bacteria → Acidobacteria	1871	Open in IMG/M
3300031754\|Ga0307475_10351484	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300031820\|Ga0307473_10820732	Not Available	665	Open in IMG/M
3300031946\|Ga0310910_10535946	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	929	Open in IMG/M
3300032001\|Ga0306922_10851661	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	950	Open in IMG/M
3300032174\|Ga0307470_10712254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	766	Open in IMG/M
3300032174\|Ga0307470_10717399	Not Available	764	Open in IMG/M
3300032180\|Ga0307471_102801676	Not Available	619	Open in IMG/M
3300032205\|Ga0307472_100054150	All Organisms → cellular organisms → Bacteria	2520	Open in IMG/M
3300032205\|Ga0307472_100582238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	984	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.04%
Host-Associated	Host-Associated	1.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.77%
Aquatic	Environmental → Aquatic	3.27%
Plants	Host-Associated → Plants	1.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.77%
Freshwater	Environmental → Aquatic → Freshwater	1.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.31%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.65%
Sediment	Environmental → Aquatic → Sediment	0.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.28%
Loam	Environmental → Terrestrial → Soil → Loam	25.49%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.31%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.65%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.07%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.54%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.31%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.31%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.65%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	22.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	11.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	11.11%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.88%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.23%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.96%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.31%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.31%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.31%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.65%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.65%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001144	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025414	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027034	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030998	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12645J13327_1034053	3300001144	Forest Soil	MKINKSYIAVGLIIALSLFFGLTAHADETDESTTITFSQPIQIPGR
JGI12635J15846_105352822	3300001593	Forest Soil	MKINKGYIVVGLIIAFTLIFELAAHADEFDHAAKITFTQPVQIPGQVLPTGTYLFELADHGTET
JGI12053J15887_104611362	3300001661	Forest Soil	MKIHKLYITFGLMIALVLFFELAAHADETRETTEITFSAPIQIPGRVLPAGTYTFR
JGI12053J15887_104710662	3300001661	Forest Soil	MKINKGFIAVGLIIAFALFFELVAHADEFDQSTTITFSQPIQIPGQ
C688J18823_108619273	3300001686	Soil	MKIHKTYIAAGMIIALALFLELAAHADDNLQETEITFNQPVQIPGQILPAGTYLFKQINGENLDIVQIFSS
JGIcombinedJ26739_1018450551	3300002245	Forest Soil	VKINKVYIVIGLIIAFTLIVELAAHADEFDHATVITFTQPVQIPRQVL
JGIcombinedJ51221_101521183	3300003505	Forest Soil	MKINKGYIAIGLVIAFALFFELAAHADESDEATFMSFSAPVQIPGHVLPSGTYLFEL
Ga0062387_1003887121	3300004091	Bog Forest Soil	VNIHKTYIVIGLIIAMSMFLGLVAHADETDQATKISFSEPVQIPGQVLPAGTYLFKVLNG
Ga0066672_109954011	3300005167	Soil	MKISKRYIAVGMIIAFTLFFELAAHADESNQATTITFSQPIQIPGQIL
Ga0066677_107578211	3300005171	Soil	MKISKRYIAVGMIIAFTLFFELAAHADESNQATTITFSQPIQIPGQILPAGT
Ga0066684_109673532	3300005179	Soil	MKINKGYIAVGLVIAFALFFELAAHADESDEATIMSFSAPVQIPGQVLPVGTYLFELADHGSEPNVVQVFSSDRAK
Ga0066388_1000478643	3300005332	Tropical Forest Soil	MERINKAYLLIGLVIATVLFFELAAHAKPLGQATTITLSQPVQVPGHTLAAGVTRP*
Ga0066388_1071982902	3300005332	Tropical Forest Soil	MKINKVYFAIGMIIAFGLLFELAAHADEFNEQATITFSAPVQ
Ga0070710_112925981	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MKMHKSYIVVGLIIAFSLFFELAAHADDSIQETKITFSQPISIPG
Ga0070711_1015493671	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKINKFYIVLGLLVAFGMFFEIAAYADESNEFTKVTFSAPFQIPGQVLPSGTYSFQRASNDDL
Ga0070711_1017645691	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKMHKSYIVVGLIIAFSLFFELAAHADESLQETEITFSQPISIPGQTLPAGTYLLKQANVDDLNLIQI
Ga0070707_1011082922	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRINKLSIVLGLVIAFGLFFEFAAHADEMNESTKITFSAPV
Ga0070707_1019089521	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKIHKIYIVVGMIIALALFLEIAAHADDVLQATEITFNQPIQISGQILPAGTYLFKQASSDNPDV
Ga0070741_107276271	3300005529	Surface Soil	MKLHKLYIVLGMVLAFGLFFELVAHADAADQATTITFSAAV
Ga0066697_108273203	3300005540	Soil	MKINLRYIAVGMIIAFTLLFELAAHADESNQATTITFSQPIQIPGQILPAGT
Ga0070732_100953401	3300005542	Surface Soil	MKIHKLYIALGLLIAFGVFFELTAHADETNELTKITFSAPIQIPGQVLPAGTYIFQQ
Ga0070732_109147291	3300005542	Surface Soil	MNINKGYIAVGLVIAFALFFELGAHADESDEATFLSFNAPVQIPGQVLPAGAYLFELADHGS
Ga0070732_109326302	3300005542	Surface Soil	MRINKLYIVLGMLIAFGVFFELAAHADEANEATTITFSA
Ga0070732_109737401	3300005542	Surface Soil	MKINKGYIAVGLIIAFALFFELGAHADESDEATTMSFSQPIQIPGKVLPAGTYLFELANHGDEPNI
Ga0070761_106474641	3300005591	Soil	MKTNKGYIILGLMIALSLFFELAAHAEPMDQRTKLTFSEPIQIPGEVLAAGTYLFRLADGDSG
Ga0068856_1007280531	3300005614	Corn Rhizosphere	MKMHKSYIVVGLIIAFSLFFELAAHADESLQETEITFSQPISIPGQTLPAGTYLLKQANVDDLNLIQIF
Ga0070764_109997843	3300005712	Soil	MKINKSYIAVGLIIALSLFFGLTAHADETDESTTITFSQPIQIPGRV
Ga0075015_1002764403	3300006102	Watersheds	MKISKSYIVVGLIIAFSLFFELAAHADELDQATTITFSAPIQIPGKVLP
Ga0070716_1006275631	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKIQKIYIALGLMIAFVLFFEFAAHADEIDESTKITFSAQIQIPGRVLPAGTY
Ga0070716_1006617991	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKMHKSYIVVGLIIAFSLFFELAAHADDSIQETKITFS
Ga0070716_1014538682	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MRINRLYIALGFVIAFAMFFEIAAHADETNELTRITFNAP
Ga0070712_1007279663	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRINKLYIILGMLIALGVFFELAAHADEANEATTITFSAPVQIPG
Ga0066659_114756281	3300006797	Soil	MNTHKTYIIIGLIIAFAAFFELTAHADELKQATILTFSQPIQVPGKVLPAGT
Ga0066660_113744672	3300006800	Soil	MKINKGYIAVGLVIAFALFFELAAHADESDEATLMSFSAPVQIPGQVLP
Ga0075433_107148803	3300006852	Populus Rhizosphere	MKIHKLYIVLGLLIALGVFFELAAHADDTNEFTKITFGAPVQIPGQVLPAGTYIFQQA
Ga0075424_1001428503	3300006904	Populus Rhizosphere	MRINKIYIAIGLVIAFGLFFELAAHADAFDEQATITFSSPVQIPGQVLPAGTYIFQ
Ga0099793_103682273	3300007258	Vadose Zone Soil	MKINKGYIAVGLIIAFALFFELVAHADEFDQSTTITFSEPIQIPGQV
Ga0099792_112083171	3300009143	Vadose Zone Soil	MKTNKAYFLIGLIIASALFFEVAAHADEYDLTTKLTFSQPIQIPGKVLPAGSYL
Ga0137392_108973451	3300011269	Vadose Zone Soil	MNKMKINKGYIILGLIIAFTLFFELAAHADAWDQATTITFGEPIQ
Ga0137392_113624212	3300011269	Vadose Zone Soil	MKIHKGYIIVGLIIAFALFFELAAHADESDLNTTITFNEPIQIPGQVLAAG
Ga0137391_106694392	3300011270	Vadose Zone Soil	MKINKSYIVVGLIIAFALIFELVAHADAGDQLSIVTFSAPIQIPGQVLPAGTY
Ga0137382_105120711	3300012200	Vadose Zone Soil	MNQMKIHKTYIAVGLIIAFALFVEIAAHADEADQATKISFSQPIQVPGQILPAGTYLFKLTNT
Ga0137382_106909221	3300012200	Vadose Zone Soil	MKIHKSYIAVGMIIAFTLFFELAAHADEQDQETKITFSQAIQVPGQILPAGTYLFKLTNT
Ga0137363_111123211	3300012202	Vadose Zone Soil	MKTNRGYIILGLIIAFTLFFELAAHADVRDQATTMTFSAPIQIPGQILPAGTYLFRLANP
Ga0137363_117140261	3300012202	Vadose Zone Soil	MKVQKTYIIIGLIIAFAAFFELTAHADELDQTTILTFSQPVEIP
Ga0137362_101387622	3300012205	Vadose Zone Soil	MRIHKIYIAIGLVLAFSLFFELAAHADEANQETIFTFNEPVQIPGAVLTWPSDC*
Ga0137381_108000951	3300012207	Vadose Zone Soil	MKINKGYIAIGLVIAFALFFELAAHADESDEATFMSFSAPVQIPGHVLPSGTYL
Ga0137378_110898291	3300012210	Vadose Zone Soil	MNQMKIHKTYIAVGMIIALALFFELAAHADDNLQETEIT
Ga0137377_108912513	3300012211	Vadose Zone Soil	MKIHKTYIAVGLIIAFALFVEIAAHADEADQATKISFSQPIQVPGQVLPSGTYLFTLANTDDLNMVQIFSLDR
Ga0137387_103233924	3300012349	Vadose Zone Soil	MNQMKIHKTYIAVGMIIALALFFELAAHADDNLQETEITFNQPVQIPGQILPAGTYLFKQINGEDLDVVQIF
Ga0137360_110601651	3300012361	Vadose Zone Soil	MKINKSYIVLGLIIAFTLIFELVAHADAGDQLSIVTFSAP
Ga0137361_109949792	3300012362	Vadose Zone Soil	MKINKGYIAVGLIIAFALFFELVAHADEFDQSTTITFSEPIQIPGQILPAG
Ga0137361_117683061	3300012362	Vadose Zone Soil	MKIHKTYIAVGLIIAFALFVEIAAHADEADQATKISFSQPIQIPGQ
Ga0137390_106880321	3300012363	Vadose Zone Soil	MKINKSYIVLGLIIAFTLIFELVAHADAGDQLSIVTFSAPIQIPGQVLPAGTYL
Ga0137390_111827971	3300012363	Vadose Zone Soil	MKINKRYIAVGLIIAFSLFFGLAAHADESDEATKITFSEPIQ
Ga0137398_105266932	3300012683	Vadose Zone Soil	VKSNANYSKEINKMKVQKGYVIAGLIIAFALLFELAAHADESDLNTRITFSEAIQ
Ga0137395_105295321	3300012917	Vadose Zone Soil	MNKMKINKGYIILGLIIAFTLFFELAAHADAWDQATTITFG
Ga0137396_106970152	3300012918	Vadose Zone Soil	MKINKLYIVIGLIITICTFFALAAHADEANQETIITFSAPVQIPGQ
Ga0137404_122782461	3300012929	Vadose Zone Soil	VQINKLYIIAGLIIALGLFYVLAAHADESDQATTVT
Ga0137407_104683391	3300012930	Vadose Zone Soil	MNTHKTYIIIGLIIAFAAFFELTAHADELKQATILTFSQPIQVPGKVLPAGTYV
Ga0137407_105979791	3300012930	Vadose Zone Soil	MKTNKLYIVVGLIIAFSLFSELAAHADESDQATTITFNQSIQIPGQVLPAGTYLF
Ga0137410_108055781	3300012944	Vadose Zone Soil	MKIQKGYVIVGLIITFALFFELAAHADESDLNTRITFSEPIQIPGQVL
Ga0137403_103347851	3300015264	Vadose Zone Soil	MKIRKTYFIIGLIIAFAAFFEVTAHADELNQTTILTFSQPIQIPGQILPAG
Ga0137403_108415401	3300015264	Vadose Zone Soil	MNTHKTYIIIGLIIAFAAFFELTAHADELKQATILTFSQPIQVP
Ga0066662_100027731	3300018468	Grasslands Soil	MKIHKVYIVVGLIIAFGLFFELVAHADETNEETRITFSQTV
Ga0193747_10611081	3300019885	Soil	MKTNRGYIILGLIIAFTLFFELAAHADVRDQATTMTF
Ga0179594_100844531	3300020170	Vadose Zone Soil	MKIHKTYIVVGLIIAFTAFFELTAHASESDQATTLTFNQPIQIPGQI
Ga0210407_100238011	3300020579	Soil	MKIHKSLIAIGMIVAFTLFFELAAHADEDDQATEITFSQPIQIPGHVLA
Ga0210407_104618193	3300020579	Soil	MNINKGYIAIGLIIAFGLFFELAAHADESDQATTITFSQPIQVPGQVLAAGMYLFELADR
Ga0210399_106172213	3300020581	Soil	MKINKGYIVAGLIIAFSLFFELVAHADESDQATTVTF
Ga0210399_115463311	3300020581	Soil	MKIHKLYITFGLLIALVLFFELAAHADETSESTEITFSAPIQIPGRVLPAGT
Ga0215015_100398042	3300021046	Soil	MKINTSYVILGLIIAFTLIFELVAHADPWDQSSTITFSEPIQIPGQVLPAGTYLFKLAN
Ga0179596_105674961	3300021086	Vadose Zone Soil	MKIHKTYIAVGMIIAFALFFEIAAHAGETDQTTKITFSQPIQVPGKILPAGTYLFSL
Ga0210404_102598331	3300021088	Soil	MKINKGYIAVGLVIAFALFFELGAHADESDEATFISFSAPVQIPGQVLPA
Ga0210404_103570593	3300021088	Soil	MKINKLYIALGLMIAFVLFYDFAAHAGESNESTKVTFSAPIQIP
Ga0210406_103470203	3300021168	Soil	MKINKGYIAIGLVIAFALFFELAAHADESDEATFMSFSAP
Ga0210400_104618713	3300021170	Soil	MKIHKSLIAIGMIVAFTLFFELAAHADEGDQATEITFSQPIQIPGQVL
Ga0210400_111437412	3300021170	Soil	MKINNGYFIVGLIIAFTLFFELAAHADEADQSTTITFSAPIQVPG
Ga0210405_101736802	3300021171	Soil	MKIHKIYITLGLIIAFVLFFEFAAHAEMDESTRITFRSQIQIPGQVLPAGTYSPAGGRQ
Ga0210405_104483373	3300021171	Soil	MKIHKLYIALGLLIAFGVFFELTAHADETNELTKITFSAPIQIPGQVLPAG
Ga0210405_112628041	3300021171	Soil	MKINKGYIVVGLIIAFTLIFELAAHAVYFDHATVITFTQPVQIPGQVVPTGTYLFELADH
Ga0210408_111623391	3300021178	Soil	VRIHKLYIILGMLIAFGVFFELAAHADEANEATTITFSAPVQIPGRVLPAGT
Ga0210396_100869951	3300021180	Soil	MKINKGYIIAGLIIAFSLFFELAAHADEYDQATTFTFSQPIQIP
Ga0210388_112804543	3300021181	Soil	MKINKGYIAVGLIIAFAVFFELAAHADESDQATTITFSE
Ga0210385_108411611	3300021402	Soil	MKINKGYIAVGLIIAFTLIFELAAHADESDHASKITLNQ
Ga0210389_101068441	3300021404	Soil	MKINKGYIAIGLVIAFALFFELAAHADESDQATFMSFSAPVQIPGHVLPAGTYLFELADRGSE
Ga0210389_104743563	3300021404	Soil	MKINRGYIVLGLIIAFTLFFELAAHADEFDQATTLTFSEAIQIPGQVLPAGTYVFQLADS
Ga0210389_106422232	3300021404	Soil	MKIHKLYIALGLLIAFGVFFELTAHADETNELTKITFSAPIQIPGQVLP
Ga0210391_109104641	3300021433	Soil	MKINKAYIAVGLIIAFTLFFEIAAHADESDQATTIAFSQPIRIPGHVLAAGTYLFKT
Ga0210390_101761341	3300021474	Soil	MKINKGYIAVGLIIAFALFFELGAHADESDQATTITFSQPIQIPGQVLP
Ga0210390_102394622	3300021474	Soil	MTINKSYIAVGLIIALSLFFGLAAHADETDESTTISFSQPIQI
Ga0210392_110492981	3300021475	Soil	MKINKGYIAIGLVIAFALFFELAAHADESDEAIFMTFSAPVQIPGHVLPAGSYLFERADRGSEPDVI
Ga0210410_100236281	3300021479	Soil	MKIQKTYIIIGLIIAFAAFFELTAHADELDQTTILTFSQPIQI
Ga0210409_114595682	3300021559	Soil	MKIHKVYIALGLMIAFVLFFEFAAHADEMDESTKITFSAQIQIPGQVLPA
Ga0212123_103307231	3300022557	Iron-Sulfur Acid Spring	MKINASYVIVGLIIAFTLFFELVAHADPWDQSSTITFNEPIQIPGQVLP
Ga0242657_12479321	3300022722	Soil	MKINKGYIVVGLIIAFTLIFELAAHADEFDHATVITFTQPVQIPGQVVPTGTYLFELADHGTETHV
Ga0208935_10425811	3300025414	Peatland	MNIHKVSIAVGLIIALSLFLGLVAHADEADQATTISFSEPVQ
Ga0207692_110509051	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MKINKFYIVLGLLVAFGMFFEIAAYADESNEFTKVTFSAPVQIPGQVLPSGTYSFRRASN
Ga0207684_102018741	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKIHKTYIAVGLIIAFTLFFELAAHASVADQSTEITFNQ
Ga0207663_113907372	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MKINKFYIVLGLLVAFGMFFEIAAYADESNEFTKVTFSAPFQIPGQVLPSGTYSFQRASNDDLDL
Ga0207646_119501041	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MKIHKIYIVVGMIIALALFLEIAAHADDVLQATEITFNQPIQISGQILPAGTYLFKQASSDNPDVMQIFSSDRGHL
Ga0209687_10632202	3300026322	Soil	MKIQKTYIIIGLIIAFAAFFELTAHADESDQTTILTFSQPV
Ga0209470_12547871	3300026324	Soil	MKINKGYIAVGLVIAFALFFELAAHADESDEATLMSFSAPVQIPGQVLPAGTYLFELA
Ga0209158_10637541	3300026333	Soil	MKINKGYIAIGLVIAFALFFELAAHADESDEATFMSFSAPVQIPGHVLPSGTYLF
Ga0257158_11242022	3300026515	Soil	MKINKLYIALGLMIAFVLFYDFAAHAGESNESTKVTFSAPIQIPGQVLPAGTYL
Ga0209059_13491371	3300026527	Soil	MKIHKVYIVVGLIIAFGLFFELVAHADETNEETRI
Ga0179587_105266461	3300026557	Vadose Zone Soil	MKINKLYVILGLIIAFTLFVELVAHADEWDQASTITFSEPIQIPGQVLPAGTYLFKLA
Ga0209730_10453701	3300027034	Forest Soil	MKINKGYIAVGLVIAFALFFELAAHADESNEATFMSFSAPVQIPGRVLPA
Ga0209418_10104891	3300027371	Forest Soil	MKINKFYIVLGLLVAFGMFFEIAAYADESNEFTKVTFSAPVQIPGQVLPSGAYTFQRASNDDLDL
Ga0209418_10868611	3300027371	Forest Soil	MKIQKTYIIIGLIIAFAAFFELTAHADELDQTTILTFSQPIQIPG
Ga0209332_10175321	3300027439	Forest Soil	MKINKGYIIAGMVIAFMLFFEIAAHADMRDQMTILTFSEPVQIPGQVLPAG
Ga0209523_10613283	3300027548	Forest Soil	MKIQKAYIIIGLIVAFAAFFELTAHADELDQTTILTFS
Ga0209523_10904881	3300027548	Forest Soil	MKINKGYILAGLIIAFSLFFELAAHADETDQATTITFSQPIQIPGQVLP
Ga0209527_10606713	3300027583	Forest Soil	MKINKLYIALGLMIAFVLFYDFAAHAGESNESTKVTFSAPIQIPGQVLPAGTYLFQQ
Ga0208990_11422003	3300027663	Forest Soil	MKINKGFIAVGLIIAFALFFELVAHADEFDQSTTITFSQPIQIPGQIL
Ga0209139_100767221	3300027795	Bog Forest Soil	VNIHKTYIVIGLIIAMSMFLGLVAHADETDQATKISFSEPVQIPGQVLP
Ga0209580_102185443	3300027842	Surface Soil	MRINKLYIIFGMLIAFGVFFELAAHADEANEATTITFSAPVQIPGR
Ga0209580_106695692	3300027842	Surface Soil	MKINKGYIAIGLVIAFALFFELAAHADESDEATFMSFSAPVRIPG
Ga0209180_107457501	3300027846	Vadose Zone Soil	MKTNKLYIIVGLIIAFGLFYVLAAQADESDQATTVTFNQPVQIPGQLLPAGTYVFR
Ga0209693_106005771	3300027855	Soil	MKIHKIYITLGLIIAFVLFFEFAAHANETDESTNITFSTPIQIPGQVLPAGTYTFQEAEPYS
Ga0209701_104716751	3300027862	Vadose Zone Soil	MKINKGYIAVGLIIAFALFFELVAHADVFDQSTTITFSEPIQIP
Ga0209579_104274121	3300027869	Surface Soil	MKINKGYIAVGLIIAFTLIFELAAHADESDHASKITLNQSVRIPGQVLPAGSYLFKL
Ga0209006_112773322	3300027908	Forest Soil	MKINKIYIVVGLIIAFTLICELVAHAGESDQTTTITFSQSIQIPGQVLPTGTYVFKLANG
Ga0209526_101778471	3300028047	Forest Soil	MKINKGYIVVGLIIAFFLFFELAAHADEFDQATTITFSEPI
Ga0209526_105801341	3300028047	Forest Soil	MKINKAYIVVGMIIAFVLFFEFAAHADEADQTTEIAFSQPIQIPGQILPSGTYLFKLANTGADLDMVQI
Ga0209526_105980431	3300028047	Forest Soil	MKIHKLYITFGLMIALVLFFELAAHADEASESTEITFSAPIQIPGRVLPAGTY
Ga0137415_106545711	3300028536	Vadose Zone Soil	MKINKGYIAVGLIIAFTLFFELAAHADESDQVTTITFSQPIQIPGQVLPAGTYLFKL
Ga0137415_108967771	3300028536	Vadose Zone Soil	MKFNKTYFIVGFIIALTLFFELSAHADERDYATRITSSQPIQIPGQVLPAGIYLFKL
Ga0308309_114827781	3300028906	Soil	MRINKAYIAVGLIIAFTLFFEIAAHADEVAQATTITFSQPIRIPRRVLAAGTYLFKTVDADSGEHVVQIFS
Ga0073996_114638382	3300030998	Soil	MKINPSYVIVGLIIAFTLIFELVAHADSWDQSSTITFSEPIQIPGQVLPAGTYLFKLAKKKRKKH
Ga0170822_151255831	3300031122	Forest Soil	MKMHKSYIVAGLIIAFSLFFELAAHADDSVQETRITFSQPISISGQTLPAGTYLFKQANVDDLNLIQIFSSDR
Ga0170823_130431431	3300031128	Forest Soil	MKINKGYIILGLMIALTLLFELAAHAEPLDQTTKLTFSEPIQIPGEVLPAGTYLFRL
Ga0170820_159178651	3300031446	Forest Soil	MKINKGYIAIGLVIAFALFFELAAHADESDEATFMSFSAPV
Ga0310686_1198104661	3300031708	Soil	MKINKAYIAVGLIIAFTLFFEIAAHADESDQATTIAFSQP
Ga0307476_101073661	3300031715	Hardwood Forest Soil	MKINKLYIALGLMIAFVLFYDFAAHAGESNESTKVTFSAPIQIPGQVLPAGTY
Ga0307474_108215932	3300031718	Hardwood Forest Soil	MKINKGYIVLGLVLALSLFFGLTAHADESDRSTTLTFSQPIQIPGKVLP
Ga0307474_109339161	3300031718	Hardwood Forest Soil	MRMNKGYIILGLMIALTLFFELAAHADPIDRTTQLTFSEAIQIPGQVLP
Ga0307474_109644732	3300031718	Hardwood Forest Soil	MRINKFYIALGVLIAFALFFELAAHADESNQQTTVTFSAPVQIPGQVLPAGT
Ga0307469_100394771	3300031720	Hardwood Forest Soil	MKTNKGYLIVGLIVAFTLFFEVAAHAELRDQSTKMTFSKPIQIPGQILPAG
Ga0307469_101663903	3300031720	Hardwood Forest Soil	MKINKGYIAVGLVIAFALFFELAAHADESDEATFMSFSAPVQIPGQVLPAGTYLFELADH
Ga0307477_101375603	3300031753	Hardwood Forest Soil	MKINKGYIAVGLIIAFALFFELGAHADESDEATTMSFSQPIQIPGKVLPAGTYLFEL
Ga0307477_107864552	3300031753	Hardwood Forest Soil	MKINKFYIVLGLLVAFGMFFEMAAYADESNEFTKVTFSAPVQIPGQVLPPGTYTLQRAS
Ga0307475_101467723	3300031754	Hardwood Forest Soil	MKIHKTYIVIGLIVAFAAFFELTAHADELDRSTILNFSQPIQAPGQVLPAGTYLFTLTSSDADRN
Ga0307475_103514842	3300031754	Hardwood Forest Soil	MKINKGYIAVGLIIAFTLFFELAAHADEYDEATTMTFSQPVQIPGHVLPAG
Ga0307475_108735302	3300031754	Hardwood Forest Soil	MRINKLYIVIGLVIAFGLFFELAAHADETNELLNITFNAPVQIPGQ
Ga0307473_108207322	3300031820	Hardwood Forest Soil	MRINKLFIALGFVIAFALFFELAAHADEMNESTKITFSAPVQIPGKVL
Ga0310910_105359461	3300031946	Soil	MKIHKLYIILGLLIALGVFFELAAHADDTNEFTKITFGAPVQIPGRVL
Ga0306922_108516613	3300032001	Soil	MRIHKLYIVLGLLIALGVFFELTAHADETKESSQITFSKPVQIPGQVLPAGTYLLE
Ga0307470_107122541	3300032174	Hardwood Forest Soil	MKIHKTSIVIGLIVAFAAFFELTAHAGELDQSTILTF
Ga0307470_107173991	3300032174	Hardwood Forest Soil	MRINRLYIAVGFVIAFAMFFEIAAHADETNQLTRITFNAPVQIPGQVLPAG
Ga0307471_1028016761	3300032180	Hardwood Forest Soil	MKINKGYIVAGLIIAFSLFFELAAHADESDQTTTVTFSQPIQIP
Ga0307472_1000541503	3300032205	Hardwood Forest Soil	MKIQKTYIIIGLIIAFAAFFELTAHADELDQTTILTFSQAIQIPG
Ga0307472_1005822383	3300032205	Hardwood Forest Soil	MKINKFYIVLGLLIAVGMFFEIAAYADESNEFTKLTFSAPVQIPGQVLSPGTYTFQRASNDDLDF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045309

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences