Metagenome / Metatranscriptome Family F045383

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F045383
Family Type	Metagenome / Metatranscriptome
Number of Sequences	153
Average Sequence Length	46 residues
Representative Sequence	GPVVVRGTFNLGVIADTIVGPIALAGSVSPTGQSRVNFSIGRLF
Number of Associated Samples	123
Number of Associated Scaffolds	153

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	97.39 %
% of genes from short scaffolds (< 2000 bps)	86.93 %
Associated GOLD sequencing projects	116
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.967 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.647 % of family members)
Environment Ontology (ENVO)	Unclassified (28.758 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.399 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 34.72% Coil/Unstructured: 65.28%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 153 Family Scaffolds
PF02129	Peptidase_S15	22.22
PF10041	DUF2277	18.95
PF00107	ADH_zinc_N	13.07
PF11838	ERAP1_C	6.54
PF08240	ADH_N	4.58
PF08530	PepX_C	4.58
PF01979	Amidohydro_1	1.96
PF02954	HTH_8	1.31
PF00883	Peptidase_M17	1.31
PF11731	Cdd1	1.31
PF02789	Peptidase_M17_N	1.31
PF04055	Radical_SAM	0.65
PF01636	APH	0.65
PF13701	DDE_Tnp_1_4	0.65
PF04069	OpuAC	0.65
PF02371	Transposase_20	0.65
PF13384	HTH_23	0.65
PF01175	Urocanase	0.65
PF08534	Redoxin	0.65
PF02518	HATPase_c	0.65
PF00069	Pkinase	0.65
PF01649	Ribosomal_S20p	0.65
PF12867	DinB_2	0.65

COG ID	Name	Functional Category	% Frequency in 153 Family Scaffolds
COG2936	Predicted acyl esterase	General function prediction only [R]	4.58
COG0260	Leucyl aminopeptidase	Amino acid transport and metabolism [E]	2.61
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.61
COG0268	Ribosomal protein S20	Translation, ribosomal structure and biogenesis [J]	0.65
COG2987	Urocanate hydratase	Amino acid transport and metabolism [E]	0.65
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.97 %
Unclassified	root	N/A	15.03 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.97 %
Unclassified	root	N/A	15.03 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.97 %
Unclassified	root	N/A	15.03 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	49.02 %
Unclassified	root	N/A	15.03 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.23 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	30.72 %
Unclassified	root	N/A	15.03 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	11.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.72 %
Unclassified	root	N/A	15.03 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	11.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.72 %
Unclassified	root	N/A	15.03 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.72 %
Unclassified	root	N/A	15.03 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	1.96 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.65 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.72 %
Unclassified	root	N/A	15.03 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	1.31 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.65 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.65 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001170\|JGI12704J13340_1011543	Not Available	715	Open in IMG/M
3300001867\|JGI12627J18819_10407740	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300004152\|Ga0062386_100406175	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300004633\|Ga0066395_10345072	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	826	Open in IMG/M
3300005436\|Ga0070713_100272912	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1549	Open in IMG/M
3300005436\|Ga0070713_101357896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300005533\|Ga0070734_10186020	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300005537\|Ga0070730_10664413	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300005538\|Ga0070731_10220178	All Organisms → cellular organisms → Bacteria	1260	Open in IMG/M
3300005541\|Ga0070733_10208935	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1278	Open in IMG/M
3300005542\|Ga0070732_10505662	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300005598\|Ga0066706_10118070	All Organisms → cellular organisms → Bacteria	1954	Open in IMG/M
3300005764\|Ga0066903_106363005	Not Available	616	Open in IMG/M
3300005921\|Ga0070766_10280488	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300006052\|Ga0075029_100041263	All Organisms → cellular organisms → Bacteria	2648	Open in IMG/M
3300006059\|Ga0075017_100033176	All Organisms → cellular organisms → Bacteria	3408	Open in IMG/M
3300006086\|Ga0075019_10061023	All Organisms → cellular organisms → Bacteria	2133	Open in IMG/M
3300006086\|Ga0075019_11073805	Not Available	522	Open in IMG/M
3300006102\|Ga0075015_100321212	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	857	Open in IMG/M
3300006102\|Ga0075015_100374092	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300006163\|Ga0070715_10918983	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	540	Open in IMG/M
3300006174\|Ga0075014_100065072	All Organisms → cellular organisms → Bacteria → Acidobacteria	1610	Open in IMG/M
3300006176\|Ga0070765_102041321	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	536	Open in IMG/M
3300009090\|Ga0099827_10011845	All Organisms → cellular organisms → Bacteria	5684	Open in IMG/M
3300009520\|Ga0116214_1324729	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300009521\|Ga0116222_1418887	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300009522\|Ga0116218_1398715	All Organisms → cellular organisms → Bacteria → Acidobacteria	614	Open in IMG/M
3300009522\|Ga0116218_1549540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300009616\|Ga0116111_1134532	All Organisms → cellular organisms → Bacteria → Proteobacteria	597	Open in IMG/M
3300009638\|Ga0116113_1006557	All Organisms → cellular organisms → Bacteria	2371	Open in IMG/M
3300009698\|Ga0116216_10071918	Not Available	2128	Open in IMG/M
3300009698\|Ga0116216_10951161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300009824\|Ga0116219_10832944	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300009839\|Ga0116223_10032168	All Organisms → cellular organisms → Bacteria	3550	Open in IMG/M
3300009839\|Ga0116223_10271148	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1019	Open in IMG/M
3300009839\|Ga0116223_10288645	Not Available	982	Open in IMG/M
3300010048\|Ga0126373_11802604	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300010048\|Ga0126373_13122191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300010343\|Ga0074044_10155652	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1528	Open in IMG/M
3300010358\|Ga0126370_10001530	All Organisms → cellular organisms → Bacteria	10588	Open in IMG/M
3300010366\|Ga0126379_11457473	All Organisms → cellular organisms → Bacteria → Proteobacteria	790	Open in IMG/M
3300010379\|Ga0136449_100322560	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	2797	Open in IMG/M
3300010379\|Ga0136449_100436436	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2305	Open in IMG/M
3300010379\|Ga0136449_100816479	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1537	Open in IMG/M
3300010379\|Ga0136449_101680461	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	958	Open in IMG/M
3300011120\|Ga0150983_10941151	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300012096\|Ga0137389_10156673	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1868	Open in IMG/M
3300012209\|Ga0137379_10655906	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	955	Open in IMG/M
3300012210\|Ga0137378_11789191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300012349\|Ga0137387_11059096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300012519\|Ga0157352_1048407	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300012683\|Ga0137398_10920158	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300012948\|Ga0126375_10417927	All Organisms → cellular organisms → Bacteria → Proteobacteria	975	Open in IMG/M
3300012957\|Ga0164303_11040996	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300012971\|Ga0126369_10261755	All Organisms → cellular organisms → Bacteria	1709	Open in IMG/M
3300012971\|Ga0126369_10896832	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	972	Open in IMG/M
3300014638\|Ga0181536_10194844	Not Available	1015	Open in IMG/M
3300014654\|Ga0181525_10158968	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300017823\|Ga0187818_10075455	All Organisms → cellular organisms → Bacteria → Acidobacteria	1452	Open in IMG/M
3300017933\|Ga0187801_10077023	All Organisms → cellular organisms → Bacteria → Acidobacteria	1242	Open in IMG/M
3300017933\|Ga0187801_10409114	All Organisms → cellular organisms → Bacteria → Proteobacteria	565	Open in IMG/M
3300017970\|Ga0187783_10059741	All Organisms → cellular organisms → Bacteria	2812	Open in IMG/M
3300017972\|Ga0187781_10616949	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	782	Open in IMG/M
3300017975\|Ga0187782_10460120	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300017975\|Ga0187782_10825579	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300017975\|Ga0187782_11555846	Not Available	522	Open in IMG/M
3300018004\|Ga0187865_1153457	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300018006\|Ga0187804_10581500	Not Available	508	Open in IMG/M
3300018009\|Ga0187884_10006084	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8212	Open in IMG/M
3300018013\|Ga0187873_1067915	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300018042\|Ga0187871_10605288	All Organisms → cellular organisms → Bacteria → Acidobacteria	608	Open in IMG/M
3300018042\|Ga0187871_10695305	Not Available	566	Open in IMG/M
3300018062\|Ga0187784_10150117	Not Available	1904	Open in IMG/M
3300018085\|Ga0187772_10540550	All Organisms → cellular organisms → Bacteria → Acidobacteria	825	Open in IMG/M
3300018086\|Ga0187769_11351456	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300020199\|Ga0179592_10471764	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300020579\|Ga0210407_10189403	All Organisms → cellular organisms → Bacteria	1596	Open in IMG/M
3300020579\|Ga0210407_10712749	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300020579\|Ga0210407_10968677	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300020581\|Ga0210399_10611710	All Organisms → cellular organisms → Bacteria → Proteobacteria	901	Open in IMG/M
3300020583\|Ga0210401_10024929	All Organisms → cellular organisms → Bacteria	5718	Open in IMG/M
3300021168\|Ga0210406_10836454	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300021170\|Ga0210400_11545462	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300021178\|Ga0210408_10874332	Not Available	701	Open in IMG/M
3300021401\|Ga0210393_11212398	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300021401\|Ga0210393_11409759	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	556	Open in IMG/M
3300021404\|Ga0210389_10482491	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	975	Open in IMG/M
3300021405\|Ga0210387_11708607	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300021406\|Ga0210386_10546111	Not Available	1001	Open in IMG/M
3300021407\|Ga0210383_10516431	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300021407\|Ga0210383_10575084	Not Available	972	Open in IMG/M
3300021407\|Ga0210383_11313600	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300021420\|Ga0210394_10780103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	835	Open in IMG/M
3300021420\|Ga0210394_10920340	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	760	Open in IMG/M
3300021474\|Ga0210390_10381415	All Organisms → cellular organisms → Bacteria → Proteobacteria	1192	Open in IMG/M
3300021474\|Ga0210390_10442981	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300021475\|Ga0210392_10967026	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300021477\|Ga0210398_10675904	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	836	Open in IMG/M
3300021477\|Ga0210398_11621065	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300021478\|Ga0210402_11369562	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300021559\|Ga0210409_10559657	All Organisms → cellular organisms → Bacteria → Acidobacteria	1010	Open in IMG/M
3300021559\|Ga0210409_10648600	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	925	Open in IMG/M
3300022732\|Ga0224569_107686	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	777	Open in IMG/M
3300024227\|Ga0228598_1017871	All Organisms → cellular organisms → Bacteria → Acidobacteria	1399	Open in IMG/M
3300024227\|Ga0228598_1083805	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300025404\|Ga0208936_1058216	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300025527\|Ga0208714_1087428	Not Available	628	Open in IMG/M
3300025612\|Ga0208691_1019480	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1619	Open in IMG/M
3300025939\|Ga0207665_10419218	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1022	Open in IMG/M
3300027045\|Ga0207726_1019322	Not Available	1058	Open in IMG/M
3300027073\|Ga0208366_1014797	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	842	Open in IMG/M
3300027117\|Ga0209732_1071201	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300027545\|Ga0209008_1040177	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300027610\|Ga0209528_1017898	Not Available	1553	Open in IMG/M
3300027660\|Ga0209736_1182464	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300027824\|Ga0209040_10395601	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300027824\|Ga0209040_10514406	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300027842\|Ga0209580_10034821	All Organisms → cellular organisms → Bacteria	2302	Open in IMG/M
3300027842\|Ga0209580_10310311	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300027842\|Ga0209580_10462278	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300027854\|Ga0209517_10016543	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7296	Open in IMG/M
3300027855\|Ga0209693_10173818	Not Available	1063	Open in IMG/M
3300027869\|Ga0209579_10143560	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1271	Open in IMG/M
3300027889\|Ga0209380_10855059	Not Available	513	Open in IMG/M
3300027905\|Ga0209415_10964172	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300028047\|Ga0209526_10698563	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300028759\|Ga0302224_10445008	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300029952\|Ga0311346_10094596	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3871	Open in IMG/M
3300030013\|Ga0302178_10489321	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300030043\|Ga0302306_10311196	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300030058\|Ga0302179_10219014	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300030399\|Ga0311353_10578939	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	984	Open in IMG/M
3300030520\|Ga0311372_11636918	All Organisms → cellular organisms → Bacteria → Proteobacteria	781	Open in IMG/M
3300030520\|Ga0311372_12822202	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300030617\|Ga0311356_11538734	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300030923\|Ga0138296_1108323	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300031231\|Ga0170824_114294414	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	986	Open in IMG/M
3300031236\|Ga0302324_100156820	All Organisms → cellular organisms → Bacteria	3719	Open in IMG/M
3300031249\|Ga0265339_10418403	Not Available	625	Open in IMG/M
3300031446\|Ga0170820_15069379	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	765	Open in IMG/M
3300031525\|Ga0302326_11716385	Not Available	827	Open in IMG/M
3300031718\|Ga0307474_10444489	Not Available	1013	Open in IMG/M
3300031753\|Ga0307477_11107563	Not Available	516	Open in IMG/M
3300031754\|Ga0307475_10090817	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2368	Open in IMG/M
3300031962\|Ga0307479_10066325	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3482	Open in IMG/M
3300032160\|Ga0311301_11087424	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1043	Open in IMG/M
3300032783\|Ga0335079_11445436	Not Available	681	Open in IMG/M
3300032805\|Ga0335078_11677672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300032828\|Ga0335080_10618224	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1137	Open in IMG/M
3300032829\|Ga0335070_10022399	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7278	Open in IMG/M
3300032892\|Ga0335081_11147668	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	891	Open in IMG/M
3300033134\|Ga0335073_10404994	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1593	Open in IMG/M
3300033158\|Ga0335077_10611358	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.39%
Host-Associated	Host-Associated	2.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.05%
Aquatic	Environmental → Aquatic	16.34%
Plants	Host-Associated → Plants	2.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.86%
Freshwater	Environmental → Aquatic → Freshwater	11.76%
Peat	Environmental → Terrestrial → Peat	7.19%
Sediment	Environmental → Aquatic → Sediment	4.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.33%
Loam	Environmental → Terrestrial → Soil → Loam	13.07%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.76%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.46%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.19%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.45%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.57%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.46%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.19%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.58%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.61%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.96%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.65%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	11.11%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.54%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.88%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.23%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.58%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.58%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.58%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.58%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.27%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.61%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.61%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.65%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.65%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.65%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.65%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001170	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022732	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU1	Host-Associated	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300025404	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10 (SPAdes)	Environmental	Open in IMG/M
3300025527	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027045	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 40 (SPAdes)	Environmental	Open in IMG/M
3300027073	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF010 (SPAdes)	Environmental	Open in IMG/M
3300027117	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030923	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12704J13340_10115431	3300001170	Forest Soil	VGFIADTIVGPVAIFGSVSPTGQTRVNFEIGRLF*
JGI12627J18819_104077402	3300001867	Forest Soil	DPGPVVIRGSFNLGVIADTIVGPIALAGSISPTGQSRVNFSIGRLF*
Ga0062386_1004061751	3300004152	Bog Forest Soil	TAELNPGPVVVRGTFNLGFIADTIVGPVGLAGSVSPTGQSRVNFSIGRVF*
Ga0066395_103450722	3300004633	Tropical Forest Soil	GTAFGTQTSNPGPVVIRGTFNLGLIADTIVGPIALAGSVSPTGQSRVNFSIGRLF*
Ga0070713_1002729123	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	FGTAPGDPGPVVIRGSFNIGIIADTIVGPIAIAPSISPTGQSRVNFSIGRLF*
Ga0070713_1013578962	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	TAFGVLGNDPGPVVVRGTFDLGVIADTIVGPIAIAGSVSPTGQSRVNFSIGRLF*
Ga0070734_101860202	3300005533	Surface Soil	GPVVIRGTFNLGIIADTIVGPLAVAGSISPTGQSRVNFSMGRLF*
Ga0070730_106644132	3300005537	Surface Soil	FGVLGNDPGPVVVRGTFNLGVIADTIVGPIAIAGSVSPTGQSRVNFSIGRLF*
Ga0070731_102201781	3300005538	Surface Soil	LGNDPGPVVVRGTFNLGVIADTIVGPIAIAGSVSPTGQSRVNFSIGRLF*
Ga0070733_102089351	3300005541	Surface Soil	FGTRANDFGPVVVRGTFNLGVIADTFVGPIAVAGSVSPTGQSRVNFSIGRLF*
Ga0070732_105056622	3300005542	Surface Soil	GTFNLGLIADTIVGPIALAGSVSPTGQSRVNFSIGRLF*
Ga0066706_101180702	3300005598	Soil	TAFNTPESVVVRGTMNLGVIAETIVGPIALAGSVSPTGQSRVNFSIGRLF*
Ga0066903_1063630052	3300005764	Tropical Forest Soil	VVRGSFNLGVIADTFVGPITLAASASPTGQTRVNFSIGRLF*
Ga0070766_102804881	3300005921	Soil	SAFNDPSTVVVRGTFNLGVIAETIVGPIALATSVSPTGESRVNLSIGRLF*
Ga0075029_1000412631	3300006052	Watersheds	LGVIADTIVGPIALAGSVSPTGQSRVNFSIGRIF*
Ga0075017_1000331763	3300006059	Watersheds	VVVRGTFNLGLIADTIVGPIALAGSVSPTGQSRANFSIGRIF*
Ga0075019_100610233	3300006086	Watersheds	GTQLNSRGPVVVRGTFNLGVIADTIVGPIALAGSVSPTGQSRVNFSIGRLF*
Ga0075019_110738051	3300006086	Watersheds	RGTFNLGVIADTIVGPITLAGSISPTGQSRVNCSIGRLF*
Ga0075015_1003212122	3300006102	Watersheds	GPVVVRGTFNLGVIADTIVGPIALAGSVSPTGQSRVNFSIGRIF*
Ga0075015_1003740921	3300006102	Watersheds	FNLGVIADTIVGPITLAGSVSPTGQSRVNFSTGRLF*
Ga0070715_109189831	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	GGPTDQAGPVVVRGSFNLGVIADTIVGPIALAGSVSPTGQSRVNFSIGRLF*
Ga0075014_1000650722	3300006174	Watersheds	TNDPGPVIVRGTFNLGVIADTIVGPIALAGSVSPTGQSRANFSIGRLF*
Ga0070765_1020413212	3300006176	Soil	AGSAFNDPSTIVVRGTINLGFIADTIVGPIALAGSVSPTGQSRVNFSIGRLFW*
Ga0099827_100118454	3300009090	Vadose Zone Soil	GTAFGTATLDPGPIAVRGTFNLGVIMDTIVGPIALAGSVSPTGQSRVNFSMGRLF*
Ga0116214_13247292	3300009520	Peatlands Soil	TFNLGVIADTIVGPIALAGSVSPTGQSRVNFSVGRLF*
Ga0116222_14188872	3300009521	Peatlands Soil	FGTAADDPGPFVVRGAFNLGVIADTFVGPITLAASASPTGQTRVNFSIGRLF*
Ga0116218_13987151	3300009522	Peatlands Soil	RTALADPGPGSGPRTFNPGVIPDPIGGPIALAGSVSPTGLSRVNFSIGRLF*
Ga0116218_15495402	3300009522	Peatlands Soil	AGTAFGTAALDPGPIAVRGTFNLGVIADTIIGPVGLAGSVSPTGQSRVNFSIGRVF*
Ga0116111_11345322	3300009616	Peatland	VVRGTFNLGLIADTIVGPIALAGSVSPTGLSRVNFSVGRLF*
Ga0116113_10065571	3300009638	Peatland	VRGTFNLGVIAETIVGPIALATSVSPTGESRVNFSIGRLF*
Ga0116216_100719181	3300009698	Peatlands Soil	GTAFGTTTEDPGPVVVRGTFNLGVIADTIVGPIAVAGSVSPTGQSRVNFSIGRIF*
Ga0116216_109511612	3300009698	Peatlands Soil	GTAADDPGPFVVRGAFNLGVIADTFVGPITLAASASPTGQTRVNFSIGRLF*
Ga0116219_108329441	3300009824	Peatlands Soil	TALLDPGPVAVRGTFNLGVIADTIVGPIALAGSVSPTGQSRVNFSVGRLF*
Ga0116223_100321683	3300009839	Peatlands Soil	AFGTALLDPGPVAVRGTFNLGVIADTIVGPIALAGSVSPTGQSRVNFSVGRLF*
Ga0116223_102711481	3300009839	Peatlands Soil	TFNLGVIADTIVGPIALAGSVSPTGLSRVNFSIGRLF*
Ga0116223_102886451	3300009839	Peatlands Soil	WYDAGSAFLESGPVVVRGSLNGGVMANTIVGPIAVFGSISPTGQSRVNFSIGRLF*
Ga0126373_118026043	3300010048	Tropical Forest Soil	AFGTSTGNPGPVVVRGTFNLGIISDTIVGPIAIAGSVSPTGQSRVNFSIGRLF*
Ga0126373_131221911	3300010048	Tropical Forest Soil	FGTAANDAGPVVVHGTFNLGVIADTIVGPIALAGSVSPTGQSRMNFTIGKLF*
Ga0074044_101556521	3300010343	Bog Forest Soil	PSTVVVRGTFNLGVIAETIVGPIALAGSVSPTGQSRVNFSIGRLF*
Ga0126370_100015301	3300010358	Tropical Forest Soil	SNPGPVVVRGTFNLGVISDTILGPIAIAGSLSPTGQSRVNFSIGRLF*
Ga0126379_114574731	3300010366	Tropical Forest Soil	VRGSFNLGVIADTIVGPIALAGSISPTGQSRVNFSIGRLF*
Ga0136449_1003225603	3300010379	Peatlands Soil	GSLNGGVMANTIVGPIAVFGSISPTGQSRVNFSIGRLF*
Ga0136449_1004364361	3300010379	Peatlands Soil	GTFNLGVIADTIIGPVGLAGSVSPTGQSRVNFSIGRVF*
Ga0136449_1008164793	3300010379	Peatlands Soil	NAGLFAETIVGPMALFASVSPTGQARINFSLGRLF*
Ga0136449_1016804612	3300010379	Peatlands Soil	AGTAFGSVTADPGPVVVRGTFNLGIIADTIVGPIALAASASPTGQSRVNFSVGRLF*
Ga0150983_109411511	3300011120	Forest Soil	EAGSAFNDPSVVVVRGTFNLGLIAETIVGPIAVAGSVSPTGQSRVNFSIGRLF*
Ga0137389_101566735	3300012096	Vadose Zone Soil	AFNDPGTVVVRGTFNIGVIAETIVGPIALAGSVSPTGQSRVNFSIGRLF*
Ga0137379_106559062	3300012209	Vadose Zone Soil	TAFGTATLDPGPIAVRGTFNLGVIMDTIVGPIALAGSVSPTGQSRVNFSMGRLF*
Ga0137378_117891912	3300012210	Vadose Zone Soil	LGVIADTIVGPIALAGSVSPTGQSRVNFSIGRLF*
Ga0137387_110590961	3300012349	Vadose Zone Soil	NLGVIMDTIVGPIALAGSVSPTGQSRVNFSMGRLF*
Ga0157352_10484071	3300012519	Unplanted Soil	EGSDPGPVVVRGSFNLGVIADTIVGPITLAGSVSPTGQSRVNFTIGRVF*
Ga0137398_109201582	3300012683	Vadose Zone Soil	TFNLGVIADTFVGPITLAGSVSPTGQSRVNFSIGRLF*
Ga0126375_104179271	3300012948	Tropical Forest Soil	VVVRGSFNLGFIADTIVGPITLAGSLSPTGQSRVNFTIGRVF*
Ga0164303_110409961	3300012957	Soil	VVVRGSFNLGVIADTIVGPIALAGSVSPTGQSRVNFSIGRLF*
Ga0126369_102617551	3300012971	Tropical Forest Soil	TSNPGPVVIRGTFNLGLIADTIVGPIALAGSVSPTGQSRANFSIGRLF*
Ga0126369_108968322	3300012971	Tropical Forest Soil	IFNLGVIADTIVGPIAIAGSVSPTGQSRVNFSIGRVL*
Ga0181536_101948442	3300014638	Bog	RGTFNLGVIAETIAGPIALAGSVSPTGQSRVNFTVGRIF*
Ga0181525_101589681	3300014654	Bog	EAGTAFNDPDSVVVRGTFNLGVIAETIAGPLALAGSISPTGQSRINFSIGRLF*
Ga0187818_100754551	3300017823	Freshwater Sediment	FNLGIIAETIAGPIALATSVSPNGQSRVNFSVGRLF
Ga0187801_100770232	3300017933	Freshwater Sediment	VVRGTFNLGIITDTIVGPIAIAGSVSPTGQSRVNFSMGRLF
Ga0187801_104091141	3300017933	Freshwater Sediment	DPGPVVVRGTFNLGVIADTMVGPITIAGSVSPTGQSRVNFSIGRIF
Ga0187783_100597411	3300017970	Tropical Peatland	GTSTSNPGPVVVRGTFNLGIISDTIVGPIAIAGSVSPTGQSRVNFSIGRLF
Ga0187781_106169491	3300017972	Tropical Peatland	AFGTAAREYGPVAVRGTFNLGVIAETFVGPIALAGSVSPTGESRVNLSLGRLF
Ga0187782_104601203	3300017975	Tropical Peatland	AFDNPNSIVVRGTINLGVIAETIVGPIALATSVSPTGESRVNFSIGRLF
Ga0187782_108255791	3300017975	Tropical Peatland	ADQNGPLVVRGTFNLGLIADTIVGPITLAGSVSPTGQSRINFSIGRVF
Ga0187782_115558461	3300017975	Tropical Peatland	PVVVRGTFNLGVIADTIVGPIGVAGSVSPTGESRVNFSVGRLF
Ga0187865_11534573	3300018004	Peatland	GWYEAGSAFNSPDSLIVRGSANAGFIADTIVGPIAIFGSVSPTGQSRVNFSIGRLF
Ga0187804_105815002	3300018006	Freshwater Sediment	GTFNLGIISDTIVGPIAIAGSVSPTGQSRVNFSMGRLF
Ga0187884_100060848	3300018009	Peatland	ANAGFIADTIVGPIAIFGSVSPTGQSRVNFSVGRLF
Ga0187873_10679151	3300018013	Peatland	NPDSLIVRGSANAGFIADTIVGPIAIFGSVSPTGQSRVNFSVGRLF
Ga0187871_106052881	3300018042	Peatland	VVVRGTFNLGVIAETIAGPLALAGSISPTGQSRINFSIGRLF
Ga0187871_106953052	3300018042	Peatland	NLGVITDTIVGPIAVAGSVSPTGQSRINFSIGRLF
Ga0187784_101501171	3300018062	Tropical Peatland	SNSSGPAVVRGTFNLGVIAETFAGPIVLAGSVSPTGESRVNLSVGRIF
Ga0187772_105405502	3300018085	Tropical Peatland	GSAFGTALHDPGPVAVRGTFNLGLIADTFVGPIGLAGSVSPTGQSRVNFTLGRLF
Ga0187769_113514562	3300018086	Tropical Peatland	GPVVVRGTFNLGVIVDTIVGPITLAGSVSPTGQSRANFSIGRVF
Ga0179592_104717642	3300020199	Vadose Zone Soil	SVVVRGTFNLGIIADTFVGPIALATSVSPTGQSRVNFSIGRLF
Ga0210407_101894035	3300020579	Soil	AFMNSDSLVVRGSANAGVIADTILGPVAIFGSISPTGQSRVNFSVGRLF
Ga0210407_107127492	3300020579	Soil	TVVVRGTFNLGFIADTIVGPIALAGSVSPTGQSRVNFSIGRLF
Ga0210407_109686772	3300020579	Soil	GTAFGTAADNPGPAVVRGAFNLGVIADTIVGPIALAGSVSPTGQSRVNFSIGRLF
Ga0210399_106117101	3300020581	Soil	IDPGPIAVRGTFNIGVIADTIVGPIALAGSVSPTGLSRVNFSVGRIF
Ga0210401_100249294	3300020583	Soil	QINSRGPVVVRGTFNLGVIADTIVGPIALAGSVSPTGQSRVNFSIGRFF
Ga0210406_108364542	3300021168	Soil	IAVRGTFNLGLIADTIVGPIGLAGSVSPTGQSRVNFSIGRLF
Ga0210400_115454622	3300021170	Soil	GTAALDPGPIAVRGTFNLGIIADTIVGPIGLAGSVSPTGQSRVNFSVGRVF
Ga0210408_108743321	3300021178	Soil	PGPVVVRGTFNLGVIADTIVGPIAVAGSVSPTGQSRVNFSIGRIF
Ga0210393_112123982	3300021401	Soil	FNLGVIAETIVGPIALATSVSPTGESRVNLSIGRLF
Ga0210393_114097591	3300021401	Soil	AGTAFNDPDSVVVRGTFNLGVIAETIAGPLALAGSISPTGQSRINFSIGRLF
Ga0210389_104824912	3300021404	Soil	GTAFNDPGPVVVHGSVNLGVIAETIVGPITIAGSVGHNGQSRVNFSIGKLF
Ga0210387_117086072	3300021405	Soil	YEAGSAFNDPGSVAVRGTFNIGVIAETIVGPIALAGSVSPTGASRVNFSIGRLF
Ga0210386_105461111	3300021406	Soil	GTAFGKAGDDPGPVVVRGTLNIGLIADTIVGPIAVAGSVSPTGQSRINFTIGRLF
Ga0210383_105164313	3300021407	Soil	GSAFNDPGTVVVRGTFNLGVIAETIVGPIALATSVSPTGESRVNLSIGRLF
Ga0210383_105750841	3300021407	Soil	AFGTVAGDAGPVVIRGSFNLGIISDTILGPIAVAGSVSPTGQSRINFSIGRLF
Ga0210383_113136001	3300021407	Soil	AGSAFMNSDSLVVRGSANAGVIADTILGPVAIFGSISPTGQSRVNFSVGRLF
Ga0210394_107801031	3300021420	Soil	SDPGPIAVRGTFNIGVIADTIVGPIALAGSVSPTGLSRVNFSVGRIF
Ga0210394_109203402	3300021420	Soil	VVVRGTFNLGVIAETIAGPLALAGSISPTGQSRVNFSIGRLF
Ga0210390_103814151	3300021474	Soil	RGTFNLGVIADTIVGPIAVAGSVSPTGQSRVNFSIGRIF
Ga0210390_104429811	3300021474	Soil	YEAGSAFNDPGTVVVRGTFNLGFIADTIVGPIALAGSVSPTGQSRVNFSIGRLF
Ga0210392_109670261	3300021475	Soil	LVVRGSANAGVIADTILGPVAIFGSISPTGQSRVNSSVGRLF
Ga0210398_106759041	3300021477	Soil	RGSFNLGVIAETIAGPLALAGSVSPTGQSRVNFSIGRLF
Ga0210398_116210651	3300021477	Soil	PIAVRGTFNLGIIADTIVGPIGLAGSVSPTGQSRVNFSIGRVF
Ga0210402_113695621	3300021478	Soil	PGSVAVRGTFNIGVIAETIVGPIALAGSVSPTGVSRVNFSIGRLF
Ga0210409_105596573	3300021559	Soil	AGSAVMNSDSLVVRGSANAGVIADTILGPVAIFGSISPTGQSRVNFSVGRLF
Ga0210409_106486001	3300021559	Soil	DPGPVAVHGTFNLGIISDTIVGPIALAGSVSPTGQSRVNFSIGRLF
Ga0224569_1076861	3300022732	Rhizosphere	FNDPDSVVVRGTFNLGVIAETIAGPLALAGSISPTGQSRINFSIGRLF
Ga0228598_10178713	3300024227	Rhizosphere	VVRGTFNLGVIAETIVGPIALATSVSPTGESRVNFSIGRLF
Ga0228598_10838052	3300024227	Rhizosphere	AGSAFNDPSTIVVRGTFNLGVIAETIVGPIALATSVSPTGESRVNFSIGRLF
Ga0208936_10582161	3300025404	Peatland	GTAFGTAELNPGPVVVRGTFNLGFIADTIVGPVGLAGSISPTGQSRVNFSIGRVF
Ga0208714_10874281	3300025527	Arctic Peat Soil	TATDDPGPVVVRGTFNLGVIADTIVGPIALAGSVSPTGQSRVNFSIGRVF
Ga0208691_10194805	3300025612	Peatland	ANLGFIADTIVGPFAIFGSVSPTGQTRVNFEIGRLF
Ga0207665_104192181	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	IRGTFNLGIIADTVIGPITLAGSVSPTGQSRVNFSIGRLF
Ga0207726_10193221	3300027045	Tropical Forest Soil	FNLGVIADTFVGPIALAGSMSPTGQSRVNFSLGRLF
Ga0208366_10147971	3300027073	Forest Soil	SRGPVVVRGTFNLGVIADTIVGPIALAGSVSPTGQSRVNFSIGRFF
Ga0209732_10712012	3300027117	Forest Soil	GWYEAGTAFNDPGPVVVHGSVNLGVIAETIVGPITIAGSVGHNGQSRVNFSIGKLF
Ga0209008_10401773	3300027545	Forest Soil	GTFNLGVIAETIVGPIALATSVSPTGQSRVNLSIGRLF
Ga0209528_10178981	3300027610	Forest Soil	PVVVRGTFNLGIIADTIVGPIALAGSVSPTGQSRVNFSIGRLF
Ga0209736_11824641	3300027660	Forest Soil	PGPIAIRGTFNLGVIADTFVGPIALAGSVSPTGLSRVNFSVGRLF
Ga0209040_103956012	3300027824	Bog Forest Soil	RSTVVVRGTFNLGVIAETIVGPIAVAGSVSPTGQSRVNFSIGRLF
Ga0209040_105144062	3300027824	Bog Forest Soil	NSPGSVVVRGSFNLGVISETIVGPIAIAGSVSPTGQSRVNFSIGRLF
Ga0209580_100348211	3300027842	Surface Soil	TATDDPGPVAVRGTFNLGFIADTIVGPVALAGSVSPTGQSRVNFSIGRLF
Ga0209580_103103111	3300027842	Surface Soil	GPVVVRGTFNLGVIADTIVGPIALAGSVSPTGQSRVNFSIGRLF
Ga0209580_104622781	3300027842	Surface Soil	PIVVRGTFNLGLIADTIVGPIALAGSVSPTGQSRVNFSIGRLF
Ga0209517_100165437	3300027854	Peatlands Soil	RGTFNLGVIADTIIGPVGLAGSVSPTGQSRVNFSIGRVF
Ga0209693_101738181	3300027855	Soil	KAGDDPGPVVVRGTLNIGLIADTIVGPIAVAGSVSPTGQSRINFTIGRLF
Ga0209579_101435601	3300027869	Surface Soil	VLGNDPGPVVVRGTFNLGVIADTIVGPIAIAGSVSPTGQSRVNFSIGRLF
Ga0209380_108550592	3300027889	Soil	FNDPSTVVVRGTFNLGVIAETIVGPIALATSVSPTGESRVNLSIGRLF
Ga0209415_109641722	3300027905	Peatlands Soil	GTAIIDPGPVAVRGTFNLGVIADTIVGPIALAGSVSPTGLSRVNFSIGRLF
Ga0209526_106985632	3300028047	Forest Soil	VVARGTFNLGVIADTIVGPIALAGSISPTGQSRVNFSIGRLF
Ga0302224_104450081	3300028759	Palsa	NDPGTVVVRGTFNLGVIAETIVGPIALATSVSPTGESRVNFSIGRLF
Ga0311346_100945961	3300029952	Bog	VRGTFNLGVIAETIVGPIALATSVSPTGQSRVNFSIGRLF
Ga0302178_104893212	3300030013	Palsa	DNPNSVVIRGTFNLGVIADTIVGPVALAASVSPTGQSRVNFSVGRLF
Ga0302306_103111961	3300030043	Palsa	PNSVVIRGTFNLGVIADTIVGPVALAASVSPTGQSRVNFSVGRLF
Ga0302179_102190141	3300030058	Palsa	YEAGSAFDNPNSVVIRGTFNLGVIADTIVGPVALATSVSPTGQSRVNFSVGRLF
Ga0311353_105789392	3300030399	Palsa	AGSAFGTATNDPGPVVVRGTFNIGIIADTFVGPITLAASASPTGQSRVNFSIGRLF
Ga0311372_116369181	3300030520	Palsa	AFGNSARSYGPLVVRGSFNLGVIADTIVGPITVAGSVSPTGQSRVNFSVGRLF
Ga0311372_128222021	3300030520	Palsa	FNDPGTVVVRGTFNLGVIAETIVGPIALATSVSPTGESRVNFSIGRLF
Ga0311356_115387342	3300030617	Palsa	SVVVRGTFNLGVIAETIAGPLALAGSISPTGQSRINFSIGRLF
Ga0138296_11083231	3300030923	Soil	GTAFGTVANDPGPVVIRGTFNLGVIADTIVGPIALAGSVSPTGQSRVNFSIGRLF
Ga0170824_1142944141	3300031231	Forest Soil	LDPGPIAVRGTFNLGVIMDTIVGPIALAGSVSPTGQSRVNFSLGRLF
Ga0302324_1001568204	3300031236	Palsa	DSVVVRGTFNLGVIAETIAGPLALAGSISPTGQSRINFSIGRLF
Ga0265339_104184032	3300031249	Rhizosphere	DDPGPVVVRGTFNLGVIADTIVGPIALAGSVSPTGQSRVNFSIGRLF
Ga0170820_150693792	3300031446	Forest Soil	PGPIAVRGTFNLGVIADTIVGPIALAGSVSPTGQSRVNFSMGRLF
Ga0302326_117163851	3300031525	Palsa	GSAFNNSDSLVVRGSANAGIIADTILGPVAIFGSVSPTGQSRVNFSVGRLF
Ga0307474_104444892	3300031718	Hardwood Forest Soil	AFGTREHDPGPIVIRGTFNLGVIADTIVGPIAIAGSVSPTGQSRVNFSIGRVF
Ga0307477_111075631	3300031753	Hardwood Forest Soil	IVIRGTFNLGVIADTIVGPIAIAGSVSPTGQSRVNFSIGRVF
Ga0307475_100908176	3300031754	Hardwood Forest Soil	TINLGFIAETIVGPIALAGSVSPTGQSRVNFSIGRLF
Ga0307479_100663256	3300031962	Hardwood Forest Soil	IRGTFNLGVIAETIVGPIALAGSVSPTGQSRVNFSIGRLF
Ga0311301_110874241	3300032160	Peatlands Soil	AGTAFGSVTADPGPVVVRGTFNLGIIADTIVGPIALAASASPTGQSRVNFSVGRLF
Ga0335079_114454361	3300032783	Soil	DAGTAFFNSGPVVVRGTFNGGLIAETIVGPIAIFGSVSPTGQSRINFSIGRLF
Ga0335078_116776721	3300032805	Soil	AGTAFGTATEDPGPVVVRGSFNLGVIADTIVGPIALAGSVSPTGQSRVNFSIGRLF
Ga0335080_106182241	3300032828	Soil	GTFNLGVIAETFIGPIALAGSVSPTGQSRVNFSIGRLF
Ga0335070_100223991	3300032829	Soil	VVRGTFNLGLIADTIVGPIALAGSVSPTGQSRVNFSIGRLF
Ga0335081_111476682	3300032892	Soil	RGTFNLGVIADTIVGPIAVAGSVSPTGQSRVNFSIGRLF
Ga0335073_104049941	3300033134	Soil	SAFGTTAGETGPFVVRGTFNLGIIADTIVGPIAIAGSVSPTGQSRVNFSIGRLF
Ga0335077_106113582	3300033158	Soil	VVVRGTFNLGVIADTFVGPIAIAGSVSPTGQSRVNFSIGRVF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045383

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences