Metagenome Family F046032

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F046032
Family Type	Metagenome
Number of Sequences	152
Average Sequence Length	69 residues
Representative Sequence	SGCDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTMKAASVNRFIIA
Number of Associated Samples	119
Number of Associated Scaffolds	152

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.64 %
% of genes near scaffold ends (potentially truncated)	95.39 %
% of genes from short scaffolds (< 2000 bps)	86.18 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.342 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (35.526 % of family members)
Environment Ontology (ENVO)	Unclassified (48.026 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.921 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.46% β-sheet: 15.38% Coil/Unstructured: 66.15%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 152 Family Scaffolds
PF12849	PBP_like_2	16.45
PF02321	OEP	1.97
PF00999	Na_H_Exchanger	1.32
PF00873	ACR_tran	0.66
PF07876	Dabb	0.66
PF02371	Transposase_20	0.66
PF01384	PHO4	0.66
PF03840	SecG	0.66
PF07396	Porin_O_P	0.66
PF12680	SnoaL_2	0.66
PF12681	Glyoxalase_2	0.66
PF16576	HlyD_D23	0.66

COG ID	Name	Functional Category	% Frequency in 152 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	3.95
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	1.32
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	1.32
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	1.32
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	1.32
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	1.32
COG0306	Phosphate/sulfate permease	Inorganic ion transport and metabolism [P]	0.66
COG1314	Protein translocase subunit SecG	Intracellular trafficking, secretion, and vesicular transport [U]	0.66
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.66
COG3746	Phosphate-selective porin	Inorganic ion transport and metabolism [P]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.34 %
Unclassified	root	N/A	0.66 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.34 %
Unclassified	root	N/A	0.66 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.34 %
Unclassified	root	N/A	0.66 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	92.11 %
Unclassified	root	N/A	0.66 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	92.11 %
Unclassified	root	N/A	0.66 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	88.16 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	1.32 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1.32 %
Unclassified	root	N/A	0.66 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	88.16 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	1.32 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	1.32 %
Unclassified	root	N/A	0.66 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	88.16 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	1.32 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.66 %
Unclassified	root	N/A	0.66 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	88.16 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	1.32 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	0.66 %
Unclassified	root	N/A	0.66 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	88.16 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	1.32 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	0.66 %
Unclassified	root	N/A	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001139\|JGI10220J13317_10011993	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M
3300005174\|Ga0066680_10355598	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	933	Open in IMG/M
3300005175\|Ga0066673_10096911	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1577	Open in IMG/M
3300005175\|Ga0066673_10725074	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	571	Open in IMG/M
3300005177\|Ga0066690_10976575	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	534	Open in IMG/M
3300005179\|Ga0066684_10666551	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	698	Open in IMG/M
3300005180\|Ga0066685_10671171	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	712	Open in IMG/M
3300005180\|Ga0066685_10828468	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	624	Open in IMG/M
3300005184\|Ga0066671_11067887	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	505	Open in IMG/M
3300005187\|Ga0066675_11272410	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M
3300005187\|Ga0066675_11435759	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	505	Open in IMG/M
3300005289\|Ga0065704_10526581	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	639	Open in IMG/M
3300005293\|Ga0065715_10313944	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1014	Open in IMG/M
3300005437\|Ga0070710_10804973	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	671	Open in IMG/M
3300005439\|Ga0070711_100851958	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	775	Open in IMG/M
3300005447\|Ga0066689_10504251	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	763	Open in IMG/M
3300005447\|Ga0066689_10855583	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	563	Open in IMG/M
3300005451\|Ga0066681_10833313	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	555	Open in IMG/M
3300005454\|Ga0066687_10745650	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	582	Open in IMG/M
3300005540\|Ga0066697_10144980	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1400	Open in IMG/M
3300005540\|Ga0066697_10186507	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1232	Open in IMG/M
3300005555\|Ga0066692_10518191	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	757	Open in IMG/M
3300005555\|Ga0066692_10914426	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	537	Open in IMG/M
3300005556\|Ga0066707_10463330	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	822	Open in IMG/M
3300005560\|Ga0066670_10193283	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1217	Open in IMG/M
3300005560\|Ga0066670_10989797	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	513	Open in IMG/M
3300005566\|Ga0066693_10415971	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	547	Open in IMG/M
3300005569\|Ga0066705_10451624	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	805	Open in IMG/M
3300005575\|Ga0066702_10541518	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	704	Open in IMG/M
3300005587\|Ga0066654_10678949	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	575	Open in IMG/M
3300005598\|Ga0066706_10812204	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	736	Open in IMG/M
3300006032\|Ga0066696_10009072	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	4738	Open in IMG/M
3300006032\|Ga0066696_10577040	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	732	Open in IMG/M
3300006046\|Ga0066652_100316989	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1391	Open in IMG/M
3300006163\|Ga0070715_10829292	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	564	Open in IMG/M
3300006173\|Ga0070716_101212082	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	607	Open in IMG/M
3300006175\|Ga0070712_100308833	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1282	Open in IMG/M
3300006791\|Ga0066653_10110799	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1270	Open in IMG/M
3300006797\|Ga0066659_10253058	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1320	Open in IMG/M
3300006852\|Ga0075433_11388432	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	608	Open in IMG/M
3300006904\|Ga0075424_100445459	All Organisms → cellular organisms → Bacteria	1382	Open in IMG/M
3300009012\|Ga0066710_102707898	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	707	Open in IMG/M
3300009012\|Ga0066710_103819639	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	565	Open in IMG/M
3300009012\|Ga0066710_104476092	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	522	Open in IMG/M
3300009137\|Ga0066709_100128795	All Organisms → cellular organisms → Bacteria	3182	Open in IMG/M
3300009137\|Ga0066709_102268800	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	746	Open in IMG/M
3300009137\|Ga0066709_102435476	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	709	Open in IMG/M
3300009176\|Ga0105242_11427223	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	720	Open in IMG/M
3300009553\|Ga0105249_11706316	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	702	Open in IMG/M
3300010321\|Ga0134067_10214813	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	712	Open in IMG/M
3300010321\|Ga0134067_10370086	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	568	Open in IMG/M
3300010323\|Ga0134086_10436004	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300010325\|Ga0134064_10409977	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M
3300010326\|Ga0134065_10152237	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	808	Open in IMG/M
3300010335\|Ga0134063_10691163	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	526	Open in IMG/M
3300010397\|Ga0134124_11020951	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	840	Open in IMG/M
3300012200\|Ga0137382_10273298	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1175	Open in IMG/M
3300012203\|Ga0137399_11390168	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	588	Open in IMG/M
3300012205\|Ga0137362_10412395	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1170	Open in IMG/M
3300012205\|Ga0137362_10562027	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	985	Open in IMG/M
3300012208\|Ga0137376_10228410	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1613	Open in IMG/M
3300012208\|Ga0137376_11329943	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	609	Open in IMG/M
3300012210\|Ga0137378_10598268	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1013	Open in IMG/M
3300012210\|Ga0137378_10766308	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	877	Open in IMG/M
3300012285\|Ga0137370_10703381	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	628	Open in IMG/M
3300012350\|Ga0137372_10542385	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	860	Open in IMG/M
3300012351\|Ga0137386_10953393	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	612	Open in IMG/M
3300012353\|Ga0137367_11187156	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300012357\|Ga0137384_10787932	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	769	Open in IMG/M
3300012361\|Ga0137360_10095549	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2261	Open in IMG/M
3300012362\|Ga0137361_10466167	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1160	Open in IMG/M
3300012917\|Ga0137395_11012342	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	594	Open in IMG/M
3300012925\|Ga0137419_10282625	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1262	Open in IMG/M
3300012929\|Ga0137404_11162292	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	709	Open in IMG/M
3300012958\|Ga0164299_11632475	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	509	Open in IMG/M
3300012975\|Ga0134110_10604579	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300012976\|Ga0134076_10321368	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	675	Open in IMG/M
3300012977\|Ga0134087_10151631	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1009	Open in IMG/M
3300012977\|Ga0134087_10709058	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	534	Open in IMG/M
3300013102\|Ga0157371_10107750	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1977	Open in IMG/M
3300013105\|Ga0157369_11608291	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	661	Open in IMG/M
3300013297\|Ga0157378_12480910	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	570	Open in IMG/M
3300013306\|Ga0163162_13374386	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300013307\|Ga0157372_13382598	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508	Open in IMG/M
3300014157\|Ga0134078_10091578	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1124	Open in IMG/M
3300014326\|Ga0157380_11214550	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	798	Open in IMG/M
3300014745\|Ga0157377_10368708	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	969	Open in IMG/M
3300015356\|Ga0134073_10093496	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	878	Open in IMG/M
3300015357\|Ga0134072_10036325	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1312	Open in IMG/M
3300018028\|Ga0184608_10497218	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	522	Open in IMG/M
3300018071\|Ga0184618_10191491	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	852	Open in IMG/M
3300018433\|Ga0066667_10659898	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	875	Open in IMG/M
3300019362\|Ga0173479_10164090	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	902	Open in IMG/M
3300019877\|Ga0193722_1049698	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1063	Open in IMG/M
3300019878\|Ga0193715_1001566	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	5169	Open in IMG/M
3300019878\|Ga0193715_1003482	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3415	Open in IMG/M
3300019881\|Ga0193707_1049028	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1348	Open in IMG/M
3300019885\|Ga0193747_1033920	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1269	Open in IMG/M
3300019886\|Ga0193727_1072777	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1058	Open in IMG/M
3300019999\|Ga0193718_1060915	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	813	Open in IMG/M
3300020002\|Ga0193730_1043918	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1294	Open in IMG/M
3300020002\|Ga0193730_1062018	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1071	Open in IMG/M
3300020010\|Ga0193749_1068178	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	667	Open in IMG/M
3300020015\|Ga0193734_1006255	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2198	Open in IMG/M
3300020018\|Ga0193721_1007757	All Organisms → cellular organisms → Bacteria	2811	Open in IMG/M
3300020018\|Ga0193721_1100953	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	739	Open in IMG/M
3300020170\|Ga0179594_10128621	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	927	Open in IMG/M
3300021411\|Ga0193709_1057570	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	896	Open in IMG/M
3300021413\|Ga0193750_1043343	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	972	Open in IMG/M
3300022756\|Ga0222622_10515335	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	856	Open in IMG/M
3300022756\|Ga0222622_11477727	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	500	Open in IMG/M
3300023058\|Ga0193714_1027699	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	834	Open in IMG/M
3300025928\|Ga0207700_10251684	All Organisms → cellular organisms → Bacteria	1509	Open in IMG/M
3300025928\|Ga0207700_11921932	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
3300025937\|Ga0207669_10566945	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	918	Open in IMG/M
3300025940\|Ga0207691_10125662	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2270	Open in IMG/M
3300025972\|Ga0207668_10639981	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	930	Open in IMG/M
3300026121\|Ga0207683_10621303	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1001	Open in IMG/M
3300026305\|Ga0209688_1080816	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	588	Open in IMG/M
3300026306\|Ga0209468_1148110	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	619	Open in IMG/M
3300026312\|Ga0209153_1029447	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1865	Open in IMG/M
3300026314\|Ga0209268_1135601	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	608	Open in IMG/M
3300026315\|Ga0209686_1014244	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	3263	Open in IMG/M
3300026316\|Ga0209155_1009147	All Organisms → cellular organisms → Bacteria	4351	Open in IMG/M
3300026316\|Ga0209155_1024796	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2479	Open in IMG/M
3300026316\|Ga0209155_1064675	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1394	Open in IMG/M
3300026317\|Ga0209154_1251924	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	611	Open in IMG/M
3300026317\|Ga0209154_1294379	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	536	Open in IMG/M
3300026323\|Ga0209472_1193915	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	705	Open in IMG/M
3300026324\|Ga0209470_1001395	All Organisms → cellular organisms → Bacteria	17953	Open in IMG/M
3300026326\|Ga0209801_1086364	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1370	Open in IMG/M
3300026330\|Ga0209473_1318271	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	519	Open in IMG/M
3300026523\|Ga0209808_1146970	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	916	Open in IMG/M
3300026530\|Ga0209807_1018613	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3396	Open in IMG/M
3300026530\|Ga0209807_1026151	All Organisms → cellular organisms → Bacteria	2824	Open in IMG/M
3300026530\|Ga0209807_1054654	All Organisms → cellular organisms → Bacteria	1829	Open in IMG/M
3300026542\|Ga0209805_1029087	All Organisms → cellular organisms → Bacteria	2842	Open in IMG/M
3300026542\|Ga0209805_1231479	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	757	Open in IMG/M
3300026547\|Ga0209156_10032365	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	2956	Open in IMG/M
3300026547\|Ga0209156_10040291	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2557	Open in IMG/M
3300026547\|Ga0209156_10206146	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	935	Open in IMG/M
3300026550\|Ga0209474_10003862	All Organisms → cellular organisms → Bacteria	13045	Open in IMG/M
3300026550\|Ga0209474_10006607	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	9723	Open in IMG/M
3300026550\|Ga0209474_10018432	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	5440	Open in IMG/M
3300026552\|Ga0209577_10660224	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	601	Open in IMG/M
3300026557\|Ga0179587_11035948	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	540	Open in IMG/M
3300028884\|Ga0307308_10342813	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	716	Open in IMG/M
3300028885\|Ga0307304_10347804	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	662	Open in IMG/M
3300031820\|Ga0307473_11389369	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	529	Open in IMG/M
3300031858\|Ga0310892_11381155	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	506	Open in IMG/M
3300032180\|Ga0307471_102924602	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.82%
Host-Associated	Host-Associated	11.18%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.18%
Plants	Host-Associated → Plants	11.18%
Aquatic	Environmental → Aquatic	2.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.18%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.55%
Sediment	Environmental → Aquatic → Sediment	2.63%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.63%
Loam	Environmental → Terrestrial → Soil → Loam	8.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.58%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.63%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.32%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.66%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.66%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	40.13%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.58%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.61%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.32%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	35.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.16%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.16%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.61%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.97%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.32%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.32%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.32%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.32%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.32%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.32%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023058	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10220J13317_100119931	3300001139	Soil	AGRTGSKQLITPGVITATSSEAVLSSLTSGGNDGRALFFSASAQQALFGQLPCLQAWPIGGLDTGQADAGNRTALTKSAVTMRMASVNRFITA*
Ga0066680_103555981	3300005174	Soil	GRALFFSASAQQALFGQLPCLQVWPIGGLDAGQADAGNRTALTKSAVTMKAASVNRFNIA
Ga0066673_100969114	3300005175	Soil	RALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAITMRAASVNRFIIA*
Ga0066673_107250741	3300005175	Soil	FFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTIKVASINRFIIA*
Ga0066690_109765752	3300005177	Soil	RALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTMKAASVNRFNIV*
Ga0066684_106665511	3300005179	Soil	GCDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSVVTMKAASINRFNIA*
Ga0066685_106711712	3300005180	Soil	SASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSVVTMKAASINRFNIA*
Ga0066685_108284682	3300005180	Soil	GCDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTMMAASVNRFNIA*
Ga0066671_110678871	3300005184	Soil	QQALFEQLPCLQDWPIGGLDAGQADAGNRTALTKSAITMTAASINRFIIA*
Ga0066675_112724101	3300005187	Soil	GCDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTMKAASVNRFNIV*
Ga0066675_114357591	3300005187	Soil	PGVTTATSSEAALSSLTSGGDDGWALFFSASAQQALFEQLPCLQDWPIGGLDAGQADAGNRTALTKSAITMTAASINRFIIA*
Ga0065704_105265812	3300005289	Switchgrass Rhizosphere	AQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTMRMASVNRFITA*
Ga0065715_103139441	3300005293	Miscanthus Rhizosphere	SAAGLAERSAGRTGSKQLITPGVITATSSEAVLSSLTSGGNDGRALFFSASAQQALFGQLPCLQAWPIGGLDTGHADAGNRTALTKSAVTMRMASVNRFITA*
Ga0070710_108049732	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LVRPGVVTATSSEAALSSLTSGGDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNPTALTKSAVTMKAASVNRFNTA*
Ga0070711_1008519581	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	GDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTMRMASVNRFITA*
Ga0066689_105042512	3300005447	Soil	SASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSVVTMKAASINRFIIA*
Ga0066689_108555832	3300005447	Soil	SASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTMKAASINRFNIA*
Ga0066681_108333131	3300005451	Soil	DDGRALFFSASAQQALFGQLPCLQAWPIGGLDTGQADAGNRTALTKSAVTMKAASINRFNIA*
Ga0066687_107456502	3300005454	Soil	ATSSEAVLSSLTSGCDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTMKAASVNRFNIV*
Ga0066697_101449803	3300005540	Soil	LTSGCDDGRALFFSASAQQALFGQLPCLQAWPIGGLDTGQADAGNRTALTKSAVTMKAASINRFNIA*
Ga0066697_101865071	3300005540	Soil	AAGPAQCSADRTGSKQLVRPGVVTATSSETALSSLTSGGDDDRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTIKAASINRFNIV*
Ga0066692_105181911	3300005555	Soil	GRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTIKVASINRFIIA
Ga0066692_109144261	3300005555	Soil	GRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTMKAASVNRFNIA
Ga0066707_104633302	3300005556	Soil	VLSSLTSGCDDGRALFFSASAQQALFGQLPCLQAWPIGGLDTGQADAGNRTALTKSAVTMKAASINRFNIA*
Ga0066670_101932832	3300005560	Soil	LSSLTSGGDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTIKAASINRFNIV*
Ga0066670_109897972	3300005560	Soil	LFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSVVTMKAASINRFIIA*
Ga0066693_104159711	3300005566	Soil	SSLTSGCDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALMKSAVTMKAASVNRFNIA*
Ga0066705_104516244	3300005569	Soil	SAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALMKSAVTMKAASVNRFNIA*
Ga0066702_105415182	3300005575	Soil	LTSGCDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALMKSAVTMKAASVNRFNIA*
Ga0066654_106789492	3300005587	Soil	DDGRALFFAASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTIKAASINRFIIA*
Ga0066706_108122041	3300005598	Soil	DDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSVVTMKAASINRFNIA*
Ga0066696_100090726	3300006032	Soil	DDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTIKAASINRFNIV*
Ga0066696_105770401	3300006032	Soil	LFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALMKSAVTMKAASVNRFNIA*
Ga0066652_1003169891	3300006046	Soil	FSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKRVVTMKAASINRFIIA*
Ga0070715_108292921	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	FSASAQQALFGQLPCLQAWPIGGLDAGQADAGNPTALTKSAVTMKAASVNRFNTA*
Ga0070716_1012120822	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	PGVVTATSSEAALSSLTSGGDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNPTALTKSAVTMKAASVNRFNTA*
Ga0070712_1003088333	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LTSGGDDGRALFFSASAQQALFGQLPCLQAWPIGGLDTGQADAGNRTALTKSAVTMKAASVNRFNTA*
Ga0066653_101107993	3300006791	Soil	RTGSKQLVSPGVITATSSEAVLSSLTSGGDDGLALFFSASAQQALFGQLPCLQAWPIGGLNAGQADAGNRTALTKSAVTIKAASINRVIIA*
Ga0066659_102530584	3300006797	Soil	DDGRALFFAASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALRKSAVTIKVASINRFIIA*
Ga0075433_113884322	3300006852	Populus Rhizosphere	SGGNDGRTLFFSASAQQALFGQLPALQDWPIGGLDAGQADAGNRTALAKSAATMKAASINRFIIDYSL*
Ga0075424_1004454591	3300006904	Populus Rhizosphere	DGRALFFSASAQQALFGQLPALQDWPIGGLDAGQADAGNRTALAKSAATMKAASINRFIIDYSL*
Ga0066710_1027078981	3300009012	Grasslands Soil	SGCDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSVVTMKAASINRFNIA
Ga0066710_1038196391	3300009012	Grasslands Soil	SGCDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTMMAASVNRFNIA
Ga0066710_1044760921	3300009012	Grasslands Soil	ALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTIKAASINRFNIV
Ga0066709_1001287951	3300009137	Grasslands Soil	DDGRALFFSASAQQALFGQLPCLQAWPIGGLDTGQADAGNRTALTKSTVTIKAASINRFIIA*
Ga0066709_1022688002	3300009137	Grasslands Soil	DGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKRVVTMKAASINRFIIA*
Ga0066709_1024354761	3300009137	Grasslands Soil	DGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTIKVASINRFIIA*
Ga0105242_114272232	3300009176	Miscanthus Rhizosphere	GVITATSSEAVLSSLTSGGNDGRALFFSASAQQALFGQLPCLQAWPIGGLDTGQADAGNRTALTKSAVTTKAASVNRFNTA*
Ga0105249_117063161	3300009553	Switchgrass Rhizosphere	SGGDDGRALFFSASAQQALFGQLPCLQAWPIGGLDTGQADAGNRTALTKSAVTMRMASVNRFITA*
Ga0134067_102148132	3300010321	Grasslands Soil	MSSEAVLSSLTSGGDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSVVTMKAASINRFIIA*
Ga0134067_103700861	3300010321	Grasslands Soil	SPGVITATSSEAVLSPLTSGCDDGRALFFSASAQQALFGQLPCLQAWPIGGLDTGQADAGNRTALTKSAVTMKAASINRFNIA*
Ga0134086_104360041	3300010323	Grasslands Soil	RALFFSASAQQALLGQLPCLQAWPIVGLDTGQADAGNRTALTKSAVTMKAASINRFNIA*
Ga0134064_104099771	3300010325	Grasslands Soil	LFFSASAQQALFGQLPCLQAWPIGGLDTGQADAGNRTALTKSAVTMKAASINRFNIA*
Ga0134065_101522372	3300010326	Grasslands Soil	DDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSVVTMKAASINRFIIA*
Ga0134063_106911631	3300010335	Grasslands Soil	QLVRLGVTIATSSEAALSSLTSGCDDGQALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTMMAASVNRFNIA*
Ga0134124_110209511	3300010397	Terrestrial Soil	LTSGGDDGRALFFSASAQQALFGQLPCLQAWPIGGLDTGQADAGNRTALTKSAVTMRMASVNRFITA*
Ga0137382_102732981	3300012200	Vadose Zone Soil	SGGDDGRALFFAASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTIKVASINRFIIA*
Ga0137399_113901681	3300012203	Vadose Zone Soil	SAECSAGRTGSKQHIRPDVITATNSEAVLSSLTSGCDDGRALFFAASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTIKVASINRFIIA*
Ga0137362_104123951	3300012205	Vadose Zone Soil	GRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTMKAASVNRFIIA
Ga0137362_105620271	3300012205	Vadose Zone Soil	SGCDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTIKVASINRFIIA*
Ga0137376_102284103	3300012208	Vadose Zone Soil	SAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTMKAASVNRFNIV*
Ga0137376_113299432	3300012208	Vadose Zone Soil	FSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTMKAANINRFNIA*
Ga0137378_105982681	3300012210	Vadose Zone Soil	SAAGSAECSAGRTGSKQLVRPGVITATSSEAVLSSLTSGCDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSVVTMKAASINRFIIA*
Ga0137378_107663081	3300012210	Vadose Zone Soil	AGRTGSKQLVRAGVITATSSEAVVSSLTSGCDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSVVTMKAASVNRFNIA*
Ga0137370_107033811	3300012285	Vadose Zone Soil	TPTSSEAVVSSLTSGCDDGRALFFSASAQQALFGQLPCLQPWPIGGLDAGQADAGNRTALTKSAVTMKAASINRFIIT*
Ga0137372_105423851	3300012350	Vadose Zone Soil	DDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTMKAASINRFTTV*
Ga0137386_109533932	3300012351	Vadose Zone Soil	ATSSEAVLSSLTSGGDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTMKAASINRFIIA*
Ga0137367_111871561	3300012353	Vadose Zone Soil	VLSSLTSGCDDGRVLFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAATMKAASINRFIIA*
Ga0137384_107879321	3300012357	Vadose Zone Soil	LVTPGVITATSNEAALSSFTSGGDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSVVTMKAASINRFIIA*
Ga0137360_100955491	3300012361	Vadose Zone Soil	SAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTIKVASINRFIIA*
Ga0137361_104661671	3300012362	Vadose Zone Soil	SGCDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTMKAASVNRFIIA*
Ga0137395_110123422	3300012917	Vadose Zone Soil	QQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTMKVASINRFIIA*
Ga0137419_102826251	3300012925	Vadose Zone Soil	QALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTIKVASINRFIIA*
Ga0137404_111622923	3300012929	Vadose Zone Soil	SAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSVVTMKAASINRFIIA*
Ga0164299_116324751	3300012958	Soil	FFSASAQQALFGQLPCLQAWPIGGLDTGQADAGNRTALTKSAVTMRMASVNRFITA*
Ga0134110_106045792	3300012975	Grasslands Soil	FFASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTIKAASINRFNIV*
Ga0134076_103213681	3300012976	Grasslands Soil	TATSSEAVLSPLTSGCDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSVVTMKAASINRFIIA*
Ga0134087_101516312	3300012977	Grasslands Soil	VLSSLTSGCDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSVVTMKAASINRFIIA*
Ga0134087_107090582	3300012977	Grasslands Soil	SAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTIKAASINRFIIA*
Ga0157371_101077504	3300013102	Corn Rhizosphere	ASAQQALFGQLPCLQAWPIGGLDTGQADAGNRTALTKSAVTMRMASVNRFITA*
Ga0157369_116082911	3300013105	Corn Rhizosphere	LFFSASAQQALFGQLPCLQAWPIGGLDTGQADAGNRTALTKSAVTMRMASVNRFITA*
Ga0157378_124809101	3300013297	Miscanthus Rhizosphere	LSSLTSGGDDGRAFFFSASAQQALFGQLPCLQAWPIGGLDTGQADAGNRTALTKSAVTTKAASVNRFNTA*
Ga0163162_133743862	3300013306	Switchgrass Rhizosphere	GDDGRALFFSASAQQALFGQLPCLQAWPIGGLDTGQADAGNRTALTKSAVTMRMASVNRFITA*
Ga0157372_133825982	3300013307	Corn Rhizosphere	SKQLVRPGVVTATSSEAALSSLTSGGDDGRALFFSASAQQALFGQLPCLQAWPIGGLDTGQADAGNRTALTKSAVTTKAASVNRFNTA*
Ga0134078_100915783	3300014157	Grasslands Soil	SASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTIKAASINRVIIA*
Ga0157380_112145501	3300014326	Switchgrass Rhizosphere	ECSAGRTGSKQLVKPGVIRATSSEAVLSPLTSGGDDGRALFFSASAQQALFGQLPCLQAWPIGGLDTGQADAGNRTALTKSAVTMRMASVNRFITA*
Ga0157377_103687083	3300014745	Miscanthus Rhizosphere	SAQQALFGQLPCLQAWPIGGLDTGQADAGNRTALTKSAVTTKAASVNRFNTA*
Ga0134073_100934962	3300015356	Grasslands Soil	SEAVLSSLTSGCDDGRALFFAASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSVVTMKAASINRFIIA*
Ga0134072_100363251	3300015357	Grasslands Soil	FFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTMMAASVNRFNIA*
Ga0184608_104972182	3300018028	Groundwater Sediment	GVITATNSEAVLSSLTSGCDDGRALFFAASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTIKVASINRFIIA
Ga0184618_101914911	3300018071	Groundwater Sediment	SAAGSAKCSAGRTGRKQLVRPGVITATSSEAVLSPLTSGGDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTIKVASINRFIIA
Ga0066667_106598981	3300018433	Grasslands Soil	PNADGPEPCSAYRTGSKQLVRPGVVTATSSETALSSLTSGGDDGRALFFFASAQQALFAQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTIKAASINRFNIV
Ga0173479_101640901	3300019362	Soil	TSSEPVLSPLTSGGDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQAEAGNRTALTKSAVTMRMASVNRFITA
Ga0193722_10496981	3300019877	Soil	LSSLTSGCDDGRALFFAASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTIKVASINRFIIA
Ga0193715_10015667	3300019878	Soil	ATSSEAVLSSLTSGCDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQAAAGNRTALTKSAVTMKAASVNRFNIA
Ga0193715_10034822	3300019878	Soil	MTATSSEAVLSSLTSGGDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAATIKATSINRIIIA
Ga0193707_10490281	3300019881	Soil	QLIRLGVITATSSEAVLSPLTSGGDDGRALFFSASAQQALFGQLPCLQAWPIGGLDTGQADAGNRTALTKSAVTMRMASVNRFITA
Ga0193747_10339202	3300019885	Soil	MTATSSEAVLSSLTSGGDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTMKAASVNRFNIA
Ga0193727_10727771	3300019886	Soil	AQQPLFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTMRMASVNRFITA
Ga0193718_10609151	3300019999	Soil	VITATNSEAVLSSLTSGCDDGRALFFAASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTIKVASINRFIIA
Ga0193730_10439183	3300020002	Soil	EAVLSSLTSGCDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQAAAGNRTALTKSAVTMKAASVNRFNIA
Ga0193730_10620181	3300020002	Soil	SAGRTGSKQHLRPGVITATNSEAVLSSLTSGCDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTIKVASINRFIIA
Ga0193749_10681781	3300020010	Soil	ECSAGRTGSKQLLKPGVITATSSEAVLSPLTSGGDDGRALFFSASAQQALFGQLPCLQAWPIGGLDTGQADAGNRTALTKSAVTMRIASVNRFITA
Ga0193734_10062554	3300020015	Soil	DGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQAAAGNRTALTKSAVTMKAASVNRFNI
Ga0193721_10077573	3300020018	Soil	VSSLTSGGNDGRALFFSAWAQQALFGQLPGLQDWPTGGLDAGQADAGNRTALAKSAITMKAASISRFIIG
Ga0193721_11009532	3300020018	Soil	ATSSEAVLSPLTSGGDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQAAAGNRTALTKSAVTMKAASVNRFNIA
Ga0179594_101286211	3300020170	Vadose Zone Soil	SGCDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTMKAASVNRFNIV
Ga0193709_10575701	3300021411	Soil	AAGSGECSAGRTGSKQHIRPGVITATNSEAVLSSLTSGCDDGRALFFAASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTIKVASINRFIIA
Ga0193750_10433431	3300021413	Soil	ALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTIKVASINRFIIA
Ga0222622_105153352	3300022756	Groundwater Sediment	SAQQALFGQLPCLQAWPIGGLDTGQADAGNRTALTKSAVTMRMASVNRFITA
Ga0222622_114777271	3300022756	Groundwater Sediment	AQQALFGQLPCLQAWPIGGLDTGQADAGNRTALAKSAVTMRIASVNRFITA
Ga0193714_10276991	3300023058	Soil	MTATSSEAVLSSLTSGGDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAATIKATSI
Ga0207700_102516841	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VLSSLTSGCDDGRALFFSASAQQALFGQLPCLQACPIGGLDAGQADAGNRMALTKSAVTMKAASVNRFNIA
Ga0207700_119219321	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	SNQLVRPGVVTATSSEAALSSLTSGGDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNPTALTKSAVTMKAASVNRFNTA
Ga0207669_105669452	3300025937	Miscanthus Rhizosphere	SEAALSSLTSGGDDGRALFFSASAQQALFGQLPCLQAWPIGGLDTGQADAGNRTALTKSAVTTKAASVNRFNTA
Ga0207691_101256624	3300025940	Miscanthus Rhizosphere	LTSGGDEGRALFFSASAQQALFGQLPCLQAWPIGGLDTGQADAGNRTALTKSAVTMRMASVNRFITA
Ga0207668_106399811	3300025972	Switchgrass Rhizosphere	ASAQQALFGQLPCLQAWPIGGLDTGQADAGNRTALTKSAVTMRMASVNRFITA
Ga0207683_106213033	3300026121	Miscanthus Rhizosphere	LSSLTSGGNDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTMRMASVNRFITA
Ga0209688_10808161	3300026305	Soil	LSSLTSGGDDGLALFFSASAQQALFGQLPCLQAWPIGGLNAGQADAGNRTALTKSAVTIKAASINRVIIA
Ga0209688_10983132	3300026305	Soil	FGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTIKVASINRFIIA
Ga0209468_11481102	3300026306	Soil	EAVLSSLTSGGDDGLALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSVVTMKAASINRFIIA
Ga0209153_10294472	3300026312	Soil	MTATSSEAVLSPLTSGGDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALMKSAVTMKAASVNRFNIA
Ga0209268_11356012	3300026314	Soil	DDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSVVTMKAASINRFNIA
Ga0209686_10142445	3300026315	Soil	GSAECSAGRTGSKQLVRPGVITATSSEAVVSSLTSGGDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSVVTMKAASINRFIIA
Ga0209155_10091478	3300026316	Soil	ITNGCDDGRALFFSASAQQALFGHLPCLQAWPIGGLDAGQADAGNRTALTKSAITMRAASVNRFIIA
Ga0209155_10247961	3300026316	Soil	ASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTIKVASINRFIIA
Ga0209155_10646751	3300026316	Soil	ASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSVVTMKAASINRFIIA
Ga0209154_12519242	3300026317	Soil	SSEAVLSSLTSGGDNGRDLFFSASAQQALFGQLPCLQAWPIGGLDTGQADAGNRTALMKSAVTMKAASINRFNIA
Ga0209154_12943792	3300026317	Soil	AQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTIKVASINRFIIA
Ga0209472_11939151	3300026323	Soil	TATSSEAVLSPLTSGCDDGRALFFSASAQQALFGQLPCLQAWPIGGLDTGQADAGNRTALTKSAVTMKAASINRFNIA
Ga0209470_100139520	3300026324	Soil	AQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSVVTMKAASINRFNIA
Ga0209801_10863643	3300026326	Soil	DGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSVVTMKAASINRFII
Ga0209473_13182711	3300026330	Soil	QALFGQLPCLQPWPIGGLDAGQADAGNRTALTKSAVTIKAASINRFNIV
Ga0209808_11469701	3300026523	Soil	AECSAGRTGSKQLVRTGVTTATSSEPALSSLTSGGDGGRALFFSASAQQALFGQLPGLQAWPIGGLDTGQVDAGNRTALTKSAATMKAASIKRFIIA
Ga0209807_10186134	3300026530	Soil	LFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSVVTMKAASINRFNIA
Ga0209807_10261515	3300026530	Soil	LTSGCDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTMMAASVNRFNIA
Ga0209807_10546543	3300026530	Soil	GSKQLVRPGVTTATSSEAALSSLTSGGDDGWALFFAASAQQALFEQLPCLQDWPIGGLDAGQADAGNRTALTKSAITMRAASINRFIIA
Ga0209805_10290871	3300026542	Soil	SSLTSGCDDGRALFFAASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTIKVASINRFIIA
Ga0209805_12314791	3300026542	Soil	GSAECSAGRTGSKQLVRPGVVTATSSEAALSSLTSGCDDGRALFFSASAQQALFGQLPCLQAWPIGGLDTGQADAGNRTALTKSTVTIKAASINRFIIA
Ga0209156_100323655	3300026547	Soil	ITSGGDDGRALFFAASAQQALFGQLPCLQAWPIGGLDAGQADARNRTALTKSAVTIKVASINRFIIA
Ga0209156_100402911	3300026547	Soil	MSSLTSGGDEGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGSRTALTKSAVTMK
Ga0209156_102061462	3300026547	Soil	SSLTSGCDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALMKSAVTMKAASVNRFNIA
Ga0209474_1000386215	3300026550	Soil	GRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSVVTMKAASINRFIIA
Ga0209474_1000660712	3300026550	Soil	TGSKQLVRPGVITATSSEAVLSSLTSGCDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTIKAASINRFNIV
Ga0209474_100184321	3300026550	Soil	GRALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALMKSAVTMKAASVNRFNIA
Ga0209577_106602242	3300026552	Soil	SLTSGCDDGRALFFSASAQQALFGQLPCLQAWPIGGLDSGQADAGNRTALTKSTVTIKAASINRFIIA
Ga0179587_110359481	3300026557	Vadose Zone Soil	NSEAVLSSLTSGCDDGGALFFAASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTIKVASINRFIIA
Ga0307308_103428131	3300028884	Soil	GCDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQAAAGNRTALTKSAVTMKAASVNRFNIA
Ga0307304_103478043	3300028885	Soil	LTSGCDDGRALFFSASAQQALFGQLPCLQAWPIGGLDAGQAAAGNRTALTKSAVTMKAASVNRFNIA
Ga0307473_113893691	3300031820	Hardwood Forest Soil	LSPLTSGGDDGRALFFSASAQQALFGQLPCLQAWPIGGLDTGQADAGNRTALTKSAVTMRMASVNRFITA
Ga0310892_113811552	3300031858	Soil	RALFFSASAQQALFGQLPCLQAWPIGGLDAGQADAGNRTALTKSAVTTKAASVNRFNTA
Ga0307471_1029246021	3300032180	Hardwood Forest Soil	LFFCAAAQHALLGQLPCSQASPAGGLETGHADAGNRTALTKSAIRIVMASTNRVAILPII

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F046032

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences