Metagenome Family F046282

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F046282
Family Type	Metagenome
Number of Sequences	151
Average Sequence Length	54 residues
Representative Sequence	MRKTTIALAFLVAWFFAAPTGWAQKSDDKEHAELAKALKDAKISLQRGLTASAKEGKP
Number of Associated Samples	121
Number of Associated Scaffolds	151

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.01 %
% of genes near scaffold ends (potentially truncated)	99.34 %
% of genes from short scaffolds (< 2000 bps)	92.72 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.351 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (29.801 % of family members)
Environment Ontology (ENVO)	Unclassified (45.033 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.642 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 62.79% β-sheet: 0.00% Coil/Unstructured: 37.21%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 151 Family Scaffolds
PF09828	Chrome_Resist	70.20
PF02417	Chromate_transp	9.93
PF07485	DUF1529	1.99
PF13551	HTH_29	0.66
PF00296	Bac_luciferase	0.66
PF00723	Glyco_hydro_15	0.66
PF09972	DUF2207	0.66

COG ID	Name	Functional Category	% Frequency in 151 Family Scaffolds
COG2059	Chromate transport protein ChrA	Inorganic ion transport and metabolism [P]	9.93
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.66
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.35 %
Unclassified	root	N/A	2.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.35 %
Unclassified	root	N/A	2.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.35 %
Unclassified	root	N/A	2.65 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	35.10 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.27 %
Unclassified	root	N/A	2.65 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	35.10 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9.27 %
Unclassified	root	N/A	2.65 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	35.10 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.28 %
Unclassified	root	N/A	2.65 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	29.80 %
Unclassified	root	N/A	2.65 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.99 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	29.80 %
Unclassified	root	N/A	2.65 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.32 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_100090091	Not Available	954	Open in IMG/M
3300000955\|JGI1027J12803_101346377	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300002558\|JGI25385J37094_10035089	All Organisms → cellular organisms → Bacteria	1752	Open in IMG/M
3300002561\|JGI25384J37096_10067500	All Organisms → cellular organisms → Bacteria	1319	Open in IMG/M
3300002561\|JGI25384J37096_10121345	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	876	Open in IMG/M
3300002562\|JGI25382J37095_10154681	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300002908\|JGI25382J43887_10023950	All Organisms → cellular organisms → Bacteria	3270	Open in IMG/M
3300004480\|Ga0062592_101263635	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300005166\|Ga0066674_10452596	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300005171\|Ga0066677_10717300	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300005174\|Ga0066680_10290131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1043	Open in IMG/M
3300005174\|Ga0066680_10422894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	844	Open in IMG/M
3300005175\|Ga0066673_10546608	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300005177\|Ga0066690_10335226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1025	Open in IMG/M
3300005178\|Ga0066688_10878528	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300005180\|Ga0066685_10130805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1696	Open in IMG/M
3300005180\|Ga0066685_10583961	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	769	Open in IMG/M
3300005181\|Ga0066678_10128110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1567	Open in IMG/M
3300005187\|Ga0066675_10361751	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300005330\|Ga0070690_100144096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1619	Open in IMG/M
3300005332\|Ga0066388_101229597	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300005436\|Ga0070713_101415049	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300005440\|Ga0070705_100206304	All Organisms → cellular organisms → Bacteria	1351	Open in IMG/M
3300005445\|Ga0070708_100520893	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300005446\|Ga0066686_10182453	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1400	Open in IMG/M
3300005468\|Ga0070707_100542989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1124	Open in IMG/M
3300005471\|Ga0070698_101269091	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300005518\|Ga0070699_102108634	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300005526\|Ga0073909_10456455	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300005536\|Ga0070697_101653444	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300005540\|Ga0066697_10092010	All Organisms → cellular organisms → Bacteria	1760	Open in IMG/M
3300005553\|Ga0066695_10046745	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2562	Open in IMG/M
3300005553\|Ga0066695_10409025	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	840	Open in IMG/M
3300005554\|Ga0066661_10185711	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1283	Open in IMG/M
3300005554\|Ga0066661_10620491	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300005558\|Ga0066698_10070757	All Organisms → cellular organisms → Bacteria	2250	Open in IMG/M
3300005558\|Ga0066698_10859109	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300005559\|Ga0066700_10158390	All Organisms → cellular organisms → Bacteria	1539	Open in IMG/M
3300005559\|Ga0066700_10275182	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1182	Open in IMG/M
3300005561\|Ga0066699_11076062	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300005568\|Ga0066703_10328738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	921	Open in IMG/M
3300005576\|Ga0066708_10162844	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1379	Open in IMG/M
3300005576\|Ga0066708_10440177	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300005576\|Ga0066708_10969042	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300005586\|Ga0066691_10160995	All Organisms → cellular organisms → Bacteria	1295	Open in IMG/M
3300005587\|Ga0066654_10789091	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	538	Open in IMG/M
3300005598\|Ga0066706_11164094	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300006034\|Ga0066656_10478440	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	812	Open in IMG/M
3300006791\|Ga0066653_10641633	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	543	Open in IMG/M
3300006797\|Ga0066659_10319024	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300006797\|Ga0066659_11847121	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300006845\|Ga0075421_100847156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1048	Open in IMG/M
3300006847\|Ga0075431_100669351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1017	Open in IMG/M
3300006903\|Ga0075426_11071823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	610	Open in IMG/M
3300006903\|Ga0075426_11412419	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	529	Open in IMG/M
3300009012\|Ga0066710_103066555	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	648	Open in IMG/M
3300009038\|Ga0099829_10029441	All Organisms → cellular organisms → Bacteria	3897	Open in IMG/M
3300009038\|Ga0099829_11196579	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300009089\|Ga0099828_11386452	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300009089\|Ga0099828_11826327	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300009090\|Ga0099827_10766132	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	835	Open in IMG/M
3300009090\|Ga0099827_11305640	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300009162\|Ga0075423_12469964	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300009777\|Ga0105164_10617870	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	536	Open in IMG/M
3300010303\|Ga0134082_10132091	Not Available	1002	Open in IMG/M
3300010304\|Ga0134088_10447996	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300010304\|Ga0134088_10578161	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300010320\|Ga0134109_10089210	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1063	Open in IMG/M
3300010321\|Ga0134067_10307118	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	613	Open in IMG/M
3300010326\|Ga0134065_10040243	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1406	Open in IMG/M
3300010329\|Ga0134111_10099317	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1115	Open in IMG/M
3300010336\|Ga0134071_10152437	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1125	Open in IMG/M
3300010397\|Ga0134124_10245347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1645	Open in IMG/M
3300010398\|Ga0126383_11417765	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	784	Open in IMG/M
3300011270\|Ga0137391_10660402	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300011270\|Ga0137391_11359549	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300012096\|Ga0137389_11715129	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300012189\|Ga0137388_11730063	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300012198\|Ga0137364_10015474	All Organisms → cellular organisms → Bacteria	4531	Open in IMG/M
3300012199\|Ga0137383_11376884	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	500	Open in IMG/M
3300012201\|Ga0137365_10807698	Not Available	685	Open in IMG/M
3300012202\|Ga0137363_11473212	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300012202\|Ga0137363_11596128	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300012203\|Ga0137399_10294664	All Organisms → cellular organisms → Bacteria	1339	Open in IMG/M
3300012203\|Ga0137399_11761785	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	508	Open in IMG/M
3300012204\|Ga0137374_10111210	All Organisms → cellular organisms → Bacteria	2550	Open in IMG/M
3300012205\|Ga0137362_10033536	All Organisms → cellular organisms → Bacteria	4089	Open in IMG/M
3300012205\|Ga0137362_10512554	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300012205\|Ga0137362_11339411	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300012206\|Ga0137380_11737077	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300012208\|Ga0137376_10627702	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300012350\|Ga0137372_10092068	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2559	Open in IMG/M
3300012351\|Ga0137386_11170233	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300012354\|Ga0137366_10828570	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	656	Open in IMG/M
3300012356\|Ga0137371_10865328	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300012357\|Ga0137384_11201703	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	603	Open in IMG/M
3300012361\|Ga0137360_10003720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9192	Open in IMG/M
3300012361\|Ga0137360_11249548	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300012362\|Ga0137361_10210064	All Organisms → cellular organisms → Bacteria	1763	Open in IMG/M
3300012582\|Ga0137358_11091678	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	509	Open in IMG/M
3300012685\|Ga0137397_10402177	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300012922\|Ga0137394_10773912	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300012925\|Ga0137419_11603649	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300012927\|Ga0137416_11586691	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300012927\|Ga0137416_11639287	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	586	Open in IMG/M
3300012929\|Ga0137404_11223146	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300012930\|Ga0137407_10149189	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2064	Open in IMG/M
3300012930\|Ga0137407_10246588	All Organisms → cellular organisms → Bacteria	1618	Open in IMG/M
3300012971\|Ga0126369_12837140	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300012975\|Ga0134110_10315206	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300012977\|Ga0134087_10287422	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	766	Open in IMG/M
3300014150\|Ga0134081_10360850	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	536	Open in IMG/M
3300014154\|Ga0134075_10579998	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300015053\|Ga0137405_1417737	All Organisms → cellular organisms → Bacteria	1653	Open in IMG/M
3300015358\|Ga0134089_10286354	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	681	Open in IMG/M
3300015374\|Ga0132255_102633896	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300018433\|Ga0066667_10445466	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1057	Open in IMG/M
3300018433\|Ga0066667_10658262	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	876	Open in IMG/M
3300018482\|Ga0066669_11492488	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300018482\|Ga0066669_12000849	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	543	Open in IMG/M
3300020170\|Ga0179594_10168487	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	814	Open in IMG/M
3300025972\|Ga0207668_12062057	Not Available	514	Open in IMG/M
3300026297\|Ga0209237_1096991	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300026298\|Ga0209236_1252896	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	580	Open in IMG/M
3300026309\|Ga0209055_1160764	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	731	Open in IMG/M
3300026313\|Ga0209761_1217613	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	806	Open in IMG/M
3300026326\|Ga0209801_1165299	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	923	Open in IMG/M
3300026328\|Ga0209802_1061390	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1811	Open in IMG/M
3300026328\|Ga0209802_1218038	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300026330\|Ga0209473_1340030	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300026333\|Ga0209158_1116283	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300026371\|Ga0257179_1032359	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	643	Open in IMG/M
3300026376\|Ga0257167_1002405	All Organisms → cellular organisms → Bacteria	1984	Open in IMG/M
3300026480\|Ga0257177_1024834	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	866	Open in IMG/M
3300026523\|Ga0209808_1147445	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300026524\|Ga0209690_1170117	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300026540\|Ga0209376_1362581	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	545	Open in IMG/M
3300026548\|Ga0209161_10257343	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	899	Open in IMG/M
3300026550\|Ga0209474_10595293	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	565	Open in IMG/M
3300027655\|Ga0209388_1172464	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	606	Open in IMG/M
3300027671\|Ga0209588_1015864	All Organisms → cellular organisms → Bacteria	2319	Open in IMG/M
3300027846\|Ga0209180_10510400	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300027873\|Ga0209814_10145577	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1016	Open in IMG/M
3300027909\|Ga0209382_10807531	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	998	Open in IMG/M
3300031720\|Ga0307469_12151097	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	543	Open in IMG/M
3300031740\|Ga0307468_102201856	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	533	Open in IMG/M
3300032180\|Ga0307471_100337455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1612	Open in IMG/M
3300032180\|Ga0307471_101334159	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	879	Open in IMG/M
3300032180\|Ga0307471_103237638	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	577	Open in IMG/M
3300032180\|Ga0307471_103267789	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300032180\|Ga0307471_103703233	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.04%
Host-Associated	Host-Associated	5.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.38%
Plants	Host-Associated → Plants	5.96%
Aquatic	Environmental → Aquatic	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.30%
Freshwater	Environmental → Aquatic → Freshwater	0.66%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.43%
Loam	Environmental → Terrestrial → Soil → Loam	7.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.64%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.66%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.06%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	37.09%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.64%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.99%
Unchlorinated	Environmental → Aquatic → Freshwater → Drinking Water → Unchlorinated	0.66%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.66%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	29.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	28.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.64%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.99%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.32%
Wastewater	Environmental → Aquatic → Freshwater → Drinking Water → Unchlorinated → Wastewater	0.66%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.66%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.66%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.66%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.66%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009777	Wastewater microbial communities from Netherlands to study Microbial Dark Matter (Phase II) - VDW unchlorinated drinking water	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026371	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B	Environmental	Open in IMG/M
3300026376	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-B	Environmental	Open in IMG/M
3300026480	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1000900911	3300000559	Soil	MKTTSFAVAFLVASVLAIPLGWAQQYDDKQHAELAKA
JGI1027J12803_1013463772	3300000955	Soil	MKRTALTLAFLVGWMFTVPLGMAQKSDDAEHAELAKALRSAKISLQRGLTASAKEGKPIS
JGI25385J37094_100350893	3300002558	Grasslands Soil	MRKVTIAAAFLVAWVFAVPPGWAQKYDDPEHAELAKALKD
JGI25384J37096_100675002	3300002561	Grasslands Soil	MRKTTIVLAFLVAWFFAVPIGWAQNYGDKEHAELAKALKDAKISLQRGLAASAKEGKPISAKYEV
JGI25384J37096_101213452	3300002561	Grasslands Soil	MRKVTIVVAFLVAWVFAVPPGWAQKYDDPEHAELAKALKDVKFPLQKGLS
JGI25382J37095_101546812	3300002562	Grasslands Soil	MRKTTIALAFLVAWFFAVPTGWAQNYGDTEHAELAKALKDAKISLQRGLTASAKE
JGI25382J43887_100239501	3300002908	Grasslands Soil	MRKVTIVVAFLVAWVFAVPPGWAQKYDDPEHAELAKALKDVKFPLQKGLSA
Ga0062592_1012636352	3300004480	Soil	MKRTAIALAFLVAWVFAMPAGWAQKPEDKEHAELAKALKDAKVPLQRGLTASAKEGKPISAKYEVEE
Ga0066674_104525961	3300005166	Soil	MRTNTTIALPFLVAWFFVATLASAQPHDDKERAELAKALPEAKISLQRGVTASAKTGTPISAKY
Ga0066677_107173001	3300005171	Soil	MKQTALTLAFLVAWMFTVPMGWAQKSADAEHAELAKALRDAKISLQRGLTASTKEGKPISAK
Ga0066680_102901313	3300005174	Soil	MRKTTIALAFLVAWFFAMPTGWAQKSDDKEHAELAKALKEAKISLQRGLTASAKAGKPISAKYEVE
Ga0066680_104228942	3300005174	Soil	MRKTTIALAFLVVWFFAMPTGWAQESDKEHAELAKALKEAKISLQRGLTASAKAGKPISAKYEVE
Ga0066673_105466082	3300005175	Soil	MRKTTIAVAFLVAWAFAVPHGWAQKYDDPEHAELAKALKDVKFPLQKGLSASTREGRAISAKYEVDHDKLQLS
Ga0066690_103352261	3300005177	Soil	MRKTTIALAFLVVWFFAMPTGWAQESDKEHAELAKALKEAKISLQRGLTASAKAGKPISAKYE
Ga0066688_108785282	3300005178	Soil	MRKATIAVAFLAACVFAVPQGWAQKYDDPAHAELAKALKDVKFSLQKGLSASAREGRPISAK
Ga0066685_101308053	3300005180	Soil	MKTTTIVLAFLVAWAFAVPTGWAQTSQDKEHAELAKALRDAKIPLQR
Ga0066685_105839611	3300005180	Soil	MRKVTIAVAFLVAWVFAAPPGWAQKYDDPEHAELAKALKDV
Ga0066678_101281101	3300005181	Soil	MRKTTIALAFLVAWFFAAPTGWAQKSDDKEHAELAKALKDAKISLQRGLTASAKEGKPISAK
Ga0066675_103617512	3300005187	Soil	MRKATIAVAFLVAWVFAVPLGWAQKYDDPEHAELAKALKDVTFPLQKGLSASAREGRPISAKYEV
Ga0070690_1001440961	3300005330	Switchgrass Rhizosphere	MKRTTIAAVSLVALVFAAPLGWAQPHDDKERAELAQALKDGKISLQQGATASAKEGKP
Ga0066388_1012295972	3300005332	Tropical Forest Soil	MRKTTIALAFLVAWFFAMPTGWTQPADDKEHAELAKALKDAKISLQSGL
Ga0070713_1014150492	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKKTALTLALLVAWMFTVPMGWAQKPNDAEHAELAKALGDAKISLQRGLTASTKEGKPISAKYEVE
Ga0070705_1002063041	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRKTTIVVASLVAWFFAAPMGWAQTPADKEHTELAKALKDAKISLQRGL
Ga0070708_1005208931	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRKTTIALAFLVAWFFAMPTGWAQKSDDKEHAELAKALKEAKISLQ
Ga0066686_101824531	3300005446	Soil	MRKTTIAVAFLVVWVFAVPPGWAQKYDDPEHAELAKALKDVKF
Ga0070707_1005429892	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRKTTIALAFLVAWFFAAPTGWAQKSDDKEHAELAKALKDAKISLQRGLTASAKEGKPIS
Ga0070698_1012690911	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MKKTALTLAFLVAWMFTMPMSWAQKSDDAEHAELAKALRDAKVSLQRGLTASTK
Ga0070699_1021086342	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MKKTALTLAFLVAWMFTVPMGWAQKPNDAEHAELAKALGDAKISLQRGLTASTKEGKPISAKYEVEH
Ga0073909_104564552	3300005526	Surface Soil	MRKTTCTLAFLVAWMFMMPLGWAQNTGDAEHTELAKALRDAKIPLQRGLTASMKEGKPISAKYE
Ga0070697_1016534441	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MKKTAFALAFLVAWMFTTPMGWAQNSSAAEHAELAKALRDAKIPLQRGLTASMKEGKPISAKYEVEH
Ga0066697_100920101	3300005540	Soil	MRKTTMALAFLMAWFVAMPAGWAQKYDDQEHAELAKALKAAKVSLQSGL
Ga0066695_100467451	3300005553	Soil	MRKTTIVLAFLVAWFFTVPMGWAQNSGDTEHAELAKALK
Ga0066695_104090252	3300005553	Soil	MRKVTIAVAFLVAWVFAAPPGWAQKYDDPEHAELAKALK
Ga0066661_101857113	3300005554	Soil	MRKTTIALAFLVAWFFAVPMGWAQNYGDKEHAELAKALKDAKISLQRGLT
Ga0066661_106204912	3300005554	Soil	MKQTAFTLAFLVAWMFTVPMGWAQKSADAEHAELAKALRDAKISLQRGLTAST
Ga0066698_100707571	3300005558	Soil	MRRTTMALAFLVAWFVATPAAWAQQYTDKEHTELAKALKAA
Ga0066698_108591092	3300005558	Soil	MRKTPIALAFLVAWFFAMPTGWAQQSDDKGHAELAKALKDAKISLQRGLAAS
Ga0066700_101583901	3300005559	Soil	MRKTPIAVAFLVAWAFAVPQGWAQKYDDPEHAELAKALKDVKFPLQKGLSASTREGRPISAKYEVDHDKL
Ga0066700_102751821	3300005559	Soil	MKTMTFAVAFLVACVLAVPTGWAQKSDDKEHAELAKALKDAKISL
Ga0066699_110760621	3300005561	Soil	MKQTALTLAFLVAWMFTVPMGWAQKSADAEHAELAKALRDAKISLQRGLTASTKEGKPI
Ga0066703_103287381	3300005568	Soil	MRKVIIAVAFLVAWVFAAPPGWAQKYDDPEHAELAKALKDVKFPLQKGLSASAREGRP
Ga0066708_101628441	3300005576	Soil	MRKMTTSAVAFLVAWCFAMPISWAQPHDDKERAELAKALKSVKTPLQQGLKASAKEGTPISAKYEVE
Ga0066708_104401772	3300005576	Soil	MRKATIAVAFLVAWVCAVPQGWAQKYDDPEHAELAK
Ga0066708_109690421	3300005576	Soil	MRKMTIALAFLVAWFFAGPTGWAQNYGDKEHAELA
Ga0066691_101609951	3300005586	Soil	MRKTTIALAFLVAWFFAAPTGWAQKSDDKEHAELAKALK
Ga0066654_107890911	3300005587	Soil	MRKTTTALAFLVAWFVAMPVDWAQKYDDKEHAELAKALKAAKVSLQS
Ga0066706_111640941	3300005598	Soil	MKRTAFTLAFLVAWMFMTPMGWAQNPGDAEHAELAKALRDAKIPLQRGLTASMKEGKP
Ga0066656_104784401	3300006034	Soil	MRTNTTIALPFLVAWFFVATLASAQPHDDKERAELAKALPEAKISLQRGVTASAKTG
Ga0066653_106416331	3300006791	Soil	MRRTTMALAFLVAWFVATPAAWAQQYTDKEHTEPAKALKAAKV
Ga0066659_103190241	3300006797	Soil	MRKVTIAVAFLVAWVFAAPPGWAQKYDDPEHAELAKALKDVKFPLQKGLSASAREGRPI
Ga0066659_118471212	3300006797	Soil	MRKTAIVMAFLVAGMFALPMGWAQKEEKERAELAKALKDVTFSLEKGPGARGREGK
Ga0075421_1008471561	3300006845	Populus Rhizosphere	MKAVTIVMATLAALTFAVPTGWAQTPADQEHAELAKALKDTKIPLERGLTASEKEGKPISAKYEVE
Ga0075431_1006693513	3300006847	Populus Rhizosphere	MKAVTIVMATLAALTFAVPTGWAQTPADQEHAELAKALKDTKIPLERGLTASEKEGKPI
Ga0075426_110718232	3300006903	Populus Rhizosphere	MKTIAITVALALIVAWPLAAPVAWASDEKEHAELAKALKDAKVPLERGLSASAREGKPIS
Ga0075426_114124192	3300006903	Populus Rhizosphere	MRKTTVALAFLVAWFFAMPIGWAQKPDDKEHADLA
Ga0066710_1030665551	3300009012	Grasslands Soil	MRKTTMALAFLMAWFVAMPVGWAQKYDDQEHAELAKALKAAKVSLQSGLQ
Ga0099829_100294415	3300009038	Vadose Zone Soil	MSKTTIVLAFLVAWFFAAPIGWAQNYGDKEHAELAKALKDAKISLQRGL
Ga0099829_111965791	3300009038	Vadose Zone Soil	MRKTTIALAFLVAWFFAVPIGWAQNYGDKEHAELAKALKDAKISLQRGLTASAKEGKP
Ga0099828_113864522	3300009089	Vadose Zone Soil	MRKTTIALAFLVAWFFAVPIGWAQNYGDKEHAELAKALKDAKISLQRGLTASAKEG
Ga0099828_118263271	3300009089	Vadose Zone Soil	MRTTTTGKTTTIAVALLVAWFFAAPTGWAQTPADKEHTELAKALKDAKISLQRGLTASAKEGKPISAKYEVEHGK
Ga0099827_107661321	3300009090	Vadose Zone Soil	MRTTTMALAFLVAWVFAAPMGWAQKYDDKEHAELAKALKDAKI
Ga0099827_113056402	3300009090	Vadose Zone Soil	MKKTAFTLAFLVAWMFMTPTGWAQNPGDAEHAELAKALRDAKVPLQRGLTASMKEGKPISAK
Ga0075423_124699642	3300009162	Populus Rhizosphere	MRKTTIALAFLVAWFIAVPIGWAQNYGDQEHAELAKALKDAKISLQRGLTA
Ga0105164_106178701	3300009777	Wastewater	MKTTTLAMAFLVVWVLAVPTGWAQKYDDKEHAELAKALKDAKIS
Ga0134082_101320912	3300010303	Grasslands Soil	MRKTTIAVAFLVVWVFAVPPGWAQKYDDPEHAELAKALKDVKFPLQK
Ga0134088_104479961	3300010304	Grasslands Soil	MRKMAIALAFLVVWFFAMPISWAQPHDDKERAELAKALKGVKTPLQQGLTASAKE
Ga0134088_105781612	3300010304	Grasslands Soil	MRNRESKNMRKMTMSAVAFLVAWCFAMPISWAQPHDDKERAELAKALKGVKTPLQQGLTASAKE
Ga0134109_100892102	3300010320	Grasslands Soil	MTMSAVAFLVAWCFAMPISWAQPHDDKERAELAKALKGVKTPLQQGLTASAKEGKPISAKYE
Ga0134067_103071182	3300010321	Grasslands Soil	MRKTTTALAFLVAWFVAMPVGWAQKYDDKEHAELAKALKAAKVSL
Ga0134065_100402431	3300010326	Grasslands Soil	MRKTTIAVAFLVAWAFAVPHGWAQKYDDPEHAELAKALKDVKFPLQKGLSASTREGR
Ga0134111_100993171	3300010329	Grasslands Soil	MALAFLVAWFVAMPAGWAQQYTDKEHAELAKALKAAKVSLQSGLQASAREGTPIS
Ga0134071_101524371	3300010336	Grasslands Soil	MRKTTIALAFLVAWFLAVPIGWAQNYGDKEHAELAKGMKDGKISLQRGLTASAKEGKPISAK
Ga0134124_102453471	3300010397	Terrestrial Soil	MKRTTIAAVSLVALVFAAPLGWAQPHDDKERAELAQALKAGKISLQQGAMASAKEGKPI
Ga0126383_114177652	3300010398	Tropical Forest Soil	MRKTTIALLFLTTWFFTMPTGWAQQSDDKEHAELAKALKDAKVSLQRGLTASAKEGKP
Ga0137391_106604022	3300011270	Vadose Zone Soil	MKTTTVALAFIVASIFAVPTGWAQKSDDKEHAELAK
Ga0137391_113595491	3300011270	Vadose Zone Soil	MRKTTIALAFLVTWFFAVPIGWAQNYGDKEHAELAKALKDAKISLQRGL
Ga0137389_117151291	3300012096	Vadose Zone Soil	MRKTVATLVFLVAWWVFAVPVGWAQKSDDQEHAELAKALKDAKIPLQ
Ga0137388_117300631	3300012189	Vadose Zone Soil	MRKMTIALVFLVAWFFAMPTGWAQNYGDKEHAELAKALKDAKISLQRGLTASAKEGKPISAKYEVEHG
Ga0137364_100154741	3300012198	Vadose Zone Soil	MALAFLVAWFVAMPAGWAQQYTDKEHAELAKALKAAKVSLQSGLQASAREGKPISAK
Ga0137383_113768842	3300012199	Vadose Zone Soil	MKTTTIVLAFLVAWAFAVPTGWAQTSQDKEHAELAKALKDAKIPLQRGLTASAKEGKPISAK
Ga0137365_108076982	3300012201	Vadose Zone Soil	MPKTSLTTIAFFVAWLFAAALGAAQPHDDKERAELATALKDVKLSLQQGVAASAKEGKPI
Ga0137363_114732122	3300012202	Vadose Zone Soil	MRKTTTIALAFLVSWLLAMPAGWAQQSDDKEHAELAKALKDAKISLQRGLTASAKEGKPISAK
Ga0137363_115961281	3300012202	Vadose Zone Soil	MRKTAIVMAFLVAWMFGLPMGWAQKEDKERAELAKALKDVKFSLEKGLGASGREGKPISG
Ga0137399_102946642	3300012203	Vadose Zone Soil	MRKTTTIALAFLVSWLLAMPAGWAQQSDDKEHAELAKALKD
Ga0137399_117617851	3300012203	Vadose Zone Soil	MKMTTIVLAFLVAGAFAVPTGWAQTSQDKEHAELAK
Ga0137374_101112101	3300012204	Vadose Zone Soil	MTKMTIALAFLVVWCFAMPTGWAQTPEHKPDAELAKALKDAKIS
Ga0137362_100335366	3300012205	Vadose Zone Soil	MKKTAFTLAFLVAWMFMTPMGWAQNPGDAEHAELAKALRDAKIPLQRGLTASMKEGKPIS
Ga0137362_105125541	3300012205	Vadose Zone Soil	MRKTTIALAFLVAWFFAAPTGWAQKSDDKEHAELAKALKDAKISLQRGLTASAKEGKP
Ga0137362_113394111	3300012205	Vadose Zone Soil	MRKTTIAMAFLVAWFFAVPLGWAQNYGDKEHAELAKALTGAKISLQRGLTAIAKEGKPISAKYD
Ga0137380_117370771	3300012206	Vadose Zone Soil	MRKITIALAFLVAWFFAMPTGWTQQSDDKGHAELAKVLKDAKISLQRGLTASAKEGKPISAKYEVEH
Ga0137376_106277022	3300012208	Vadose Zone Soil	MKTTTTVLAFFVASILAIPAGWAQKSDDQEHAELAKALRDAKISLQRGLTASAKEG
Ga0137372_100920681	3300012350	Vadose Zone Soil	MPLACLLVWEFAVPMGWAQKSDDTAHAELAKALRAAKI
Ga0137386_111702332	3300012351	Vadose Zone Soil	MRSMAIAVTFLVAWLFATPTVWAQKDESKEHAELAKAMKDAKVSLEKGLSVSTHEGKPISAKYEV
Ga0137366_108285701	3300012354	Vadose Zone Soil	MRANTTIALPFLVAWFFVATLASAQPHDDKERAELAKALTEAKISLQRGVTASAKTGKPI
Ga0137371_108653281	3300012356	Vadose Zone Soil	MTLACLLVWVFAVPMGWAQKSDDTAHAELAKALRDAKISL
Ga0137384_112017032	3300012357	Vadose Zone Soil	MRSMAIAVTFLVAWLFATPTAWAQKDEAKEHAELAKAMKDAKVSLEKGLSVSAHEGKPISAKYEV
Ga0137360_100037208	3300012361	Vadose Zone Soil	MSKTTIVLAFLVAWFFAAPIGWAQNYGDKEHAELAKALKDAKISLQRGLAASAKEGKPISAKYEVE
Ga0137360_112495482	3300012361	Vadose Zone Soil	MRKTTIALAFLVAWFFAVPTGWAQNYGDKEHAELAKALKDAKISLQR
Ga0137361_102100641	3300012362	Vadose Zone Soil	MRKTAIVMAFLVAWMFALPMGWAQTGEDKERAELAKALKDVKFSLEKGLGASGREGKPISGKDE
Ga0137358_110916781	3300012582	Vadose Zone Soil	MKTAAIAVALTVAWMLGLPAVWASDDKDHAELAKALKDAKIPLERGLAASAKEGKPIS
Ga0137397_104021773	3300012685	Vadose Zone Soil	MKMIGIMAAFAAALVFAAPTSWAQTSDDKAKGHAELEKALKDAKIPLERGLTASASE
Ga0137394_107739121	3300012922	Vadose Zone Soil	MKTTTMVLAVVAALAMVVPTGWAQTPDDKEHADLAKALKDAKIPLERGLTASAKAGKPISAKYE
Ga0137419_116036492	3300012925	Vadose Zone Soil	MKKTALTLAFLVAWMFTIPMSWAQKSDDAEHAELAKALRDAKISLQRGLTASTKEGKPISAKYEVE
Ga0137416_115866911	3300012927	Vadose Zone Soil	MTKMTIALAFLVAWFFAVPTGWAQNYGDKEHAELAKALKDAKISLQRGLTASAKEGKPISAKYEVE
Ga0137416_116392872	3300012927	Vadose Zone Soil	MKMTTIVLAFLVAGAFAVPTGWAQTSQDKEHAELAKALKDAK
Ga0137404_112231461	3300012929	Vadose Zone Soil	MRKTTIALTFFVAWLLAMPTVWAQKDEAKEHAELAKAMKDTKVSLQKGLAA
Ga0137407_101491894	3300012930	Vadose Zone Soil	MKKTAFTLAFLVAWMFMTPMGWAQNPGDAEHAELAKALRDAKIPLQRGLTASMKEGKPISAKYEV
Ga0137407_102465881	3300012930	Vadose Zone Soil	MRKMAIAVAFLVAWVFAMPTGWAQKSEDKEHAELAKALKDAKVSLQRGLT
Ga0126369_128371401	3300012971	Tropical Forest Soil	MRTLAIALSLLVAAFVAIPTAWAQTSEEKEHAVLAKALKDAKMPLQRGLTASATEGKPISAKYEMDE
Ga0134110_103152062	3300012975	Grasslands Soil	MKTMKTMAAFVIALVFVVPTGWAQTPADQEHAELAKALKDAKIPLERGLTASAKEGKPISAKY
Ga0134087_102874221	3300012977	Grasslands Soil	MRKTTTALAFLVAWFVAMPVGWAQKYDDKEHAELAKALKAAKVSLQSGLQASARE
Ga0134081_103608501	3300014150	Grasslands Soil	MRKATIAVAFLAACVFAVPQGWAQKYDDPEHAELAKALKDVKFSLQKGL
Ga0134075_105799981	3300014154	Grasslands Soil	MRKMTIALAFLVAWFFAMPTGWAQKSDDKEHAELGKALKDAKISLQRGLSASAKEGRP
Ga0137405_14177374	3300015053	Vadose Zone Soil	MRKVTIVVAFLVAWVFAVPPGWAQKYDDPEHAELAKALKDVKFPLQKGLSASAREGRPISASTK*
Ga0134089_102863541	3300015358	Grasslands Soil	MRKTTTALAFLVAWFVAMPVGWAQKYDDQEHAELAKALKA
Ga0132255_1026338962	3300015374	Arabidopsis Rhizosphere	LKTTALAVAFVVASALAVPMGWAQQQNDKEHAELAKGLKDAKIPLQRGLTASAKEG
Ga0066667_104454662	3300018433	Grasslands Soil	MRKMTIALAFLVAWFFAGPTGWAQNYGDKEHAELAKGMKDAKISLQRGLTASAKEGKPSSAKYELEEG
Ga0066667_106582622	3300018433	Grasslands Soil	MRRTTMALAFLVAWFVAMPAGWAQQYTDKEHAELAKALK
Ga0066669_114924882	3300018482	Grasslands Soil	MRKTTIALVFLVAWFLAVPTGWAQNYGDKEHADLAKRMKDAKISLQRG
Ga0066669_120008491	3300018482	Grasslands Soil	MKTTTFAVAFLVACAIAVPTGWAQTSQDKEHAELAKALKDAKIPLQRGL
Ga0179594_101684872	3300020170	Vadose Zone Soil	MKKTTIALAFLVACFVASPTGWAQNYGDAEHAELAKALKDAKITLQRGLT
Ga0207668_120620572	3300025972	Switchgrass Rhizosphere	MKTTSFAVAFLVASVLAVPLGWAQQYDDKQHAELAKALKDAKVSLQRGLTASAKEGKP
Ga0209237_10969912	3300026297	Grasslands Soil	MRKATIAVAFLVVWVFAVPQGWAQKYDDPEHAELAKALKDVKFPLQKGLSASAREGR
Ga0209236_12528962	3300026298	Grasslands Soil	MKTTTIVLAFLVAWAFAVPTGWAQTSQDKEHAELAKALRDAKIPLQRGLTASAKEGKPISAKYE
Ga0209055_11607642	3300026309	Soil	MRKTTIALAFLVAWFFAVPMGWAQNYGDKEHAELAKALKDAKIPLQRG
Ga0209761_12176131	3300026313	Grasslands Soil	MRKMAIALAFLVVWFFAMPISWAQPHDDKERAELAKALKGVKTPLQQGLTASAKEGK
Ga0209801_11652992	3300026326	Soil	MRKVTIAVAFLVAWVFAVPLGWAQKYDDPEHAELAKALKDVKFPLQKGLSASAREGRPIS
Ga0209802_10613902	3300026328	Soil	MKTTTIVLAFLVAWAFAVPTGWAQTSQDKEHAELAKALRDAK
Ga0209802_12180382	3300026328	Soil	MRKTTIALAFLVAWFFAVPIGWAQNYGDKEHAELAK
Ga0209473_13400302	3300026330	Soil	MNTMRTIAAFVIGLVFVVPTGWAQTPADQEHAELAKALKDAKIPLERGLTASAKEGKP
Ga0209158_11162832	3300026333	Soil	MRKTTIALAFLVVWFFAMPTGWAQESDKEHAELAKALKEA
Ga0257179_10323591	3300026371	Soil	MKKTALTLAFLVAWMFTMPMSSAQKSDDAEHAELAKALRDAKISLQRGLTASTKEGKPISAKY
Ga0257167_10024053	3300026376	Soil	MSKTTIVLAFLVAWFFAAPIGWAQNYGDKEHAELAKALKDAKISLQRGLAASAKEG
Ga0257177_10248341	3300026480	Soil	MKKTALTLAFLVAWMFTVPMGWAQKSDDAEHAELAKALRDAKISLQRGL
Ga0209808_11474451	3300026523	Soil	MRKATIAVAFLVAWVCAVPQGWAQKYDDPEHAELAKALKDVTFPLQNGLSASAREGRPISAKY
Ga0209690_11701172	3300026524	Soil	MRKATIAVAFLVVWVFAVPQGWAQKYDDPEHAELAKALKDVKFPLQKGLSASAREGRPIS
Ga0209376_13625812	3300026540	Soil	MRKTTTALAFLVAWFVAMPVGWAQKYDDKEHAELAKALKAAKVSLQSGL
Ga0209161_102573432	3300026548	Soil	MRKTTIAVAFLVAWAFAVPQGWAQKYDDPEHAELAKALKDVKFPLQKGLS
Ga0209474_105952931	3300026550	Soil	MKTTTFAVAFLVACAIAVPSGWAQTSQDKEHAELAKALKDAKIPLQRGLT
Ga0209388_11724641	3300027655	Vadose Zone Soil	MRTTAATLVFLVAWVFAVPVGWAQKSDDQEHAELAKALKDAKIPLQQGLKASAKQGTPISAKYEVEH
Ga0209588_10158644	3300027671	Vadose Zone Soil	MKMIRIMAAIAAALVFIVPTGWAQAFDDKAKEHAELEKALNGAKIPLERGLTASAKEG
Ga0209180_105104001	3300027846	Vadose Zone Soil	MRKTAIVMAFLVAWMFGLPTGWAQKEDKERAELAKALKDVK
Ga0209814_101455773	3300027873	Populus Rhizosphere	MRKTTIALAFLMTWLFAMPTCWAQQSDDKEHAELAKALKDAKISLQRGLTASAK
Ga0209382_108075313	3300027909	Populus Rhizosphere	MKAVTIVMATLAALTFAVPTGWAQTPADQEHAELA
Ga0307469_121510972	3300031720	Hardwood Forest Soil	MRKTTTIAVALLVAWFFAAPTGWAQTPEDKEHAELAKALKDAKISLQRGLTA
Ga0307468_1022018562	3300031740	Hardwood Forest Soil	MRRTTVVLAFLVAWFLAVPMGWGQTYGDKEHAELAKALKSAKLSLQRGLTASAKEGKPISAKYE
Ga0307471_1003374553	3300032180	Hardwood Forest Soil	VRKTTIALAFLVAWFVALPTGWAQKSDDKEHAELAKALKDAKVSLQRG
Ga0307471_1013341592	3300032180	Hardwood Forest Soil	MRKTTIALAFLVTWFFAMPTGWAQQSDDKEHAELAKALKG
Ga0307471_1032376382	3300032180	Hardwood Forest Soil	MRKTTIALAFLMAWFFAMPTGWAQQSEDKEHAELAKALKDAKVSLQRGLTASAKEGKPI
Ga0307471_1032677892	3300032180	Hardwood Forest Soil	MKKTALTLAFLVAWMFTVPMGWAQKPNDAEHAELAKALGDAKISLQRG
Ga0307471_1037032332	3300032180	Hardwood Forest Soil	MRKTTIALAFLVVWFFAMPTGWAQKSDDKEHAELAKALKEAKISLQRGLTASAKAGK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F046282

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences