NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F046395

Metagenome Family F046395

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F046395
Family Type Metagenome
Number of Sequences 151
Average Sequence Length 94 residues
Representative Sequence MGEAPSRQELEAAFCWEADDEVPRRPAMTEFRRRLRYHQAQWREANGHPIGSQPIAPRPHGKPARPVGSRLPLAYARETGANFLTA
Number of Associated Samples 128
Number of Associated Scaffolds 151

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 47.68 %
% of genes near scaffold ends (potentially truncated) 98.68 %
% of genes from short scaffolds (< 2000 bps) 92.72 %
Associated GOLD sequencing projects 126
AlphaFold2 3D model prediction Yes
3D model pTM-score0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (99.338 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(21.192 % of family members)
Environment Ontology (ENVO) Unclassified
(31.126 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(46.358 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 31.58%    β-sheet: 0.00%    Coil/Unstructured: 68.42%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.54
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 151 Family Scaffolds
PF06224HTH_42 4.64
PF07883Cupin_2 3.97
PF13191AAA_16 3.31
PF01451LMWPc 2.65
PF07676PD40 2.65
PF00072Response_reg 1.99
PF00583Acetyltransf_1 1.99
PF01738DLH 1.99
PF08818DUF1801 1.99
PF01176eIF-1a 1.99
PF00149Metallophos 1.32
PF028262-Hacid_dh_C 1.32
PF00144Beta-lactamase 1.32
PF02517Rce1-like 1.32
PF00106adh_short 0.66
PF13418Kelch_4 0.66
PF00196GerE 0.66
PF01329Pterin_4a 0.66
PF00107ADH_zinc_N 0.66
PF13602ADH_zinc_N_2 0.66
PF07681DoxX 0.66
PF00892EamA 0.66
PF03824NicO 0.66
PF01243Putative_PNPOx 0.66
PF00027cNMP_binding 0.66
PF04434SWIM 0.66
PF04978DUF664 0.66
PF06148COG2 0.66
PF00498FHA 0.66
PF09723Zn-ribbon_8 0.66
PF01022HTH_5 0.66
PF12681Glyoxalase_2 0.66
PF00685Sulfotransfer_1 0.66
PF07690MFS_1 0.66
PF08447PAS_3 0.66
PF04962KduI 0.66
PF04237YjbR 0.66
PF00561Abhydrolase_1 0.66

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 151 Family Scaffolds
COG3214DNA glycosylase YcaQ, repair of DNA interstrand crosslinksReplication, recombination and repair [L] 4.64
COG4430Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 familyFunction unknown [S] 1.99
COG5646Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)Posttranslational modification, protein turnover, chaperones [O] 1.99
COG5649Uncharacterized conserved protein, DUF1801 domainFunction unknown [S] 1.99
COG0361Translation initiation factor IF-1Translation, ribosomal structure and biogenesis [J] 1.99
COG1266Membrane protease YdiL, CAAX protease familyPosttranslational modification, protein turnover, chaperones [O] 1.32
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 1.32
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 1.32
COG2367Beta-lactamase class ADefense mechanisms [V] 1.32
COG4449Predicted protease, Abi (CAAX) familyGeneral function prediction only [R] 1.32
COG2154Pterin-4a-carbinolamine dehydrataseCoenzyme transport and metabolism [H] 0.66
COG2259Uncharacterized membrane protein YphA, DoxX/SURF4 familyFunction unknown [S] 0.66
COG2315Predicted DNA-binding protein with ‘double-wing’ structural motif, MmcQ/YjbR familyTranscription [K] 0.66
COG37175-keto 4-deoxyuronate isomeraseCarbohydrate transport and metabolism [G] 0.66
COG4270Uncharacterized membrane proteinFunction unknown [S] 0.66
COG4279Uncharacterized protein, contains SWIM-type Zn finger domainFunction unknown [S] 0.66
COG4715Uncharacterized protein, contains SWIM-type Zn finger domainFunction unknown [S] 0.66
COG5431Predicted nucleic acid-binding protein, contains SWIM-type Zn-finger domainGeneral function prediction only [R] 0.66

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.34 %
UnclassifiedrootN/A0.66 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000887|AL16A1W_10255223All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1463Open in IMG/M
3300000956|JGI10216J12902_104742770All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4119Open in IMG/M
3300000956|JGI10216J12902_114194665All Organisms → cellular organisms → Bacteria → Terrabacteria group834Open in IMG/M
3300001538|A10PFW1_10555341All Organisms → cellular organisms → Bacteria1688Open in IMG/M
3300004480|Ga0062592_101500287All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → Nitriliruptor → Nitriliruptor alkaliphilus647Open in IMG/M
3300005174|Ga0066680_10487154All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi776Open in IMG/M
3300005180|Ga0066685_10795212All Organisms → cellular organisms → Bacteria → Terrabacteria group641Open in IMG/M
3300005181|Ga0066678_10430459All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria877Open in IMG/M
3300005183|Ga0068993_10118311All Organisms → cellular organisms → Bacteria → Terrabacteria group866Open in IMG/M
3300005332|Ga0066388_101110468All Organisms → cellular organisms → Bacteria → Terrabacteria group1340Open in IMG/M
3300005337|Ga0070682_101766423All Organisms → cellular organisms → Bacteria → Terrabacteria group539Open in IMG/M
3300005340|Ga0070689_102001362All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300005356|Ga0070674_100939196All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia756Open in IMG/M
3300005364|Ga0070673_100810046All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria865Open in IMG/M
3300005471|Ga0070698_100823018All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium873Open in IMG/M
3300005471|Ga0070698_101241292All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium695Open in IMG/M
3300005518|Ga0070699_101045912All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi749Open in IMG/M
3300005534|Ga0070735_10080285All Organisms → cellular organisms → Bacteria2082Open in IMG/M
3300005536|Ga0070697_100348951All Organisms → cellular organisms → Bacteria → Terrabacteria group1278Open in IMG/M
3300005553|Ga0066695_10334356All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium952Open in IMG/M
3300005554|Ga0066661_10100505All Organisms → cellular organisms → Bacteria → Terrabacteria group1728Open in IMG/M
3300005555|Ga0066692_10196025All Organisms → cellular organisms → Bacteria → Terrabacteria group1262Open in IMG/M
3300005574|Ga0066694_10273879All Organisms → cellular organisms → Bacteria → Terrabacteria group802Open in IMG/M
3300005586|Ga0066691_10848218All Organisms → cellular organisms → Bacteria → Terrabacteria group538Open in IMG/M
3300005587|Ga0066654_10747469All Organisms → cellular organisms → Bacteria → Terrabacteria group551Open in IMG/M
3300005713|Ga0066905_100892692All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium777Open in IMG/M
3300005985|Ga0081539_10362715All Organisms → cellular organisms → Bacteria → Terrabacteria group607Open in IMG/M
3300006358|Ga0068871_101889592All Organisms → cellular organisms → Bacteria → Terrabacteria group567Open in IMG/M
3300006794|Ga0066658_10513182All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium652Open in IMG/M
3300006853|Ga0075420_101016983All Organisms → cellular organisms → Bacteria → Terrabacteria group713Open in IMG/M
3300007258|Ga0099793_10191918All Organisms → cellular organisms → Bacteria978Open in IMG/M
3300009012|Ga0066710_103782227All Organisms → cellular organisms → Bacteria → Terrabacteria group568Open in IMG/M
3300009012|Ga0066710_103786938All Organisms → cellular organisms → Bacteria → Terrabacteria group568Open in IMG/M
3300009012|Ga0066710_103935059All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium556Open in IMG/M
3300009146|Ga0105091_10249854All Organisms → cellular organisms → Bacteria → Terrabacteria group855Open in IMG/M
3300009176|Ga0105242_10154613All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium2003Open in IMG/M
3300009818|Ga0105072_1060220All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria730Open in IMG/M
3300010038|Ga0126315_10353424All Organisms → cellular organisms → Bacteria → Terrabacteria group916Open in IMG/M
3300010040|Ga0126308_10029880All Organisms → cellular organisms → Bacteria → Terrabacteria group3031Open in IMG/M
3300010166|Ga0126306_11305801All Organisms → cellular organisms → Bacteria → Terrabacteria group598Open in IMG/M
3300010325|Ga0134064_10160637All Organisms → cellular organisms → Bacteria → Terrabacteria group783Open in IMG/M
3300010358|Ga0126370_10232846All Organisms → cellular organisms → Bacteria → Terrabacteria group1416Open in IMG/M
3300011119|Ga0105246_10920938All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales785Open in IMG/M
3300011270|Ga0137391_11339180All Organisms → cellular organisms → Bacteria → Terrabacteria group563Open in IMG/M
3300011271|Ga0137393_11664791All Organisms → cellular organisms → Bacteria → Terrabacteria group527Open in IMG/M
3300012189|Ga0137388_11361218All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia649Open in IMG/M
3300012189|Ga0137388_11799694All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria544Open in IMG/M
3300012201|Ga0137365_10139979All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1819Open in IMG/M
3300012206|Ga0137380_11155768All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300012207|Ga0137381_10703677All Organisms → cellular organisms → Bacteria → Terrabacteria group878Open in IMG/M
3300012208|Ga0137376_10384567All Organisms → cellular organisms → Bacteria → Terrabacteria group1219Open in IMG/M
3300012208|Ga0137376_10549838All Organisms → cellular organisms → Bacteria → Terrabacteria group1000Open in IMG/M
3300012209|Ga0137379_10065376All Organisms → cellular organisms → Bacteria3500Open in IMG/M
3300012209|Ga0137379_10510117All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1110Open in IMG/M
3300012209|Ga0137379_10618000All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21990Open in IMG/M
3300012210|Ga0137378_10551612All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium1061Open in IMG/M
3300012210|Ga0137378_11449661All Organisms → cellular organisms → Bacteria → Terrabacteria group599Open in IMG/M
3300012211|Ga0137377_11669813All Organisms → cellular organisms → Bacteria → Terrabacteria group559Open in IMG/M
3300012350|Ga0137372_10199845All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1601Open in IMG/M
3300012350|Ga0137372_10686191All Organisms → cellular organisms → Bacteria → Proteobacteria743Open in IMG/M
3300012353|Ga0137367_10765869All Organisms → cellular organisms → Bacteria → Terrabacteria group671Open in IMG/M
3300012354|Ga0137366_10160941All Organisms → cellular organisms → Bacteria1687Open in IMG/M
3300012355|Ga0137369_10053406All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3521Open in IMG/M
3300012356|Ga0137371_10024695All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora4627Open in IMG/M
3300012356|Ga0137371_11039898All Organisms → cellular organisms → Bacteria → Terrabacteria group619Open in IMG/M
3300012360|Ga0137375_10176892All Organisms → cellular organisms → Bacteria2052Open in IMG/M
3300012530|Ga0136635_10035819All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1483Open in IMG/M
3300012532|Ga0137373_10277041All Organisms → cellular organisms → Bacteria → Terrabacteria group1343Open in IMG/M
3300012918|Ga0137396_10198254All Organisms → cellular organisms → Bacteria → Terrabacteria group1475Open in IMG/M
3300012922|Ga0137394_10434533All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1118Open in IMG/M
3300012930|Ga0137407_12339116All Organisms → cellular organisms → Bacteria → Terrabacteria group511Open in IMG/M
3300012948|Ga0126375_11323579All Organisms → cellular organisms → Bacteria → Terrabacteria group606Open in IMG/M
3300012972|Ga0134077_10088334All Organisms → cellular organisms → Bacteria → Proteobacteria1187Open in IMG/M
3300012977|Ga0134087_10249215All Organisms → cellular organisms → Bacteria813Open in IMG/M
3300012986|Ga0164304_10276691All Organisms → cellular organisms → Bacteria → Terrabacteria group1138Open in IMG/M
3300012987|Ga0164307_10466965All Organisms → cellular organisms → Bacteria → Terrabacteria group946Open in IMG/M
3300012989|Ga0164305_10067899All Organisms → cellular organisms → Bacteria2167Open in IMG/M
3300013308|Ga0157375_13258476All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300013772|Ga0120158_10343956All Organisms → cellular organisms → Bacteria → Terrabacteria group704Open in IMG/M
3300013772|Ga0120158_10354161All Organisms → cellular organisms → Bacteria → Terrabacteria group689Open in IMG/M
3300014326|Ga0157380_12578557All Organisms → cellular organisms → Bacteria → Terrabacteria group574Open in IMG/M
3300015245|Ga0137409_11125072All Organisms → cellular organisms → Bacteria → Terrabacteria group625Open in IMG/M
3300015358|Ga0134089_10309805All Organisms → cellular organisms → Bacteria → Terrabacteria group657Open in IMG/M
3300015359|Ga0134085_10468621All Organisms → cellular organisms → Bacteria → Terrabacteria group573Open in IMG/M
3300015372|Ga0132256_100138750All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae2423Open in IMG/M
3300015373|Ga0132257_100663898All Organisms → cellular organisms → Bacteria1293Open in IMG/M
3300015373|Ga0132257_103503338All Organisms → cellular organisms → Bacteria → Terrabacteria group571Open in IMG/M
3300015374|Ga0132255_104567146All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300017656|Ga0134112_10084203All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales1184Open in IMG/M
3300017659|Ga0134083_10145008All Organisms → cellular organisms → Bacteria958Open in IMG/M
3300018027|Ga0184605_10102791All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae1262Open in IMG/M
3300018027|Ga0184605_10425070All Organisms → cellular organisms → Bacteria → Terrabacteria group589Open in IMG/M
3300018031|Ga0184634_10469558All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria565Open in IMG/M
3300018055|Ga0184616_10209108All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium734Open in IMG/M
3300018061|Ga0184619_10126268All Organisms → cellular organisms → Bacteria → Terrabacteria group1160Open in IMG/M
3300018061|Ga0184619_10190039All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria943Open in IMG/M
3300018061|Ga0184619_10521060All Organisms → cellular organisms → Bacteria → Terrabacteria group523Open in IMG/M
3300018076|Ga0184609_10315945All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli730Open in IMG/M
3300018082|Ga0184639_10656764All Organisms → cellular organisms → Bacteria → Terrabacteria group507Open in IMG/M
3300018429|Ga0190272_11747716All Organisms → cellular organisms → Bacteria → Terrabacteria group646Open in IMG/M
3300018433|Ga0066667_10176585All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1541Open in IMG/M
3300018433|Ga0066667_10729646All Organisms → cellular organisms → Bacteria834Open in IMG/M
3300018433|Ga0066667_11380282All Organisms → cellular organisms → Bacteria → Terrabacteria group618Open in IMG/M
3300018468|Ga0066662_12606034All Organisms → cellular organisms → Bacteria → Terrabacteria group534Open in IMG/M
3300018476|Ga0190274_11561062All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium752Open in IMG/M
3300018476|Ga0190274_13258038All Organisms → cellular organisms → Bacteria → Terrabacteria group547Open in IMG/M
3300019767|Ga0190267_10854007All Organisms → cellular organisms → Bacteria → Terrabacteria group615Open in IMG/M
3300019867|Ga0193704_1079199All Organisms → cellular organisms → Bacteria → Terrabacteria group605Open in IMG/M
3300021078|Ga0210381_10271705All Organisms → cellular organisms → Bacteria → Terrabacteria group607Open in IMG/M
3300025910|Ga0207684_10790964All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi802Open in IMG/M
3300025926|Ga0207659_11002634All Organisms → cellular organisms → Bacteria → Terrabacteria group719Open in IMG/M
3300025934|Ga0207686_10147654All Organisms → cellular organisms → Bacteria → Terrabacteria group1633Open in IMG/M
3300025935|Ga0207709_11356510All Organisms → cellular organisms → Bacteria → Terrabacteria group588Open in IMG/M
3300025960|Ga0207651_11348177All Organisms → cellular organisms → Bacteria → Terrabacteria group642Open in IMG/M
3300026301|Ga0209238_1183667All Organisms → cellular organisms → Bacteria → Terrabacteria group615Open in IMG/M
3300027846|Ga0209180_10422055All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia754Open in IMG/M
3300027882|Ga0209590_10279203All Organisms → cellular organisms → Bacteria → Terrabacteria group1070Open in IMG/M
3300027957|Ga0209857_1041601All Organisms → cellular organisms → Bacteria → Terrabacteria group825Open in IMG/M
3300028379|Ga0268266_11309036All Organisms → cellular organisms → Bacteria700Open in IMG/M
3300028673|Ga0257175_1077119All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia636Open in IMG/M
3300028710|Ga0307322_10177795All Organisms → cellular organisms → Bacteria → Terrabacteria group575Open in IMG/M
3300028711|Ga0307293_10178867All Organisms → cellular organisms → Bacteria → Terrabacteria group675Open in IMG/M
3300028714|Ga0307309_10210101All Organisms → cellular organisms → Bacteria → Terrabacteria group516Open in IMG/M
3300028718|Ga0307307_10209543All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli618Open in IMG/M
3300028719|Ga0307301_10082842All Organisms → cellular organisms → Bacteria → Terrabacteria group1007Open in IMG/M
3300028744|Ga0307318_10012053All Organisms → cellular organisms → Bacteria → Terrabacteria group2767Open in IMG/M
3300028755|Ga0307316_10333205All Organisms → cellular organisms → Bacteria → Terrabacteria group557Open in IMG/M
3300028771|Ga0307320_10090381All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1158Open in IMG/M
3300028791|Ga0307290_10166184All Organisms → cellular organisms → Bacteria → Terrabacteria group808Open in IMG/M
3300028793|Ga0307299_10117742All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria996Open in IMG/M
3300028793|Ga0307299_10219297All Organisms → cellular organisms → Bacteria → Terrabacteria group715Open in IMG/M
3300028793|Ga0307299_10268532All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium641Open in IMG/M
3300028799|Ga0307284_10372721All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → unclassified Achromobacter → Achromobacter sp. Root83579Open in IMG/M
3300028807|Ga0307305_10162926All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1029Open in IMG/M
3300028810|Ga0307294_10267145All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium612Open in IMG/M
3300028811|Ga0307292_10414440All Organisms → cellular organisms → Bacteria → Terrabacteria group573Open in IMG/M
3300028824|Ga0307310_10107350All Organisms → cellular organisms → Bacteria1248Open in IMG/M
3300028824|Ga0307310_10545150All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium587Open in IMG/M
3300028828|Ga0307312_10362881All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium948Open in IMG/M
3300028876|Ga0307286_10064680All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora endolithica1254Open in IMG/M
3300028876|Ga0307286_10240766All Organisms → cellular organisms → Bacteria → Terrabacteria group661Open in IMG/M
3300028881|Ga0307277_10535838All Organisms → cellular organisms → Bacteria → Terrabacteria group526Open in IMG/M
3300028884|Ga0307308_10588120All Organisms → cellular organisms → Bacteria → Terrabacteria group534Open in IMG/M
3300028885|Ga0307304_10053337All Organisms → cellular organisms → Bacteria1504Open in IMG/M
3300030336|Ga0247826_11511557All Organisms → cellular organisms → Bacteria → Terrabacteria group545Open in IMG/M
3300031545|Ga0318541_10151450All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1273Open in IMG/M
3300031824|Ga0307413_11937011All Organisms → cellular organisms → Bacteria → Terrabacteria group530Open in IMG/M
3300031901|Ga0307406_10245996All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1344Open in IMG/M
3300032159|Ga0268251_10117348All Organisms → cellular organisms → Bacteria → Terrabacteria group969Open in IMG/M
3300032261|Ga0306920_104211136Not Available519Open in IMG/M
3300034268|Ga0372943_0426580All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria858Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil21.19%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil20.53%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil7.95%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment5.96%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.30%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil4.64%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.31%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost2.65%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.65%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.99%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.99%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.99%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.99%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.32%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.32%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.32%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.32%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.32%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.66%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.66%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand0.66%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.66%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.66%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.66%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.66%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.66%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.66%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.66%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.66%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.66%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.66%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.66%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.66%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.66%
AgaveHost-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave0.66%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000887Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-65cm-16A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001538Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005183Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005534Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1EnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005985Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009146Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015EnvironmentalOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009818Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012530Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)EnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300013772Permafrost microbial communities from Nunavut, Canada - A10_80_0.25MEnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018031Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1EnvironmentalOpen in IMG/M
3300018055Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coexEnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2EnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300019767Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 TEnvironmentalOpen in IMG/M
3300019867Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1EnvironmentalOpen in IMG/M
3300021078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redoEnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027957Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20 (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028673Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-BEnvironmentalOpen in IMG/M
3300028710Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380EnvironmentalOpen in IMG/M
3300028711Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150EnvironmentalOpen in IMG/M
3300028714Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196EnvironmentalOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028744Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367EnvironmentalOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028791Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028810Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151EnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028876Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031824Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2Host-AssociatedOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300032159Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)Host-AssociatedOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300034268Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
AL16A1W_1025522343300000887PermafrostVGEALSRQELEAVHCWEADDRVPGRPEMTAFRRRVRHHQSRWRESKGHPIGSQPIAPKPGGASRLVGSRLPLAYARETGANFITAGALDAARARTSIIEP
JGI10216J12902_10474277013300000956SoilMLTQHELEAAHCWEAEDRVPGRPGMTEFRRKVRYHQAQWREANGHPIGSHPIAPRDDKPSRPVGSRLPLAYAK
JGI10216J12902_11419466513300000956SoilVADSLSQEELEAAHCWEADDRVPRQPELTEFRRRLRYHQAQWREAQGHPIGSQPIAPRAGDRSARPVGSRLQLAYAKETG
A10PFW1_1055534113300001538PermafrostLSISRQELEAAHCWEADDQISQRPAMTQFRQMTRYHQAQWREANGHPIGSQPYAPRPGDKPARPVGSRIPLAYGRETGANFLT
Ga0062592_10150028713300004480SoilLAEPLEDVLSHAPHEPMIGSMAEAPSQEELEALNCWEPEDRVPARPAMTEFRRRLRCHQALWREANGHPIGSHPIVPRSEKPSRPVGSRLPL
Ga0066680_1048715413300005174SoilVGEIPSREELEAAHCWEADDEIPRRPAMTQFRRMTRYHQAKWREANGHPIGSQPIAPPDGARARPVGGRLPLDYARATGATFLTAGSLEAARARTSAIEPNQSIDHQRLWADLLWSPTLA
Ga0066685_1079521223300005180SoilMQRATRSTWPRRWAATKASVDVGEVLAREELEAAHCWEADDHVPRQPALTDFRRRLRYHQAQWREANGHPIGSQPIAPGEGTPSRPVGSRLPLDYARETGANFL
Ga0066678_1043045913300005181SoilVRCRTAPASTTNLVIGTPQLVHESGLYDVRVVVTFSEQELVAARCWEAEDRVPRRPELTEFRRTLRYHQAQWREANGHPIGSQPIAPKPGGAVRLVGSRLPLAYARETGATFLTAGALDAARARTSIIEPHQSFD
Ga0068993_1011831113300005183Natural And Restored WetlandsVADPTPGRTYDVDVSEVLTQQELEAAHCWEATDQVPGPPAMTAFRRGLRYHQAMWREANDHPIGTHPIRPRPGVPMRLVGSNLPLEYAKETGAS
Ga0066388_10111046813300005332Tropical Forest SoilMADEPTREELEAAHCWEAEDRVPRRPEMTAFRRRVRYRQALWREANGHPIGSQPIAPRPTDKSVRPVGSRLPLAYARETGATFITAGALAAVRARASVTERHQSFDHQRLWA
Ga0070682_10176642313300005337Corn RhizosphereMIGNMAKALSQEELEALHCWEPEDRVPGRPAMTEFRRGLRRHQALWREANGHPVGSHPIVPRSGKPSRSVGSRLPLD
Ga0070689_10200136223300005340Switchgrass RhizosphereVSEAPSREELEALYCWEAEDRVPGRPAMTELRRRLRLHQARWRDANRHPIGSQPIVPQRGKPSRPVGSRLPFDYARETGATFVTPGA
Ga0070674_10093919623300005356Miscanthus RhizosphereMIGNMAEALSQEELEALRCWEPEDRVPGRPAMTEFRRGLRRHQALWREANGHPVGSHPIVPRSGKPSRSVGSRLPLDY
Ga0070673_10081004633300005364Switchgrass RhizosphereVSEAPSREELEALYCWEAEDRVPGRPAMTELRRRLRLHQALWRDANRHPIGSQPIVPQRGKPSRPVGSRLPFDYARETGATFVTPGALDAARARTGMV
Ga0070698_10082301823300005471Corn, Switchgrass And Miscanthus RhizosphereMGKVLSKEELEAAHCWEADDRVPRRPEMTEFRRRLRYHQSQWREAQGHPIGSQPIAPKPGGAERPVGSRLPLAYARETGANFITVGAL
Ga0070698_10124129223300005471Corn, Switchgrass And Miscanthus RhizosphereVVEEVLSKEELEAAHCWEAEDRVPRRPELTEFRRRLRYHQAQWREAHGHPIGSQPLAPRPGNRRTRPVGSRMPLAYA
Ga0070699_10104591213300005518Corn, Switchgrass And Miscanthus RhizosphereMRQSPGRRLDGPDVGEIPSREELEAAHCWEADDEIPRRPAMTQFRRMTRYHQAKWREANGHPIGSQPIAPPDGARARPVGGRLPLDYARATGATFLTAGALD
Ga0070735_1008028513300005534Surface SoilMSNVTPVPGESPSRKELEALHCWEADDFVPGRPEMTDFRRRLRYHQAQWRERHGHPIGSQPIVQRAGAKPARPVGSRLPLDYA
Ga0070697_10034895113300005536Corn, Switchgrass And Miscanthus RhizosphereMRQSPGRRLDGPDVSEIPSREELEAAHCWEADDEIPRRPAMTQFRRMTRYHQAKWREANGHPIGSQPIAPPDGARARPVGGR
Ga0066695_1033435613300005553SoilMKKQLEAAYCWEADDQVPGRPQMTEFRRRMRYHQAQWREARGHPIGSQPIVPKRNGKPARPVGSRLPLEYARETGANFLTSGALEAARARTSVAE
Ga0066661_1010050523300005554SoilVAEVLSQEELEAAHCWEAEDRVPRRPELTEFRRTLRYHQAQWREANGHPIGSQPIAPKPGGAVRLVGSRLPLAYARETGATFLTAGALDAARARTSIIEPHQSFD
Ga0066692_1019602523300005555SoilMHPTLSKEELEAAHCWEADDRVPGRPEMTEFRRRLRYHQSRWREAQGHPVGSQPISPTPGGGAVRLVGSRLP
Ga0066694_1027387933300005574SoilMKKQLEAAYCWEADDQVPGRPQMTEFRRRLRYHQAQWREARGHPIGSQPIVPKRNGKPARPVGSRLPLEYARETGANLLTSGALEAARARTSVAEPHQS
Ga0066691_1084821823300005586SoilVAEVLSQEELEAAHCWEAEDRVPRRPELTEFRRRLRYHQSQWREAQGHPIGSQPIAPKPNGAAVRLVGSRLPLAYAEETGANFLTV
Ga0066654_1074746913300005587SoilMDVMKKQLEAAYCWEADDQVPGRPQMTEFRRRLRYHQAQWREARGHPIGSQPIVPKRNGKPARPVGSRL
Ga0066905_10089269213300005713Tropical Forest SoilMDEPSQQELEAANCWEAEDRVPGRPQMTAFRRRLRLHHARWRETHGHPIGSQPIVPRKGTATRPVGSRLPLPYAEETGA
Ga0081539_1036271513300005985Tabebuia Heterophylla RhizosphereMGEALSQEDLEAAHCWEADDRVPGRPGMTAFRRRVRYHQARWRAAKGHPIGSQPIVPRPGKPVRPAGSRLPLDYARKTGASFLNANALAAVRARTAVTEAHQSFDHQRLWADLLWSPALGFNLAGDLA
Ga0068871_10188959213300006358Miscanthus RhizosphereVAETPTREQLEAAHCWEADDRVPRRPEMTDFRRGVRYHQAQWREANGHPIGSQPYAPRPSGPPARPVGSRLPLAYATETGANLLTPNALGAARARTSFIEPHQSFDHQR
Ga0066658_1051318213300006794SoilVEEALSKEELEAAHCWEADDRVPRRPELTEFRRRLRYHQSKWREAHGHPIGSQPIAPPCDGAPARLVGSRMPLAYATETGAS
Ga0075420_10101698323300006853Populus RhizosphereVSDAPSQDVLEAAHCWEAEDRVPGRPTMTAFRRGLRYHHAQWREANGHPIGSQPIVPRAGKPSRPFGSRLPLDYARETGATFLTAGALEAARGRTSLIEPHQSFDRQR
Ga0099793_1019191813300007258Vadose Zone SoilVAEVLSREELEAAHCWEAEDRVPRRPELTEFRRSLRYHQSQWREAQGHPIGSQPIAPKAGGGAVRLVGSRLPLAYAKETGANFLTVPALDAAKTRT
Ga0066710_10378222713300009012Grasslands SoilMRVGLYDVRVVATLSEQELVAAHCWEAEDRVPRRPELTEFRRTLRYHQAQWREANGHPIGSQPIAPKPGGAVRLVGSRLPLAYARETGANL
Ga0066710_10378693833300009012Grasslands SoilLRSPAVTYDVHVGKVLSKEQLEAAHCSEADDRVPQRPEMTEFRRQLRYHQSQWREAQGHPIGSQPIAPKSGGGAVRLVGSRLPLAY
Ga0066710_10393505913300009012Grasslands SoilMGVDASLSKEELEAAHCWEPEDRVPRRPEMTEFRRRLRYHQSRWREAQGHPIGSQPIAPKPGGGAVRLVGSRLPLEYARETGANFLTAGAL
Ga0105091_1024985413300009146Freshwater SedimentLSATPSREDLEAAHAWERDDRVPRRPAMTDFRRRARLHQSRWRESNGHPIGSQPIAPKPGDRTRLVGSRLA
Ga0105242_1015461313300009176Miscanthus RhizosphereMIGNMAEALSQEELEALHCWEPEDRVPGRPAMTEFRRGLRRHQALWREANGHPVGSHPIVPRSGKPSRSVGSRLPLDYARATGASFLT
Ga0105072_106022023300009818Groundwater SandVGEVLSKEDLEAAHCWEADDRVPRRPEMTEFRRRLRYHQSQWREAQRHPIGSQPIAPKPNGGAVRLVGSRLPL
Ga0126315_1035342413300010038Serpentine SoilMDAGATLSRQELEAAHCWEADDHVPRRPAMTEFRRRLRYHQAQWREANGHPIGSQPIVPRPGGGPARPVGSRLPLDYATATGATFLTARALDAARARMS
Ga0126308_1002988013300010040Serpentine SoilMDAGATLSRQELEAAHCWEADDHVPRRPAMTEFRRRLRYHQAQWREANGHPIGSQPIVPRPGGGPARPVGSRLPLDYATATGATFLTARALDAARAR
Ga0126306_1130580123300010166Serpentine SoilVGATLTEEELAAACCWDADDHVPKRPAMTEFRRRLRYHQAQWREAHGHPIGSQPIAPRPGEGSGRPVGSRLSLAYAEETGANFLTAHALEAAKARTAYIE
Ga0134064_1016063733300010325Grasslands SoilMDVMKKQLEAAYCWEADDQVPGRPQMTEFRRRMRYHQAQWREARGHPIGSQPIVPKRNGKPARPVGSRLPLEYARETGANFLTSGA
Ga0126370_1023284613300010358Tropical Forest SoilVGATPTRQQLEAAHCWEADDRVPGRPAMTEFRRVLRYRQAAWRAAKGHPIGFQPLAPRAGEKRRRVGSRMPLSYARRSGANFITAGALAAATARMSVIEPHQSIDHQRL
Ga0105246_1092093823300011119Miscanthus RhizosphereMAPVTKEELEAAFCWEADDQVPRRPEMTAFRREARYHQAQWREANHHPIGSQPISPKAGDSNVRPVGSRLPLDYARDTGANFL
Ga0137391_1133918013300011270Vadose Zone SoilVVATLTEQELVAAHCWEAEDRVPRRPELTEFRRTLRYHQAQWREANGHPIGSQPIAPRPEGAPARPIGSRLPLAYAKETGANLLTAGALDAARARTSVVEPHQSFDHQRS
Ga0137393_1166479123300011271Vadose Zone SoilVVATLTEQELVAAHCWEAEDRVPRRPELTEFRRTLRYHQAQWREANGHPIGSQPIAPRPEGAPARPIGSRLPLAYAKETGANLLTAGALDAARARTSVVEPHQSFDHQRSGPTSCRRRRWPSTSSA
Ga0137388_1136121823300012189Vadose Zone SoilLIGLSKQELEAAHCWESEDRVPKRPDMTDFRRRLRCQQAQWRKAHGHPIGSQPIAPRAGEVRRPVGSRLPLAYARKTGANFLTAGALAAAR
Ga0137388_1179969423300012189Vadose Zone SoilVRLAEGRLYDADVAATLTKLELEAAHCWEADDQVPRRPEMTGFRRRLRYHQAQWRDANGHPIGSQPIAPRPDGGPARLVGSRLPLAYAR
Ga0137365_1013997913300012201Vadose Zone SoilVEDVLSKEELEALHCWEAEDHVPRRPELTEFRRRLRYHQAQWREANGYPIGSQPIAPRPDGGPARLVGSRLPLAYARETGANFLTGCALDAAGARTSIIEPHQSFDHQR
Ga0137380_1115576823300012206Vadose Zone SoilVSVALTRQELEAAHCWEADDLIRRRPAMTEFRQTTRYHHARWREANGHPIGSQPIAPRDDGKPVRLVGSRIPLAYGRETGASFLTDGALAAARARTSVIEPHQSVDQQRLWADLLSSE
Ga0137381_1070367713300012207Vadose Zone SoilVEDVLSKEELEALHCWEAEDHVPRRPELSEFRRRLRYHQAQWREANGYPIGSQPIAPRPDGGAARLVGSRLPLAYARETGANFLTGCALDAAGARTSIIEPHQSFDHQRLWADLL
Ga0137376_1038456733300012208Vadose Zone SoilVGEVLSKEELERAHCWEAEDRVPRQPARTEFRRRLRYHQPQWREANGYPIGSQPIAARSDGGSARLVGSRLPLVYARETGANFLNVRALDFAYATVEELVGGDVL
Ga0137376_1054983813300012208Vadose Zone SoilVAEVLSQGELEAAHCWEAEDRVPRRPELTEFRRRLRYHQSQWREAQGHPIGSQPIAPKPNRAAIRLVGSRLPLAYAEETGANFLTVPALEAAKARTALVEPHQSFDHQRLWAD
Ga0137379_1006537623300012209Vadose Zone SoilMSKVPSRKELEAAHCWEADDRVPGRPEMTDFRRRLRYHQSQWREAQGHPIGSQPIAPKPNRAARPVGSRLPLA*
Ga0137379_1051011713300012209Vadose Zone SoilVEDVLSKEELEALHCWEAEDHVPRRPELTEFRRRLRYHQAQWREANGYPIGSQPIAPRPDGGPARLVGSRLPLAYAKETGANFLT
Ga0137379_1061800013300012209Vadose Zone SoilMSEALSQEELEAVHCWEAEDRVPRRPELTEFRRRLRFQQAQWRAANGHPIGSQPIAPRPDGPARLVGSRLQLAYARETGANF
Ga0137378_1055161223300012210Vadose Zone SoilVSVALTRQELEAAHCWEADDLISRRPAMTEFRQTTRYHHARWREANGHPIGSQPIAPRDDGKPVRLVGSRIPLAYGRETGASLLTDGALAAARARTSVIEPHQSVDQQRLWADLLSSEAL
Ga0137378_1144966123300012210Vadose Zone SoilVAATLTRQELEAAHCWEADDRVPRRPEMTEFRRRLRYHQSQWREAQGYPIGSQPIAPKPNEGTVRLVGSRLPLAYARETGANFVTAGALEAARGRTSIIE
Ga0137377_1166981313300012211Vadose Zone SoilMGESPSKEELEAAHCWEADDRVPGRPELTAFRRQLRYHQSWWRESKDHPIGSQPIVPKPGAAARPVGSRLPLAYARETGANFLTAGALDAA
Ga0137372_1019984533300012350Vadose Zone SoilVADDEQLGEGRLYDVDVGEVLSKEELEAVHCWEAEDHVPRRPELTAFRRRLRYHQAQWREANGYPIGSQPIEPRPDGGPARLVGSRLPLAYAIETGVNLLTAHALDVASARKSIIERHQSFDHQRLWA
Ga0137372_1068619113300012350Vadose Zone SoilMEEAPLKQELEAARSWEPSDMVPGRPEMTAFRRRLRLLQSQWRESKGHPIGSQPIVPRPGSPFRLVGSRLPLDYARETGANFLRAGAL
Ga0137367_1076586923300012353Vadose Zone SoilMGEALSRQQLEAAHCWKADDRVPGRPEMTAFRRQVRHHQSRWREAKGHPIGSQPIAPKPGGRARLIGSRLPL
Ga0137366_1016094133300012354Vadose Zone SoilVADDEQLGEGRLYDVDVGEVLSKEELEAVHCWEAEDHVPRRPELTAFRRRLRYHQAQWREANGYPIGSQPIAPRPDGGPARLVGSRLPLAYAIETGVNLLTAHAFYLARARTSIIERHQSFDHQRLWADL
Ga0137369_1005340683300012355Vadose Zone SoilMGEALSRQQLEAAHCWKADDRVPGRPEMTAFRRQVRHHQSRWREAKGHPIGSQPIAPKPGGRARLIGSRLPLAYARETGANFL
Ga0137371_1002469573300012356Vadose Zone SoilMRDAPSRRELEALHAWEPADQVPGRPEMTAFRRQLRLHQSRWRESKGHPIGSQPIVPRDGTATRLVGSRLPLAYARETGANFLTPGALEAAKA*
Ga0137371_1103989823300012356Vadose Zone SoilVNEALSKDELEAAHCWEADDHVPRRPELTGFRRSLRYHQAQWREANGYPIGSQPIAPRPDGGQARPVGSRLQLAYARETGANFL
Ga0137375_1017689233300012360Vadose Zone SoilMGTALSRQELEAAHCWEADDRVPRRPAMTGFRRRLRYHQAQWREANRHPIGSQPIAPPPDGGPARPVGSRLPLAYAQETGANFVTAGALAAARTR
Ga0136635_1003581933300012530Polar Desert SandLASPVPLAAAYDLDVEEVLSKEALEAAHCREADDHVPQQPAMTGFRRRLRYHQSRWREAHGHPIGSQPIAPRPDDGPARPVGSRLPLAYAKEIGANFLTAHSLDA
Ga0137373_1027704113300012532Vadose Zone SoilLREALSKQELEAAHCWEADDQVPRRPAMTGFRRMLRYHQAQWREANGHPIGSQPIAPRPDGGAARLVGSRLQLAYARETGANFLTAR
Ga0137396_1019825423300012918Vadose Zone SoilVAEVLSQEELEAAHCWEAEDRVPRRPELTEFRRRLRYHQSQWREAQGHPIGSQPISPKPDGAAVRLVGSRLPLAYAKETGANFLTVPALEAAKTRTSIVEPHQSFDHQRLWA
Ga0137394_1043453333300012922Vadose Zone SoilVRVLSEEELKAAHCWEADDRVPGRPELTEFRRRLRYHQSQWREAQGHPIGSQPIAPKPGGGAVRLVGSRLPLAYARETGANFLTAGALEAARARTSITEPHQSF
Ga0137407_1233911623300012930Vadose Zone SoilMSTKTAGRPYDVDVAQILTNEDLEAAHCWEADDNVPRRPELTKFRRRLRYHQAQWREANGHPIGSQPIAPKPGGAVRPVGSRLQLAYAKETGANFLTAGPLDAARARTSIIEPHQSFDH
Ga0126375_1132357913300012948Tropical Forest SoilVTLYGLGMGSSPSREELEAAHCWEADDRVAGRPEMTAFRRVLRLHQSRWRDGEGHPIGSQPIVPRAGKRSRLVGSRL
Ga0134077_1008833433300012972Grasslands SoilMEALSQQELEAVHCWEADDRVPGRPEMTAFRRHLRYHQSRWRESKGHPIGSQPIVPKPGAAARLVGSRLPLAYARETGANFLTADALDAARARTSIIEPHQSFD
Ga0134087_1024921523300012977Grasslands SoilVAEVLSQEELEAAHCWEAEDRVPRRPELTEFRRRLRYHQSQWREAQGSPFGSQPIAPKPNGAAVRLVGSRLPLAYAEETGANFLTVPALEAAKARTAIV
Ga0164304_1027669123300012986SoilVNDVPTRQELEEASCWDPSDEVPGRPEMTAFRRGLRYHQAHWREQHGHPMGSQPYAPRPSDRSVRPVGSRIPLAYGRETGANLVTAGARAAARARTSVIEPAQSFDHQRLWAD
Ga0164307_1046696513300012987SoilMEAHLSREELEAAHCWEADDRVARRPDMTDFRRRLRYHQAKWREAHGHPIGSQPINPKPDSKAVRLVGSRLPLDYARETGANFLTAGA
Ga0164305_1006789913300012989SoilMEAHLSREELEAAHCWEADDRVARRPDMTDFRRRLRYHQAQWREAHGHPIGSQPINPKPDGKAVRLVGSRLPLDYARETGANFLTAGASDAANARLAAKEPHQSLDVQRV
Ga0157375_1325847623300013308Miscanthus RhizosphereVSEAPSREELEALYCWEAEDRVPGRPAMTELRRRLRLHQALWRDANRHPIGSQPIVPQRGKPSRPVGSRLPFDYARETGATFVTPGALDAARARTGMVEPHQSFDHQRL
Ga0120158_1034395623300013772PermafrostMLDVEEVPSKEELEAAHCWETEDHVPRRPELTEFRRRLRYHQAQWREANGYPIGSQPIAPRPDGGPGRLVGSRLPLTYARETGANFLTARAVDAARARTSIIDPH
Ga0120158_1035416123300013772PermafrostMGEALSKEKLEAAHCWEADDRVPGRPELTAFRRQLRYHQSQWRQAKGHPIGSQPIVPKPGAAARPVGSRLPLAYARETGANFLTAGALDAARARTSMVEPHQSFD
Ga0157380_1257855723300014326Switchgrass RhizosphereVTDATPTRAELEAACCWEADDRVPGRPAMTDFRRAARYHQSRWREAHGHPMGTQPIVPRPGARTRPVGSRLPLDHARATGATFV
Ga0137409_1112507213300015245Vadose Zone SoilVAEVLSQEELEAAHCWEAEDRVPRRPELTEFRRRLRYHQSQWREAQRHPIGSQPIAPKPNGAALRLVGSRLPLAYAKETGANFLTVPALDAAKARTLIVEPHQSFDHQRLWA
Ga0134089_1030980513300015358Grasslands SoilVATYDVDVGKVLSREELEAAHCWEADDRVPGRPQMTEFRRSQRYHQSRWREAQGHPIGSQPIAPKPGGAVRLVGSRLPLDYARETGANFLTAGSLDAAKARTSAKE
Ga0134085_1046862113300015359Grasslands SoilVGEVLSKEELEAAHCWEADDHVPQQPEMTAFRRRLRYHQAQWREAQGHPIGSQPIAPRPDGSGRLVGSRLPLAYARETGANF
Ga0132256_10013875013300015372Arabidopsis RhizosphereMIGNMVEALSQEELEALHCWEPEDRVPGRPAMTEVRRGLRRHQALWREANGHPVGSHPIVPRSGKPSRSVGSRLPLDYARTTGASFLTSGARDAARARTSFVEPHQSFDHQR
Ga0132257_10066389813300015373Arabidopsis RhizosphereVPASPSQAQLEAAHCWEADDVVPGRPAMTDYRRRVRYHQSQWREAHGHPIGSQPIVPRPGARVRPVGSRVPLDFGRDTGASLLTA
Ga0132257_10350333813300015373Arabidopsis RhizosphereMGARGVAALGWTLVLVEPSREELEAAHCWEANDLVPGRPAMTVFRRCTRYHQAQWREAHGHPTGTQPIVPRPGVTVRSIGSRVPLDYGRTTG
Ga0132255_10456714613300015374Arabidopsis RhizosphereVPASPSQEQLEAAHCWEADDVVPGRPAMTDYRRRVRYHQSQWREAHGHPIGSQPIVPRPGARVRPVGSRIPLDFGRETGASLLTAGALVAARERTAIAEP
Ga0134112_1008420333300017656Grasslands SoilLRSPAVTYDVHVGKVLSKEQLETANCWEADDRVPQRPEMTEFRRQLRYHQSQWREAQGHPIGSQPIAPKPGDGAVRLVGSR
Ga0134083_1014500823300017659Grasslands SoilMEALSQQELEAVHCWEADDRVPGRPELTAFRRQLRYHQSRWRESKGHPIGSQPIVPKPGAAARLVGSRLPLAYARETGA
Ga0184605_1010279133300018027Groundwater SedimentMDAGATLSRQELEAAHCWEAEDHVPRRPAVTQFRRRLRYHQAQWREANGHPIGSQPIVPRPGGGPARPVGSRLPLDYATETGATFLTARAL
Ga0184605_1042507013300018027Groundwater SedimentVGKVLSQEELEAAHCWEADDRVPGRPEMTEFRRRLRYHQSQWREAQGHPIGSQPIAPKRGGAVRLVGSRLPLDYARETGAN
Ga0184634_1046955813300018031Groundwater SedimentVEDILTQQELEAAHCWEAEDRVPGRPEMTEFRRRLRYHQAQWREANGYPIGSQPFAPRPDGGPARLVGSRLPLAWA
Ga0184616_1020910813300018055Groundwater SedimentMPCEPSGSQGSARISDDGSVATTLTKTELEAAHCWEADDHVPKKPELTAFRRALRYQQAQWREANGHAIGSQPIAPRPGGPTRPVGSRMPIDYANETGANFLTTEALVAARARTSF
Ga0184619_1012626813300018061Groundwater SedimentMDAGVTLSRQELEAAHCWEADDHVPRRPEVTEFRRRLRYHQAQWREANGHPIGSQPIVPRPGGGPARPVGSRLPLDYATATGAT
Ga0184619_1019003913300018061Groundwater SedimentMHLADDQQLAEEGRLYDADVEDVLSKEELEALHCWEAEDQVPRRPEMTEFRRRLRHHQAQWREANGYPIGSQPIAPRPEVGPARLVGSRLPLAWARETGANLLTAHALDAARARTSIIEPHQSFDHQRLW
Ga0184619_1052106013300018061Groundwater SedimentVAAILTREELEAAHCWEAEDNVPRRPELTEFRRRLRYHQAQWREANRYPIGSQPIAPRPDGGPEGLVGSRLPLAWARETGANLLTANAL
Ga0184609_1031594523300018076Groundwater SedimentVTRGANMEDVLSEEELEALHCWQAEDHVPRRPEMTEFRRRLRYHQAQWREANGYPIGSQPIAPRPEVGPTRLVVSRLSLAYARETGAN
Ga0184639_1065676423300018082Groundwater SedimentVLTGAPEVCNDLEMGEALSRQELEAAHCWQADDRVPGRPGMTEFRQRVRYHQAQWRESMGHPIGSQPIVPRRGQPARPVGSRLPLDYARETGANFLTAAAVDAARTRTSLTEP
Ga0190272_1174771613300018429SoilVTLYLYDYRAYGADMVEALTEQELEGAHCWEATDRVPRRPAMTEFRRRLRYHQAMWREASGHPVGTHPILPKPGGMTRLVGSRLPLDY
Ga0066667_1017658513300018433Grasslands SoilLRSPAVTYDVHVGKVLSKEQLEAAHCWEADDRVPQRPEMTEFRRRLRYHQSQWREAQGHPIGSQPIAPKSGGGAVRLVGSRLPLAY
Ga0066667_1072964613300018433Grasslands SoilVAEVLSQEELEAAHCWEAEDRVPRRPELTEFRRRLRYHQSQWREAQGHPLGSQPIAPKPNGGAVRLVGSRLPLAYAQETGANFLTV
Ga0066667_1138028223300018433Grasslands SoilLISTLRHGRCQATAYDADVGEVLSREELEAAHCWEPEDHVPRRPELTEFRRRLRYHQAQWRESIRHPIGSQPIAPKPGGAVRPVGSRLQLAYGRETRANFLTAGALDARKARPSTIEPHRSADHHRHWP
Ga0066662_1260603423300018468Grasslands SoilVGKVLSKEELEAAHCWEAEDRVSGRPEMTEFRRRLRYHQSQWREAQGHPIGSQPIAPKPGGGKVRLVGSRLPLAYARETGANFLTAAALDAAKARTSVREPHQSFD
Ga0190274_1156106213300018476SoilVAATLTKPELEAAHCWEADDYVPKRPELTAFRRALRYHQAQWREANGHPLGSQPIAPRPDGQTRPVGSRLPIDYAHETG
Ga0190274_1325803823300018476SoilVATDLPRERLEAAHCWAADDQVPGRPGMTDFRRRTRYHHAQWREANGHPIGSQPIVPKPGARVRLVGSRIALDYARETGANFL
Ga0190267_1085400723300019767SoilMDAGVTLSRQELEAAHRWEADDHVPRRPEVTEFRRRLRYHQAQWREANGHPIGSQPFVPRPGAAPARPVGSRLPLDYATATGATFLTARALEAARA
Ga0193704_107919923300019867SoilVALLDAAATSAAPYNLGMGEAPSQQELQAAYCWEADDEVSRRPAMTEFRRSLRYHQAQWREANGHPIGSQPIVPRPHGKPARPVGSRLPLAYARETGANFLTANALEAA
Ga0210381_1027170513300021078Groundwater SedimentMPVEPSREELEAAHCWEADDRVASRPAMTAFRRRARYHQSQWREAHGHPICTQPIVPRPGVAVRPAGSRV
Ga0207684_1079096413300025910Corn, Switchgrass And Miscanthus RhizosphereMRQSPGRRLDGPDVSEIPSREELEAAHCWEADDEIPRRPAMTQFRRMTRYHQAKWREANGHPIGSQPIAPPDGARARPVGGRLPLDYARATGATFLTAGALDAARARTSAIEPNQSI
Ga0207659_1100263423300025926Miscanthus RhizosphereMIGNMAEALSQEELEALRCWEPEDRVPGRPAMTEFRRGLRRHQALWREANGHPVGSHPIVPRSGKPSRSVGSRLPLDYARATGASFLTPEAR
Ga0207686_1014765423300025934Miscanthus RhizosphereMIGNMAEALSQEELEALHCWEPEDRVPGRPAMTEFRRGLRRHQALWREANGHPVGSHPIVPRSGKPSRSVGSRLPLDYARKTGASLSKR
Ga0207709_1135651013300025935Miscanthus RhizosphereVAAEFTRQELERAYCWEADDNVPRQPAMTEFRRGLRYHQATWREANGHPIGSQPIAPRPGGATRPVGSRLPIDYAKETGANFVTTEALDAAKARTS
Ga0207651_1134817713300025960Switchgrass RhizosphereMIGNMAEALSQEELEALHCWEPEDRVPGRPAMTEFRRGLRRHQALWREANGHPVGSHPIVPRSGKPSRSVGSRLP
Ga0209238_118366713300026301Grasslands SoilVAEVLSQEELEAAHCWEAEDRVPRRPELTEFRRRLRYHQSQWREAQGHPLGSQPIAPKPNGGAVRLVGSRLPLAYAQETGANFLT
Ga0209180_1042205523300027846Vadose Zone SoilVAAILTREELEAANCWEAEDQVPRRPELTEFRRRLRYHQAQWREANGHPIGSQPIAPRRNAGPARLVGSRLQLT
Ga0209590_1027920323300027882Vadose Zone SoilMSELDMGEVLSKEELEAAHCWEADDRVPGRPEMTEFRRRLRYRQSQWREAGGHPIGSQPIAPKPGGRAVRLAGSRLPLAYARETGANFLTA
Ga0209857_104160123300027957Groundwater SandMGTALSRQELEAAHCWEADDRVPRRPAMTEFRRRLRYHQAQWRAANRHPIGSQPIAPPPDGGPARLIGSRLPLAYAKQTGANFLT
Ga0268266_1130903633300028379Switchgrass RhizosphereDSAVPTQRELEAAFCWDREDEVPSRPEMTTFRRRYRLHQAMWRQRHGHPIGSQPIVPKGKPFRPVGSRLPLDYARETGAGRPAAPTSRR
Ga0257175_107711923300028673SoilLTGLSKQELEAAHCWESEDRVPKRPDMTEFRRRLRYHQAQWREAHGHPIGSQPIAPRTGEVRRPVGSRLPLAYARKTGAN
Ga0307322_1017779523300028710SoilMDAALSRQVLEAAHCWEAEDQVRRPAVTEFRRRLRYHQAQWREANGHPIGSQPIAPRPHGKPARPVGSRLPLAYARETGANFLTASAL
Ga0307293_1017886713300028711SoilMGEAPSQQELQAAYCWEADDEVPRRPAMTELRRRLRYHQAQWREANGHPIGSQPIVPRPHGKPARPVGSRLPLAYARETGANFLTANALEAARARTAITEPHQSFDHQ
Ga0307309_1021010123300028714SoilMTTRPPPGAAGNPAEGRLYDVDVEGVLSREELEAAHCWEADDHVPRCPEMTEFRRRLRYHQAQWREAHGHPIGSQPIAPRPDGKPARLVG
Ga0307307_1020954313300028718SoilVIVEDVLSKEELEAMHCWEAEDNVPRRPDLTAFRRRLRYHQAQWREANGHPIGSQPIAPRADGAPPRPVGSRLPLAYARE
Ga0307301_1008284223300028719SoilMDAGVTLSRQELEAAHCWEADDHVPRRPEVTEFRRRLRYHQAQWREANGHPIGSQPIVPRPGGGPARPVGSRLPLDYATATGATFLTARA
Ga0307318_1001205333300028744SoilMDAGVTLSRQELEAAHCWEADDHVPRRPDVTEFRRRLRYHQAQWREANEHPIGSQPIVPRPGGGPARPVGSRLPLDYATASGATFLT
Ga0307316_1033320513300028755SoilMDAGVTLSRQELEAAHCWEADDHVPRRPDVTEFRRRLRYHQAQWREANEHPIGSQPIVPRPGGGPARPVGSRLPLDYATASGATFLTARALDAARARTSVVEPHQSFDHQRLWADL
Ga0307320_1009038113300028771SoilMKSSAYNLDMGEAPSQQELQAAYCWEADDELPRRPAMTEFRRRLRYHQAQWREANGHPIGSQPIAPRPHGKPARPVGSRLPLAYARETGANFLTANALE
Ga0307290_1016618413300028791SoilMDAGVTLSRQELEAAHCWEADDHVPRRPEVTEFRRRLRYHQAQWREANGHPIGSQPIVPRPGGGPARPVGSRLPLDYATATGATFLTARALDAARARTSVV
Ga0307299_1011774233300028793SoilMGEDLTRQELEAAHCWEADDLVPRRPAMTEFRRRLRFQQAQWREANAHPIGSQPISPRPDSRPARLVGSRLPLDYAR
Ga0307299_1021929713300028793SoilMDAGVTLSRQELEAAHCWEADDHVPRRPDVTEFRRRLRYHQAQWREANEHPIGSQPIVPRPGGGPARPVGSRLPLDYATATGATFLTAPALDAARARTSAVEPHQSFDHQRLW
Ga0307299_1026853213300028793SoilVAAILTKEELEAAHCWEADDNVPRRPELTEFRRRLRYHQAQWREANGHPIGSQPMAPKASGAARPVGSRLQLAYAR
Ga0307284_1037272113300028799SoilMGDAPSKEELEAAHCWEADDRVPGRPELTAFRRQLRYHQSRWRESKGHPIGSQPIAPKPGGAARPVGSRLPLAYARET
Ga0307305_1016292613300028807SoilMGEALSKHELEAVHCWEADDRVPGQPELTAFRRQLRYHQSRWRESKAHPIGSQPIAPKPGGAARLVGSRLPPAYAQETGANFLTARALDAARARTSIIEPHQSFDH
Ga0307294_1026714513300028810SoilVGAQRLTRDELEAAHCWEADDRVPARPAMTEFRRRLRYHQAQWRESNGHPIGSQPIAPKAGAKARSVGSRLPFAYARETGANFIT
Ga0307292_1041444023300028811SoilVAAILTKEELEAAHCWEADDNVPRRPELTEFRRRLRYHQAQWREANGHPIGSQPMAPKASGAARPVGSRLQLAYARETGANFLTAGALDAAKARTSIIEPHQSF
Ga0307310_1010735023300028824SoilMRNRDRTLAQLYDPDVAATPTREELEAAHCWEAEDHVARRPELTAFRRRLRYHQAQWRERNGHPIGSQPIAPRPGDGPARLVGSRLPLDYARETGASFLTAAALDAVRA
Ga0307310_1054515013300028824SoilVAAILTREELEAAHCWEADDSVPRRPELTEFRRRLRYHQAQWREANGHPIGSQPMVPKAGGAARPVGSRLQLAYARETGANLLTAGALDAAKA
Ga0307312_1036288123300028828SoilVAAILTKEELEAAHCWEADDNVPRRPELTEFRRKLRYHQAQWREANGHPIGSQPMAPKASGAARPVGSRLQLAYARETGANFLTAGALDAAKART
Ga0307286_1006468013300028876SoilMDAGVTLSRQELEAAHCWEADDHVPRRPEVTEFRRRLRYHQAQWREANGHPIGSQPIVPRPGGGPARPVGSRLPLDYATA
Ga0307286_1024076623300028876SoilMDAGVTLSRQELEAAHCWEADDHVPRRPDVTEFRRRLRYHQAQWREANEHPIGSQPIVPRPGGGPARPVGSRLPLDYATASGATFLTARALDAARARTS
Ga0307277_1053583813300028881SoilMGEAPSRQELEAAFCWEADDEVPRRPAMTEFRRRLRYHQAQWREANGHPIGSQPIAPRPHGKPARPVGSRLPLAYARETGANFLTA
Ga0307308_1058812023300028884SoilMSTKTAGRPYDVDVAAILTKEELEAAHCWEADDNVPRRPELTEFRRRLRYHQAQWREANGHPIGSQPMAPKAGGAVRPVGSRLQLAYAKETGANFFTAGALDAARARTSIIEPHQSFD
Ga0307304_1005333743300028885SoilMGEAPSQQELQAAYCWEADDEVSRRPAMTEFRRSLRYHQAQWREANGHPIGSQPMLPRPHGKPARPVGSRLPLAYARETGANFLTANALEAARARTA
Ga0247826_1151155723300030336SoilMHCWEADDRVSGQPDLTAFRRRLRYKQALWREAHGHPIGFQPIAPRPDGKPARPVGSRLPLPYARGTGATFLT
Ga0318541_1015145033300031545SoilVVRAPSRAELEAAHCWEADDRVPRDPAMTAFRRAVRYHQAQWREARGHPTGTQPIAPRAGDDRVRLVGSRMPLDYARATGANFMTPASRRAATE
Ga0307413_1193701123300031824RhizosphereMKARRRRRSAPYNLDMGEALSRQELEAAHCWEADDQVPRRPAMTGFRRRLRYHQARWRAANGHPIGSQPIAPRPNGGPARLVGSRLPLAYAKETGANFLTAGALEAARAR
Ga0307406_1024599613300031901RhizosphereMDAGATLSRQELEAAHCWEADDHVPRRPAMTEFRRRLRYHQAQWREANGHPIGSQPIVPRPGGGPARPVGSRLPLDYATATGATFLTARALDAARA
Ga0268251_1011734823300032159AgaveMAEALSQEELAAAHCWEAEDRVPGRPGMTEFRRALRYHQAQWREANGHPIGSQPIVPRKGKPSRPVGSRVPLDYAKETGANFL
Ga0306920_10421113613300032261SoilMAEVPSQHKLEAARCWEADDRVPGRPDMTEFRRRLRYHQARWRVANGYPIGWQPIAPRPHDSARTVGSRLPLD
Ga0372943_0426580_2_2983300034268SoilMSELPSRQELEAAHCWENDDNVPKQPATTAFRRMLRYHQARWRAANGHPIGSQPIAPRPHDTKVRPVGNRLPLAYAKETGATFVTSNALAAAQARTSFV

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.