Metagenome / Metatranscriptome Family F046524

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F046524
Family Type	Metagenome / Metatranscriptome
Number of Sequences	151
Average Sequence Length	75 residues
Representative Sequence	MTNSEQQIDQLRRRLGWEAGGPLGQISTQATDTVVSILSAAVSWVRQSGEQHPLISVLLAFQAGFALGRWGGRRA
Number of Associated Samples	97
Number of Associated Scaffolds	151

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.47 %
% of genes near scaffold ends (potentially truncated)	29.14 %
% of genes from short scaffolds (< 2000 bps)	92.72 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (80.132 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (18.543 % of family members)
Environment Ontology (ENVO)	Unclassified (31.126 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (70.199 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.31% β-sheet: 0.00% Coil/Unstructured: 43.69%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 151 Family Scaffolds
PF03631	Virul_fac_BrkB	45.70
PF00072	Response_reg	1.32
PF02615	Ldh_2	0.66
PF01695	IstB_IS21	0.66
PF04392	ABC_sub_bind	0.66
PF00857	Isochorismatase	0.66
PF00872	Transposase_mut	0.66
PF04796	RepA_C	0.66
PF13628	DUF4142	0.66
PF05974	DUF892	0.66

COG ID	Name	Functional Category	% Frequency in 151 Family Scaffolds
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	45.70
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.66
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.66
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.66
COG2055	Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family	Energy production and conversion [C]	0.66
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.66
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.66
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.13 %
Unclassified	root	N/A	19.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.13 %
Unclassified	root	N/A	19.87 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.13 %
Unclassified	root	N/A	19.87 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	78.15 %
Unclassified	root	N/A	19.87 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	38.41 %
Unclassified	root	N/A	19.87 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	30.46 %
Unclassified	root	N/A	19.87 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.66 %

Name	Rank	Taxonomy	Distribution
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	26.49 %
Unclassified	root	N/A	19.87 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	3.31 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.66 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales bacterium 69-11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	26.49 %
Unclassified	root	N/A	19.87 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	1.32 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459021\|G14TP7Y01A4JB0	Not Available	697	Open in IMG/M
2228664022\|INPgaii200_c0692950	Not Available	502	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100746100	All Organisms → cellular organisms → Bacteria → Proteobacteria	567	Open in IMG/M
3300001686\|C688J18823_11037900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	520	Open in IMG/M
3300002568\|C688J35102_120103572	All Organisms → cellular organisms → Bacteria → Proteobacteria	881	Open in IMG/M
3300002568\|C688J35102_120108124	Not Available	883	Open in IMG/M
3300002568\|C688J35102_120143760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	898	Open in IMG/M
3300004081\|Ga0063454_101215096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	625	Open in IMG/M
3300004153\|Ga0063455_101474087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	529	Open in IMG/M
3300004479\|Ga0062595_102447971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	519	Open in IMG/M
3300005329\|Ga0070683_100845077	All Organisms → cellular organisms → Bacteria → Proteobacteria	878	Open in IMG/M
3300005329\|Ga0070683_101731342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	601	Open in IMG/M
3300005331\|Ga0070670_100506419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	1074	Open in IMG/M
3300005338\|Ga0068868_100254980	All Organisms → cellular organisms → Bacteria → Proteobacteria	1477	Open in IMG/M
3300005341\|Ga0070691_10395258	All Organisms → cellular organisms → Bacteria → Proteobacteria	778	Open in IMG/M
3300005365\|Ga0070688_101676271	Not Available	520	Open in IMG/M
3300005366\|Ga0070659_101958189	All Organisms → cellular organisms → Bacteria → Proteobacteria	526	Open in IMG/M
3300005434\|Ga0070709_11737680	All Organisms → cellular organisms → Bacteria → Proteobacteria	510	Open in IMG/M
3300005435\|Ga0070714_100208922	All Organisms → cellular organisms → Bacteria → Proteobacteria	1789	Open in IMG/M
3300005435\|Ga0070714_100239732	All Organisms → cellular organisms → Bacteria → Proteobacteria	1673	Open in IMG/M
3300005435\|Ga0070714_100845284	All Organisms → cellular organisms → Bacteria → Proteobacteria	887	Open in IMG/M
3300005435\|Ga0070714_100981426	All Organisms → cellular organisms → Bacteria → Proteobacteria	822	Open in IMG/M
3300005436\|Ga0070713_100124952	All Organisms → cellular organisms → Bacteria → Proteobacteria	2261	Open in IMG/M
3300005436\|Ga0070713_100431679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1235	Open in IMG/M
3300005436\|Ga0070713_100521503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	1123	Open in IMG/M
3300005436\|Ga0070713_101329591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	696	Open in IMG/M
3300005436\|Ga0070713_101742798	All Organisms → cellular organisms → Bacteria → Proteobacteria	605	Open in IMG/M
3300005437\|Ga0070710_10462780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	862	Open in IMG/M
3300005439\|Ga0070711_101973744	Not Available	513	Open in IMG/M
3300005441\|Ga0070700_100776488	All Organisms → cellular organisms → Bacteria → Proteobacteria	769	Open in IMG/M
3300005457\|Ga0070662_100637459	All Organisms → cellular organisms → Bacteria → Proteobacteria	898	Open in IMG/M
3300005535\|Ga0070684_100552453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1069	Open in IMG/M
3300005535\|Ga0070684_100639737	All Organisms → cellular organisms → Bacteria → Proteobacteria	990	Open in IMG/M
3300005535\|Ga0070684_100648028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	983	Open in IMG/M
3300005539\|Ga0068853_101708907	All Organisms → cellular organisms → Bacteria → Proteobacteria	610	Open in IMG/M
3300005564\|Ga0070664_100800980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	881	Open in IMG/M
3300005564\|Ga0070664_102219921	Not Available	521	Open in IMG/M
3300005577\|Ga0068857_100291995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1501	Open in IMG/M
3300005718\|Ga0068866_10803789	All Organisms → cellular organisms → Bacteria → Proteobacteria	654	Open in IMG/M
3300005842\|Ga0068858_100813746	All Organisms → cellular organisms → Bacteria → Proteobacteria	912	Open in IMG/M
3300006028\|Ga0070717_10191292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1788	Open in IMG/M
3300006028\|Ga0070717_10206326	All Organisms → cellular organisms → Bacteria	1723	Open in IMG/M
3300006028\|Ga0070717_10312348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	1399	Open in IMG/M
3300006028\|Ga0070717_10595929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1002	Open in IMG/M
3300006028\|Ga0070717_10810753	Not Available	852	Open in IMG/M
3300006028\|Ga0070717_11761125	Not Available	560	Open in IMG/M
3300006175\|Ga0070712_100148723	All Organisms → cellular organisms → Bacteria → Proteobacteria	1796	Open in IMG/M
3300006358\|Ga0068871_102210554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	524	Open in IMG/M
3300006755\|Ga0079222_10370581	All Organisms → cellular organisms → Bacteria → Proteobacteria	979	Open in IMG/M
3300006755\|Ga0079222_11607925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	617	Open in IMG/M
3300006804\|Ga0079221_10546919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	765	Open in IMG/M
3300006804\|Ga0079221_11662220	All Organisms → cellular organisms → Bacteria → Proteobacteria	519	Open in IMG/M
3300006806\|Ga0079220_10514702	All Organisms → cellular organisms → Bacteria → Proteobacteria	823	Open in IMG/M
3300006806\|Ga0079220_10668647	All Organisms → cellular organisms → Bacteria → Proteobacteria	755	Open in IMG/M
3300006806\|Ga0079220_10812965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	709	Open in IMG/M
3300006806\|Ga0079220_11233799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	620	Open in IMG/M
3300006806\|Ga0079220_11855155	Not Available	533	Open in IMG/M
3300006881\|Ga0068865_100821330	Not Available	803	Open in IMG/M
3300006903\|Ga0075426_11065644	All Organisms → cellular organisms → Bacteria → Proteobacteria	612	Open in IMG/M
3300006954\|Ga0079219_11700364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	584	Open in IMG/M
3300009098\|Ga0105245_10725167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	1029	Open in IMG/M
3300009156\|Ga0111538_10907816	Not Available	1115	Open in IMG/M
3300009177\|Ga0105248_12787517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	557	Open in IMG/M
3300009545\|Ga0105237_11684546	All Organisms → cellular organisms → Bacteria → Proteobacteria	641	Open in IMG/M
3300010373\|Ga0134128_10594262	All Organisms → cellular organisms → Bacteria → Proteobacteria	1232	Open in IMG/M
3300010373\|Ga0134128_11153397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	855	Open in IMG/M
3300010373\|Ga0134128_11380744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	776	Open in IMG/M
3300010373\|Ga0134128_11911681	Not Available	653	Open in IMG/M
3300010375\|Ga0105239_10222075	All Organisms → cellular organisms → Bacteria → Proteobacteria	2119	Open in IMG/M
3300010375\|Ga0105239_10799415	All Organisms → cellular organisms → Bacteria → Proteobacteria	1081	Open in IMG/M
3300010375\|Ga0105239_12661737	All Organisms → cellular organisms → Bacteria → Proteobacteria	583	Open in IMG/M
3300010396\|Ga0134126_11448372	All Organisms → cellular organisms → Bacteria → Proteobacteria	758	Open in IMG/M
3300010396\|Ga0134126_12441429	Not Available	569	Open in IMG/M
3300010401\|Ga0134121_11484667	All Organisms → cellular organisms → Bacteria → Proteobacteria	692	Open in IMG/M
3300010401\|Ga0134121_12368130	All Organisms → cellular organisms → Bacteria → Proteobacteria	571	Open in IMG/M
3300011119\|Ga0105246_10644053	All Organisms → cellular organisms → Bacteria → Proteobacteria	922	Open in IMG/M
3300012212\|Ga0150985_115893164	All Organisms → cellular organisms → Bacteria	2706	Open in IMG/M
3300012212\|Ga0150985_117750021	All Organisms → cellular organisms → Bacteria → Proteobacteria	1624	Open in IMG/M
3300012212\|Ga0150985_122602660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	896	Open in IMG/M
3300012469\|Ga0150984_105452892	All Organisms → cellular organisms → Bacteria → Proteobacteria	1188	Open in IMG/M
3300012469\|Ga0150984_118712560	All Organisms → cellular organisms → Bacteria → Proteobacteria	2615	Open in IMG/M
3300012469\|Ga0150984_123494699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3150	Open in IMG/M
3300012915\|Ga0157302_10072751	All Organisms → cellular organisms → Bacteria → Proteobacteria	1024	Open in IMG/M
3300012951\|Ga0164300_10157897	All Organisms → cellular organisms → Bacteria → Proteobacteria	1070	Open in IMG/M
3300012955\|Ga0164298_11195681	Not Available	576	Open in IMG/M
3300012960\|Ga0164301_10756774	Not Available	738	Open in IMG/M
3300012961\|Ga0164302_10888306	All Organisms → cellular organisms → Bacteria → Proteobacteria	683	Open in IMG/M
3300012961\|Ga0164302_11436167	Not Available	565	Open in IMG/M
3300012984\|Ga0164309_11338767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	607	Open in IMG/M
3300012985\|Ga0164308_10508784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1009	Open in IMG/M
3300012989\|Ga0164305_11237813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	649	Open in IMG/M
3300013102\|Ga0157371_11068512	All Organisms → cellular organisms → Bacteria → Proteobacteria	618	Open in IMG/M
3300013296\|Ga0157374_10079915	All Organisms → cellular organisms → Bacteria → Proteobacteria	3099	Open in IMG/M
3300013296\|Ga0157374_10343618	All Organisms → cellular organisms → Bacteria → Proteobacteria	1482	Open in IMG/M
3300013296\|Ga0157374_11186040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	785	Open in IMG/M
3300013296\|Ga0157374_11537140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	689	Open in IMG/M
3300013297\|Ga0157378_11809386	All Organisms → cellular organisms → Bacteria → Proteobacteria	659	Open in IMG/M
3300013306\|Ga0163162_12673825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	574	Open in IMG/M
3300013306\|Ga0163162_12985114	All Organisms → cellular organisms → Bacteria → Proteobacteria	544	Open in IMG/M
3300013307\|Ga0157372_11102804	All Organisms → cellular organisms → Bacteria → Proteobacteria	918	Open in IMG/M
3300013308\|Ga0157375_11619233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	766	Open in IMG/M
3300014325\|Ga0163163_10390021	All Organisms → cellular organisms → Bacteria → Proteobacteria	1450	Open in IMG/M
3300014497\|Ga0182008_10117729	All Organisms → cellular organisms → Bacteria → Proteobacteria	1319	Open in IMG/M
3300014497\|Ga0182008_10162134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1126	Open in IMG/M
3300014497\|Ga0182008_10433204	Not Available	712	Open in IMG/M
3300014745\|Ga0157377_10108491	All Organisms → cellular organisms → Bacteria → Proteobacteria	1665	Open in IMG/M
3300014745\|Ga0157377_10360839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	978	Open in IMG/M
3300014968\|Ga0157379_11188111	Not Available	733	Open in IMG/M
3300015265\|Ga0182005_1286502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	517	Open in IMG/M
3300015371\|Ga0132258_12502365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	1291	Open in IMG/M
3300015372\|Ga0132256_101232245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	861	Open in IMG/M
3300015373\|Ga0132257_101829958	Not Available	780	Open in IMG/M
3300015374\|Ga0132255_102428331	All Organisms → cellular organisms → Bacteria → Proteobacteria	800	Open in IMG/M
3300016445\|Ga0182038_11840128	All Organisms → cellular organisms → Bacteria → Proteobacteria	547	Open in IMG/M
3300020081\|Ga0206354_11138025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	837	Open in IMG/M
3300020610\|Ga0154015_1010001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	519	Open in IMG/M
3300022467\|Ga0224712_10631286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	524	Open in IMG/M
3300025898\|Ga0207692_10190458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1200	Open in IMG/M
3300025898\|Ga0207692_11114265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	523	Open in IMG/M
3300025901\|Ga0207688_10518241	All Organisms → cellular organisms → Bacteria → Proteobacteria	748	Open in IMG/M
3300025901\|Ga0207688_10923413	Not Available	552	Open in IMG/M
3300025901\|Ga0207688_11020579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	523	Open in IMG/M
3300025906\|Ga0207699_10990508	Not Available	621	Open in IMG/M
3300025914\|Ga0207671_10658045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	834	Open in IMG/M
3300025915\|Ga0207693_10029038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	4371	Open in IMG/M
3300025915\|Ga0207693_10306631	All Organisms → cellular organisms → Bacteria → Proteobacteria	1243	Open in IMG/M
3300025916\|Ga0207663_11186712	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300025916\|Ga0207663_11733181	All Organisms → cellular organisms → Bacteria → Proteobacteria	502	Open in IMG/M
3300025927\|Ga0207687_10896334	All Organisms → cellular organisms → Bacteria → Proteobacteria	759	Open in IMG/M
3300025928\|Ga0207700_10398336	Not Available	1206	Open in IMG/M
3300025928\|Ga0207700_10780141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	854	Open in IMG/M
3300025928\|Ga0207700_10794058	All Organisms → cellular organisms → Bacteria → Proteobacteria	847	Open in IMG/M
3300025928\|Ga0207700_11891763	Not Available	523	Open in IMG/M
3300025929\|Ga0207664_11243501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	663	Open in IMG/M
3300025944\|Ga0207661_10986388	All Organisms → cellular organisms → Bacteria → Proteobacteria	776	Open in IMG/M
3300025944\|Ga0207661_12153226	Not Available	504	Open in IMG/M
3300025945\|Ga0207679_10789041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	865	Open in IMG/M
3300026078\|Ga0207702_10721752	All Organisms → cellular organisms → Bacteria → Proteobacteria	983	Open in IMG/M
3300026095\|Ga0207676_10772613	Not Available	936	Open in IMG/M
3300026116\|Ga0207674_12169022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	519	Open in IMG/M
3300026142\|Ga0207698_11055528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	824	Open in IMG/M
3300031039\|Ga0102760_10928631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	672	Open in IMG/M
3300031938\|Ga0308175_100265314	All Organisms → cellular organisms → Bacteria → Proteobacteria	1732	Open in IMG/M
3300031939\|Ga0308174_11355276	Not Available	609	Open in IMG/M
3300031996\|Ga0308176_11254409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	787	Open in IMG/M
3300031996\|Ga0308176_12865969	All Organisms → cellular organisms → Bacteria → Proteobacteria	512	Open in IMG/M
3300032074\|Ga0308173_10794914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	870	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	58.94%
Host-Associated	Host-Associated	40.40%
Engineered	Engineered	0.66%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.94%
Plants	Host-Associated → Plants	40.40%
Solid Waste	Engineered → Solid Waste	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.91%
Roots	Host-Associated → Plants → Roots	1.32%
Grass	Engineered → Solid Waste → Grass	0.66%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	31.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	27.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.54%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.97%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.32%
Composting	Engineered → Solid Waste → Grass → Composting	0.66%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	27.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.54%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.62%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.97%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.31%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.32%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.32%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.32%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	18.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	7.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.30%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.30%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.64%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	3.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.99%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.99%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.99%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.32%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.32%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.32%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.66%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.66%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459021	Litter degradation NP4	Engineered	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020610	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031039	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 6C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4NP_02388560	2170459021	Switchgrass, Maize And Mischanthus Litter	MTGSEQQIDQLRRRLGWEAGGPLGQISTQATDTAVSILSAVVSWVRQSGEQHPLISILLAFQAGFALGRWGGRRA
INPgaii200_06929502	2228664022	Soil	RWAQVEIRETPMTNSEQQIDQLHRRLGWEAGGPLGQISTQATDTVVSILSAAVSWVRQSGEQHPLISVLFVFQAGFALGRWGGGHA
INPhiseqgaiiFebDRAFT_1007461002	3300000364	Soil	MTNGEQXIDXXRRRLGWEXGGPXGXISTQATDTVVSILSAAVSWVRQSGEQHPLISVLFVFQAGFALGRWGGGRA*
C688J18823_110379001	3300001686	Soil	GWEAGGPLGQISSQATDTVVSILGSAVSWMRQSGEEHPLISILLAFQAGFALGRWGGRRA
C688J35102_1201035721	3300002568	Soil	MTNSEQQIDQLRRWLGWEAGGPLGQISTQATDTVVSILSAAVSWVRQSGEQHPLISVLLAFQAGFALGRWGGGRA*
C688J35102_1201081242	3300002568	Soil	MTDSEQQIDQLRRRLGWEAGGPLGQISTQATDAVFSILSSAVSWIRQSGEEHPLISVLIAFEAGFAVGRWGGDRA*
C688J35102_1201437602	3300002568	Soil	MEQRDAETENAMADTEQEIEQLRRQLGWEAGGPLAEISNQATDALVSVVSAAINWTRRSGEERPLISILLAFQAGFALGRWGGRRA*
Ga0063454_1012150961	3300004081	Soil	MTDTEQDIDRLRRRLGWEAGGPLTEISNQATNVLVSIVSAAVRWLRQSGEERPLISILLAFQAGFALGRWGGRRA*
Ga0063455_1014740872	3300004153	Soil	TEQDIDRLRRRLGWEAGGPLTEISNQATNVLVSIVSAAVRWLRQSGEERPLISILLAFQAGFALGRWGGRRA*
Ga0062595_1024479712	3300004479	Soil	MTESEQIDQLRRRLGWEAGGPLAEISTQATDALFSILSAALNWIRQSGEEHPLISVLLAFQAGFAVGRWGGRRA*
Ga0070683_1008450772	3300005329	Corn Rhizosphere	MTDTEQKIDRLRRRLNWEASGPLATISNQATNVLVSIFGAVVSWMRQSGEERPLISILLAFEAGFALGRWGGRRA*
Ga0070683_1017313421	3300005329	Corn Rhizosphere	MTDTEQEIDRLRRRLGWEAGGPLTEISNQATNVLWSIISATVSWLRQSGEERPLISILLAFQAGFALGRWGGRRA*
Ga0070670_1005064191	3300005331	Switchgrass Rhizosphere	MTDTEQEIDRLRRRLGWEAGGPLTEISNQATNVLWSIISAAVSWLRQSGEERPLISILLAFQAGFALGRWGGRRA*
Ga0068868_1002549802	3300005338	Miscanthus Rhizosphere	MTNSEQQIDQLRRRLGWEAGGPLGQISTQATDTVVSILSAAVSWVRQSGVEHPLISIFLAFEVGFALGRWGGRRA*
Ga0070691_103952581	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MTNSEQQIDQLRRRLGWEAGGPLGQISTQATDTVVSILSAAVSWVRQSGEQHPLISVLLAFQAGFALGRWGGGRA*
Ga0070688_1016762712	3300005365	Switchgrass Rhizosphere	MHARRTRWAKADIREQRMTDSEQQIDQLRRRLGWEAGGPLAEISTQATDTVVSILSAAVSWVRQSGVEHPLISIFLAFEVGFALGRWGGRRA*
Ga0070659_1019581891	3300005366	Corn Rhizosphere	MTGSEQQIDQLRRRLGWEAGGPLGQISTQATDTAISLLSATVSWVRQSGEQHPLISILLAFQAGFALGRWGGRRA*
Ga0070709_117376801	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTNSEQQIDQLRRRLGWEAGGPLGQISTQATDTVVSILSAAVSWVRQSGEEHPLISIFLAFEVGFAIGRWGGRRA*
Ga0070714_1002089222	3300005435	Agricultural Soil	MTESEQIDQLRRRLGWEAGGPLAEISTQATDALFSILGAALNWIRQSGEEHPLISVLLAFQAGFAVGRWGGRRA*
Ga0070714_1002397321	3300005435	Agricultural Soil	MTDTEQELDRLRRRLGWEAGGPLAQASTQATDTLVSIIRSAVSWIRHSGQEHPLISVLVAFEAGFALGRWGGRRA*
Ga0070714_1008452841	3300005435	Agricultural Soil	MTDTEREIDRLRRRLGWEAGGPLAEISTQATSRLLSIVIAIAGWLRRSGEERPLISVLLAFQAGFALGRWGGRHAQR*
Ga0070714_1009814262	3300005435	Agricultural Soil	MHARRTLWAQAGTSETPMTDSEQQIDQLRRRLGWETGGPLAQVSTKVTDTLVSILSAAVSWVRQSGKEYPLISVLLAFEAGFALGRWGGRHAQH*
Ga0070713_1001249522	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MHARRTRWAKADTREQRMTDSEQEIDRLRRRLGWEAGGPLAEISNQATGGLVSILSAIVGWLRQPGEERPLISILLALEAGFALGRWGGGRA*
Ga0070713_1004316792	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTDTERELDRLRRRLGWEDGGPLAQVSTQATDTLVSILRSAVSWVRQSGKEHPLISVLLAFEAGFALGRWGGRHA*
Ga0070713_1005215031	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTDTEQEIDRLRRQLGWEAGGPLGQVSTQVADTLVSILGSAVSWMRQSGEEHPLISILLAFEAGFALGRWGGRRA*
Ga0070713_1013295912	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	RRLGWEAGGPLAEISTQATDALFSILGAALNWIRQSGEEHPLISVLLAFQAGFAVGRWGGRRA*
Ga0070713_1017427982	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTDTEQEIDRLRRRLNWEAGGPLATISNQATNVLVSIFGAVVSWIRQSGEERPLISILLAFEAGFALGRWGGRRA*
Ga0070710_104627802	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MTESEQIDQLRRRLGWEAGGPLAEISTQVTDALFSILGAALNWIRQSGEEHPLISVLLAFQAGFAVGRWGGRRA*
Ga0070711_1019737442	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSDTEQEIDRLRRRLGWEAGGPLGEISNHAMDALGSIISATVSWIRRSGEERPLISILLAFEAGFALGRWGGRRA*
Ga0070700_1007764882	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MTDSEQQIDQLRRRLGWEAGGPLGQISAQAADAVFSILSSAVSWIRQSGEEHPLISVLIAFEAGFAVGRWGGD
Ga0070662_1006374592	3300005457	Corn Rhizosphere	MTNSEQQIDQLRRRLGWEAGGPLGQISTQATDTVVSNISAALSWVRQSGEEHPLISIFLAFEVGFALGRWGGRRA*
Ga0070685_106830662	3300005466	Switchgrass Rhizosphere	GHHGRWGSAMHARRTRWAQVEIRETPMTNSEQQIDQLRRRLGWEAGGPLGQISTQATDTVVSILSAAVSWVRQSGEQHPLISVLLAFQAGFALGRWGGRRA*
Ga0070684_1005524532	3300005535	Corn Rhizosphere	MTDTEQQIEKLRRQLGWEAGGPLTGISNQASRGLVSMVSAIVGWLRQSGEEHPLISVLLAFEAGFALGRWGGRRA*
Ga0070684_1006397372	3300005535	Corn Rhizosphere	MTNSEQQIDQLRRRLGWEAGGPLGQISTQATDTAISLLSATVSWVRQSGEQHPLISILLAFQAGFALGRWGGRRA*
Ga0070684_1006480282	3300005535	Corn Rhizosphere	MTNTEQQIDQLRRRLGWEAGGSLTQISTHATDTLASIAGSALNWVRRSGEEHPLVSILLAFQAGFALGRWGGWYAQR*
Ga0068853_1017089072	3300005539	Corn Rhizosphere	MHARRTRWAQVEIREQRMTDSEQQIDQLRRRLGWEAGGPLGQISTQATDTVVSILSAAVSWVRQSGEQHPLISVLLAFQAGFALGRWGGGRA*
Ga0070664_1008009802	3300005564	Corn Rhizosphere	MTDTEQEIDRLRRRVGWEAGGPLTEISNQATNLLWSIVSAAVSWLRHSGEERPLISILLAFQAGFALGRWGGR
Ga0070664_1022199212	3300005564	Corn Rhizosphere	LRRRLDWEAGGPLAEISNQVTGRLLSIVSAIAGWLRQSGEERPLISVLLAFEAGFALGRWGGRRA*
Ga0068857_1002919953	3300005577	Corn Rhizosphere	MTDTEQQIEKLRRQLGWEAGGPLTGISNQATRALVSMVSAIAGWLRQSGEKHPLISVLLAFEAGFAVGRWGGRHA*
Ga0068866_108037892	3300005718	Miscanthus Rhizosphere	MTDAEQEIDRLRRRLGWEAGGPLAQVSTQATDTLVSILSSAVSWIRQSGEEYPLISVLLSVLLAFEAGFALGRWGGRHA*
Ga0068858_1008137461	3300005842	Switchgrass Rhizosphere	MTDTEQQIEKLRRQLGWEAGGPLTGISNQATRALVSMVSAIVGWLRQSGEEHPLISVLLAFEAGFAVGRWGGRRA*
Ga0070717_101912922	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSDTEQEIDRLRRRLGWEAGGPLAEISNHATDALGSIISATMSWIRRSGEERPMISILLAFEAGFALGRWGGRRA*
Ga0070717_102063264	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	EQEIDRLRRRLGWEAGGPLAEISNQATGGLVSILSAIIGWLRQSGEERPLISILLALEAAFALGRWGGGRA*
Ga0070717_103123484	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	IDRLRRRLGWESGGPLGRISTQATNTVVSILGSAVSWIRQSGEERPLVSILLAFQAGFALGRWGGRHAQR*
Ga0070717_105959292	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTDSEQEIDRLRRRLGWEAGGPLAEISNQATGGLVSILSAIVGWLRQPGEERPLISILLALEAGFALGRWGGRRA*
Ga0070717_108107532	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VADTLGESRHQGRAMTDTEQEIDRLRRRLGWEAGGPLAQVSTQITYALVSILVSALRWMRQSGEKHPLISVLLAFEAGFALGRCGGRRA*
Ga0070717_117611252	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	GPLTEISNQATGSLFSGLSALVQWIRRSAEERPLISLLLAFEAGFAIARLGSRRAKL*
Ga0070712_1001487232	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTESEQIDQLRRRLGWEAGGPLAEISTQATDALFSILGAALNWLRQSGEEHPLISVLLAFQAGFAVGRWGGRRA*
Ga0068871_1022105542	3300006358	Miscanthus Rhizosphere	QLRRRLGWEAGGSLTQISTHATDTLASIAGSALNWVRRSGEEHPLVSILLAFQAGFALGRWGGWYAQR*
Ga0079222_103705812	3300006755	Agricultural Soil	MTDAEQEIDRLRRRLGWEAGGPLAQVSTQATDTLVSILGSAASWMRRSGEEHPLISILLAFQASFALGRWGGGRA
Ga0079222_116079252	3300006755	Agricultural Soil	MTATEQEIDRLRRRLGWEAGGPLAQVSTQATDTLVAIFGYAVSWMRQSGEEHPLISILLAFEAGFALGRWGGRRA*
Ga0079221_105469192	3300006804	Agricultural Soil	MTDAEQEIDRLRRRLGWEAGGPLAQVSTQATDTIVSILSSAVSLMRHSGEEYPLISILLAFEAGFAIGRWGGRRA*
Ga0079221_116622201	3300006804	Agricultural Soil	MTDTEQEIDRLRRQLGWEAGGALGQVSTQVTDTSSMLGSAVSWMRQSGEEYPLLSILVAFEAGFALGRWGADMRSVNLLKI
Ga0079220_105147022	3300006806	Agricultural Soil	MTENEQEIDRLRRQLGREAGGPTPKSQATRALVSIAGVVVTWIRRSGADRPLISILLAFEAGRWGGRRA*
Ga0079220_106686472	3300006806	Agricultural Soil	MTDAGQEIDRLRRRLGWEAGGPLAQASTQATDTLVSIIRSAVSWIRHSGQEHPLISVLVAFEAGFALGRWGGRRA*
Ga0079220_108129651	3300006806	Agricultural Soil	LEIDRLRRRLGWDAGGPLTEISNQATNALWSIVSATVSRLRQSREERPLISILLAFQAGFALGRWGGRHA*
Ga0079220_112337992	3300006806	Agricultural Soil	MTDTEQEIDRLRRRLNWEAGGPLATISNQATNVLVSIFGAVVSWMRQSGEERPLISILLAFEAGFALGRWGGRRA*
Ga0079220_118551552	3300006806	Agricultural Soil	MTDAEQEIDRLRRRLGWEAGGPLAQVSTQATDTLVSILRSAVSWVRQSGKEHPLISVLLGFEAGFAPGRWGGRRA*
Ga0079220_119620392	3300006806	Agricultural Soil	QGHHGRWDSAMHARRTRWAQVEIRETPMTNSEQQIAQLRRRLGWEAGGPLGQISTQATDTVVSILSAAVSWVRQSGEGHPLISIFLAFEVGFALGRWGGRSA*
Ga0068865_1008213302	3300006881	Miscanthus Rhizosphere	VEIRETPMTNSEQQIDQLRRRLGWEAGGPLGQISTQATDTVVSILSAAVSWVRQSGEQHPLISVLLAFQAGFALGRWGGGRA*
Ga0075426_110656442	3300006903	Populus Rhizosphere	MTDTEQEIDRLRRRLGWEAGGPLAQVSTQATDTLVAIFGYAVSWMRQSGEEHPLISILLAFEAGFALGRWGGRRA*
Ga0079219_117003642	3300006954	Agricultural Soil	DRKHSRQLAALTDTEQEIDRLRRRLGWDAGGPLTEISNQATNALWSIVSAAVSRLRQSGEERPLISILLAFQAGFALGRWGGRHA*
Ga0111539_118931281	3300009094	Populus Rhizosphere	RQGHHGRWDSAMHARRTRWAQVEIRETPMTNSEQQIDQLRRRLGWEAGGPLGQISTQATDTVVSILSAAVSWVRQSGEEHPLISIFLAFEVGFALGRWGGRRA*
Ga0105245_107251671	3300009098	Miscanthus Rhizosphere	MTDTEQEIDRLRRRLGWEAGGPLTEISIQATNVLWSIISAAVSWLRQSGEERPLISILLAFQAGFALGRWGGRRA*
Ga0111538_109078162	3300009156	Populus Rhizosphere	MTDSEQQIDQLRRRLGWEAGGPLGQISAQAADAVFSILSSAISWIRQSGEEHPLISVLIAFEAGFAVGRWGGDRA*
Ga0105248_127875171	3300009177	Switchgrass Rhizosphere	MTDTEQEIDRLRRRLGWEAGGPLTEISNQATNVLWSIISAAVSWLRQSGEERPLISILLAFQAGFALGRWGGRHA*
Ga0105237_116845461	3300009545	Corn Rhizosphere	MTDSKQQIDQLRRRLGWEAGGPLTQVSTQATDTVVSILGSAVSWMRRSGEEHPLISILLAFEAGFALGRWGGR
Ga0134128_105942622	3300010373	Terrestrial Soil	MTDSEQQIDQLRRRLGWEAGGPLGQISTQATDTVVAILSAALSWVRQSGEEHPLISIFLAFEVGFALGRWGGRRA*
Ga0134128_111533973	3300010373	Terrestrial Soil	RTRWAKADIREQRMTDSEQQIDQLRRRLGWEAGGPLAEISNQATGALVSILSAIVGWLRQSGEQHPLISILLAFQAGFALGRWGGRRA*
Ga0134128_113807441	3300010373	Terrestrial Soil	MTDTEQEIDRLRRRLGWEAGGPLTEISNQATNVLWSIISAAVSWLRQSDEERPLISILLAFQAGFALGRWDGRRA*
Ga0134128_119116812	3300010373	Terrestrial Soil	MTDTEQQIEKLRRQLGWEAGGPLTGISNQATRALISMVSAIVGWLRQSGEEHPLISVLLAFEAGFAVGRWGGRHA*
Ga0105239_102220753	3300010375	Corn Rhizosphere	MTGSEQQIDQLRRRLGWEAGGPLGQISTQATDTVVSILSAAVSWVRQSGEQHPLISVLLAFQAGFALGRWGGGRA*
Ga0105239_107994151	3300010375	Corn Rhizosphere	MTDSKQQIDQLRRRLGWEAGGPLTQVSTQATDTVVSILGSAVSWMRRSGEEHPLISILLAFEAGFALGRWGG
Ga0105239_126617372	3300010375	Corn Rhizosphere	MTDAEQEIDRLRRRLGWEAGGPLAQVSTQATDTLVSILSSAVSWIRQSGEEHPLISVLLAFEAGFALGRWGGRHA*
Ga0134126_114483722	3300010396	Terrestrial Soil	MTESEQIDQLRRRLGWEAGGPLSEISTQATDALFSILSAALNWIRQSGEEHPLISVLLAFQAGFAAGRWGGRRA*
Ga0134126_124414292	3300010396	Terrestrial Soil	MTDTEQEIDRRRRRLGWESGGPLAQVSTRATDTLVSILGYAVSWMRQSGEEHPLISILAFETGFALGRWGGHRA*
Ga0134121_114846671	3300010401	Terrestrial Soil	MTNTEQQIDQLRRRLGWEAGGSLTQISTHATDTLASIAGSALNWVRRSGEEHPLVSILLAFQAGFALGR
Ga0134121_123681302	3300010401	Terrestrial Soil	MTNSEQQINQLRRRLGWEAGGPLGQISTQATDTVVSIISAALSWVRQSGEEHPLISIFLAFHYHRCPT
Ga0105246_106440531	3300011119	Miscanthus Rhizosphere	MTDTEQQIEKLRRQLGWEAGGPLTGISNQATDTLVSILSAAVSWLRQSGEERPLISILLAFEAGFVLGR
Ga0150985_1158931644	3300012212	Avena Fatua Rhizosphere	MADTEPEFERRRLGWEADRPLAKISNQATDALVPVITATINWTRRSGEERPLISVLLDLQAGFALGRWGGRRA*
Ga0150985_1177500213	3300012212	Avena Fatua Rhizosphere	MADTDQEIDRLRRRLGWEAGGPLGQISSQATDTVVSILGSAVSWMRQSGEEHPLISILLAFQAGFALGRWGGRRA*
Ga0150985_1226026602	3300012212	Avena Fatua Rhizosphere	MEQRDAETENAMADTNRQLRRQLGWEVDGPLAEISNQATDALVSVVSAAINWTRRSGEERPLISILLAFQAGFALGRWGGRRA*
Ga0150984_1054528922	3300012469	Avena Fatua Rhizosphere	MTNSEQQIDQLRRWLGWEAGGPLGQISTQATDTVVSILTAAVSWVRQSGEQHPLISVLLAFQAGFALGRWGGGRA*
Ga0150984_1187125604	3300012469	Avena Fatua Rhizosphere	MGQRDAEIENAMADTEPEFERRRLGWEADRPLAKISNQATDALVPVITATINWTRRSGEERPLISVLLDLQAGFALGRWGGRRA*
Ga0150984_1234946992	3300012469	Avena Fatua Rhizosphere	MTDTEQEIDRLRRRLGWEAGGPLTEICNQATNVLWSIVSAAVSRLRQSDEERPLISILLAFQAGFALGRWGGRRA*
Ga0157302_100727512	3300012915	Soil	MTDTEQEIDRLRRRLGWEAGGPLTEISNQATNVLWSIVSAAVSRLRQSGEERPLISILLAFQAGFGLGRWGGRRA*
Ga0164300_101578971	3300012951	Soil	MTNSEQQIDQLRRRLGWEAGGPLGQISTQATDTVVSILSAAVSWVRQSGEQHPLISVLLAFQAGFPRPLYDHRARSWREC
Ga0164298_111956811	3300012955	Soil	QLRRRLGWEAGGPLGQISTQATDTVVSILSAAVSWVRQSGEQHPLISVLLAFQAGFALGRWGGRRA*
Ga0164301_107567742	3300012960	Soil	MTNSEQQIDQLRRRLGWEAGGPLGQISTQATDTVVSILSAAVSWVRQSGEQHPLISVLLAFQAGFALGRWGGRRA*
Ga0164302_108883062	3300012961	Soil	MTNSEQQIDQLRRRLGWEAGGPLGQISTQATDTVVSILSAAVSWVRQSGEEHPLISIFLAFEVGFALGRWGGRRA*
Ga0164302_114361672	3300012961	Soil	GESRHQGRAMTDTEQEIDRLRRRLGWEAGGPLAQVSTQITYALVSIIRSAVSWIRHSGQEHPLISVLVAFEAGFALGRWGGRRA*
Ga0164309_113387672	3300012984	Soil	MTDTEQEIDRLRRRLGWEAGGPLTEISNQATNVLWSIVSAAVSWLRQSGEERPLISILLAFQAGFALGRWGGRRA*
Ga0164308_105087842	3300012985	Soil	MTNGEQQIDQLRRRLGWEAGGPLGQISTQATDTVVSILSAAVSWVRQSGEQHPLISVLLAFQAGFALGRWGGGRA*
Ga0164305_112378131	3300012989	Soil	TEQEIERLRRRLGWEAGGPLAEISNQATDALVSVVSAAINWTRRSGEERPLISILLAFQAGFALGRWGGRRA*
Ga0157371_110685121	3300013102	Corn Rhizosphere	MTNSEQQIDQLRRRLGWEAGGPLGQISTQATDTVVSILSAAVSWVRQSGEQHPLISVLLAFQAGFAL
Ga0157369_121109992	3300013105	Corn Rhizosphere	MTATEQEIERLRRQLGREAGGPVAEISNQATHALVSIAGAVVTTLRQSVEERPLIGLLLA
Ga0157374_100799153	3300013296	Miscanthus Rhizosphere	MTNTEQQIDQLRRRLGWEAGGSLTQISTRATDRLASIAGSALNWVRRSGEEHPLVSILLAFQAGFALGRWGGWYAQR*
Ga0157374_103436182	3300013296	Miscanthus Rhizosphere	MTNSEQQIDQLRRRLGREAGGPLGQISTQATDTVVSNISAALSWVRQSGEEHPLISIFLAFHHHR*
Ga0157374_111860401	3300013296	Miscanthus Rhizosphere	MTDSGQQIDQLRRRLGWEAGGPLAEISNQATGALVSILSAIVGWLRQSGEEHPLISILLAFQAGFALGRWGGRRA*
Ga0157374_115371402	3300013296	Miscanthus Rhizosphere	MTDTEQEIGRIRRRLGWEAGGPLTEVSNQATNVLWSIISATVSWLRQSGEERPLISILLAFQAGFALGRWGGRRA*
Ga0157378_118093862	3300013297	Miscanthus Rhizosphere	MIDTEQEIDRLRRRLGWEAGGPLAQVSTQATDTLVSILGYAVSWMRQSGEEHPLISILPAFETGFALGRWGGHRA*
Ga0163162_126738251	3300013306	Switchgrass Rhizosphere	MADTEQEIDRLRRRLGWETGGPLAGISNQATNALVPIVSAAINWTRRAGGERPLISILLAFQAGFALGRWGGRRA*
Ga0163162_129851142	3300013306	Switchgrass Rhizosphere	MTDSEQQIDQLRRRLGWEAGGPLAEISNQATRALVSMVSAIVGWLRQSGEEHPLISVLLAFQAGFALGRWGGRRA*
Ga0157372_111028041	3300013307	Corn Rhizosphere	MTGSEQQIDQLRRRLGWEAGGPLTQVSTQATDTVVSILGSAVSWMRRSGEEHPLISILLAFQAGFALGRWGGGRRA*
Ga0157375_116192331	3300013308	Miscanthus Rhizosphere	DRLRRRLGWEAGGRLTEISNQATNVLWSVVSAAVSWLRQSGEERPLISILLAFQAGFALGRWDGRRA*
Ga0163163_103900212	3300014325	Switchgrass Rhizosphere	MTGSEQQIDQLRRRLGWEAGGPLAEISNQATGALVSILSAIVGWLRQSGEEHPLISILLAFQAGFALGRWGGRRA*
Ga0182008_101177292	3300014497	Rhizosphere	MTDTEQEIDRLRRRLGWEAGGPLAQVSTQATDTLVSILGYAVSWMRQSGEEHPLISILLAFEAGFALGHWGGHRA*
Ga0182008_101621341	3300014497	Rhizosphere	MTDTKQEIDGLRRRLGWEAGGPLAEISNQATGGLVSILSAIVGWLRQSGEERPLISILLAFEAGFALGRWGGGRA*
Ga0182008_104332041	3300014497	Rhizosphere	MTDSEQQIDQLRRRLGWEAGGPLTQVSTQATDTVVSVLGSAVSWMRRSGEEHPLISILLAFEAGFALACWGGRHA*
Ga0157377_101084912	3300014745	Miscanthus Rhizosphere	MTNSEQQIDQLRRRLGWEAGGPLGQISTQATDTVVSILNAAVSWVRQSGEQHPLISILLAFQAGFALGRWGGRRA*
Ga0157377_103608393	3300014745	Miscanthus Rhizosphere	TEQEIDRLRRRLGWEAVGPLTEISNQATNVLWSVVSAAVSWLRQSGEERPLISILLAFQAGFALGRWGGRRA*
Ga0157379_111881112	3300014968	Switchgrass Rhizosphere	MTDSEQQIDQLRRRLGWEAGGPLGQISTQATDTVVSILSAAVSWVRQSGEQHPLISVLLAFQAGFALGRWGGGRA*
Ga0182005_12865021	3300015265	Rhizosphere	RRRLGWEAGGPLAEISTQATDALFSILSAALNWIRQSGEEHPLISVLLAFQAGFAAGRWGGRRA*
Ga0132258_125023652	3300015371	Arabidopsis Rhizosphere	MTNGEQEIDRLRRRLGWESGGPVGQISTQATDTVVSILGSAVSWLRQSGEEHPLVSILLAFQAGFALGRWGGRHAQR*
Ga0132256_1012322452	3300015372	Arabidopsis Rhizosphere	MTNGEQEIDRLRRRLGWESGGPLGQISTQATDTVVSILGSAVSWLRQSGEEHPLVSILLAFQAGFALGRWGGRHAQR*
Ga0132257_1018299583	3300015373	Arabidopsis Rhizosphere	WEAGGPLAEISNQATGGLVSILSAIVGWLRQPGEERPLISILLALEAGFALGRWGGRRA*
Ga0132255_1024283312	3300015374	Arabidopsis Rhizosphere	MTNGEQEIDRLRRRLGWESGGPVGQISTQATDTVVSILSSVVSWIRQSGEEHPLVSILLAFQAGFALGRWGGRHAQR*
Ga0182038_118401281	3300016445	Soil	MVDTEQEIDRLRRRLGWEAGGPLAEISNHATDALGSIISATVSWIRRSGEERPLVSILLAFEAGFALGRW
Ga0206354_111380252	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MTDTEQEIDRLRRRLGWEAGGPLTQISNQATNVLWSIISATVSWLRQSGEERPLISILLAFQAGFALGRWGGRRA
Ga0154015_10100012	3300020610	Corn, Switchgrass And Miscanthus Rhizosphere	MTNTEQQIDQLRRRLGWEAGGSLTQISTHATDTLASIAGSALNWVRRSGEEHPLVSILLAFQAGFALGRWGGWYAQR
Ga0224712_106312862	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MTDTEQEIDRLRRRLGWEAGGPLTEISNQATNVLWSIISAAVSWLRQSGEERPLISILLAFQAGFALGRWGGRRA
Ga0207692_101904582	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MTESEQIDQLRRRLGWEAGGPLAEISTQVTDALFSILGAALNWIRQSGEEHPLISVLLAFQAGFAVGRWGGRRA
Ga0207692_111142651	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	TREIAMTDTEREIDRLRRRLGWEAGGPLAEISTQATSRLLSIVIAIAGWLRRSGEERPLISVLLAFQAGFALGRWGGRHAQR
Ga0207688_105182412	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MTDTEQEIDRLRRRLGWEAGGPLTEISNQAANVLVPIVSAAVIWLRQSGEERPLISILLAFQAGFALGRWGGRHA
Ga0207688_109234132	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MTNSEQQIDQLRRRLGWEAGGPLGQISTQATDTGVSILSAAVSWVRQSGEQHPLISVLLAFEAGFALGRWGGRRA
Ga0207688_110205791	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	QIDQLRRRLGWEAGGSLTQISTHATDTLASIAGSALNWVRRSGEEHPLVSILLAFQAGFALGRWGGWYAQR
Ga0207699_109905083	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	LDRLRRRPGWEAGGPPAQVSTQATDTLVSILRSAVSWVRQSGKEHPLISVLLAFEAGFALGRWGGRHA
Ga0207671_106580453	3300025914	Corn Rhizosphere	WLRRRLGWEAGGPLAQASTQATDTLVSIIRSAVSWIRHSGQEHPLISVLVAFEAGFALGRWGGRRA
Ga0207693_100290383	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTESEQIDQLRRRLGWEAGGPLAEISTQATDALFSILGAALNWLRQSGEEHPLISVLLAFQAGFAVGRWGGRRA
Ga0207693_103066312	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MHARRTRWAKADTREQRMTDSEQEIDRLRRRLGWEAGGPLAEISNQATGGLVSILSAIVGWLRQPGEERPLISILLAFEAGFALGRWGGRRA
Ga0207663_111867122	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MHARRTRWAKADTREQRMTDSEQEIDRLRRRLGWEAGGPLAEISNQATGGLVSILSAIVGWLRQPGEERPLISILLALEAGKSRE
Ga0207663_117331812	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MTNSEQQIDQLRRRLGWEAGGPLGQISTQATDTVVSILSSAVSWIRQSGEEHPLISVLLAFQAGFALGRW
Ga0207687_108963342	3300025927	Miscanthus Rhizosphere	MTNSEQQIDQLRRRLGWEAGGPLGQISTQATDTVVSILSAAVSWVRQSGEEHPLISIFLAFEVGFALGRWGGRRA
Ga0207700_103983363	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTDTERELDRLRRRLGWEDGGPLAQVSTQATDTLVSILRSAVSWVRQSGKEHPLISVLLAFEAGFALGRWGGRHA
Ga0207700_107801412	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTESEQIDQLRRRLGWEAGGPLAEISTQATDALFSILGAALNWIRQSGEEHPLISVLLAFQAGFAVGRWGGRRA
Ga0207700_107940582	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTNGEQEIDRLRRRLGWESGGPLGRISTQATNTVVSILGSAVSWIRQSGEERPLVSILLAFQAGFALGRWGGRHAQR
Ga0207700_118917632	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	TEQEIDRLRRRLGWEAGGPLAEISNHATDALGSIISATMSWIRRSGEERPMISILLAFEAGFALGRWGGRRA
Ga0207664_112435012	3300025929	Agricultural Soil	VTDTEQEIDRLRRRLGWEAGGPLAQVSTQITYALVSILVSALRWMRQSGEEHPLISVLLAFEAGFALGRWGGRRA
Ga0207661_109863881	3300025944	Corn Rhizosphere	MTDTEQEIDRLRRRLGWEAGGPLTEISNQATNVLWSIISATVSWLRQSGEERPLISILLAFQ
Ga0207661_121532262	3300025944	Corn Rhizosphere	LGWEAGGPLTEISNQATNVLWSIISATVSWLRQSGEERPLISVLLAFEAGFALGRWGGRR
Ga0207679_107890413	3300025945	Corn Rhizosphere	MTDTEQEIDRLRRRLGWEAGGPLTEISNQATNLLWSIVSAAVSWLRHSGEERPLISILLAFQAGFALGRWGGRRA
Ga0207702_107217522	3300026078	Corn Rhizosphere	MTGSEQQIDQLRRRLGWEAGGPLAEISNQATGALVSILSAIVGWLRQSGEQHPLISILLAFQAGFALGRWGGRRA
Ga0207676_107726133	3300026095	Switchgrass Rhizosphere	RRRLGWEAGGPLTEISNQATNVLWSIISAAVSRLRQSGEERPLISILLAFEAGFALGRWGGRHA
Ga0207674_121690222	3300026116	Corn Rhizosphere	MTDTEQEIDRLRRRLGWEAGGRLTEISNQATNVLWSVVSAAVSWLRQSGEERPLISILLAFQAGFALGRWGGRRA
Ga0207698_110555282	3300026142	Corn Rhizosphere	MTDSEQQIDQLRRRLGWEAGGPLTEISNQAANVLVPIVSAAVIWLRQSGEERPLISILLAFQAGFALGRWGGRRA
Ga0102760_109286311	3300031039	Soil	MTDTEQEIDRLRRRLGWEAGGPLTEISNQATNVLWSIISATVSWLRQSGEERPLISILLAFQAGFALGRWGGRRA
Ga0308175_1002653142	3300031938	Soil	MTESEQIDQLRRRLGWEAGGPLAEISTQATDALFSILGAALNWIRQSGEEHPLISVLLAFQAGFAVGRWGSRRA
Ga0308174_113552761	3300031939	Soil	RLGWGAGGPLAETSNQATNALVPIVSAAVSWMRQSGEEHPLISVLLAFEAGFALGRWGGHRA
Ga0308176_112544092	3300031996	Soil	MTDTEQEIDRLRRRLGWEAGGPLAQVSTQATDTLVSILGYAVSWMRQSGEEHPLISILPAFETGFALGRWGGHRA
Ga0308176_128659691	3300031996	Soil	MTESEQIDQLRRRLGWEAGGPLAEISTQATDALFSILSAALNWIRQSGEEHPLISVLLAFQAGFAVGRWGGRRA
Ga0308173_107949143	3300032074	Soil	MRESEQIDQLRRRLGWEAGGPLAEISTQATDALFSILGAALNWIRQSGEEHPLISVLLAFQAGFAVGRWGSRRA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F046524

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences