Metagenome / Metatranscriptome Family F046561

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F046561
Family Type	Metagenome / Metatranscriptome
Number of Sequences	151
Average Sequence Length	47 residues
Representative Sequence	VIKDDEYEMEQHYGHSGITMWKENMKWSAWLQDYPTAEQKPKTASASR
Number of Associated Samples	132
Number of Associated Scaffolds	151

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.66 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	90.73 %
Associated GOLD sequencing projects	126
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (15.232 % of family members)
Environment Ontology (ENVO)	Unclassified (33.775 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.709 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.37% β-sheet: 0.00% Coil/Unstructured: 77.63%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 151 Family Scaffolds
PF03795	YCII	15.89
PF02163	Peptidase_M50	13.25
PF13176	TPR_7	4.64
PF13450	NAD_binding_8	1.99
PF03475	3-alpha	1.32
PF13432	TPR_16	1.32
PF13181	TPR_8	1.32
PF01494	FAD_binding_3	0.66
PF14559	TPR_19	0.66
PF08327	AHSA1	0.66

COG ID	Name	Functional Category	% Frequency in 151 Family Scaffolds
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	15.89
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.32
COG2258	N-hydroxylaminopurine reductase YiiM, contains MOSC domain	Defense mechanisms [V]	1.32
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.66
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.66
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	89.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.32 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	89.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.32 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	23.84 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	5.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.32 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	23.84 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	5.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.32 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	23.84 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	5.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.32 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	23.84 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	5.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.32 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	23.84 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	5.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.32 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459010\|GIO7OMY01D3ATD	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	524	Open in IMG/M
2209111022\|2221197811	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	615	Open in IMG/M
3300000955\|JGI1027J12803_101686560	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300000956\|JGI10216J12902_105749758	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	515	Open in IMG/M
3300001661\|JGI12053J15887_10592651	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300004156\|Ga0062589_102271614	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	557	Open in IMG/M
3300004157\|Ga0062590_101871899	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	618	Open in IMG/M
3300004480\|Ga0062592_102159115	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	554	Open in IMG/M
3300005093\|Ga0062594_100887084	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	840	Open in IMG/M
3300005172\|Ga0066683_10879102	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515	Open in IMG/M
3300005174\|Ga0066680_10282244	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1059	Open in IMG/M
3300005175\|Ga0066673_10118466	All Organisms → cellular organisms → Bacteria	1442	Open in IMG/M
3300005175\|Ga0066673_10826961	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	529	Open in IMG/M
3300005290\|Ga0065712_10046303	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	732	Open in IMG/M
3300005331\|Ga0070670_101020232	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	753	Open in IMG/M
3300005340\|Ga0070689_101838489	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	553	Open in IMG/M
3300005354\|Ga0070675_100881153	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	820	Open in IMG/M
3300005435\|Ga0070714_100364133	All Organisms → cellular organisms → Bacteria	1360	Open in IMG/M
3300005438\|Ga0070701_10239304	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1091	Open in IMG/M
3300005447\|Ga0066689_10064486	All Organisms → cellular organisms → Bacteria	2011	Open in IMG/M
3300005451\|Ga0066681_10140400	All Organisms → cellular organisms → Bacteria	1413	Open in IMG/M
3300005455\|Ga0070663_100413743	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1105	Open in IMG/M
3300005457\|Ga0070662_101522783	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	577	Open in IMG/M
3300005467\|Ga0070706_100120771	All Organisms → cellular organisms → Bacteria	2443	Open in IMG/M
3300005468\|Ga0070707_100262250	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1681	Open in IMG/M
3300005536\|Ga0070697_102028050	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515	Open in IMG/M
3300005556\|Ga0066707_10299686	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1052	Open in IMG/M
3300005556\|Ga0066707_10971651	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
3300005576\|Ga0066708_10365445	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	927	Open in IMG/M
3300005844\|Ga0068862_101240405	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	745	Open in IMG/M
3300006032\|Ga0066696_11094246	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	507	Open in IMG/M
3300006034\|Ga0066656_11099628	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300006046\|Ga0066652_101161567	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300006173\|Ga0070716_101108445	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	632	Open in IMG/M
3300006175\|Ga0070712_102031077	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	503	Open in IMG/M
3300006796\|Ga0066665_10697178	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	804	Open in IMG/M
3300006797\|Ga0066659_10018217	All Organisms → cellular organisms → Bacteria	3959	Open in IMG/M
3300006797\|Ga0066659_10475361	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	998	Open in IMG/M
3300009012\|Ga0066710_103757823	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	570	Open in IMG/M
3300009038\|Ga0099829_10712894	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	834	Open in IMG/M
3300009038\|Ga0099829_11718938	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515	Open in IMG/M
3300009098\|Ga0105245_10835412	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	960	Open in IMG/M
3300009137\|Ga0066709_101651312	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	913	Open in IMG/M
3300009137\|Ga0066709_102302240	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	738	Open in IMG/M
3300009143\|Ga0099792_10739649	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	639	Open in IMG/M
3300009148\|Ga0105243_12864246	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	523	Open in IMG/M
3300009162\|Ga0075423_13215337	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	501	Open in IMG/M
3300009174\|Ga0105241_11569264	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	636	Open in IMG/M
3300010040\|Ga0126308_10822980	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	644	Open in IMG/M
3300010044\|Ga0126310_11842962	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	505	Open in IMG/M
3300010047\|Ga0126382_10916744	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	760	Open in IMG/M
3300010048\|Ga0126373_12819926	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	542	Open in IMG/M
3300010304\|Ga0134088_10478530	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	612	Open in IMG/M
3300010329\|Ga0134111_10281364	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	689	Open in IMG/M
3300010358\|Ga0126370_10073317	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2272	Open in IMG/M
3300010359\|Ga0126376_12680288	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	547	Open in IMG/M
3300010361\|Ga0126378_11549826	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	752	Open in IMG/M
3300010361\|Ga0126378_11894868	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	679	Open in IMG/M
3300010376\|Ga0126381_100449030	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1808	Open in IMG/M
3300010376\|Ga0126381_101513281	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	970	Open in IMG/M
3300010398\|Ga0126383_12150707	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	645	Open in IMG/M
3300012198\|Ga0137364_10862012	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	685	Open in IMG/M
3300012198\|Ga0137364_11264008	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	551	Open in IMG/M
3300012201\|Ga0137365_11350353	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300012203\|Ga0137399_10209269	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1586	Open in IMG/M
3300012204\|Ga0137374_11053549	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	583	Open in IMG/M
3300012208\|Ga0137376_10090447	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2580	Open in IMG/M
3300012210\|Ga0137378_10217109	All Organisms → cellular organisms → Bacteria	1780	Open in IMG/M
3300012211\|Ga0137377_11656157	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	562	Open in IMG/M
3300012349\|Ga0137387_10824811	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	671	Open in IMG/M
3300012351\|Ga0137386_10685873	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300012355\|Ga0137369_10482197	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	879	Open in IMG/M
3300012356\|Ga0137371_10584869	All Organisms → cellular organisms → Bacteria → Proteobacteria	858	Open in IMG/M
3300012356\|Ga0137371_11355674	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	524	Open in IMG/M
3300012357\|Ga0137384_10833097	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	745	Open in IMG/M
3300012359\|Ga0137385_10594200	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	931	Open in IMG/M
3300012362\|Ga0137361_10762474	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	882	Open in IMG/M
3300012685\|Ga0137397_11269493	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	526	Open in IMG/M
3300012896\|Ga0157303_10263714	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	532	Open in IMG/M
3300012917\|Ga0137395_10296162	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1145	Open in IMG/M
3300012929\|Ga0137404_11775427	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	573	Open in IMG/M
3300012957\|Ga0164303_10834689	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	638	Open in IMG/M
3300012972\|Ga0134077_10593314	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
3300012985\|Ga0164308_10666102	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	893	Open in IMG/M
3300013297\|Ga0157378_10583971	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1127	Open in IMG/M
3300013297\|Ga0157378_10729588	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1012	Open in IMG/M
3300013297\|Ga0157378_11025440	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	860	Open in IMG/M
3300013307\|Ga0157372_12663809	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	574	Open in IMG/M
3300013308\|Ga0157375_10889369	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1035	Open in IMG/M
3300014325\|Ga0163163_12822354	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	542	Open in IMG/M
3300015241\|Ga0137418_10029831	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	5051	Open in IMG/M
3300015356\|Ga0134073_10300460	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	573	Open in IMG/M
3300015371\|Ga0132258_10733598	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2488	Open in IMG/M
3300015371\|Ga0132258_12945886	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1182	Open in IMG/M
3300015372\|Ga0132256_102443565	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	625	Open in IMG/M
3300015373\|Ga0132257_102201149	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	713	Open in IMG/M
3300015373\|Ga0132257_102917925	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	623	Open in IMG/M
3300015374\|Ga0132255_104552873	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	587	Open in IMG/M
3300016387\|Ga0182040_11461238	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	580	Open in IMG/M
3300016404\|Ga0182037_11653651	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	570	Open in IMG/M
3300018072\|Ga0184635_10211526	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	772	Open in IMG/M
3300018075\|Ga0184632_10317431	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	672	Open in IMG/M
3300018433\|Ga0066667_11493957	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	597	Open in IMG/M
3300018468\|Ga0066662_10598613	All Organisms → cellular organisms → Bacteria → Proteobacteria	1031	Open in IMG/M
3300019870\|Ga0193746_1003872	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1369	Open in IMG/M
3300019873\|Ga0193700_1003199	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2411	Open in IMG/M
3300019877\|Ga0193722_1150656	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	507	Open in IMG/M
3300019886\|Ga0193727_1023999	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2149	Open in IMG/M
3300019890\|Ga0193728_1280974	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	646	Open in IMG/M
3300020008\|Ga0193757_1000606	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2269	Open in IMG/M
3300021168\|Ga0210406_10244047	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1476	Open in IMG/M
3300021510\|Ga0222621_1004864	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2330	Open in IMG/M
3300021560\|Ga0126371_12018414	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	694	Open in IMG/M
3300021560\|Ga0126371_12282693	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	653	Open in IMG/M
3300022756\|Ga0222622_10939660	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	634	Open in IMG/M
3300023058\|Ga0193714_1017162	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300023058\|Ga0193714_1020666	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	975	Open in IMG/M
3300025315\|Ga0207697_10117844	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1141	Open in IMG/M
3300025315\|Ga0207697_10199268	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	880	Open in IMG/M
3300025907\|Ga0207645_10332332	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1015	Open in IMG/M
3300025916\|Ga0207663_10041562	All Organisms → cellular organisms → Bacteria	2802	Open in IMG/M
3300025933\|Ga0207706_11533987	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	542	Open in IMG/M
3300025934\|Ga0207686_10490471	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	952	Open in IMG/M
3300025939\|Ga0207665_11017649	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	659	Open in IMG/M
3300025972\|Ga0207668_10126991	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1941	Open in IMG/M
3300026308\|Ga0209265_1132966	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	630	Open in IMG/M
3300026310\|Ga0209239_1289226	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	566	Open in IMG/M
3300026312\|Ga0209153_1298970	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	515	Open in IMG/M
3300026323\|Ga0209472_1299412	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	515	Open in IMG/M
3300026333\|Ga0209158_1067004	All Organisms → cellular organisms → Bacteria	1423	Open in IMG/M
3300026523\|Ga0209808_1045747	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2026	Open in IMG/M
3300026741\|Ga0207510_104248	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	518	Open in IMG/M
3300028784\|Ga0307282_10318517	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	750	Open in IMG/M
3300028878\|Ga0307278_10322338	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	682	Open in IMG/M
3300028884\|Ga0307308_10006834	All Organisms → cellular organisms → Bacteria	4956	Open in IMG/M
3300030916\|Ga0075386_12134559	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	604	Open in IMG/M
3300030916\|Ga0075386_12214983	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	719	Open in IMG/M
3300031469\|Ga0170819_13306525	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	576	Open in IMG/M
3300031469\|Ga0170819_13385691	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	538	Open in IMG/M
3300031719\|Ga0306917_10762361	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	759	Open in IMG/M
3300031858\|Ga0310892_10537643	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	783	Open in IMG/M
3300031858\|Ga0310892_10715242	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	688	Open in IMG/M
3300031879\|Ga0306919_11410893	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	525	Open in IMG/M
3300031892\|Ga0310893_10202470	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	801	Open in IMG/M
3300031912\|Ga0306921_11249707	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	824	Open in IMG/M
3300031938\|Ga0308175_100977585	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	935	Open in IMG/M
3300031945\|Ga0310913_10781794	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	674	Open in IMG/M
3300032001\|Ga0306922_11167478	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	785	Open in IMG/M
3300032159\|Ga0268251_10117831	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	967	Open in IMG/M
3300032180\|Ga0307471_102255915	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	686	Open in IMG/M
3300032205\|Ga0307472_100601514	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	971	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.79%
Host-Associated	Host-Associated	19.21%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.15%
Plants	Host-Associated → Plants	19.21%
Aquatic	Environmental → Aquatic	2.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.96%
Sediment	Environmental → Aquatic → Sediment	2.65%
Roots	Host-Associated → Plants → Roots	0.66%
Phylloplane	Host-Associated → Plants → Phylloplane	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.54%
Loam	Environmental → Terrestrial → Soil → Loam	8.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.62%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.30%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.99%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.66%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	17.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.30%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.97%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.65%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.99%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.32%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.66%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.66%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.28%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.30%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.31%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.31%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.99%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.32%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.32%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.32%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.32%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.32%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.32%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.32%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.32%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.32%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.66%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.66%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.66%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.66%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.66%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.66%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.66%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.66%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
2209111022	Grass soil microbial communities from Rothamsted Park, UK - Chitin enrichment	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019870	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m1	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020008	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m2	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023058	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026741	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO21-C (SPAdes)	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F62_06116040	2170459010	Grass Soil	VIKDDEYEMEQHYGHSGITMWKENMKWSAWLQSSPTAEEKPKTASAS
2222020893	2209111022	Grass Soil	VIKDYEYEKEQHYGHSGITMWKENMKWSGWLQSYATAEQKPETASASR
JGI1027J12803_1016865601	3300000955	Soil	YGHSGITVWKENMKWSAWLQDYQASDAAKPKTSTASR*
JGI10216J12902_1057497581	3300000956	Soil	HSGITVWKENMKWSAWLQDYQTAEQKPKTATASR*
JGI12053J15887_105926512	3300001661	Forest Soil	CPVIKDDEYEMEQHYGHSGITMWKENMKWSAWLQYYRTAEEKPKTASTSR*
Ga0062589_1022716142	3300004156	Soil	HYGHSGITMWKENMKWSAWLQTYPEPEEKPKTASASQPQTSE*
Ga0062590_1018718992	3300004157	Soil	AGRLFWCPVIKDDEYEKEQHYGHSGITMWRENMKWSAWLQSYRTAEQKPETASASR*
Ga0062592_1021591152	3300004480	Soil	YGHSGITMWKENMKWSAWLQTYPEPEEKPKTASASRPQTSE*
Ga0062594_1008870841	3300005093	Soil	YEKEQHYGHSGITMWRENMKWSAWLQSYQTAEEKPKTASASR*
Ga0066683_108791022	3300005172	Soil	WCPVKKDDEYEVEQHYGHSGITMWKENTKWSAWLQEYQTAQQTPQTANALAPR*
Ga0066680_102822441	3300005174	Soil	WCPVKKDDEYEVEQHYGHSGITMWKENTKWSAWLQEYQTAQQTPQTANALGPR*
Ga0066673_101184661	3300005175	Soil	LFWCPVKKDDEYEVEQHYGHSGITAWKENLQWSAWLQDYELSEQKSKTTTASR*
Ga0066673_108269611	3300005175	Soil	KDDEYEMEQHFGHSGITMWRENMKWSAWLQYYETAEQKSKTASASR*
Ga0065712_100463031	3300005290	Miscanthus Rhizosphere	KDYEYEKEQHHGHSGITMWKENMKWSAWLQSYETAEQKPGTASASR*
Ga0070670_1010202321	3300005331	Switchgrass Rhizosphere	FWCPVIKDDEYEVEQHYGHSGITVWKENMKWSAWLQDYGTAEEQPKAANASR*
Ga0070689_1018384891	3300005340	Switchgrass Rhizosphere	DYEYEKEQHYGHSGITMWKENMKWSAWLQSYQTAEQKPGTASASR*
Ga0070675_1008811531	3300005354	Miscanthus Rhizosphere	GRLFWCPVVKDDEYEVEQHYGHSGITVWKENMKWSAWLQDYETAEEKPKTASASR*
Ga0070714_1003641331	3300005435	Agricultural Soil	EQHYGHSGITMWRENMKWSAWLQTYPSAEEKRQTAEEKPQTASASR*
Ga0070701_102393041	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	EQHYGHSGITMWRENMKWSAWLQTYPSAEEKRQTAEEKSETASASR*
Ga0066689_100644863	3300005447	Soil	EQHYGHSGITMWRENMKWSAWLQEYQQESEEKPNTASASSATR*
Ga0066681_101404003	3300005451	Soil	PVKKDDEYEAEQHYGHSGITMWKENMKWSAWLQSYPTAEQKPKTASATR*
Ga0070663_1004137432	3300005455	Corn Rhizosphere	KDHEYEAEQHYGHSGITMWRENMKWSAWLQTYPSAEEKRQTAEEKSETASASR*
Ga0070662_1015227831	3300005457	Corn Rhizosphere	VVKDDEYEVEQHYGHSGITVWKENMKWSAWLQDYETAEEKPKTASASR*
Ga0070706_1001207711	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	RLFWRPVKKDDEYEVEQHYGHSGITMWKENMKWSAWLQEYQTAQQTPQTANALAPR*
Ga0070707_1002622504	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VIKDDEYEAEQHYGHSGITMWRENMKWSAWLQEYQQESEEKPNTPSASAVTR*
Ga0070697_1020280501	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	RLFWCPVIKDDEYEVEQHYGHSGITVWKENMKWSAWLQEYQASDAAKPKTSTASR*
Ga0066707_102996861	3300005556	Soil	EAEQHYGHSGITMWRENMKWSAWLQEYQSTEEKPKTATASR*
Ga0066707_109716512	3300005556	Soil	KDDEYEMEQHYGHSGITMWRENMQWSAWLQDKETAENTSETAAAPR*
Ga0066708_103654452	3300005576	Soil	EQHYGHSGITMWKENMKWSAWLQSDPTAEQKPKTASATR*
Ga0068862_1012404052	3300005844	Switchgrass Rhizosphere	FWCPVIKDHEYEAEQHYGHSGITMWRENMKWSAWLQTYPSAEEKRQTAEEKSETASASR*
Ga0066696_110942462	3300006032	Soil	FWCPVIKDDEYEMEQHYGHSGITMWKENMKWSAWLQHYPSAEEKPKTASASR*
Ga0066656_110996281	3300006034	Soil	PVIKDDEYEMEQHYGHSGITMWRENMQWSAWLQDKETAENTSETAAAPR*
Ga0066652_1011615671	3300006046	Soil	EQHYGHSGITAWKENLQWSAWLQDYELSEQKSKTTTASR*
Ga0070716_1011084451	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	FWCPVVKDDEYEVEQHYGHSGITVWKENMKWSAWLQDYETAEEKPKTASASR*
Ga0070712_1020310772	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	IKDYEYEKEQHYGHSGITMWKENMKWSAWLQSYSTPEEKPKTASTSR*
Ga0066665_106971782	3300006796	Soil	AGRLFWCQVRKDDEYEVEQHYGHSGITVWKENMKWSAWLQEYQTTTASR*
Ga0066659_100182174	3300006797	Soil	LFWCPVKKDDEYEVEQHYGHSGITMWKENTKWSAWLQEYQTAQQTPQTANALGPR*
Ga0066659_104753612	3300006797	Soil	PVKKDDEYEMEQHFGHSGITMWRENMKWSAWLQYYETAEQKSKTASASR*
Ga0066710_1037578232	3300009012	Grasslands Soil	VIKDDEYEMEQHYGHSGITMWRENMQWSAWLQDKETAENTSETAAAPR
Ga0099829_107128942	3300009038	Vadose Zone Soil	WCAVKKDDEYEVEQHYGHSGITMWKENMKWSAWLQEYQAAPQTPQTANALAPR*
Ga0099829_117189381	3300009038	Vadose Zone Soil	DEYEMEQHYGHSGITMWKENMKWSAWLQYYRTAEQKPKTASASR*
Ga0105245_108354121	3300009098	Miscanthus Rhizosphere	GRLFWCPVIKDHEYEAEQHYGHSGITMWRENMKWSAWLQTYPSAEEKRQTAEEKSETASASR*
Ga0066709_1016513123	3300009137	Grasslands Soil	VIKDDEYEMEQHYGHSGITMWRENMQWSAWLQDKETAENTSETAAAPR*
Ga0066709_1023022401	3300009137	Grasslands Soil	EMEQHYGHSGITMWKENMKWSAWLQYHPTVEQKPKTASASR*
Ga0099792_107396492	3300009143	Vadose Zone Soil	GITMWKENTKWSAWLQEYQTAQQTPQTANALGPR*
Ga0105243_128642462	3300009148	Miscanthus Rhizosphere	GHSGITMWKENMKWSAWLQSYSTPEEKPKTASASR*
Ga0075423_132153371	3300009162	Populus Rhizosphere	QHYGHSGITMWRENMKWSAWLQDYETAEQKPKTASASR*
Ga0105241_115692641	3300009174	Corn Rhizosphere	DDEYEMEQHYGHSGITMWKENMKWSAWLQSYRTAEQKPKTASASR*
Ga0126308_108229802	3300010040	Serpentine Soil	EQHYGHSGITMWKENMKWSAWLQYHPTVEQKPKTASASR*
Ga0126310_118429622	3300010044	Serpentine Soil	RAGRLFWCPVIKDDEYEMEQHYGHSGITMWKENMKWSAWLQYHPTVEQKPKTASASR*
Ga0126382_109167441	3300010047	Tropical Forest Soil	VEQHYGHSGITVWKENMKWSAWLQDYQTAEEEPKAASASR*
Ga0126373_128199261	3300010048	Tropical Forest Soil	NDEYEVEQHYGHSGITVWKENMKWSAWLQDYDTAEEKPKTADASR*
Ga0134088_104785302	3300010304	Grasslands Soil	HYGHSGITMWKENMQWSAWLQDKETADNKPDTAAAPR*
Ga0134111_102813642	3300010329	Grasslands Soil	FWCPVKKDDEYEVEQHYGHSGITMWKENTKWSAWLQEYQTAQQTPQTANALEPR*
Ga0126370_100733173	3300010358	Tropical Forest Soil	VIKDDEYEVEQHYGHSGITVWKENMKWSAWLQDYETAEEKPKTASASR*
Ga0126376_126802882	3300010359	Tropical Forest Soil	PVKKDDEYEAEQHYGHSGITMWRENLKWSAWLQTYPSTE*
Ga0126378_115498261	3300010361	Tropical Forest Soil	IKDDEYEVEQHYGHSGITVWKENMKWSAWLQDYETAEEKPKTASASR*
Ga0126378_118948681	3300010361	Tropical Forest Soil	HSGITVWKENMKWSAWLQEYQTAQQKPKPAAASR*
Ga0126381_1004490301	3300010376	Tropical Forest Soil	VEQHYGHSGITMWRENMKWSAWLQDYSTDVEKPKTASATH*
Ga0126381_1015132812	3300010376	Tropical Forest Soil	LFWCQVKKDDEYEVEQHFGHSGITMWRENMQWSAWLQDYATPEQKPESPSASR*
Ga0126383_121507071	3300010398	Tropical Forest Soil	KDDEYEVEQHYGHSGITVWKENMKWSAWLEDYETAEEKPKTASASR*
Ga0137364_108620121	3300012198	Vadose Zone Soil	KKDDEYEAEQHYGHSGITMWKENMKWSAWLQEYQSTEQKPKTATASR*
Ga0137364_112640081	3300012198	Vadose Zone Soil	KKDDEYEAEQHYGHSGITMWKENMKWSAWLQEYQSTEQKPKAATASR*
Ga0137365_113503531	3300012201	Vadose Zone Soil	EYEMEQHYGHSGITMWKENMKWSAWLQDYPTAEQKPKTASASR*
Ga0137399_102092691	3300012203	Vadose Zone Soil	EQHYGHSGITMWKENMKWSAWLQSSPTAEEKPKTASASR*
Ga0137374_110535492	3300012204	Vadose Zone Soil	IKDDEYEMEQHYGHSGITMWKENMKWSAWLQYHETAEQKPKTASASR*
Ga0137376_100904474	3300012208	Vadose Zone Soil	WCHVKEDHEYEAEQHYGHSGITMWKENMKWSAWLQEYQQESDEKPDTASVSSVTR*
Ga0137378_102171091	3300012210	Vadose Zone Soil	GRLFWCSVKKDDEYEVEQHYGHSGITAWKENPQWTAWLQDYEPSEQKPKTNTVSR*
Ga0137377_116561571	3300012211	Vadose Zone Soil	KKDDEYEVEQHYGHSGITAWKENPQWTAWLQDYQLSEQKPKTNTASR*
Ga0137387_108248112	3300012349	Vadose Zone Soil	GRLFWCQVRKDDEYEVEQHYGHSGITVWKENMKWSAWLQEYQTTTASR*
Ga0137386_106858732	3300012351	Vadose Zone Soil	LFWCSVKKDDEYEVEQHYGHSGITAWKENPQWTAWLQDYEPSEQKPKTNTVSR*
Ga0137369_104821971	3300012355	Vadose Zone Soil	VIKDDEYEVEQHYGHSGITAWKENVQWSAWLQDYEPGKPKAKAATASR*
Ga0137371_105848693	3300012356	Vadose Zone Soil	LFWCQVKKDDEYEAEQHYGHSGITMWKENMKWSAWLQEYQSTEQKPKTATASR*
Ga0137371_113556741	3300012356	Vadose Zone Soil	QHYGHSGITAWKENMQWSAWLQDYEPGKPKAKAATASR*
Ga0137384_108330972	3300012357	Vadose Zone Soil	VIKDDEYEAEQHYGHSGITMWRENMKWSAWLQEYQQESEQKPDTASASSVTR*
Ga0137385_105942003	3300012359	Vadose Zone Soil	EQHYGHSGITMWRENMKWSAWLQEYQQESEQKPDTASASSVTR*
Ga0137361_107624742	3300012362	Vadose Zone Soil	WCHVKEDHEYEAEQHYGHSGITMWKENMKWSAWLQEYQQESDEKPETASVSSVTR*
Ga0137397_112694932	3300012685	Vadose Zone Soil	CPVIKDDEYEMEQHYGHSGITMWKENMKWSAWLQYYRTAEEKPKTASASR*
Ga0157303_102637142	3300012896	Soil	EKEQHYGHSGITMWKENMKWSAWLQSYETAEQKPQAASASR*
Ga0137395_102961622	3300012917	Vadose Zone Soil	VKKDDEYEVEQHYGHSGITMWRENTKWSAWLQEYQTAQQTPQTANALAPR*
Ga0137404_117754271	3300012929	Vadose Zone Soil	RGHSGITMWRENMQWSAWLQDKETADNNSKTTAASR*
Ga0164303_108346891	3300012957	Soil	MEQHYGHSGITMWKENMKWSAWLQDYPTAEQKPKTDSASR*
Ga0134077_105933142	3300012972	Grasslands Soil	FWCPVIKDHEYEMEQHYGHSGITMWKENMQWSAWLQDKETADNKPDTAAAPR*
Ga0164308_106661022	3300012985	Soil	LFWCPVIKDYEYEKEQHYGHSGITMWKENMKWSAWLQSYSTAEEKPKTASASR*
Ga0157378_105839711	3300013297	Miscanthus Rhizosphere	EYEAEQHYGHSGITMWRENMKWSAWLQTYPSAEEKRQTAEEKPQTASASR*
Ga0157378_107295881	3300013297	Miscanthus Rhizosphere	KEQHYGHSGITMWKENMKWSAWLQSYQTAEQKPGTASASR*
Ga0157378_110254402	3300013297	Miscanthus Rhizosphere	IKDYEYEKEQHYGHSGITMWKENMKWSAWLQSYQTAEQKPETASASR*
Ga0157372_126638092	3300013307	Corn Rhizosphere	DYEYEKEQHYGHSGITMWKENMKWSAWLQSYQTAEQKPQAASASR*
Ga0157375_108893691	3300013308	Miscanthus Rhizosphere	YGHSGITMRKENMKWSAWLQYYRTAEQKPKAASASR*
Ga0163163_128223541	3300014325	Switchgrass Rhizosphere	DDEYEMEQHYGHSGITMWKENMKWSAWLQHYPSADEKPNTASTSR*
Ga0137418_100298314	3300015241	Vadose Zone Soil	GRLFWCPVIKDDEYEMEQHYGHSGITMWKENMKWSAWLQDYPTAEQKPKTASASR*
Ga0134073_103004602	3300015356	Grasslands Soil	DEYEVEQHYGHSGITMWKENTKWSAWLQEYQTAQQTPQTANALAPR*
Ga0132258_107335983	3300015371	Arabidopsis Rhizosphere	EYEAEQHHGHSGITMWRENMKWSAWLQTYPSAEEKRQTSEEKPETASAAR*
Ga0132258_129458862	3300015371	Arabidopsis Rhizosphere	LFWCPVIKDYEYEKEQHYGHSGITMWKENMKWSAWLQSYSTPEEKPKTASAGR*
Ga0132256_1024435651	3300015372	Arabidopsis Rhizosphere	YGHSGITVWKENMKWSAWLQDYESVEEAPKAANASR*
Ga0132257_1022011491	3300015373	Arabidopsis Rhizosphere	VEQHYGHSGITVWKENMKWSAWLQDYETAEEKPNTASAFR*
Ga0132257_1029179252	3300015373	Arabidopsis Rhizosphere	VIKDYEYEKEQHYGHSGITMWKENMKWSAWLQSYSTAEEKPKTASASR*
Ga0132255_1045528732	3300015374	Arabidopsis Rhizosphere	GHSGITMWKENMKWSAWLQSYQTVEEKPKTASASR*
Ga0182040_114612381	3300016387	Soil	YEVEQHFGHSGITVWKENMKWSAWLQDYETAEQQPKTATASR
Ga0182037_116536512	3300016404	Soil	CPVVKDDEYEVEQHYGHSGITVWKENMKWSAWLQDYETAEEKPKTASTSH
Ga0184635_102115262	3300018072	Groundwater Sediment	VIKDDEYEMEQHYGHSGITMWKENMKWSAWLQSYSTAEQKPKTASASR
Ga0184632_103174311	3300018075	Groundwater Sediment	QHYGHSGITMWKENMKWSAWLQDYPSADEKPKTASASR
Ga0066667_114939571	3300018433	Grasslands Soil	YGHSGITMWKENMKWSAWLQSYPSAEQKPKTASASR
Ga0066662_105986131	3300018468	Grasslands Soil	GRLFWCKVKKDDEYEVEQHYGHSGITMWKENMKWSAWLQEYQTEEKPTTATASTKS
Ga0193746_10038721	3300019870	Soil	RLFWCPVIKDDEYEMEQHYGHSGITMWKENMKWSAWLQDYPTAEQKPKTASASR
Ga0193700_10031993	3300019873	Soil	FWCPVIKDDEYEMEQHYGHSGITMWKENMKWSAWLQDYPTADQKPKTASASR
Ga0193722_11506561	3300019877	Soil	MEQHYGHSGITMWKENMKWSAWLQYYPTAEQKPKTASASR
Ga0193727_10239993	3300019886	Soil	VIKDDEYEMEQHYGHSGITMWKENMKWSAWLQDYPTAEQKPKTASASR
Ga0193728_12809742	3300019890	Soil	GHSGITMWKENMKWSAWLQDYPTAEQKPKTASASR
Ga0193757_10006061	3300020008	Soil	VIKDDEYEMEQHYGHSGITMWKENMKWSAWLQSSPTAEEKPKTASASR
Ga0210406_102440473	3300021168	Soil	FWCPVKKDDEYEVEQHYGHSGITVWKENMSWSVWLQEYQTAQQKPETAGTTR
Ga0222621_10048643	3300021510	Groundwater Sediment	EYEMEQHYGHSGITMWKENMKWSAWLQDYPTAEQKPKTASASR
Ga0126371_120184142	3300021560	Tropical Forest Soil	DDEYEVEQHYGHSGITVWKENMKWSAWLQDYETAEEKPKTASTSR
Ga0126371_122826932	3300021560	Tropical Forest Soil	AGRLFWCPVIKDDEYEVEQHYGHSGITVWKENMKWSAWLQDYETAEEKPKTASTSR
Ga0222622_109396601	3300022756	Groundwater Sediment	GRLFWCPVIKDDEYEMEQHYGHSGITMWKENMKWSAWLQSSPTAEEKPKTASASR
Ga0193714_10171621	3300023058	Soil	VIKDDEYEAEQHYGHSGITMWKENMKWSAWLQEYQSTEEKPKTATVSN
Ga0193714_10206661	3300023058	Soil	GRLFWCPVIKDYEYEKEQHYGHSGITMWKENMKWSAWLQSYSTAEEKPKTASASR
Ga0207697_101178441	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	AEQHHGHSGITMWRENMKWSAWLQTYPSAEEKRQTAEEKPQTASASR
Ga0207697_101992681	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	WCPVIKDYEYEKEQHYGHSGITMWKENMKWSAWLQSYETAEQKPQAASASR
Ga0207645_103323321	3300025907	Miscanthus Rhizosphere	PVIKDHEYEAEQHYGHSGITMWRENMKWSAWLQTYPSAEEKRQTAEEKSETASASR
Ga0207663_100415623	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MEQHYGHSGITMWKENMKWSAWLQSYRTAEQKPKTASASR
Ga0207706_115339872	3300025933	Corn Rhizosphere	YGHSGITVWKENMKWSAWLQDYETAEEKPKTASASR
Ga0207686_104904711	3300025934	Miscanthus Rhizosphere	YGHSGITMWKENMKWSAWLQSYQTAEQKPETASASR
Ga0207665_110176491	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	FWCPVVKDDEYEVEQHYGHSGITVWKENMKWSAWLQDYETAEEKPKTASASR
Ga0207668_101269911	3300025972	Switchgrass Rhizosphere	LFWCPVIEDYEYEKEQHYGHSGITMWKENMKWSAWLQSSPTAEEKPKTASASR
Ga0209265_11329662	3300026308	Soil	LFWCPVKKDDEYEVEQHYGHSGITMWRENTKWSAWLQEYQTAQQTPQTANALAPR
Ga0209239_12892261	3300026310	Grasslands Soil	VKKDDEYEVEQHFGHSGITMWRENMKWSAWLQYYETAEQKPKTASASR
Ga0209153_12989702	3300026312	Soil	VKKDDEYEVEQHYGHSGITMWKENTKWSAWLQEYQTAQQTPQTANALEPR
Ga0209472_12994122	3300026323	Soil	HFGHSGITMWRENMKWSAWLQYYETAEQKSKTASASR
Ga0209158_10670043	3300026333	Soil	FWCLVIKDDEYEAEQHYGHSGITMWRENMKWSAWLQEYQQESEQKPDTASASSVTR
Ga0209808_10457471	3300026523	Soil	YEMEQHYGHSGITMWKENMKWSAWLQSYSTAEQKPKTASATR
Ga0207510_1042482	3300026741	Soil	EAEQHYGHSGITMWRENMKWSAWLQTYPSAEEKRQTAEEKSETASASR
Ga0307282_103185171	3300028784	Soil	MEQHYGHSGITMWKENMKWSAWLQDYPTAEQKPKTASASR
Ga0307278_103223381	3300028878	Soil	KDDEYEMEQHYGHSGITMWKENMKWSAWLQYYRTAEEKPKTASASR
Ga0307308_100068348	3300028884	Soil	DDEYEVEQHYGHSGITVWKENMKWSAWLQEYQADDAAKSKTSTASR
Ga0075386_121345592	3300030916	Soil	HYGHSGITMWKENMKWSAWLQSSPTAEEKPKTASASR
Ga0075386_122149831	3300030916	Soil	RLFWCPVIKDDEYEKEQHYGHSGITMWKENMKWSAWLQSYSTAEQKPKTASASR
Ga0170819_133065251	3300031469	Forest Soil	EKEQHYGHSGITMWKENMKWSAWLQSYSTPEEKPKTASASR
Ga0170819_133856912	3300031469	Forest Soil	EKEQHYGHSGITMWKENMKWSAWLQSYSTPEEKPKTASAGR
Ga0306917_107623611	3300031719	Soil	RVKKDDEYEVEQHYGHSGITMWRENMKWSAWLQDYLTTEQKPNAASASR
Ga0310892_105376432	3300031858	Soil	FWCPVVKDDEYEMEQHYGHSGITMWKENMKWSAWLQHYPSADEKPNTASTSR
Ga0310892_107152421	3300031858	Soil	VIKDHEYEMEQHYGHSGITMWKENMKWSAWLQSYQTAEENPETASASR
Ga0306919_114108932	3300031879	Soil	GRLFWCPVVKDDEYEVEQHYGHSGITVWKENMKWSAWLQDYETAEEKPKTASASR
Ga0310893_102024701	3300031892	Soil	EMEQHYGHSGITMWKENMKWSAWLQHYPSADEKPNTASTSR
Ga0306921_112497073	3300031912	Soil	DDEYEAQQHYGHSGITMWRENMKWSAWLQEYQQESEQKPDTASASSVSR
Ga0308175_1009775852	3300031938	Soil	HRGHSGITMWKENMKWSAWLQDYPTAEQKPKTDSASR
Ga0310913_107817943	3300031945	Soil	DEYEMEQHYGHSGITMWRENMQWSAWLQDKDTADDNSKTSAASR
Ga0306922_111674781	3300032001	Soil	GRLFWCPVVKDDEYEVEQHYGHSGITVWKENMKWSAWLQDYESAEEKPKTASASR
Ga0268251_101178311	3300032159	Agave	DDEYEMEQHYGRSGITMWKENMKWSAWLQYYPTAEEKPKTASTSR
Ga0307471_1022559152	3300032180	Hardwood Forest Soil	GRLFWCPVIKDDEYEMEQHYGHSGITMWKENMKWSAWLQHYPSADEKPKTANASR
Ga0307472_1006015141	3300032205	Hardwood Forest Soil	AGRLFWCPVIKDDEYEMEQHYGHSGITMWKENMKWSAWLQSYSTDEEKPKTASASR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F046561

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences