Metagenome / Metatranscriptome Family F046959

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F046959
Family Type	Metagenome / Metatranscriptome
Number of Sequences	150
Average Sequence Length	40 residues
Representative Sequence	MELVQSRIVTDDVAGLAAFYARLVGTPVALNEYYVEV
Number of Associated Samples	130
Number of Associated Scaffolds	149

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	90.67 %
% of genes near scaffold ends (potentially truncated)	98.00 %
% of genes from short scaffolds (< 2000 bps)	94.67 %
Associated GOLD sequencing projects	128
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (30.000 % of family members)
Environment Ontology (ENVO)	Unclassified (31.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.46% β-sheet: 3.08% Coil/Unstructured: 78.46%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 149 Family Scaffolds
PF04542	Sigma70_r2	24.16
PF08281	Sigma70_r4_2	20.13
PF02627	CMD	12.08
PF13460	NAD_binding_10	1.34
PF07690	MFS_1	1.34
PF01061	ABC2_membrane	0.67
PF13561	adh_short_C2	0.67
PF13462	Thioredoxin_4	0.67
PF04075	F420H2_quin_red	0.67
PF07592	DDE_Tnp_ISAZ013	0.67

COG ID	Name	Functional Category	% Frequency in 149 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	24.16
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	24.16
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	24.16
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	24.16
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	12.08
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	12.08

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.00 %
Unclassified	root	N/A	14.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.00 %
Unclassified	root	N/A	14.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.00 %
Unclassified	root	N/A	14.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	47.33 %
Unclassified	root	N/A	14.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	46.00 %
Unclassified	root	N/A	14.00 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.67 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	34.67 %
Unclassified	root	N/A	14.00 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	22.67 %
Unclassified	root	N/A	14.00 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3.33 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.67 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.67 %

Name	Rank	Taxonomy	Distribution
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	22.67 %
Unclassified	root	N/A	14.00 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	3.33 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.67 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.00 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	10.00 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	3.33 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.67 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	0.67 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.00 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3.33 %
Mycobacterium nebraskense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium nebraskense	2.67 %
unclassified Polyangiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae	0.67 %
Mycolicibacterium moriokaense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium moriokaense	0.67 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.00 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3.33 %
Mycobacterium nebraskense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium nebraskense	2.67 %
Polyangiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	0.67 %
Mycolicibacterium moriokaense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium moriokaense	0.67 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2040502000\|ACOD_GAKN62C01EHV27	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
2189573001\|GZR05M101DB5OO	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	531	Open in IMG/M
3300000890\|JGI11643J12802_11314232	All Organisms → cellular organisms → Bacteria	1922	Open in IMG/M
3300005178\|Ga0066688_10219565	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300005436\|Ga0070713_101037808	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300005471\|Ga0070698_100579824	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300005530\|Ga0070679_101102833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	738	Open in IMG/M
3300005540\|Ga0066697_10079810	All Organisms → cellular organisms → Bacteria	1888	Open in IMG/M
3300005542\|Ga0070732_10141542	All Organisms → cellular organisms → Bacteria	1430	Open in IMG/M
3300005587\|Ga0066654_10042255	All Organisms → cellular organisms → Bacteria	1970	Open in IMG/M
3300005602\|Ga0070762_10952575	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300005713\|Ga0066905_100544148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	973	Open in IMG/M
3300005764\|Ga0066903_100762496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1721	Open in IMG/M
3300005764\|Ga0066903_102197636	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300005764\|Ga0066903_109006829	Not Available	505	Open in IMG/M
3300006028\|Ga0070717_10353900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium nebraskense	1313	Open in IMG/M
3300006028\|Ga0070717_11397635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium nebraskense	636	Open in IMG/M
3300006052\|Ga0075029_101131854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	545	Open in IMG/M
3300006059\|Ga0075017_100520632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	904	Open in IMG/M
3300006162\|Ga0075030_100252398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1414	Open in IMG/M
3300006755\|Ga0079222_11537121	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300006804\|Ga0079221_10171933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium nebraskense	1158	Open in IMG/M
3300006804\|Ga0079221_10893487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	651	Open in IMG/M
3300009038\|Ga0099829_11689736	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300009088\|Ga0099830_11435133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	574	Open in IMG/M
3300009521\|Ga0116222_1533252	All Organisms → cellular organisms → Bacteria → Terrabacteria group	515	Open in IMG/M
3300009525\|Ga0116220_10208335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	848	Open in IMG/M
3300009700\|Ga0116217_10639035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	661	Open in IMG/M
3300009824\|Ga0116219_10124408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1499	Open in IMG/M
3300010046\|Ga0126384_11669632	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300010048\|Ga0126373_11132165	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300010048\|Ga0126373_12074494	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300010337\|Ga0134062_10615629	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300010358\|Ga0126370_11333252	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300010359\|Ga0126376_11718554	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300010361\|Ga0126378_10699338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1125	Open in IMG/M
3300010361\|Ga0126378_10820952	Not Available	1039	Open in IMG/M
3300010361\|Ga0126378_12000084	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300010366\|Ga0126379_10875991	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300010376\|Ga0126381_102292913	All Organisms → cellular organisms → Bacteria → Terrabacteria group	775	Open in IMG/M
3300010398\|Ga0126383_10863279	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300011107\|Ga0151490_1349825	Not Available	518	Open in IMG/M
3300011271\|Ga0137393_10434640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1125	Open in IMG/M
3300012198\|Ga0137364_10521601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	894	Open in IMG/M
3300012285\|Ga0137370_10146561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1363	Open in IMG/M
3300012356\|Ga0137371_10889520	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300012362\|Ga0137361_11530399	Not Available	589	Open in IMG/M
3300012925\|Ga0137419_11165810	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300012971\|Ga0126369_12648444	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300012988\|Ga0164306_10152425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1577	Open in IMG/M
3300013104\|Ga0157370_11658369	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300013105\|Ga0157369_10735656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium nebraskense	1015	Open in IMG/M
3300014495\|Ga0182015_10794428	Not Available	594	Open in IMG/M
3300015052\|Ga0137411_1353103	All Organisms → cellular organisms → Bacteria	4899	Open in IMG/M
3300015356\|Ga0134073_10065683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1006	Open in IMG/M
3300015357\|Ga0134072_10122692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	825	Open in IMG/M
3300016294\|Ga0182041_11688607	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300016371\|Ga0182034_10328632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1235	Open in IMG/M
3300016371\|Ga0182034_10777775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	818	Open in IMG/M
3300016445\|Ga0182038_10959958	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300017821\|Ga0187812_1102262	Not Available	936	Open in IMG/M
3300017926\|Ga0187807_1176201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	688	Open in IMG/M
3300017942\|Ga0187808_10362085	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300017943\|Ga0187819_10725529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	560	Open in IMG/M
3300017961\|Ga0187778_10742005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	666	Open in IMG/M
3300017974\|Ga0187777_10977210	Not Available	612	Open in IMG/M
3300017975\|Ga0187782_10085335	All Organisms → cellular organisms → Bacteria	2315	Open in IMG/M
3300018060\|Ga0187765_11321739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	511	Open in IMG/M
3300018090\|Ga0187770_11614492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	529	Open in IMG/M
3300019786\|Ga0182025_1283074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1984	Open in IMG/M
3300020582\|Ga0210395_10258474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1309	Open in IMG/M
3300021402\|Ga0210385_10681769	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300021559\|Ga0210409_10349488	All Organisms → cellular organisms → Bacteria	1329	Open in IMG/M
3300024187\|Ga0247672_1011509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1404	Open in IMG/M
3300024249\|Ga0247676_1018145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1105	Open in IMG/M
3300025898\|Ga0207692_10607969	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300025910\|Ga0207684_10107098	All Organisms → cellular organisms → Bacteria	2391	Open in IMG/M
3300025910\|Ga0207684_11441477	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300025929\|Ga0207664_10523003	Not Available	1063	Open in IMG/M
3300026095\|Ga0207676_12140771	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300026310\|Ga0209239_1070530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium moriokaense	1527	Open in IMG/M
3300027671\|Ga0209588_1024156	All Organisms → cellular organisms → Bacteria	1918	Open in IMG/M
3300027775\|Ga0209177_10216483	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	690	Open in IMG/M
3300027846\|Ga0209180_10554701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	639	Open in IMG/M
3300027874\|Ga0209465_10513269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	598	Open in IMG/M
3300028906\|Ga0308309_11760488	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300029636\|Ga0222749_10286455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	848	Open in IMG/M
3300029882\|Ga0311368_10164574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1797	Open in IMG/M
3300029910\|Ga0311369_11394562	Not Available	531	Open in IMG/M
3300029999\|Ga0311339_10030336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7733	Open in IMG/M
3300030053\|Ga0302177_10499928	Not Available	628	Open in IMG/M
3300030490\|Ga0302184_10375337	Not Available	557	Open in IMG/M
3300030503\|Ga0311370_10288366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2133	Open in IMG/M
3300030520\|Ga0311372_12755813	Not Available	542	Open in IMG/M
3300030524\|Ga0311357_11050483	Not Available	713	Open in IMG/M
3300030618\|Ga0311354_10649439	Not Available	1017	Open in IMG/M
3300031234\|Ga0302325_10227600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3152	Open in IMG/M
3300031525\|Ga0302326_12801184	Not Available	602	Open in IMG/M
3300031543\|Ga0318516_10789325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	537	Open in IMG/M
3300031670\|Ga0307374_10001291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	46519	Open in IMG/M
3300031679\|Ga0318561_10107012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1475	Open in IMG/M
3300031679\|Ga0318561_10342887	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300031679\|Ga0318561_10804952	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300031681\|Ga0318572_10818137	Not Available	554	Open in IMG/M
3300031719\|Ga0306917_11585384	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300031724\|Ga0318500_10431804	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300031736\|Ga0318501_10330506	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300031736\|Ga0318501_10603935	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300031748\|Ga0318492_10334958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	791	Open in IMG/M
3300031751\|Ga0318494_10216474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1094	Open in IMG/M
3300031765\|Ga0318554_10049865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2289	Open in IMG/M
3300031765\|Ga0318554_10449697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	730	Open in IMG/M
3300031782\|Ga0318552_10157498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1142	Open in IMG/M
3300031793\|Ga0318548_10593225	Not Available	539	Open in IMG/M
3300031794\|Ga0318503_10094525	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300031795\|Ga0318557_10158599	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300031796\|Ga0318576_10254417	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300031819\|Ga0318568_11002901	Not Available	516	Open in IMG/M
3300031821\|Ga0318567_10480762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	705	Open in IMG/M
3300031821\|Ga0318567_10591060	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300031823\|Ga0307478_11667447	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300031831\|Ga0318564_10148492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1045	Open in IMG/M
3300031845\|Ga0318511_10435101	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300031846\|Ga0318512_10734506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	507	Open in IMG/M
3300031910\|Ga0306923_10698709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1129	Open in IMG/M
3300031912\|Ga0306921_11638399	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300031942\|Ga0310916_11070811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	671	Open in IMG/M
3300031981\|Ga0318531_10489474	Not Available	557	Open in IMG/M
3300031996\|Ga0308176_10751213	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300032009\|Ga0318563_10671167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	557	Open in IMG/M
3300032010\|Ga0318569_10449004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	601	Open in IMG/M
3300032052\|Ga0318506_10430488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	585	Open in IMG/M
3300032063\|Ga0318504_10434783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	627	Open in IMG/M
3300032066\|Ga0318514_10436995	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300032066\|Ga0318514_10497249	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300032089\|Ga0318525_10170385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1119	Open in IMG/M
3300032089\|Ga0318525_10170385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1119	Open in IMG/M
3300032089\|Ga0318525_10418355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	687	Open in IMG/M
3300032089\|Ga0318525_10473364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	641	Open in IMG/M
3300032090\|Ga0318518_10413469	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300032091\|Ga0318577_10084112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1475	Open in IMG/M
3300032261\|Ga0306920_101134402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1132	Open in IMG/M
3300032828\|Ga0335080_10424034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1424	Open in IMG/M
3300032892\|Ga0335081_11943903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	630	Open in IMG/M
3300032892\|Ga0335081_12209104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	579	Open in IMG/M
3300033134\|Ga0335073_11274261	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300033290\|Ga0318519_10057816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1965	Open in IMG/M
3300033290\|Ga0318519_10450633	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300033829\|Ga0334854_110694	Not Available	660	Open in IMG/M
3300034124\|Ga0370483_0324755	Not Available	532	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.33%
Host-Associated	Host-Associated	2.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.67%
Aquatic	Environmental → Aquatic	4.67%
Plants	Host-Associated → Plants	2.00%
Arthropoda	Host-Associated → Arthropoda	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.67%
Peat	Environmental → Terrestrial → Peat	8.00%
Freshwater	Environmental → Aquatic → Freshwater	2.67%
Sediment	Environmental → Aquatic → Sediment	2.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.33%
Symbiotic Fungal Gardens And Galleries	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries	0.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.33%
Loam	Environmental → Terrestrial → Soil → Loam	10.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.33%
Clay	Environmental → Terrestrial → Soil → Clay	0.67%
Fungus Garden	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries → Fungus Garden	0.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.67%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	36.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.33%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.00%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.33%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.67%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.67%
Unclassified	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries → Fungus Garden → Unclassified	0.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.33%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	7.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.67%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.33%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.67%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.67%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.67%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.00%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.67%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.67%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.67%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.67%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.67%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.67%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.67%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.67%
Fungus Garden	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries → Fungus Garden → Unclassified → Fungus Garden	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2040502000	Fungus garden microbial communities from Atta colombica in Panama - dump bottom	Host-Associated	Open in IMG/M
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024187	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13	Environmental	Open in IMG/M
3300024249	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ACODB_12666680	2040502000	Fungus Garden	MELVQARFVTDDVPGLAAFYARLVRTTAALNDYYV
FD2_08629880	2189573001	Grass Soil	MELVQSRIVTDDVARLAGFYARLLGVPVTLNDYYVELQAG
JGI11643J12802_113142321	3300000890	Soil	MEPSMNMRLVQARLVTDDVERVAAFYADMIGTPTTLNAYYVEVPA
Ga0066688_102195652	3300005178	Soil	MDLVQSRIVTDDVERLAAFYARLVRVSVVLNDYYVEVPTGAASV
Ga0070713_1010378082	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MELVQSRIVTDDVARLAGFYARLLGVPVTLNDYYVELQAGAAS
Ga0070698_1005798242	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MELVQCRIVTNDVEGLAAFYARLAGTPVTLNEYYVEVPAGAVSVGFS
Ga0070679_1011028332	3300005530	Corn Rhizosphere	MDLVQSRIITDDVARLAAFYAGLVRVSVVLNDYYVEVPAGA
Ga0066697_100798101	3300005540	Soil	MDLVQSRIVTDDVERLAAFYARLVRVSVVLNDYYVEVPTGAASVG
Ga0070732_101415421	3300005542	Surface Soil	MELVQSRIVTDDVGGLAGFYAKLLGVPTALNEYYVEI
Ga0066654_100422554	3300005587	Soil	VELVQARLVTDDVAGLAAFYAGLVGARVPLNEYYVEVPA
Ga0070762_109525752	3300005602	Soil	MELVQSRVVTDDVAGMATFYARLIGTSVIPNDYYVEVPTGGLSVGFS
Ga0066905_1005441482	3300005713	Tropical Forest Soil	MDLVQSRIVTDDVERLAAFYARLVRVSVVLNDYYVEV
Ga0066903_1007624964	3300005764	Tropical Forest Soil	VRLVQSRIVTDDVEGLAGFYADLLGAPVALNEYYVEI
Ga0066903_1021976361	3300005764	Tropical Forest Soil	MELVQARLVTDDVACLAEFYARLVGAKVALNEYYVEVPTCTASVG
Ga0066903_1090068291	3300005764	Tropical Forest Soil	VELVQARLVTDDVAGLAAFYAGLVQAEVPLNEYYVEVPAGP
Ga0070717_103539001	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MELVQGRIVTDDVEGLAAFYARLVGTPVALNEYYVEIPAG
Ga0070717_113976352	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MELVQSRIVTDGVARLAAFYARLINAEAVLNDYYVEVPTGAMSI
Ga0075029_1011318541	3300006052	Watersheds	MKLVQSRIVTNDVEGLAGFYARLLGVRVALNEYYVEIEAG
Ga0075017_1005206322	3300006059	Watersheds	MELVQSRIVTDDVAGLAAFYARLVGTPVALNEYYVEV
Ga0075030_1002523981	3300006162	Watersheds	MDLVDARLLTDDVARLAGFYGRILGTDVVVNEYYVELPTA
Ga0079222_115371211	3300006755	Agricultural Soil	MRLVQSRIVTDDVEGLAAFYARLLGISVALNEYYVEVPAGA
Ga0079221_101719333	3300006804	Agricultural Soil	MELVQARLVTDDVAGLAAFYAGLVRAEVPLNEYYVE
Ga0079221_108934872	3300006804	Agricultural Soil	MDLVQSRIVTDDVARLAAFYAGLVRVSVVLNDYYVEVPAG
Ga0099829_116897361	3300009038	Vadose Zone Soil	MELVQSRIVTDNVEGLAAFYARLVGTPVALNEYYVEVPAGP
Ga0099830_114351331	3300009088	Vadose Zone Soil	MDLVQSRIVTDDVERFAAFYARLVRVSVVLNDYYVEVP
Ga0116222_15332521	3300009521	Peatlands Soil	MELVQSRVVTDDVAGMAAFYATMVGATVVLNDYYVE
Ga0116220_102083351	3300009525	Peatlands Soil	MKLVQSRIVTDDVEGLAGFYARLLGVPVALNEYYVEIEAGPVLVG
Ga0116217_106390352	3300009700	Peatlands Soil	MKLVQSRIVTDDVEGLAGFYARLLGVPVALNEYYVE
Ga0116219_101244083	3300009824	Peatlands Soil	MKLVQSRIVTDDVEGLAGFYARLLGVPVALNEYYVEIEAGPVS
Ga0126384_116696321	3300010046	Tropical Forest Soil	MELVQTRIVTDDVQRLAAFYASLVRATVALNDYYV
Ga0126373_111321651	3300010048	Tropical Forest Soil	MELVQSRIVTDDVQGLAAFYARLVQAEVVLNDYYVEVPTG
Ga0126373_120744941	3300010048	Tropical Forest Soil	VKLVQARLVTDDVEALAAFYATLVEAEVALNEYYVEVPAGQATIGF
Ga0134062_106156292	3300010337	Grasslands Soil	MELIQSRIVTDDVEGLAAFYARLVGTPVALNEYYVEVPAGA
Ga0126370_113332522	3300010358	Tropical Forest Soil	VELVQARLVTEDVAGLAAFYAGLVGAKVPLNEYYVEVPAG
Ga0126376_117185541	3300010359	Tropical Forest Soil	MKLVQTRIVTDDVEGLAGFYASLVGTPVALNEYYVE
Ga0126378_106993381	3300010361	Tropical Forest Soil	VELVQSRLLTDDVERLAAFYATLLESPVALNGYYVEV
Ga0126378_108209522	3300010361	Tropical Forest Soil	MDLVQSRFVTDDVERLATFYARLVRFSVVLNDYYVEV
Ga0126378_120000842	3300010361	Tropical Forest Soil	VDLVQCRIVTDDVRRLAAFYSRLLDAQVVLNDYYVEIP
Ga0126379_108759911	3300010366	Tropical Forest Soil	MDLVQSRIVTDDVQRLAAFYASLVRTRVALNDYYVEVPAGPAS
Ga0126381_1022929131	3300010376	Tropical Forest Soil	MELVQSRIVTEDVERMATFYAALVEADVVINEYYVEIPTDGQRVGL
Ga0126383_108632792	3300010398	Tropical Forest Soil	MKLVQTRIVTDDVEGLAGFYASLVGTPVALNEYYVEVQAGPMSV
Ga0151490_13498252	3300011107	Soil	MELVQSRIVTDDVEGLAAFYARLVGTPVALNEYHVE
Ga0137393_104346401	3300011271	Vadose Zone Soil	MELVQSRIVTDDVAGLAAFYARLAGTPVALNEYYVE
Ga0137364_105216011	3300012198	Vadose Zone Soil	MDLVQSRIVTEDVERLAAFYARLVRVSVVLNDYYVEVPTGAASVG
Ga0137370_101465611	3300012285	Vadose Zone Soil	VELVQARLVTDDVAGLAAFYAGLVGARVPLNEYYV
Ga0137371_108895202	3300012356	Vadose Zone Soil	MELVRSRIVTDDVEGLAAFYSRLVGTPVALNEYYVEVP
Ga0137361_115303991	3300012362	Vadose Zone Soil	MELVQSRIVTDDVAGLAAFYPRLTGTPVALNEYYVEVPAGAVSVG
Ga0137419_111658101	3300012925	Vadose Zone Soil	MELVQSRIVTDDVAGLAAFYARLVGTPVALNEYYVEVPAGAL
Ga0126369_126484441	3300012971	Tropical Forest Soil	MELVQARLVTENVACLAEFYARLVSAKVALNEYYVEVPT
Ga0164306_101524251	3300012988	Soil	VQLPAEAGDMELVQARFVTDDVPGLAAFYARLVRTTTALNDYYVEVPAGPVSV
Ga0157370_116583691	3300013104	Corn Rhizosphere	MELVQSRIVTDDVEGLAAFYARLVGTPVALNEYYVE
Ga0157369_107356561	3300013105	Corn Rhizosphere	VQLPAEAGDMELVQARFVTDDVPGLAAFYARLVRTTAALNDYYVEVPAGPV
Ga0182015_107944282	3300014495	Palsa	MDLVQSRFVTDDVAQLATFYGRLIGTDVVLNDYYVELPT
Ga0137411_135310312	3300015052	Vadose Zone Soil	MRLAQARLVTDDVEGLAAFYARLVAADVPLNEYYVEIQAGPATI
Ga0134073_100656832	3300015356	Grasslands Soil	MDLVQSRIVTDDVERLAAFYARLVRAAVVLNDYYVEV
Ga0134072_101226921	3300015357	Grasslands Soil	MDLVQSRIVTDDVERLAAFYARLVRVSVVLNDYYVEVPTGAASIGFSR
Ga0182041_116886072	3300016294	Soil	VELVQARLVTENVAGLASFYTELVGATAPLNEYYVEVPAGP
Ga0182034_103286323	3300016371	Soil	MELVQCRMVTDDVAGLAGFYARLLDVPAALNEYYVEIEAGSA
Ga0182034_107777752	3300016371	Soil	MELVQSRFVTEDVGKLARFYAGLVGVDVVVNDYYVEVPTTAQR
Ga0182038_109599582	3300016445	Soil	MELVQCRMVTDDVAGLAGFYARLLDVPAALNEYYVE
Ga0187812_11022622	3300017821	Freshwater Sediment	MELVQSRVVTDDVAGLAGFYARLVGASVVLNDYYVEVP
Ga0187807_11762012	3300017926	Freshwater Sediment	MKLAQCRMVTDDVERLAGFYARLLGVPAALNEYYVEIQAGP
Ga0187808_103620851	3300017942	Freshwater Sediment	VELVQTRILTDDVERLATFYATLVGTQVALNEYYVEVP
Ga0187819_107255291	3300017943	Freshwater Sediment	MELVQSRVVTDDVAGLAGFYARLVGASVVLNDYYVEVPTGG
Ga0187778_107420051	3300017961	Tropical Peatland	MKLVQSRIVTDDVERLAGFYARLLGVPAALNEYYVEIEAGPASIGFSR
Ga0187777_109772101	3300017974	Tropical Peatland	MELVQSRIVTNNIERLAAFHAQLAGVPMALNEYNVEVHAGPTSVGLSKR
Ga0187782_100853351	3300017975	Tropical Peatland	MDLVQCRMVSDDVEGLARFYARLLGVPAALNEFYVEIQ
Ga0187765_113217391	3300018060	Tropical Peatland	MDLVQSRIVTDDVERLAAFYARLVGVSVVLNDYYIEGAHRNGL
Ga0187770_116144921	3300018090	Tropical Peatland	MELVQCRIVTDDVESLAGFYARLLEVPAALNEYYVE
Ga0182025_12830743	3300019786	Permafrost	VDLVQSRFVTDDVAQLATFYGRLIETDVVLNDYYVEVPTGV
Ga0210395_102584742	3300020582	Soil	MDLVQSRIVTDDVERLAAFYARLVRVAVVLNDYYVEVPTGAASV
Ga0210385_106817691	3300021402	Soil	MELVQSRIVTDDVEGLAGFYAKLLGVPTALNEYYVEIA
Ga0210409_103494883	3300021559	Soil	MDLVQCRIVTHDVAGLAGFYASLLGAPTALNDYYVEIQAGPASLGFS
Ga0247672_10115091	3300024187	Soil	MELVQARFVTDDVPGLAAFYARLVRAPAVLNDYYVEVQAGPASVG
Ga0247676_10181453	3300024249	Soil	MELVQARFVTDDVPGLAAFYARLVRAPAVLNDYYVEVQ
Ga0207692_106079692	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MELVQARFVTDDVPGLAAFYARLVRTTTALNDYYVEVPAGPVRTRR
Ga0207684_101070981	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MELVQGRIVTDDVEGLAAFYARLVGTPVALNEYYV
Ga0207684_114414772	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MELVQARFVTDDVPGLAAFYARLVRAPAVLNDYYVE
Ga0207664_105230032	3300025929	Agricultural Soil	MDLVQSRIITDDVARLAAFYAGLVRVSVVLNDYYVE
Ga0207676_121407711	3300026095	Switchgrass Rhizosphere	MELVQGRIVTDDVEGLAAFYARLVGTPVALNEYYVEVPA
Ga0209239_10705301	3300026310	Grasslands Soil	MELIQSRIVTDDVEGLAAFYARLVGTPVALNEYYVEVPA
Ga0209588_10241563	3300027671	Vadose Zone Soil	MELVQSRIVTDDVAGPAAFYARLTGTPVALNEYYVEVPAGAVSVG
Ga0209177_102164832	3300027775	Agricultural Soil	MDLVQSRIVTDDVQRLAAFYARLVRTPVVLNDYYVEVPTGAMTV
Ga0209180_105547011	3300027846	Vadose Zone Soil	MKLVQSRIVTDDVEGLAGFYARLLGVPVALNEYYV
Ga0209465_105132692	3300027874	Tropical Forest Soil	MELVQARLVTDDVMGLAAFYAKLVRAEVALNEYYVEVPAGAA
Ga0308309_117604881	3300028906	Soil	MELVQSRIVTDDVAGLAAFYARLVGTPVTLNDYYVEV
Ga0222749_102864552	3300029636	Soil	MELVQSRIVTDAVEKMATFYGALVGVSVIPNEYYVE
Ga0311368_101645743	3300029882	Palsa	VDLVQSRFVTDDVAQLATFYGRLIGTDVVLNDYYIEVPTGGLSIA
Ga0311369_113945621	3300029910	Palsa	VDLVQSRFVTDDVAQLATFYGRLIGTDVVLNDYYVEVPTGGLSVAFSKC
Ga0311339_100303361	3300029999	Palsa	VDLVQSRFVTDDVAQLATFYGRLIGTNVVLNDYYV
Ga0302177_104999281	3300030053	Palsa	VHLVQSRFVTDDVAQLAAFYGRLIGTDVVLNDYYVEVP
Ga0302184_103753371	3300030490	Palsa	VDLVQSRFVTDDVAQLATFYGRLIGTNVVLNDYYVEV
Ga0311370_102883664	3300030503	Palsa	VDLVQSRFVTDDVAQLATFYGRLIGTDVVLNDYYI
Ga0311372_127558131	3300030520	Palsa	VDLVQSRFVTDDVAQLATFYGRLIGTDVVLNDFYIEVPTGG
Ga0311357_110504832	3300030524	Palsa	VDLVQSRFVTDDVAQLATFYGRLIGTDVVLNDYYVEVPTGGLSVAF
Ga0311354_106494393	3300030618	Palsa	VDLVQSRFVTDDVAQLATFYGRLIGTNVVLNDYYVEVPT
Ga0302325_102276005	3300031234	Palsa	VDLVQSRFVTDDVAQQATFYGRLIGTNVVLNDYNVEVP
Ga0302326_128011842	3300031525	Palsa	VDLVQSRFVTDDVAQLATFYGRLIGTDVVLNDYYIEVP
Ga0318516_107893252	3300031543	Soil	MRLVQSRIVTDDVEGLAAFYARLLGASVALNEYYVEVPAGAVTVG
Ga0307374_1000129141	3300031670	Soil	MELVQSRVVTDDVAALADFYARLIGVAVVLNDYYVEVSAGEWVLKPTN
Ga0318561_101070121	3300031679	Soil	VELVQARLVTEDVAGLAAFYAGLVQVTVPLNEYYVEVPA
Ga0318561_103428871	3300031679	Soil	MELVQSRIVTDHVQRLAAFYARLVQAKVVLNDYYVEVPTG
Ga0318561_108049522	3300031679	Soil	MELVQCRMVTDDVAGLAGFYARLLDVPAALNEYYVEIEAGPASV
Ga0318572_108181371	3300031681	Soil	MELVQSRIVTDDVQRLAAFYASLVRAKVALNDYYVEVPAG
Ga0306917_115853841	3300031719	Soil	MRLVQSRIVTDDVEGLAAFYARLLGASVALNEYYVEVPA
Ga0318500_104318042	3300031724	Soil	VELVQARLVTENVAGLASFYTELVGATVPLNEYYV
Ga0318501_103305061	3300031736	Soil	VELVQARLVTENVAGLASFYTELVGATVPLNEYYVEVPAGPG
Ga0318501_106039352	3300031736	Soil	VELVQARLVTEDVAGLAAFYAGLVKVKVPLNEYYVEVPAGPA
Ga0318492_103349581	3300031748	Soil	MKLVQSRIVTDDVEGLAGFYARLLGVPVALNEYYVEI
Ga0318494_102164741	3300031751	Soil	VELVQARLVTEDVAGLAAFYAELVGARVPLNEYYVEVPAG
Ga0318554_100498651	3300031765	Soil	MELVQCRMVTDDVAGLAGFYARLLDVPAALNEYYV
Ga0318554_104496971	3300031765	Soil	MITDDVAGLAAFYAHLTRADVTLNDYYVEVPAGPASIGFSRPRF
Ga0318552_101574983	3300031782	Soil	MRLVQSRIVTDDVGGLAAFYASLLGVSVPLNEYYVEV
Ga0318548_105932252	3300031793	Soil	MDLAQCRMVTDDVEGLAGFYARLLGVPTALNEYYVEI
Ga0318503_100945253	3300031794	Soil	MELVQSRIVTDHVQRLAAFYARLVQAKVVLNDYYVEVPTGAASVGF
Ga0318557_101585993	3300031795	Soil	VELVQARLVTENVAGLASFYTELVGATVPLNEYYVEVPAG
Ga0318576_102544172	3300031796	Soil	MELVQSRIVTDDVQRLAAFYASLVRAKVALNDYYVEVP
Ga0318568_110029012	3300031819	Soil	VELVQARLVTEDVAGLAAFYAELVGARVPLNEYYVE
Ga0318567_104807621	3300031821	Soil	MELVQSRLVTDDVAGLACFYAALLDVRVVPNDYYVEVA
Ga0318567_105910601	3300031821	Soil	MDLAQCRMVTDDVEGLAGFYARLLGVPTALNEYYVEIQAGPSTSS
Ga0307478_116674472	3300031823	Hardwood Forest Soil	MELVQSRIVTDDVVRLAGFYARLLGVPITLNDYYVEVQAGPAS
Ga0318564_101484923	3300031831	Soil	MELTQSRIVTDDVQRLAAFYASLVRTRVALNDYYVEVPA
Ga0318511_104351011	3300031845	Soil	VELVQARLVTEDVAGLAAFYAGMIGEKVPLNEYYVEVPAG
Ga0318512_107345062	3300031846	Soil	MDLVQSRIVTDDVAPLAAFYARLVRVPVVLNDYYVEV
Ga0306923_106987091	3300031910	Soil	VDLAQCRMVTDDVEGLAGFYARLLGVPTALNEYYVEIQAGPA
Ga0306921_116383991	3300031912	Soil	MDLAQCRMVTDDVEGLAGFYARLLGVPTALNEYYVEIQA
Ga0310916_110708111	3300031942	Soil	MRLVQSRIVTDDVEGLAGFYADLLGAPVALNGYYVEIQAGEA
Ga0318531_104894742	3300031981	Soil	MELTQSRIVTDDVQRLAAFYASLVRAKVALNDYYVE
Ga0308176_107512132	3300031996	Soil	MELAQARIVTDNVEALAGFYAALVGTPVALNEYYVEVP
Ga0318563_106711672	3300032009	Soil	MDLVQSRIVTDDVAPLAAFYARLVRVPVVLNDYYVE
Ga0318569_104490042	3300032010	Soil	MDLVQSRIVTDDVARLAAFYARLVRVPVVLNDYYVEV
Ga0318506_104304881	3300032052	Soil	MITDDVAGLAAFYARLTRADVTLNEYYVEVPAGPASIGFSR
Ga0318504_104347831	3300032063	Soil	MITDDVAGLAAFYAHLTRADVTLNDYYVEVPAGPAS
Ga0318514_104369952	3300032066	Soil	MMRLAQCRIVTGDVQALAGFYARLIGVPVTLNDYY
Ga0318514_104972492	3300032066	Soil	MRLVQARIVTDDVAGLAAFYAGLLRADVALNDYYGEVPAGPA
Ga0318525_101703852	3300032089	Soil	MKLVQSRIVTEDVEGLAGFYARLLGVPVALNEYYVEIEAGPASIST
Ga0318525_101703853	3300032089	Soil	KLVQSRIVTDDVERLAGFYARLLGVPVALNEYYVEIEAGPASIST
Ga0318525_104183552	3300032089	Soil	MELVQSRLVTDDVAGLACFYAALLDAHVVSNDYYVEVA
Ga0318525_104733642	3300032089	Soil	MKLVQSRIVTDDVERLAGFYARLLGVPVALNEYYVEIEAGPASV
Ga0318518_104134691	3300032090	Soil	MELQQCRIVTDDVAGLAGFYARLLGVPTALNEYYVEIQAG
Ga0318577_100841123	3300032091	Soil	VELVQARLVTDDVAGLAAFYAGLVQAEVPLNEYYVEVPAGPM
Ga0306920_1011344021	3300032261	Soil	MELVQCRMVTDDVAGLAGFYARLLDVPAALNEYYVEI
Ga0335080_104240341	3300032828	Soil	MDLVQSRIVTDDVQRLAAFYARLVRVSVVLNDYYVEVPTGAA
Ga0335081_119439031	3300032892	Soil	MKLVQSRIVTDDVEGLAGFYARLLGVPVALNEYYVEIEAG
Ga0335081_122091041	3300032892	Soil	MDLGQIRIVTGDVERLAAFYARLVRVSVVLNDYYVEVPTGVASV
Ga0335073_112742611	3300033134	Soil	MKLVQSRIVTDDVEGLAGFYARLLGVPVTLNEYYVEIEAG
Ga0318519_100578163	3300033290	Soil	MRLVQSRIVTDDVEGLAAFYASLLAVSVTLNDYYVEVPAG
Ga0318519_104506332	3300033290	Soil	VDLAQCRMVTDDVEGLAGFYARLLGVPTALNEYYVEIQ
Ga0334854_110694_1_144	3300033829	Soil	MDLVQSRFVTDDVAQLATFYGRLIGTDVVLNDYYVEVPTGGLSVAFSK
Ga0370483_0324755_408_530	3300034124	Untreated Peat Soil	MDLVQSRFVTDDVAQLATFYGQLIGTSVVLNDYYVEVPTGG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F046959

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences