Metagenome / Metatranscriptome Family F047297

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F047297
Family Type	Metagenome / Metatranscriptome
Number of Sequences	150
Average Sequence Length	85 residues
Representative Sequence	MDVYLRPDLHSKAPATAREEPYTPVFTGSPVEVAAYLGPRMEQRTHTLALVAAELKHLSRAGWATDHLTFVLVDETSVTVRP
Number of Associated Samples	111
Number of Associated Scaffolds	150

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	13.33 %
% of genes near scaffold ends (potentially truncated)	45.33 %
% of genes from short scaffolds (< 2000 bps)	94.00 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (63.333 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil (7.333 % of family members)
Environment Ontology (ENVO)	Unclassified (43.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (64.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.73% β-sheet: 16.36% Coil/Unstructured: 60.91%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 150 Family Scaffolds
PF00313	CSD	48.67
PF03459	TOBE	36.67
PF01116	F_bP_aldolase	2.00
PF00571	CBS	2.00
PF00582	Usp	1.33
PF03551	PadR	1.33
PF10415	FumaraseC_C	0.67
PF01435	Peptidase_M48	0.67
PF00171	Aldedh	0.67
PF02667	SCFA_trans	0.67

COG ID	Name	Functional Category	% Frequency in 150 Family Scaffolds
COG0191	Fructose/tagatose bisphosphate aldolase	Carbohydrate transport and metabolism [G]	2.00
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	1.33
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.33
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	1.33
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.67
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.67
COG2031	Short chain fatty acids transporter	Lipid transport and metabolism [I]	0.67
COG2978	p-Aminobenzoyl-glutamate transporter AbgT	Coenzyme transport and metabolism [H]	0.67
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.67

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.33 %
Unclassified	root	N/A	36.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.33 %
Unclassified	root	N/A	36.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.33 %
Unclassified	root	N/A	36.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.67 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	30.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.67 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	30.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.33 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.67 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	26.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.33 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.67 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.67 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	26.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.33 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.67 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.67 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	18.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.33 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.67 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.67 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	18.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.33 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.67 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.67 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	4.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.33 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.67 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001205\|C688J13580_1015936	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300001305\|C688J14111_10055442	All Organisms → cellular organisms → Bacteria	1197	Open in IMG/M
3300002568\|C688J35102_118221748	Not Available	540	Open in IMG/M
3300002568\|C688J35102_118925135	Not Available	614	Open in IMG/M
3300002568\|C688J35102_119300697	Not Available	670	Open in IMG/M
3300002568\|C688J35102_120020908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	849	Open in IMG/M
3300002568\|C688J35102_120367826	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300002568\|C688J35102_120801758	All Organisms → cellular organisms → Bacteria	1623	Open in IMG/M
3300002568\|C688J35102_120863328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1881	Open in IMG/M
3300003579\|Ga0007429J51699_1022838	Not Available	560	Open in IMG/M
3300004081\|Ga0063454_101324608	Not Available	605	Open in IMG/M
3300004153\|Ga0063455_101418888	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300004157\|Ga0062590_100370952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1157	Open in IMG/M
3300004463\|Ga0063356_103494161	Not Available	677	Open in IMG/M
3300004463\|Ga0063356_105537966	Not Available	542	Open in IMG/M
3300004643\|Ga0062591_102223962	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300004801\|Ga0058860_10048246	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300005327\|Ga0070658_10761475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	841	Open in IMG/M
3300005328\|Ga0070676_10368291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	992	Open in IMG/M
3300005329\|Ga0070683_101049529	Not Available	782	Open in IMG/M
3300005329\|Ga0070683_101804572	Not Available	588	Open in IMG/M
3300005330\|Ga0070690_100480998	Not Available	926	Open in IMG/M
3300005332\|Ga0066388_100966685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1420	Open in IMG/M
3300005332\|Ga0066388_108362820	Not Available	516	Open in IMG/M
3300005332\|Ga0066388_108710957	Not Available	504	Open in IMG/M
3300005334\|Ga0068869_100389681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1144	Open in IMG/M
3300005334\|Ga0068869_101531330	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300005335\|Ga0070666_10300507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1143	Open in IMG/M
3300005337\|Ga0070682_101087935	Not Available	669	Open in IMG/M
3300005338\|Ga0068868_102026951	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300005339\|Ga0070660_101533294	Not Available	567	Open in IMG/M
3300005344\|Ga0070661_100461148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1012	Open in IMG/M
3300005347\|Ga0070668_100967165	Not Available	764	Open in IMG/M
3300005364\|Ga0070673_101352358	Not Available	670	Open in IMG/M
3300005406\|Ga0070703_10572356	Not Available	518	Open in IMG/M
3300005435\|Ga0070714_102146724	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300005438\|Ga0070701_11370613	Not Available	507	Open in IMG/M
3300005444\|Ga0070694_100449770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1017	Open in IMG/M
3300005456\|Ga0070678_100725928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	897	Open in IMG/M
3300005458\|Ga0070681_10675839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	948	Open in IMG/M
3300005466\|Ga0070685_10193784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1317	Open in IMG/M
3300005543\|Ga0070672_100086805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2517	Open in IMG/M
3300005548\|Ga0070665_101682367	Not Available	642	Open in IMG/M
3300005616\|Ga0068852_101559823	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300005618\|Ga0068864_100218552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1757	Open in IMG/M
3300005718\|Ga0068866_10507850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	799	Open in IMG/M
3300005719\|Ga0068861_100215893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1618	Open in IMG/M
3300005840\|Ga0068870_11355835	Not Available	520	Open in IMG/M
3300005842\|Ga0068858_101182157	Not Available	752	Open in IMG/M
3300005843\|Ga0068860_100719326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1009	Open in IMG/M
3300005843\|Ga0068860_102574806	Not Available	528	Open in IMG/M
3300006169\|Ga0082029_1614430	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300009094\|Ga0111539_13550207	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300009098\|Ga0105245_10068202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3222	Open in IMG/M
3300009148\|Ga0105243_10855315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	901	Open in IMG/M
3300009148\|Ga0105243_11197597	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300009177\|Ga0105248_10527216	All Organisms → cellular organisms → Bacteria	1332	Open in IMG/M
3300009545\|Ga0105237_11473880	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300009553\|Ga0105249_11371451	Not Available	779	Open in IMG/M
3300009789\|Ga0126307_10638510	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300010038\|Ga0126315_10282830	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300010039\|Ga0126309_10007032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4450	Open in IMG/M
3300010041\|Ga0126312_10255099	All Organisms → cellular organisms → Bacteria	1232	Open in IMG/M
3300010041\|Ga0126312_10704648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	729	Open in IMG/M
3300010041\|Ga0126312_11295250	Not Available	539	Open in IMG/M
3300010359\|Ga0126376_12770952	Not Available	540	Open in IMG/M
3300010397\|Ga0134124_13170758	Not Available	504	Open in IMG/M
3300010400\|Ga0134122_13397174	Not Available	501	Open in IMG/M
3300012212\|Ga0150985_105022085	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300012212\|Ga0150985_105658536	Not Available	922	Open in IMG/M
3300012212\|Ga0150985_107505529	Not Available	1028	Open in IMG/M
3300012212\|Ga0150985_109075042	Not Available	525	Open in IMG/M
3300012212\|Ga0150985_111878633	All Organisms → cellular organisms → Bacteria	1213	Open in IMG/M
3300012212\|Ga0150985_113495655	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300012212\|Ga0150985_113500316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	783	Open in IMG/M
3300012212\|Ga0150985_119430016	Not Available	513	Open in IMG/M
3300012469\|Ga0150984_103227704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	764	Open in IMG/M
3300012469\|Ga0150984_103979930	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300012469\|Ga0150984_106010583	Not Available	517	Open in IMG/M
3300012469\|Ga0150984_106724910	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300012469\|Ga0150984_110908318	Not Available	579	Open in IMG/M
3300012469\|Ga0150984_112212926	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300012469\|Ga0150984_112488342	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300012469\|Ga0150984_115503040	Not Available	607	Open in IMG/M
3300012469\|Ga0150984_121816844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	661	Open in IMG/M
3300012469\|Ga0150984_121824341	Not Available	695	Open in IMG/M
3300012951\|Ga0164300_10493115	Not Available	698	Open in IMG/M
3300012955\|Ga0164298_10124102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1408	Open in IMG/M
3300012958\|Ga0164299_10407889	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300012960\|Ga0164301_10778338	Not Available	729	Open in IMG/M
3300012961\|Ga0164302_10130755	All Organisms → cellular organisms → Bacteria → Proteobacteria	1445	Open in IMG/M
3300012988\|Ga0164306_10615587	All Organisms → cellular organisms → Bacteria → Proteobacteria	852	Open in IMG/M
3300012989\|Ga0164305_10017529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	3649	Open in IMG/M
3300013297\|Ga0157378_10890071	Not Available	920	Open in IMG/M
3300013306\|Ga0163162_12223817	Not Available	630	Open in IMG/M
3300013307\|Ga0157372_12055738	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300014326\|Ga0157380_13082632	Not Available	531	Open in IMG/M
3300014488\|Ga0182001_10481333	Not Available	565	Open in IMG/M
3300014745\|Ga0157377_10611374	Not Available	779	Open in IMG/M
3300015371\|Ga0132258_10905473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2227	Open in IMG/M
3300015371\|Ga0132258_12697163	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300015372\|Ga0132256_100230205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1913	Open in IMG/M
3300015373\|Ga0132257_101509305	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300017792\|Ga0163161_11363649	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300019356\|Ga0173481_10315938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	732	Open in IMG/M
3300020070\|Ga0206356_10560433	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300020078\|Ga0206352_10649167	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300020081\|Ga0206354_11360663	Not Available	591	Open in IMG/M
3300024055\|Ga0247794_10054922	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300024430\|Ga0196962_10077035	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300025321\|Ga0207656_10116698	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300025899\|Ga0207642_10269909	Not Available	974	Open in IMG/M
3300025900\|Ga0207710_10154224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1116	Open in IMG/M
3300025901\|Ga0207688_10657909	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300025911\|Ga0207654_10641993	Not Available	760	Open in IMG/M
3300025914\|Ga0207671_10245178	All Organisms → cellular organisms → Bacteria	1408	Open in IMG/M
3300025918\|Ga0207662_10067848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2152	Open in IMG/M
3300025920\|Ga0207649_10724689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	772	Open in IMG/M
3300025920\|Ga0207649_11196675	Not Available	600	Open in IMG/M
3300025925\|Ga0207650_11352186	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300025931\|Ga0207644_11278750	Not Available	617	Open in IMG/M
3300025934\|Ga0207686_11141392	Not Available	636	Open in IMG/M
3300025935\|Ga0207709_11670851	Not Available	529	Open in IMG/M
3300025939\|Ga0207665_10437545	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300025940\|Ga0207691_10101317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2570	Open in IMG/M
3300025942\|Ga0207689_10945841	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300025944\|Ga0207661_10806025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	864	Open in IMG/M
3300025945\|Ga0207679_10307592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1368	Open in IMG/M
3300025945\|Ga0207679_10440638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1153	Open in IMG/M
3300025981\|Ga0207640_11538903	Not Available	598	Open in IMG/M
3300026035\|Ga0207703_10400213	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300026035\|Ga0207703_10959335	Not Available	820	Open in IMG/M
3300026078\|Ga0207702_10520066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1162	Open in IMG/M
3300026121\|Ga0207683_10054681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	3500	Open in IMG/M
3300028589\|Ga0247818_10594241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	761	Open in IMG/M
3300028592\|Ga0247822_11813336	Not Available	521	Open in IMG/M
3300028592\|Ga0247822_11919813	Not Available	507	Open in IMG/M
3300028596\|Ga0247821_10960025	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300028705\|Ga0307276_10048071	Not Available	937	Open in IMG/M
3300030336\|Ga0247826_11787069	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300031152\|Ga0307501_10006808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1742	Open in IMG/M
3300031548\|Ga0307408_100594024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	983	Open in IMG/M
3300031548\|Ga0307408_101650479	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300031908\|Ga0310900_10256285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1263	Open in IMG/M
3300031995\|Ga0307409_101557354	Not Available	689	Open in IMG/M
3300032002\|Ga0307416_100806097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1035	Open in IMG/M
3300032002\|Ga0307416_101691876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	737	Open in IMG/M
3300032075\|Ga0310890_11710009	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300034268\|Ga0372943_0054746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	2239	Open in IMG/M
3300034268\|Ga0372943_0072805	All Organisms → cellular organisms → Bacteria	1968	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	57.33%
Environmental	Environmental	42.67%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	56.67%
Terrestrial	Environmental → Terrestrial	42.67%
Human	Host-Associated → Human	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	42.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	32.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	24.67%
Digestive System	Host-Associated → Human → Digestive System	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	24.00%
Loam	Environmental → Terrestrial → Soil → Loam	18.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	18.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	15.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	8.00%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.33%
Sand	Environmental → Terrestrial → Soil → Sand	0.67%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	18.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	15.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	8.00%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	7.33%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.33%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.67%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	7.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.67%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	6.67%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	6.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.67%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.00%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.00%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.00%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.00%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.33%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.67%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.67%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.67%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001205	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003579	Grassland soil microbial communities from Hopland, California, USA - Sample H4_Rhizo_45 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300024430	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J13580_10159363	3300001205	Soil	MNVFSRPDLYSQAPPSARQEPDAPVFSGTPSQVAAFLGPRMERRTHTLALVTAELSHLDRAGWETDSLTFVLTD
C688J14111_100554423	3300001305	Soil	MPTMQGMNVFSRPDLYSQAPPSARQEPDAPVFSGTPSQVAAFLGPRMERRTHTLALVTAELSHLERAGWETDSLTFVLTDETSVTVRP*
C688J35102_1182217481	3300002568	Soil	MPTPIPMDVFARPDLYSQAPPTSRQEPDAPVFSGSPNQVAEFLGPRMPQRTHTLALVSAELSHLDRAGWPTDSLTFVLTDETSVTVRP*
C688J35102_1189251351	3300002568	Soil	MNVFSRPDLYSQAPPSARQEPDAPLFSGTPVQVAAFLGPRMERRTHTLALVTAELSHLERAGWETDSLTFVLTDETSVTVRP*
C688J35102_1193006971	3300002568	Soil	VPNVGVMNVFLRPDLHSRAPATSREEPKEPVFTGSPTEVAAFLGPRMEQRTHTLTLVAAELKHLARAGWATDHLTFVLQDDTSVTVRP*
C688J35102_1200209082	3300002568	Soil	MEIFTRPDLYSKAPPTARQEPTRPLFTGSPTQVAAFLGPRMAQRTHTIALVTAELAHLARAGWPNDSLTFVLADDSSVTVRP*
C688J35102_1203678263	3300002568	Soil	MNVFTRPDLYSQAPKSARQERDAPVFTGTADQVAAFLGPRMEQRTHTLALVTAELANLARAGWETDSLTFVLRDETSVTVRP*
C688J35102_1208017583	3300002568	Soil	MEVFIRPDIYSQAPATARQEPGAPVFSGTPAQVAEYLGPRMEQRTHTLALVRAELTHLARDGWPSDSLTFVLADDTSVTVRP*
C688J35102_1208633282	3300002568	Soil	MNVFTRPDLHSQAPPTARQEPDGPVFSGSPAQVASFLGQRMAQRTHTLALVTAELSHLAHAGWATDSLTFVLTDDSSVTVRP*
Ga0007429J51699_10228381	3300003579	Avena Fatua Rhizosphere	DLYSQAPPSARQEPDAPVFSGTPSQVAAFLGPRMERRTHTLALVTAELSHLERAGWETDSLTFVLTDETSVTVRP*
Ga0063454_1013246081	3300004081	Soil	MHVFPRPDLYSQAPPTARQEPTGPVFSGTPHQVAEFLGPRMETRTHTLALVTAELTHLARAGWATDSLTFVLADETSVTVRP*
Ga0063455_1014188882	3300004153	Soil	MDVYTRPDLYSQAPRTARQEPQPPVFTGTPSQVADFVGSQMSTRTHTLALMAGELSHLARAGWPTDSLTFVLADDTS
Ga0062590_1003709522	3300004157	Soil	MNVFLRPDLHSKAPATSREEPGDPVFSGSPTEVAAFLGSKMEQRTHTLTLVAAELKHLARAGWATDHLTFVLQDDTSVTVRP*
Ga0063356_1034941611	3300004463	Arabidopsis Thaliana Rhizosphere	MDVYLRPDVHSKAPATAREEPDNPVFTGSPTEVAAYLGTRMEQRTHTLTLVAAELKHLSRAGWATDHLTFVLVDETSVTVRP*
Ga0063356_1055379661	3300004463	Arabidopsis Thaliana Rhizosphere	VPNEGVMDIFLRPDLHSRAPATSREEPAEPVFSGSPTEVAAYLGPRMEQRTHTLTLVAAELKHLARAGWATDHLTFVLQDDTSVTVRP*
Ga0062591_1022239621	3300004643	Soil	MSLMEVFPRPDLYSQAPPTARQEPTGPVFTGTPDQVAEFLGTRMEQRTHTIALVLGELTHLARAGWATDSLTFVLSDETSVTV
Ga0058860_100482461	3300004801	Host-Associated	MDVYLRPDLHSKAPATAREEPYTPVFTGSPVEVAAYLGPRMEQRTHTLALVAAELNHLSRAGWATDHLTFVLVDETSVTVRP
Ga0070658_107614753	3300005327	Corn Rhizosphere	SKAPATAREEPYTPVFTGSAIEVAAYLGPRMEQRTHTLALVAAELNHLSRAGWATDHLTFVLVDETSVTVRP*
Ga0070676_103682912	3300005328	Miscanthus Rhizosphere	MDVYLRPDVHSKAPATAREEPYSPVFTGSAIEVAGYLGTRMEQRTHTLALVAAELKHLSRAGWATDHLTFVLVDETSVTVRP*
Ga0070683_1010495292	3300005329	Corn Rhizosphere	MNVFLRPDLHSKAPATSREEPGDPVFSGSPTEVAAFLGPKMEQRTHTLTLVAAELKHLARAGWATDHLTFVLQDDTSVTVRP*
Ga0070683_1018045721	3300005329	Corn Rhizosphere	VRDLPKDDHMDVYLRPDLHSKAPATAREEPYTPVFTGSPVEVAAYLGPRMEQRTHTLALVAAELNHLSRAGWATDHLTFVLVDETSVTVRP*
Ga0070690_1004809982	3300005330	Switchgrass Rhizosphere	MDVYLRPDLHSKAPATAREEPYTPVFTGSPVEVAAYLGPRMEQRTHTLALVAAELNHLSRAGWATDHLTFVLVDETSVTVRP*
Ga0066388_1009666853	3300005332	Tropical Forest Soil	MSEMEVFARPDLFSKAPDTARQEPKPPVFCGSPTQVAAYLGPRMEQRTHTLALVTAELRHLERAGWATDSLTFVLSDETSVTVRP*
Ga0066388_1083628201	3300005332	Tropical Forest Soil	MEVFSRPDLFSKAPETSRQEPKPPVFCGSPMQVAQYLGPRMEQRTHTLALVTAELQHLARSGWPTDSLTFVLTDETSVTVRP*
Ga0066388_1087109571	3300005332	Tropical Forest Soil	MSYMDVFLRPDLHSKAPATAREEPDNPVFTGSPNEVAAYLGPRMEQRTHTLSLVAAELKHLARAGWPTDHLTFVLVDET
Ga0068869_1003896811	3300005334	Miscanthus Rhizosphere	PATAREEPYSPVFTGSAIEVAGYLGTRMEQRTHTLALVAAELKHLSRAGWATDHLTFVLVDETSVTVRP*
Ga0068869_1015313301	3300005334	Miscanthus Rhizosphere	MDVYLRPDLHSKAPATAREEPYTPVFTGSPVEVAAYLGPRMEQRTHTLALVAAELNHLSRAGWATDHLTFVLVDETSV
Ga0070666_103005073	3300005335	Switchgrass Rhizosphere	SRVRDLPKDDHMDVYLRPDLHSKAPATAREEPYTPVFTGSPVEVAAYLGPRMEQRTHTLALVAAELKHLSRAGWATDHLTFVLVDETSVTVRP*
Ga0070682_1010879351	3300005337	Corn Rhizosphere	TSREEPGDPVFSGSPTEVAAFLGPKMEQRTHTLTLVAAELKHLARAGWATDHLTFVLQDDTSVTVRP*
Ga0068868_1020269512	3300005338	Miscanthus Rhizosphere	MDVYLRPDLHSKAPATAREEPYSPVFTGSAIEVAAYLGTRMEQRTHTIALVAAELKHLSRAGWATDHLTFVLVDETSVTVRP*
Ga0070660_1015332941	3300005339	Corn Rhizosphere	RAGDLPKDVHMDVYLRPDVHSKAPATAREEPYSPVFTGSAIEVAGYLGTRMEQRTHTLALVAAELKHLSRAGWATDHLTFVLVDETSVTVRP*
Ga0070661_1004611482	3300005344	Corn Rhizosphere	MDVYLRPDLHSKAPATAREEPYSPVFTGSAIEVAGYLGTRMEQRTHTLALVAAELKHLSRAGWATDHLTFVLVDETSVTVRP*
Ga0070668_1009671651	3300005347	Switchgrass Rhizosphere	MSLMEVFPRPDLYSQAPPTARQEPTGPVFTGTPDQVAEFLGTRMEQRTHTIALVLGELTHLARAGWATDSLTFVLSDETSVTVRP*
Ga0070673_1013523581	3300005364	Switchgrass Rhizosphere	MDVYLRPDLHSKAPATAREEPYTPVFTGSPVEVAAYLGPRMEQRTHTLALVAAELKHLSRAGWATDHLTFVLVDETSVTVRP*
Ga0070703_105723561	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	GPGWVSATLTRTSIAIDSSRAGDLPKDVHMDVYLRPDVHSKAPATAREEPYSPVFTGSAIEVAGYLGTRMEQRTHTLALVAAELKHLSRAGWATDHLTFVLVDETSVTVRP*
Ga0070714_1021467242	3300005435	Agricultural Soil	MDVYLRPDVHSKAPATAREEPYHPVFTGSAIEVAAYLGTRMEQRTHTLALVAAELKHLSRDGWATDHLTFVLVDETSVTVRP*
Ga0070701_113706132	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MDVYLRPDLHSKAPATAREEPYSPVFTGSAIEVAAYLGTRMEQRTHTIALVAAELKHLSRAGWATDHLTFVLVDETSV
Ga0070694_1004497701	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	DVYLRPDVHSKAPATAREEPYSPVFTGSAIEVAGYLGTRMEQRTHTLALVAAELKHLSRAGWATDHLTFVLVDETSVTVRP*
Ga0070678_1007259283	3300005456	Miscanthus Rhizosphere	RDLPKDDHMDVYLRPDLHSKAPATAREEPYTPVFTGSPVEVAAYLGPRMEQRTHTLALVAAELNHLSRAGWATDHLTFVLVDETSVTVRP*
Ga0070681_106758392	3300005458	Corn Rhizosphere	VRDLPKDDHMDVYLRPDLHSKAPATAREEPYTPVFTGSPVEVAAYLGPRMEQRTHTLALVAAELKHLSRAGWATDHLTFVLVDETSVTVRP*
Ga0070685_101937841	3300005466	Switchgrass Rhizosphere	LRAPIAIDSSRAGDLPKDVHMDVYLRPDVHSKAPATAREEPYSPVFTGSAIEVAGYLGTRMEQRTHTLALVAAELKHLSRAGWATDHLTFVLVDETSVTVRP*
Ga0070672_1000868051	3300005543	Miscanthus Rhizosphere	AVDSSRVRDLPKDDHMDVYLRPDLHSKAPATAREEPYTPVFTGSPVEVAAYLGPRMEQRTHTLALVAAELNHLSRAGWATDHLTFVLVDETSVTVRP*
Ga0070665_1016823673	3300005548	Switchgrass Rhizosphere	YLRPDLHSKAPATAREEPYTPVFTGSPVEVAAYLGPRMEQRTHTLALVAAELNHLSRAGWATDHLTFVLVDETSVTVRP*
Ga0068852_1015598232	3300005616	Corn Rhizosphere	MDVFLRPDPFSKAPDTARLEPKPPVFSGSPIQVAEYLGPRMEQRTHTLALVMAELKHLDRSGWPTDSLTFVLTDE
Ga0068864_1002185523	3300005618	Switchgrass Rhizosphere	VPKVRVMNVFLRPDLHSKAPATSREEPGDPVFSGSPTEVAAFLGPKMEQRTHTLTLVAAELKHLARAGWATDHLTFVLQDDTSVTVRP*
Ga0068866_105078501	3300005718	Miscanthus Rhizosphere	MDVFLRPDPFSKAPDTARLEPKPPVFSGSPIQVAEYLGPRMEQRTHTLALVTAELKHLARSGWPTDSLTFVLNDETSVTVRP*
Ga0068861_1002158931	3300005719	Switchgrass Rhizosphere	MDVYLRPDVHSKAPATAREEPYSPVFTGSAIEVAGYLGTRMEQRTHTLALVAAELKHLSRAGWATDHLTFVLVDETSVT
Ga0068870_113558352	3300005840	Miscanthus Rhizosphere	LRPDLHSKAPATSREEPGDPVFSGSPTEVAAFLGPKMEQRTHTLTLVAAELKHLARAGWATDHLTFVLQDDTSVTVRP*
Ga0068858_1011821571	3300005842	Switchgrass Rhizosphere	DLPKDVHMDVYLRPDVHSKAPATAREEPYSPVFTGSAIEVAGYLGTRMEQRTHTLALVAAELKHLSRAGWATDHLTFVLVDETSVTVRP*
Ga0068860_1007193261	3300005843	Switchgrass Rhizosphere	DHMDVYLRPDLHSKAPATAREEPYTPVFTGSPVEVAAYLGPRMEQRTHTLALVAAELNHLSRAGWATDHLTFVLVDETSVTVRP*
Ga0068860_1025748061	3300005843	Switchgrass Rhizosphere	ADTYSMDVYSRPDLYSQAPPTARQEPGPPVFSGTPAQVAEFIGRRMTTRTHTLALVEGELSHLARAGWPTDSLTFVLADDTSVTVRP*
Ga0082029_16144302	3300006169	Termite Nest	MDVFLRPDLYSQAPATAREEPHAPVFSGSPRQVADYLGPRMQQRTHTLALVTAELAHLARAGWPTDSLTFVLADETSVTVRP*
Ga0111539_135502071	3300009094	Populus Rhizosphere	MDVYLRPDLHSKAPATAREEPYNPVFTGSAIEVAAYLGTRMEQRTHTLALVAAELKHLSRAGWATDHLTFVL
Ga0105245_100682023	3300009098	Miscanthus Rhizosphere	VGVCHTDPTSIAIDSSRAGDLPKDVHMDVYLRPDVHSKAPATAREEPYSPVFTGSAIEVAGYLGTRMEQRTHTLALVAAELKHLSRAGWATDHLTFVLVDETSVTVRP*
Ga0105243_108553152	3300009148	Miscanthus Rhizosphere	VSATLTRTSIAIDSSRAGDLPKDVHMDVYLRPDVHSKAPATAREEPYSPVFTGSAIEVAGYLGTRMEQRTHTLALVAAELKHLSRAGWATDHLTFVLVDETSVTVRP*
Ga0105243_111975971	3300009148	Miscanthus Rhizosphere	MDVYLRPDLHSKAPATAREEPYSPVFTGSAIEVAAYLGTRMEQRTHTIALVAAELKHLSRAGWATDHLTFVL
Ga0105248_105272161	3300009177	Switchgrass Rhizosphere	VSATLTRTSIAIDSSRAGDLPKDVHMDVYLRPDLHSKAPATAREEPYSPVFTGSAIEVAGYLGTRMEQRTHTLALVAAELKHLSRAGWATDHLTFVLVDETSVTVRP
Ga0105237_114738802	3300009545	Corn Rhizosphere	MDVYLRPDVHSKAPATAREEPYSPVFTGSAIEVAAYLGTRMEQRTHTIALVAAELKHLSRAGWATDHLTFVLVDETSVTVRP*
Ga0105249_113714513	3300009553	Switchgrass Rhizosphere	RDADMSLMEVFPRPDLYSQAPPTARQEPTGPVFTGTPDQVAEFLGTRMEQRTHTIALVLGELTHLARAGWATDSLTFVLSDETSVTVRP*
Ga0126307_106385102	3300009789	Serpentine Soil	MRVYARPDLHSQAPPTAGQERDEPIFTGTPEEVAGYLGPRMAQRTHTLALVSGELKHLARSAWPTDSLTFVLKDETTVTVWP*
Ga0126315_102828303	3300010038	Serpentine Soil	MRVYARPDLHSQAPPTAGQERDEPIFTGTPEEVAGYLGPRMAQRTHTLALVSGELKHLARSAWPTDSLTFVLADETSVTVWP*
Ga0126309_100070323	3300010039	Serpentine Soil	MEVFSRPDLHSQAPPTAGQEREAPIFTGSPAEVAEFLGPRMEQRTHTFALVAAELKHLARSAWPTDSLTFVLSDETSVTIRP*
Ga0126312_102550992	3300010041	Serpentine Soil	MDVFARPDMYSHAPATSREEPAAPVFSGTPAEVAEFLGPRMAKRTHTLALVRAELMHLARAGWPTDSLTFVLADDTSVTVRP*
Ga0126312_107046482	3300010041	Serpentine Soil	MKVFIRPDMYSLAPPTARQEPQGPVFSGTPAQVAEFLGPRMEQRTHTLALVRAELTHLSRAGWPTDSLTFVLADETTVTVRP*
Ga0126312_112952502	3300010041	Serpentine Soil	RADRPCAAALKLAARDADIETMRVYLRPDLHSQAPPTAGQERDEPIFTGSPEEVARYLGPRMAQRTHTLALVSGELKHLARSAWPTDSLTFVLTDETTVTVWP*
Ga0126376_127709521	3300010359	Tropical Forest Soil	MSEMEVFARPDLFSKAPDTARQEPKPPVFCGSPTQVAAYLGPRMEQRTHTLALVTAELRHLERAGWATDSLTFVLTDETSVTVRP*
Ga0134124_131707581	3300010397	Terrestrial Soil	MDVFLRPDLHSKAPATSREEPKDPVFTGSPTEVAAFLGPRMEQRTHTLTLVAAELKHLARAGWATDHLTFVLQDDTSVTVRP*
Ga0134122_133971742	3300010400	Terrestrial Soil	MSRMEVFPRPDLYSQAPPTARQEPTDPVFTGTPDQVAEFLGPRMEQRTHTIALVLAELTHLARAGWATDSLTFVLSDETSVTV
Ga0150985_1050220852	3300012212	Avena Fatua Rhizosphere	MSLMEVFPRPDLYSQAPPTARQEPTGPVFCGTPNQVAEFLGPRMERRTHTIALVTAELTHLARAGWPTDSLTFVLSDETSVTVRP*
Ga0150985_1056585361	3300012212	Avena Fatua Rhizosphere	QAPPTARQEPDPPVFTGTPAQVADFVGSRMSRRTHTLALVAGELDHLSRAGWATDSLTFVLADDSSVTVRP*
Ga0150985_1075055293	3300012212	Avena Fatua Rhizosphere	MNVFTRPDLYSQAPSTARQEPHPPVFTGTPAQVADFVGSRMSRRTHTLALVAGELDHLSRAGWATDSLTFVLADDSSVTVRP*
Ga0150985_1090750421	3300012212	Avena Fatua Rhizosphere	YTRPDLYSQAPRTARQEPQPPVFTGTPSQVADFVGSQMSTRTHTLALMAGELSHLARAGWPTDSLTFVLADDTSVTVRP*
Ga0150985_1118786332	3300012212	Avena Fatua Rhizosphere	MEVFIRPDIYSQAPATARQEPGAAVFSGTPAQVAEYLGPRMEQRTHTLALVRAELTHLARDGWPSDSLTFVLADDTSVTVRP*
Ga0150985_1134956552	3300012212	Avena Fatua Rhizosphere	MSVMEVFPRPDLYSQAPPTARQEPTGPVFTGTPDQVAEFLGPRMEKRTHTIALVTAELTHLARAGWPTDSLTFVLADETSVTVRP*
Ga0150985_1135003162	3300012212	Avena Fatua Rhizosphere	MDVFTRPDLYSQAPPTARQEPTGPVFTGSPTQVAAFLGPRMAKRTHTIALVTAELAHLARAGWPTDSLAFVLADDSSVTVRP*
Ga0150985_1194300161	3300012212	Avena Fatua Rhizosphere	MDVFARPDLYSQAPPTARQEPDAPVFTGSSGQVADFLGGRMEQRTHTLALVSAELAHLERAGWATDSLTFVLTDETSVTVRP*
Ga0150984_1032277042	3300012469	Avena Fatua Rhizosphere	MSVMEVFPRPDLYSQAPPTARQEPTGPVFTGTPDQVAEFLGPRMEKRTHTIALVAAELTHLARAGWPTDSLTFVLADETSVTVRP*
Ga0150984_1039799302	3300012469	Avena Fatua Rhizosphere	MDVFARPDLYSQAPPTARQEPDAPVFSGTPNQVAEYLGPRMPQRTHTLALVSAELSHLERAGWPTDSLTFVLTDETS
Ga0150984_1060105831	3300012469	Avena Fatua Rhizosphere	MDVFTRPDLYSQAPPTARQEPIGPVFTGSAAQVAEFLGPRMAQRTHTIALVTAELAHLARAGWPTDSLTFVLADDSSVTVRP*
Ga0150984_1067249103	3300012469	Avena Fatua Rhizosphere	MNVFTRPDLYSQAPKSARQERDAPGFTGTADQVAAFLGPRMEQRTHMLALVTAELANLARAGWETDSLTFVLRDETSVTVRP*
Ga0150984_1109083182	3300012469	Avena Fatua Rhizosphere	MEVFPRPDLYSQAPPTARQEPTGPVFCGTPNQVAEFLGPRMERRTHTIALVTAELTHLARAGWPTDSLTFVLSDETSVTVRP*
Ga0150984_1122129262	3300012469	Avena Fatua Rhizosphere	MDVFTRPDLYSQAPPTARQEPTGPVFTGSSAQVAAFLGERMEQRTHTLALVTAELSHLERAGWASDSLTFVLTDETSVTVRP*
Ga0150984_1124883422	3300012469	Avena Fatua Rhizosphere	MNVFSRPDLYSQAPPSARQEPDGPVFSGTPSQVAAFLGPRMERRTHTIALVTAELSHLERAGWETDSLTFVLTDETSVTVRP*
Ga0150984_1155030402	3300012469	Avena Fatua Rhizosphere	MNVFSRPDLYSQAPPSARQEPDAPVFSGTPSQVAAFLGPRMERRTHTLALVTAELSHLERAGWETDSLTFVLTDETSVTVRP*
Ga0150984_1218168442	3300012469	Avena Fatua Rhizosphere	MDVFTRPDLYSQAPPTARQEPDPPVFTGTPAQVADFVGSRMSRRTHTLALVAGELDHLSRAGWATDSLTFVLADDSSVTVRP*
Ga0150984_1218243411	3300012469	Avena Fatua Rhizosphere	MNVFLRPDLHSRAPATSREEPKEPVFTGSPTEVAAFLGPRMEQRTHTLTLVAAELKHLARAGWATDHLTFVLQDDTSVTVRP*
Ga0164300_104931151	3300012951	Soil	GASQPRPASAGRRRSGPVSDTLDAEQPSPIDSSRAGDLPKDVHMDVYLRPDVHSKAPATAREEPYSPVFTGSAIEVAGYLGTRMEQRTHTIALVAAELKHLSRAGWQTDHLTFVLTDETSVTVRP*
Ga0164298_101241022	3300012955	Soil	MDVYLRPDVHSKAPATAREEPYSPVFTGSAIEVAGYLGTRMEQRTHTPALVAAELKHLSRAGWATDHLTFVLVDDTSVTVRP*
Ga0164299_104078892	3300012958	Soil	VSDTLDAEQPSPIDSSRAGDLPKDVHMDVYLRPDVHSKAPATAREEPYSPVFTGSAIEVAGYLGTRMEQRTHTLALVTAELAHLARAGWETDSLTFVLTDESSVTVRP*
Ga0164301_107783382	3300012960	Soil	SPIDSSRAGDLPKDVHMDVYLRPDVHSKAPATAREEPYSPVFTGSAIEVAGYLGTRMEQRTHTIALVAAELKHLSRAGWQTDHLTFVLTDETSVTVRP*
Ga0164302_101307552	3300012961	Soil	MDVYLRPDVHSKAPATAREEPYSPVFTGSAIEVAGYLGTRMEQRTHTIALVAAELKHLSRAGWQTDHLTFVLTDETSVTVRP*
Ga0164306_106155872	3300012988	Soil	VSDTLDAEQPSPIDSSRAGDLPKDVHMDVYLRPDVHSKAPATAREEPYSPVFTGSAIEVAGYLGTRMEQRTHTIALVAAELKHLSRAGWQTDHLTFVLTDETSVTVRP*
Ga0164305_100175295	3300012989	Soil	MDVYLRPDLHSKAPATAREEPYHPVFTGSAIEVAGYLGTRMEQRTHTIALVAAELKHLSRAGWQTDHLTFVLTDETSVTVRP*
Ga0157378_108900713	3300013297	Miscanthus Rhizosphere	SSPLRDLPKDDHMDVYLRPDLHSTAPAPARAEPYTPVFTGSPVEVAAYLGPRMEQRTHTLALVAAELNHLSRAGWATDHLTFVLVDETSVTVRP*
Ga0163162_122238172	3300013306	Switchgrass Rhizosphere	MSLMEVFPRPDLYSQAPPTARQEPTSPVFTGTPDQVAEFLGTRMEQRPHTIALVLGELTHLARAGWATDSLTFVLSDETSVTVRP*
Ga0157372_120557382	3300013307	Corn Rhizosphere	VGVCHTDPTSIAIDSSRAGDLPKDVHMDVYLRPDVHSKAPATAREEPYSPVFTGSAIEVAGYLGTRMEQRTHTLALVAAELKHLSRAGWATDHLTFVLVDETSVTVRP
Ga0157380_130826321	3300014326	Switchgrass Rhizosphere	MDVYLRRDLHSKAPATAREEPYSPVFTGSAIEVAAYLGTRMEQRTHTIALVAAELKHLSRAGWATDHLTFVLVDETSVTVRP*
Ga0182001_104813331	3300014488	Soil	LYSQAPATAREEPHAPVFTGSPGQVAEYLGPRMEQRTHTLALVTAELNHLARAGWATDSLTFVLSDETSVTVRP*
Ga0157377_106113743	3300014745	Miscanthus Rhizosphere	RPDLHSKAPATSREEPYTPVFTGSPVEVAAYLGPRMEQRTHTLALVAAELKHLSRAGWATDHLTFVLVDETSVTVRP*
Ga0132258_109054735	3300015371	Arabidopsis Rhizosphere	MDVYLRPDLHSKAPATAREEPYTPVFTGSAIEVAAYLGPRMEQRTHTLALVAAELKHLSRAGWATDHLTFVLVDETSVTVR
Ga0132258_126971632	3300015371	Arabidopsis Rhizosphere	MEVFPRPDLYSQAPPTARQEPTDPVFSGTPDQVAEFLGPRMEKRTHTIALVTAELTHLARAGWPTDSLTFVLADETSVTVRP*
Ga0132256_1002302052	3300015372	Arabidopsis Rhizosphere	MDVYLRPDLHSKAPATAREEPYHPVFTGSAIEVAAYLGTRMEQRTHTLALVAAELKHLSRAGWATDHLTFVLVDETSVTVRP*
Ga0132257_1015093052	3300015373	Arabidopsis Rhizosphere	MDVYLRPDLHSKAPATAREEAYHPVFTGSAIEVAAYLGTRMEQRTHTLALVAAELKHLSRAGWATDHLTFVLVDETSVTVRP*
Ga0163161_113636491	3300017792	Switchgrass Rhizosphere	MDVYLRPDLHSKAPATAREEPYTPVFTGSPVEVAAYLGPRMEQRTHTLALVAAELNHLSRAGWATDHLT
Ga0173481_103159382	3300019356	Soil	MSLMEVFPRPDLYSQAPPTARQEPTGPVFTGTPDQVAEFLGTRMEQRTHTIALVLGELTHLARAGWATDSLTFVLSDETSVTVRP
Ga0206356_105604332	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MDVYLRPDVHSKAPATAREEPYSPVFTGSAIEVAGYLGTRMEQRTHTLALVAAELKHLSRAGWATDHLTFVLVDETSV
Ga0206352_106491672	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	MDVYLRPDLHSKAPATAREEPYTPVFTGSPVEVAAYLGPRMEQRTHTLALVAAELKHLSRAGWATDHLTFVLVDETSVTVRP
Ga0206354_113606632	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	LHSKAPATSREEPGDPVFSGSPTEVAAFLGSKMEQRTHTLTLVAAELKHLARAGWATDHLTFVLQDDTSVTVRP
Ga0247794_100549221	3300024055	Soil	MNVFLRPDLHSKAPATSREEPGDPVFSGSPTEVAAFLGSKMEQRTHTLTLVAAELKHLARAGWATDHLTFVLQDDTSVTVRP
Ga0196962_100770351	3300024430	Soil	MDVYVRPDIHSQAPPTADQERDAPIFSGTPAEVAEFLGMRMEKRTHTLALVSAELKHLARTAWPTDSLTFVLADSTSVTVWP
Ga0207656_101166982	3300025321	Corn Rhizosphere	MDVYLRPDVHSKAPATAREEPYSPVFTGSAIEVAGYLGTRMEQRTHTLALVAAELKHLSRAGWATDHLTFVLVDETSVTVRP
Ga0207642_102699093	3300025899	Miscanthus Rhizosphere	MDVFLRPDPFSKAPDTARLEPKPPVFSGSPIQVAEYLGPRMEQRTHTLALVTAELKHLARSGWPTDSLTFVLNDETSVTVRP
Ga0207710_101542242	3300025900	Switchgrass Rhizosphere	MDVYLRPDLHSKAPATAREEPYTPVFTGSPVEVAAYLGPRMEQRTHTIALVAAELKHLSRAGWATDHLTFVLVDETSVTVRP
Ga0207688_106579091	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MDVYLRPDLHSKAPATAREEPYSPVFTGSAIEVAAYLGTRMEQRTHTIALVAAELKHLSRAGWATDHLTFVLVDE
Ga0207654_106419931	3300025911	Corn Rhizosphere	VRDLPKDDHMDVYLRPDLHSKAPATAREEPYTPVFTGSPVEVAAYLGPRMEQRTHTLALVAAELKHLSRAGWATDHLTFVLVDETSVTVRP
Ga0207671_102451783	3300025914	Corn Rhizosphere	MDVYLRPDVHSKAPATAREEPYTPVFTGSPVEVAAYLGPRMEQRTHTLALVAAELKHLSRAGWATDHLTFVLVDETSVTVRP
Ga0207662_100678481	3300025918	Switchgrass Rhizosphere	AVLVGPGWVSATLTRTSIAIDSSRAGDLPKDVHMDVYLRPDVHSKAPATAREEPYSPVFTGSAIEVAGYLGTRMEQRTHTLALVAAELKHLSRAGWATDHLTFVLVDETSVTVRP
Ga0207649_107246891	3300025920	Corn Rhizosphere	RRAASSCGGFVPKVGVMNVFLRPDLHSKAPATSREEPGDPVFSGSPTEVAAFLGPKMEQRTHTLTLVAAELKHLARAGWATDHLTFVLQDDTSVTVRP
Ga0207649_111966752	3300025920	Corn Rhizosphere	MDVYLRPDLHSKAPATAREEPYSPVFTGSAIEVAGYLGTRMEQRTHTLALVAAELNHLSRAGWATDHLTFVLVDETSVTVRP
Ga0207650_113521861	3300025925	Switchgrass Rhizosphere	VPKVRVMNVFLRPDLHSKAPATSREEPGDPVFSGSPTEVAAFLGPKMEQRTHTLTLVAAELKHLARAGWATD
Ga0207644_112787502	3300025931	Switchgrass Rhizosphere	VPKVRVMNVFLRPDLHSKAPATSREEPGDPVFSGSPTEVAAFLGPKMEQRTHTLTLVAAELKHLARAGWATDHLTFVLQDDTSVTVRP
Ga0207686_111413923	3300025934	Miscanthus Rhizosphere	PDVHSKAPATAREEPYSPVFTGSAIEVAGYLGTRMEQRTHTLALVAAELKHLSRAGWATDHLTFVLVDETSVTVRP
Ga0207709_116708512	3300025935	Miscanthus Rhizosphere	FSKAPDTARLEPKPPVFSGSPIQVAEYLGPRMEQRTHTLALVTAELKHLARSGWPTDSLTFVLNDETSVTVRP
Ga0207665_104375452	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MDVYLRPDLHSKAPATAREEPYHPVFTGSAIEVAAYLGTRMEQRTHTLALVAAELKHLSRDGWATDHLTFVLVDETSVTVRP
Ga0207691_101013171	3300025940	Miscanthus Rhizosphere	WVSATLTRTSIAIDSSRAGDLPKDVHMDVYLRPDVHSKAPATAREEPCSPVFTGSAIEVAGYLGTRMEQRTHTLALVAAELKHLSRAGWATDHLTFVLVDETSVTVRP
Ga0207689_109458411	3300025942	Miscanthus Rhizosphere	MDVYLRPDLHSKAPATAREEPYTPVFTGSPVEVAAYLGPRMEQRTHTLALVAAELNHLSRAGWATDHLTFVLVDETSVT
Ga0207661_108060253	3300025944	Corn Rhizosphere	RRPAASSCGGFVPKVRVMNVFLRPDLHSKAPATSREEPGDPVFSGSPTEVAAFLGPKMEQRTHTLTLVAAELKHLARAGWATDHLTFVLQDDTSVTVRP
Ga0207679_103075921	3300025945	Corn Rhizosphere	MDVYLRPDLHSKAPATAREEPYSPVFTGSAIEVAGYLGTRMEQRTHTLALVAAELKHLSRAGWATDHLTFVLVDETSVTVRP
Ga0207679_104406382	3300025945	Corn Rhizosphere	MNVFLRPDLHSKAPATSREEPGDPVFSGSPTEVAAFLGPKMEQRTHTLTLVAAELKHLARAGWATDHLTFVLQDDTSVTVRP
Ga0207640_115389032	3300025981	Corn Rhizosphere	DVHSKAPATAREEPYSPVFTGSAIEVAGYLGTRMEQRTHTLALVAAELKHLSRAGWATDHLTFVLVDETSVTVRP
Ga0207703_104002131	3300026035	Switchgrass Rhizosphere	MDVYLRPDLHSKAPATAREEPYTPVFTGSPVEVAAYLGPRMEQRTHTLALVAAELNHLSRAGWATDHLTFVLVDETSVTV
Ga0207703_109593351	3300026035	Switchgrass Rhizosphere	DLPKDVHMDVYLRPDVHSKAPATAREEPYSPVFTGSAIEVAGYLGTRMEQRTHTLALVAAELKHLSRAGWATDHLTFVLVDETSVTVRP
Ga0207702_105200662	3300026078	Corn Rhizosphere	MNVFLRPDLHSKAPATSREEPRDPVFSGSPTEVAAFLGPKMEQRTHTLTLVAAELKHLARAGWATDHLTFVLQDDTSVTVRP
Ga0207683_100546816	3300026121	Miscanthus Rhizosphere	VRDLPKDDHMDVYLRPDLHSKAPATAREEPYTPVFTGSPVEVAAYLGPRMEQRTHTLALVAAELNHLSRAGWATDHLTFVLVDETSVTVRP
Ga0247818_105942412	3300028589	Soil	MEVFLRPDLFSKAPDTARHEPKPPVFSGSAHQVAEYLGPRMEQRTHTLALVMAELKHLDRSGWPTDSLTFVLTDETSVTVRP
Ga0247822_118133361	3300028592	Soil	MDVYLRPDLHSKAPATAREEPYSPVFTGSAIEVAAYLGTRMEQRTHTIALVAAELKHLSRAGWATDHLTFVLVDETSVTVRP
Ga0247822_119198132	3300028592	Soil	MDVYLRPDLHSKAPATAREEPYTPVFTGSPVEVAAYLGPRMEQRTHTLALVAAELNHLSRAGWATDHLTFVLVDETSVTAIVKA
Ga0247821_109600251	3300028596	Soil	MSLMEVFPRPDLYSQAPPTARQEPTGPVFTGTPDQVAEFLGTRMEQRTHTIALVLGELTHLARAGWATDSLTFVLSDET
Ga0307276_100480713	3300028705	Soil	MDVFTRPDLYSQAPPTARQEPDGPVFSGSPNQVAAFLGPRMEKRTHTLALVTAELLHLERAGWATDSLTFVLADDTSVTVRP
Ga0247826_117870692	3300030336	Soil	MDVYLRPDLHSKAPATAREEPYSPVFTGSAIEVAAYLGTRMEQRTHTIALVAAELKHLSRAGWATDHLTFVLV
Ga0307501_100068083	3300031152	Soil	MSFMEVFPRPDLYSQAPPTARQEPTGPVFTGTPDQVAEFLGPRMEQRTHTIALVLAELTHLARAGWATDSLTFVLSDETSVTVRP
Ga0307408_1005940243	3300031548	Rhizosphere	ARDADTVFMRVFARPDLHSQAPPTAGQERAEPIFTGTPEEVARFLGPRMAQRTHTLALVAGELKHLARSAWSSDSLTFVLSDDTSVTVWP
Ga0307408_1016504792	3300031548	Rhizosphere	MNVFARPDLHSQAPPTTGQEREAPIFTGTPEEVAGFLGPQMAQRTHTLALVAAELKHLARSAWPTDSLTFVLADETSVTV
Ga0310900_102562852	3300031908	Soil	MDVYLRPDLHSKAPATAREEPYTPVFTGSAIEVAAYLGPRMEQRTHTLALVAAELKHLSRAGWATDHLTFVLVDETSVTVRP
Ga0307409_1015573541	3300031995	Rhizosphere	MRVFARPDRHSQAPPTAGQERAEPIFTGTPEEVARFLGPRMAQRTHTLALVAGELKHLARSAWSSDSLTFVLSDDTSVTVWP
Ga0307416_1008060973	3300032002	Rhizosphere	MSRMDVFARPDVFSHAPPTARQERDAPVFRGDPDEVAAYLGSRMEQRTHTLALVKAELSHLQRSGWPTDSLTFVLTDETSVTVRP
Ga0307416_1016918762	3300032002	Rhizosphere	MNVFARPDLHSQAPPTTGQEREAPIFTGTPEEVAGFLGPQMAQRTHTLALVAAELKHLARSAWPTDSLTFVLADETSVTVRP
Ga0310890_117100092	3300032075	Soil	VPNVGVMDVFLRPDLHSKAPATSREEPKDPVFTGSPTEVAAFLGPRMEQRTHTLTLVAAELKHLARAGWATDHLTF
Ga0372943_0054746_158_481	3300034268	Soil	MPPDPHVTIVRTRSSFGPRLSTQHDMLVYSRPDLFSQAPATARQEPDAPIFSGTPAEVAHYLGPLMEKRSHTLALVHAELTHLDRVGWAGDSLTFVLSDDSSVTVRP
Ga0372943_0072805_1016_1264	3300034268	Soil	MEVFTRPDLYSQAPPTARQERDAPVFSGTPAQVAAFLGPRMAQRTHTLALVAAELSHLARAGWATDSLTFVLSDDTSVTVRP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F047297

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences