Metagenome / Metatranscriptome Family F047326

Basic Information
Family ID	F047326
Family Type	Metagenome / Metatranscriptome
Number of Sequences	150
Average Sequence Length	45 residues
Representative Sequence	GLDRSVVEAGLIDQLDLCVADFIVGARPVFGCSGRGSVGTANG
Number of Associated Samples	140
Number of Associated Scaffolds	150

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	93.33 %
% of genes from short scaffolds (< 2000 bps)	93.33 %
Associated GOLD sequencing projects	134
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Most Common Taxonomy
Group	Unclassified (69.333 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.667 % of family members)
Environment Ontology (ENVO)	Unclassified (30.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.667 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.39% β-sheet: 0.00% Coil/Unstructured: 67.61%
Feature Viewer

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Pfam ID	Name	% Frequency in 150 Family Scaffolds
PF12697	Abhydrolase_6	21.33
PF12146	Hydrolase_4	14.00
PF05198	IF3_N	5.33
PF13622	4HBT_3	2.67
PF12695	Abhydrolase_5	2.00
PF12680	SnoaL_2	1.33
PF13417	GST_N_3	0.67
PF13484	Fer4_16	0.67
PF00296	Bac_luciferase	0.67
PF01872	RibD_C	0.67
PF13646	HEAT_2	0.67
PF00561	Abhydrolase_1	0.67

COG ID	Name	Functional Category	% Frequency in 150 Family Scaffolds
COG0290	Translation initiation factor IF-3	Translation, ribosomal structure and biogenesis [J]	5.33
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.67
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.67
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.67

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.33 %
All Organisms	root	All Organisms	30.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.33 %
cellular organisms	root	All Organisms → cellular organisms	30.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.33 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	30.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	27.33 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	26.67 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.33 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.00 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.33 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	12.00 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.33 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	10.67 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.67 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.33 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	2.00 %
unclassified Afipia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia	0.67 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.67 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.33 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	2.00 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.67 %
Afipia sp. Root123D2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. Root123D2	0.67 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.33 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	2.00 %
Streptomyces sp. KY75	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. KY75	0.67 %
Afipia sp. Root123D2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. Root123D2	0.67 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001081\|JGI12662J13196_1006141	Not Available	962	Open in IMG/M
3300001661\|JGI12053J15887_10018565	All Organisms → cellular organisms → Bacteria	3876	Open in IMG/M
3300001661\|JGI12053J15887_10240300	Not Available	904	Open in IMG/M
3300001686\|C688J18823_10031942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	3605	Open in IMG/M
3300002245\|JGIcombinedJ26739_100221219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1785	Open in IMG/M
3300004092\|Ga0062389_104886482	Not Available	505	Open in IMG/M
3300004153\|Ga0063455_100859014	Not Available	637	Open in IMG/M
3300005328\|Ga0070676_11065092	Not Available	610	Open in IMG/M
3300005353\|Ga0070669_101040661	Not Available	703	Open in IMG/M
3300005454\|Ga0066687_10985504	Not Available	503	Open in IMG/M
3300005544\|Ga0070686_101754726	Not Available	527	Open in IMG/M
3300005545\|Ga0070695_100323304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1147	Open in IMG/M
3300005560\|Ga0066670_10993800	Not Available	512	Open in IMG/M
3300005563\|Ga0068855_100526719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1281	Open in IMG/M
3300005568\|Ga0066703_10790346	Not Available	543	Open in IMG/M
3300005575\|Ga0066702_10468126	Not Available	770	Open in IMG/M
3300005844\|Ga0068862_100697076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	983	Open in IMG/M
3300005983\|Ga0081540_1020479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	3975	Open in IMG/M
3300005983\|Ga0081540_1198936	Not Available	731	Open in IMG/M
3300006163\|Ga0070715_10729816	Not Available	594	Open in IMG/M
3300006163\|Ga0070715_11063683	Not Available	507	Open in IMG/M
3300006176\|Ga0070765_101977039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	546	Open in IMG/M
3300006177\|Ga0075362_10131552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1191	Open in IMG/M
3300006794\|Ga0066658_10487553	Not Available	670	Open in IMG/M
3300006797\|Ga0066659_10180538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1528	Open in IMG/M
3300006903\|Ga0075426_10904485	Not Available	666	Open in IMG/M
3300007258\|Ga0099793_10318073	Not Available	758	Open in IMG/M
3300007265\|Ga0099794_10403977	Not Available	714	Open in IMG/M
3300009100\|Ga0075418_10512247	Not Available	1289	Open in IMG/M
3300009101\|Ga0105247_11453501	Not Available	557	Open in IMG/M
3300009101\|Ga0105247_11845650	Not Available	504	Open in IMG/M
3300009174\|Ga0105241_10870124	Not Available	835	Open in IMG/M
3300009176\|Ga0105242_10272049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1535	Open in IMG/M
3300009500\|Ga0116229_10199909	Not Available	1721	Open in IMG/M
3300010038\|Ga0126315_10952260	Not Available	573	Open in IMG/M
3300010044\|Ga0126310_10821225	Not Available	717	Open in IMG/M
3300010333\|Ga0134080_10464700	Not Available	596	Open in IMG/M
3300010373\|Ga0134128_11438486	Not Available	759	Open in IMG/M
3300010396\|Ga0134126_12787973	Not Available	530	Open in IMG/M
3300010397\|Ga0134124_10752254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	970	Open in IMG/M
3300010403\|Ga0134123_13271703	Not Available	522	Open in IMG/M
3300010865\|Ga0126346_1278764	Not Available	638	Open in IMG/M
3300011119\|Ga0105246_10745828	Not Available	863	Open in IMG/M
3300011119\|Ga0105246_12539433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	505	Open in IMG/M
3300011270\|Ga0137391_10275750	All Organisms → cellular organisms → Bacteria	1454	Open in IMG/M
3300012004\|Ga0120134_1052785	Not Available	708	Open in IMG/M
3300012199\|Ga0137383_10943935	Not Available	630	Open in IMG/M
3300012208\|Ga0137376_10479004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1080	Open in IMG/M
3300012209\|Ga0137379_10925010	Not Available	777	Open in IMG/M
3300012212\|Ga0150985_119091647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1658	Open in IMG/M
3300012212\|Ga0150985_121535076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	909	Open in IMG/M
3300012896\|Ga0157303_10313759	Not Available	506	Open in IMG/M
3300012925\|Ga0137419_10647648	Not Available	853	Open in IMG/M
3300012943\|Ga0164241_10641133	Not Available	769	Open in IMG/M
3300012944\|Ga0137410_11845667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	534	Open in IMG/M
3300012961\|Ga0164302_11434553	Not Available	565	Open in IMG/M
3300013296\|Ga0157374_10998720	Not Available	856	Open in IMG/M
3300013307\|Ga0157372_11524518	Not Available	770	Open in IMG/M
3300014166\|Ga0134079_10539769	Not Available	570	Open in IMG/M
3300014326\|Ga0157380_13154661	Not Available	526	Open in IMG/M
3300014745\|Ga0157377_10455129	Not Available	884	Open in IMG/M
3300015053\|Ga0137405_1048712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. Root123D2	550	Open in IMG/M
3300015194\|Ga0167666_1112190	Not Available	551	Open in IMG/M
3300015242\|Ga0137412_10753019	Not Available	719	Open in IMG/M
3300015245\|Ga0137409_10105251	All Organisms → cellular organisms → Bacteria	2614	Open in IMG/M
3300015374\|Ga0132255_105038072	Not Available	559	Open in IMG/M
3300017792\|Ga0163161_11783958	Not Available	547	Open in IMG/M
3300018027\|Ga0184605_10509441	Not Available	523	Open in IMG/M
3300018042\|Ga0187871_10393792	Not Available	765	Open in IMG/M
3300018075\|Ga0184632_10378372	Not Available	599	Open in IMG/M
3300018076\|Ga0184609_10540554	Not Available	527	Open in IMG/M
3300018422\|Ga0190265_11940321	Not Available	695	Open in IMG/M
3300018429\|Ga0190272_11558145	Not Available	675	Open in IMG/M
3300019361\|Ga0173482_10204910	Not Available	810	Open in IMG/M
3300019362\|Ga0173479_10653788	Not Available	559	Open in IMG/M
3300019377\|Ga0190264_10899734	Not Available	691	Open in IMG/M
3300019887\|Ga0193729_1037833	All Organisms → cellular organisms → Bacteria → Proteobacteria	2007	Open in IMG/M
3300019889\|Ga0193743_1024659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3009	Open in IMG/M
3300020580\|Ga0210403_10449032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1050	Open in IMG/M
3300020582\|Ga0210395_10144105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1776	Open in IMG/M
3300021088\|Ga0210404_10471155	Not Available	707	Open in IMG/M
3300021420\|Ga0210394_11027114	Not Available	713	Open in IMG/M
3300021559\|Ga0210409_10837471	Not Available	793	Open in IMG/M
3300022516\|Ga0224542_1024650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	769	Open in IMG/M
3300022756\|Ga0222622_10419104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	945	Open in IMG/M
3300022756\|Ga0222622_10608076	Not Available	789	Open in IMG/M
3300022903\|Ga0247774_1115089	Not Available	633	Open in IMG/M
3300023258\|Ga0224535_1095375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	646	Open in IMG/M
3300025664\|Ga0208849_1038593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1491	Open in IMG/M
3300025899\|Ga0207642_10300695	Not Available	930	Open in IMG/M
3300025913\|Ga0207695_11098825	Not Available	675	Open in IMG/M
3300025916\|Ga0207663_10669435	Not Available	820	Open in IMG/M
3300025920\|Ga0207649_11577371	Not Available	520	Open in IMG/M
3300025923\|Ga0207681_11112696	Not Available	663	Open in IMG/M
3300025931\|Ga0207644_10810770	Not Available	783	Open in IMG/M
3300025931\|Ga0207644_10860587	Not Available	759	Open in IMG/M
3300025936\|Ga0207670_11333755	Not Available	609	Open in IMG/M
3300025942\|Ga0207689_10641463	Not Available	894	Open in IMG/M
3300025949\|Ga0207667_10413479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1373	Open in IMG/M
3300025961\|Ga0207712_10988487	Not Available	746	Open in IMG/M
3300026121\|Ga0207683_10435962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1207	Open in IMG/M
3300026467\|Ga0257154_1072744	Not Available	544	Open in IMG/M
3300026508\|Ga0257161_1076301	Not Available	689	Open in IMG/M
3300026557\|Ga0179587_10389606	Not Available	907	Open in IMG/M
3300027480\|Ga0208993_1065151	Not Available	661	Open in IMG/M
3300027512\|Ga0209179_1056364	Not Available	849	Open in IMG/M
3300027524\|Ga0208998_1036308	Not Available	793	Open in IMG/M
3300027546\|Ga0208984_1146953	Not Available	505	Open in IMG/M
3300027574\|Ga0208982_1068850	Not Available	709	Open in IMG/M
3300027587\|Ga0209220_1098684	Not Available	767	Open in IMG/M
3300027643\|Ga0209076_1149937	Not Available	652	Open in IMG/M
3300027681\|Ga0208991_1097661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	881	Open in IMG/M
3300027894\|Ga0209068_10441517	Not Available	746	Open in IMG/M
3300028047\|Ga0209526_10048799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2981	Open in IMG/M
3300028380\|Ga0268265_10538490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1106	Open in IMG/M
3300028380\|Ga0268265_11225765	Not Available	748	Open in IMG/M
3300028592\|Ga0247822_11034784	Not Available	679	Open in IMG/M
3300028673\|Ga0257175_1066963	Not Available	676	Open in IMG/M
3300028708\|Ga0307295_10177388	Not Available	599	Open in IMG/M
3300028709\|Ga0307279_10055295	Not Available	658	Open in IMG/M
3300028712\|Ga0307285_10013641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1789	Open in IMG/M
3300028719\|Ga0307301_10254334	Not Available	574	Open in IMG/M
3300028778\|Ga0307288_10288015	Not Available	651	Open in IMG/M
3300028790\|Ga0307283_10152020	Not Available	639	Open in IMG/M
3300028875\|Ga0307289_10395579	Not Available	568	Open in IMG/M
3300028881\|Ga0307277_10107064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1190	Open in IMG/M
3300028885\|Ga0307304_10333030	Not Available	676	Open in IMG/M
3300029200\|Ga0120082_1002551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2288	Open in IMG/M
3300029923\|Ga0311347_10434530	Not Available	799	Open in IMG/M
3300029943\|Ga0311340_10114258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2930	Open in IMG/M
3300029944\|Ga0311352_10593020	Not Available	886	Open in IMG/M
3300029951\|Ga0311371_12178309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	579	Open in IMG/M
3300029954\|Ga0311331_10641412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	995	Open in IMG/M
3300029997\|Ga0302302_1075965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1415	Open in IMG/M
3300030002\|Ga0311350_11610599	Not Available	575	Open in IMG/M
3300030503\|Ga0311370_12180096	Not Available	545	Open in IMG/M
3300030966\|Ga0075383_11296527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. KY75	654	Open in IMG/M
3300031027\|Ga0302308_10416486	Not Available	804	Open in IMG/M
3300031170\|Ga0307498_10129813	Not Available	813	Open in IMG/M
3300031708\|Ga0310686_104648031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2798	Open in IMG/M
3300031708\|Ga0310686_114859117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	957	Open in IMG/M
3300031718\|Ga0307474_10732594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	781	Open in IMG/M
3300031824\|Ga0307413_11298749	Not Available	636	Open in IMG/M
3300031852\|Ga0307410_10132849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1831	Open in IMG/M
3300031911\|Ga0307412_11850114	Not Available	556	Open in IMG/M
3300031995\|Ga0307409_101515112	Not Available	698	Open in IMG/M
3300032074\|Ga0308173_11080973	Not Available	747	Open in IMG/M
3300032126\|Ga0307415_100252279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1434	Open in IMG/M
3300032205\|Ga0307472_101064263	Not Available	763	Open in IMG/M
3300034156\|Ga0370502_0266854	Not Available	548	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.67%
Host-Associated	Host-Associated	27.33%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.67%
Plants	Host-Associated → Plants	27.33%
Aquatic	Environmental → Aquatic	6.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.33%
Peat	Environmental → Terrestrial → Peat	7.33%
Sediment	Environmental → Aquatic → Sediment	4.00%
Freshwater	Environmental → Aquatic → Freshwater	1.33%
Unclassified	Environmental → Aquatic → Unclassified	0.67%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.67%
Roots	Host-Associated → Plants → Roots	0.67%
Peat Moss	Host-Associated → Plants → Peat Moss	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.67%
Loam	Environmental → Terrestrial → Soil → Loam	13.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.33%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.33%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.67%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.67%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.67%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.67%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.33%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.00%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.33%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.33%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.33%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.33%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.67%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.67%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.67%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.67%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.00%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.33%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.67%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.00%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.33%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.33%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.33%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.33%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.33%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.33%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.33%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.33%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.33%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.33%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.33%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.67%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.67%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.67%
Biofilm	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Biofilm	0.67%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.67%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.67%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.67%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.67%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.67%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.67%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.67%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	0.67%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001081	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010865	Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012004	Permafrost microbial communities from Nunavut, Canada - A30_5cm_6M	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015194	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb1c, glacier snout)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019889	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022516	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E3 30-34	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022903	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L001-104B-6	Environmental	Open in IMG/M
3300023258	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 30-34	Environmental	Open in IMG/M
3300025664	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027480	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027524	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027546	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027574	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028709	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300029200	Biofilm microbial communities from University of Hong Kong - Biofilm	Environmental	Open in IMG/M
3300029923	II_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029997	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_3	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030966	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB4 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034156	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_01D_18	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12662J13196_10061411	3300001081	Forest Soil	MPAFEGHLYGGRCFDRAVVRAVLINQLNLCIADFIVGARPVFGGSGRGSVGTANG*
JGI12053J15887_100185651	3300001661	Forest Soil	HRHLDGGDRFDIAVVQACLIDQLDFVVADFIIGARPVFGGSGRGSVGTANG*
JGI12053J15887_102403002	3300001661	Forest Soil	MIDTVLIDQLDFVIADFIVGARPVFAGGGRGSVGTANG*
C688J18823_100319421	3300001686	Soil	HGLDRSMVEAGLIDQLDLCVADFIIGARPVFGCSGRGSVGTANG*
JGIcombinedJ26739_1002212191	3300002245	Forest Soil	AVLIDQLNLCVADFIVGARPVFGGSGRGSVGTANG*
Ga0062389_1048864821	3300004092	Bog Forest Soil	DGGDRFDIAVVQACLVDQLDLVVADFIVGARPVFGSSGRGSIGTANG*
Ga0063455_1008590142	3300004153	Soil	LDKIHARIEGHLDGKGCFDGAVVQAGLIDQLDLGVADFIVGARPVFDGGGRGSVGTANG*
Ga0070676_110650921	3300005328	Miscanthus Rhizosphere	RSMVEAGLIDQLDLCVADFIIGARPVFGCSGRGSVGTANG*
Ga0070669_1010406612	3300005353	Switchgrass Rhizosphere	GLDRSVVEAGLIDQLDLCVADFIVGARPVFGCSGRGSVGTANG*
Ga0066687_109855042	3300005454	Soil	HGLDGALVGAVGVDQLDLCIADIIIDARPVVGDGGRGSIGTANG*
Ga0070686_1017547261	3300005544	Switchgrass Rhizosphere	GLDRSVVEAGLIDQLDLCVADFIVGARPVFGCGGRGSVGTANG*
Ga0070695_1003233042	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	IHARLEGHLDGDHGLDGSVVEAGLIDQLDLRVSDIIIGARPVFGCSGRGSVGTANG*
Ga0066670_109938001	3300005560	Soil	SVVRTILIDQLDLRVADIIIGARPVFGGSGRGSVGTANG*
Ga0068855_1005267193	3300005563	Corn Rhizosphere	DGAVVRAVLIDQLNGGVADFVIGARPVFGGSGRGSVGTANG*
Ga0066703_107903461	3300005568	Soil	KVHAGFEGHLDGQHSFDRAVVEAGLIDQLDLRVADFIIGARPVFGCGGRGSVGTANG*
Ga0066702_104681262	3300005575	Soil	GHLDGGDCLDRAVVRAVLVDQLNLCVADFIIGARPVFGGSGRGSVGTANG*
Ga0068862_1006970761	3300005844	Switchgrass Rhizosphere	SVVEAGLIDQLDLCVADFIVGARPVFGCSGRGSVGTANG*
Ga0081540_10204796	3300005983	Tabebuia Heterophylla Rhizosphere	CSVVGAVLIDQLDLRVADIIIGARPVFGCSGRGSVGTANG*
Ga0081540_11989362	3300005983	Tabebuia Heterophylla Rhizosphere	LDGDHGLDRSVVGAVLIDQLDLRVADIVIGARPVFGCSGRGSVGTANG*
Ga0070715_107298161	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	GLDRSMVGAVLIDQLDLRVADFIIGARPVFGCGGRGSVGTANG*
Ga0070715_110636831	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VRAVLIDQLNLCVADFIIGARPVFGGSGRGSIGTANG*
Ga0070765_1019770391	3300006176	Soil	GRCFDRAVIQAVLVDQLNLCVADFIVGTRPVFGGSGRGSVGTANG*
Ga0075362_101315522	3300006177	Populus Endosphere	AVLIDQLDLRVADFIIGARPVFGCGGRGSVGTANG*
Ga0066658_104875532	3300006794	Soil	DGGDCLDRAVVRAVLVDQLNRGVADFVIGARPVFCGSGRGSVGTANG*
Ga0066659_101805381	3300006797	Soil	HLYRRRRLDGAVIGTALIDQLDLCVADFVIGARPVFGGSGRGSVGTANG*
Ga0075426_109044851	3300006903	Populus Rhizosphere	GHLDGDHGLDGSVVEAGLINQLDLRVSDFIIGARPVFGCSGRGSVGTANG*
Ga0099793_103180732	3300007258	Vadose Zone Soil	AVVQACLIDQLDFVIADFIVGARPVFCGSGRGSVGTANG*
Ga0099794_104039771	3300007265	Vadose Zone Soil	DIAVVQACLIDQLDFVVADFIIGAGPVFGGSGRGSVGTANG*
Ga0075418_105122471	3300009100	Populus Rhizosphere	GNHGLDRSMVEAGLIDQLDLCVADFIIGARPVFGCSGRGSVGTANG*
Ga0105247_114535012	3300009101	Switchgrass Rhizosphere	VVETGLIDQLDLCIPDFIIGARPVFDCGGRGSVGTANG*
Ga0105247_118456502	3300009101	Switchgrass Rhizosphere	LEGHLDGNNGLDRSVVEAGLIDQLDLCVADFIVGARPVFGCGGRGSVGTANG*
Ga0105241_108701242	3300009174	Corn Rhizosphere	VVEAGLIDQLDLCVADFIVGARPVFGCSGRGSVGTANG*
Ga0105242_102720493	3300009176	Miscanthus Rhizosphere	FEGHLDGQHGFDGAVVEARLIDQLDLCVADFIIGARPVFGCGGRGSVGTANG*
Ga0116229_101999093	3300009500	Host-Associated	MVQACLIDQLDFVIADFIVGARPVFGDSGRGSVGTANG*
Ga0126315_109522602	3300010038	Serpentine Soil	NHGLDRSVVEAGLIDQLDLCVADFIVGARPVFGCSGRGSVGTANG*
Ga0126310_108212252	3300010044	Serpentine Soil	LDRSVVEAGLIDQLDLRVADFIIGARPVFGCSGRGSVGTANG*
Ga0134080_104647001	3300010333	Grasslands Soil	RFEGHLDGDHGFDGSVVRTILIDQLDLRVADIIIGARPVFGCSGRGSVGTANG*
Ga0134128_114384861	3300010373	Terrestrial Soil	HLDGDHGLEGAVAYAGLIDKLDLGVADIIIGARPVFGCGGRGPVGTANG*
Ga0134126_127879732	3300010396	Terrestrial Soil	DGHLDGKHRLDRSVVQTGLIDQLDLRVADFIIGARPVFYCGGRGSVGTANG*
Ga0134124_107522541	3300010397	Terrestrial Soil	HLDSNRGLDRPVVEAGLIDQLDLCVSDFIIGARPVFGCSGRGSVGTANG*
Ga0134123_132717032	3300010403	Terrestrial Soil	MVETGLIDQLDFVIADFIVGARPVFAGGGRGSVGTANG*
Ga0126346_12787642	3300010865	Boreal Forest Soil	MIDARLIDQLDFVIADFIVGARPVFAGSGRGSVGTANG*
Ga0105246_107458281	3300011119	Miscanthus Rhizosphere	ARFEGHLDGNHGLDRSMVEAGLIDQLDLCVADFIIGARPVFGCGGRGSVGTANG*
Ga0105246_125394331	3300011119	Miscanthus Rhizosphere	GLDRPVVEAGLIDQLDLCVADFIVGARPVFGCSGRGSVGTANG*
Ga0137391_102757503	3300011270	Vadose Zone Soil	DGGDRFDIAVVQACLINQLDFVVADFIVGARPVFGGSGRGSVGTANG*
Ga0120134_10527851	3300012004	Permafrost	GLDRAVVGAVLIDQLDLGVADIIVGARPVFGGGGRGSVGTANG*
Ga0137383_109439351	3300012199	Vadose Zone Soil	DIAVVQACLIDQLDFVVADFIVGARPVFGGSGRGSVGTANG*
Ga0137376_104790041	3300012208	Vadose Zone Soil	IHARLERHLDGNHGLDRSMVEAGLIDQLDLCVADFIIGARPVFGCSGRGSVGTANG*
Ga0137379_109250101	3300012209	Vadose Zone Soil	GHHGFDGAVVEARLIDQLDLRVADFIIGARPVFGCSGRGSVGTANG*
Ga0150985_1190916473	3300012212	Avena Fatua Rhizosphere	LDRAVVRAALIDQLNRGVSDFIVGARPVFGGSGRGSVGTANG*
Ga0150985_1215350762	3300012212	Avena Fatua Rhizosphere	MVDAGLIDQLDFVIADFIVGARPVFAGGGRGSVGTANG*
Ga0157303_103137592	3300012896	Soil	DGNHGFNRSVVEAGLIDQLDLCVADFIVGARPVFGCSGRGSVGTANG*
Ga0137419_106476482	3300012925	Vadose Zone Soil	GDRFDIAVVQACLIDQLDFVIADFIVGARPVFCGSGRGSVGTANG*
Ga0164241_106411332	3300012943	Soil	EGHLDGDHGLNRSVVGAVLIDQLDLRVADIVIGARPVFGCSGRGSVGTANG*
Ga0137410_118456671	3300012944	Vadose Zone Soil	VLIDQLNLCIADFIVCARPVFGGRGRGSVGTANG*
Ga0164302_114345532	3300012961	Soil	RHRFDGAMVGTILVDQLDLCVADVVIDARPVFGDCGRGSIGTANG*
Ga0157374_109987201	3300013296	Miscanthus Rhizosphere	IHARFEGHLDGNHGLDRSMVEAGLIDQLDLCVADFIIGARPVFGCGGRGSVGTANG*
Ga0157372_115245182	3300013307	Corn Rhizosphere	DGSVVEAGLIDQLDLRVSDIIIGARPVFGCSGRGSVGTANG*
Ga0134079_105397691	3300014166	Grasslands Soil	LEGHLDGDHGFDCSVVEAGLIDQLDLRVADFIIGARPVFGCSGRGSVGTANG*
Ga0157380_131546612	3300014326	Switchgrass Rhizosphere	GLIDQLDLRVADFIVGARPVFGCGGRGSVGTANG*
Ga0157377_104551292	3300014745	Miscanthus Rhizosphere	VHGHLDGGHGLDGTMVGAILVDQLDLCVADVVIDARPVFGDCGRGSIGTANG*
Ga0137405_10487121	3300015053	Vadose Zone Soil	GFHRHLDGGDRFDIAVVQACLINQLDFVVADFIVGARPVFGGSGRGSVGTANG*
Ga0167666_11121901	3300015194	Glacier Forefield Soil	NLDKIHARFKGHLDGQHGFDRAVVETGLIDQLDLRVADFIIGARPVFGCGGRGSVGTANG
Ga0137412_107530191	3300015242	Vadose Zone Soil	ALINQLDLRVADFIVVALPVFGCGGRGSVGTANG*
Ga0137409_101052511	3300015245	Vadose Zone Soil	DEIHARFEGHLDGQHGFHGAVIEARLIDQLDLCVADFIIGARPVFGCSGRGSVGTANG*
Ga0132255_1050380721	3300015374	Arabidopsis Rhizosphere	GLDGALVGTIDVDQLDLCVADFIIDARPVFGDCGRGSVGTANG*
Ga0163161_117839582	3300017792	Switchgrass Rhizosphere	DGNNGLDRSVVEAGLIDQLDLRVADFIVGARPVFGCGGRGSVGTANG
Ga0184605_105094411	3300018027	Groundwater Sediment	IHARFEGHLDGNHGLDRSMVEAGLIDQLDLGVADFIIGARPVFGGSGRGSVGTANG
Ga0187871_103937921	3300018042	Peatland	ACLVDQLDFVIADFIIGARPVFGGSGRGSVGTANG
Ga0184632_103783722	3300018075	Groundwater Sediment	ARFEGHLDGNHGLDRSMVEAGLIDQLDLCVADFIIGARPVFGCGGRGSVGTANG
Ga0184609_105405542	3300018076	Groundwater Sediment	NLDKIHARFEGHLDGQHGFDSAVIEACLIDQLDLRVADIIIGARPVFGCSGRGSVGTANG
Ga0190265_119403212	3300018422	Soil	GLDRSVVEAGLIDQLDLRVADFIIGARPVFGCSGRGSVGTANG
Ga0190272_115581452	3300018429	Soil	DRAMVQAGLINQLDLCVADFIVGARPVFGGSGRGSVGTANG
Ga0173482_102049101	3300019361	Soil	GNNGLDRSMVEAGLIDQLDLCVADFIIGARPVFGCSGRGSVGTANG
Ga0173479_106537882	3300019362	Soil	GTMVGAILVDQLDLCVADVVIDARPVFGDCGRGSIGTANG
Ga0190264_108997342	3300019377	Soil	MVEAGLIDQLDLRVADFIIGARPVFGCSGRGSVGTANG
Ga0193729_10378334	3300019887	Soil	MIDARLIDQLDFVIADFIVGARPVFAGSGRGSVGTANG
Ga0193743_10246595	3300019889	Soil	FEGHLDGGNGFDRTVVEAGLINQLDLRVADFIVGARPVFGGSGRGSVGTANG
Ga0210403_104490321	3300020580	Soil	RAVIQAVLVDQLNLCVADFIVGARPVFGGSGRGSVGTANG
Ga0210395_101441053	3300020582	Soil	AVLIDQLNLCVADFIVGARPVFGGSGRGSVGTANG
Ga0210404_104711551	3300021088	Soil	RAVLIDQLNLCVADFIVGARPVFGGSGRGSVGTANG
Ga0210394_110271141	3300021420	Soil	DRAVVGAVLIDQLDLRVADIIVGARPVFGGGGRGSVGTANG
Ga0210409_108374712	3300021559	Soil	GHGLDRAVVRAVLIDQLNLCVADFIVGARPVFGGSGRGSVGTANG
Ga0224542_10246502	3300022516	Soil	AGLIDQLDGEIADFIIGARPVLCGGGRGSVGTANG
Ga0222622_104191042	3300022756	Groundwater Sediment	HLDGDHGLDRSMVEAGLIDQLDLCVADFIIGARPVFGCSGRGSVGTANG
Ga0222622_106080761	3300022756	Groundwater Sediment	LDEIHARFEGHLDGNHGLDRSMVEAGLIDQLDLGVADFIIGARPVFGCGGRGSVGTANG
Ga0247774_11150892	3300022903	Plant Litter	HARLERHFDGNDGLDRSVVEAGLIDQLDLCVADFIVGARPVFGCSGRGSVGTANG
Ga0224535_10953751	3300023258	Soil	VDAGLIDQLDGEIADFIIGARPVLCGGGRGSVGTANG
Ga0208849_10385932	3300025664	Arctic Peat Soil	LDGGDRFDIAVVEACLIDQLDFVVADFIVGARPVFGGSGRGSVGTANG
Ga0207642_103006952	3300025899	Miscanthus Rhizosphere	IHAGFDSHLDGNHGLDRSVAEAGLIDQLDLCVADFIVGARPVFGCSGRGSVGTANG
Ga0207695_110988252	3300025913	Corn Rhizosphere	AMVGAVLIDQLDLRVADIIVGARPVFGGGGRGSVGTANG
Ga0207663_106694352	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	ARFEGHLDGYHGLDRSMVGAVLIDQLDLRVADFIIGARPVFGCGGRGSVGTANG
Ga0207649_115773712	3300025920	Corn Rhizosphere	GDHGLDRSVVEAVLIDQLDLRVADIVIGARPVFGCSGRGSVGTANG
Ga0207681_111126962	3300025923	Switchgrass Rhizosphere	RLEGHLDGDHGLDGSVVEAGLIDQLDLRVSDIIIGARPVFGCSGRGSVGTANG
Ga0207644_108107702	3300025931	Switchgrass Rhizosphere	LDRSVVEAGLIDQLDLCVSDFIVGARPVFGCSGRGSVGTANG
Ga0207644_108605872	3300025931	Switchgrass Rhizosphere	SMVEAGLIDQLDLCVADFIIGARPVFGCGGRGSVGTANG
Ga0207670_113337551	3300025936	Switchgrass Rhizosphere	GNNGLDRSVVEAGLIDQLDLCVADFIVGARPVFGCGGRGSVGTANG
Ga0207689_106414632	3300025942	Miscanthus Rhizosphere	KGHLDGNHGLDRPMVEAGLIDQLDLCVADFIIGARPVFGCGGRGSVGTANG
Ga0207667_104134791	3300025949	Corn Rhizosphere	DGAVVRAVLIDQLNGGVADFVIGARPVFGGSGRGSVGTANG
Ga0207712_109884871	3300025961	Switchgrass Rhizosphere	DEIHAGFDGHLDGNHGLDRSVVEAGLIDQLDLCVADFIVGARPVFGCSGRGSVGTANG
Ga0207683_104359621	3300026121	Miscanthus Rhizosphere	RNLDEIHARLERHLDSNRGLDRPVVEAGLIDQLDLCVSDFIIGARPVFGCSGRGSVGTAN
Ga0257154_10727441	3300026467	Soil	QAVLVDQLNLCVADFIVGARPVFGGSGRGSVGTANG
Ga0257161_10763012	3300026508	Soil	VVQACLINQLDFVVADFIVGARPVFGGSGRGSVGTANG
Ga0179587_103896062	3300026557	Vadose Zone Soil	GFEGHLYGGHCLDGAVVQTGLIDQLNLCVADFIVGARPVFGGSGRGSIGTANG
Ga0208993_10651512	3300027480	Forest Soil	VVRAVLIDQLNLCVADFIVGARPVFCGSGRGSVGTANG
Ga0209179_10563641	3300027512	Vadose Zone Soil	GDRFDIAVVQACLIDQLDFVIADFIVGARPVFCGSGRGSVGTANG
Ga0208998_10363082	3300027524	Forest Soil	DGGHCLDRAVVQAGLIDQLNLCVADFIIGARPVFGGGGRGSVGTANG
Ga0208984_11469532	3300027546	Forest Soil	QHGFDRAVIEAGLINQLDLRVADFIIGARPVFGRGGRGSVGTANG
Ga0208982_10688501	3300027574	Forest Soil	GHCLDRAVVQPGLIDQLNLCVADFIIGARPVFGGGGRGSVGTANG
Ga0209220_10986842	3300027587	Forest Soil	RLDRAVVKAVLVDQLNLCVADFIVGARPVFGGSGRGSVGTANG
Ga0209076_11499372	3300027643	Vadose Zone Soil	AVVQACLIDQLDFVIADFIVGARPVFCGSGRGSVGTANG
Ga0208991_10976612	3300027681	Forest Soil	MIDTVLIDQLDFVIADFIVGARPVFAGGGRGSVGTANG
Ga0209068_104415172	3300027894	Watersheds	DGAVVGTVLIDQLDLRVADFIIGARPVFGCGGRGSVGTANG
Ga0209526_100487994	3300028047	Forest Soil	DRAVVRAVLIDQLNLCVADFIVGARPVFGGSGRGSVGTANG
Ga0268265_105384901	3300028380	Switchgrass Rhizosphere	PCLKRHLDGNHGFNRSVVEAGLIDQLDLCVADFIVGARPVFGCSGRGSVGTANG
Ga0268265_112257652	3300028380	Switchgrass Rhizosphere	HGLDRSMVEAGLIDQLDLCVADFIIGARPVFGCGGRGSVGTANG
Ga0247822_110347841	3300028592	Soil	MVEAGLIDQLDLRVADFIIGARPVFGCGGRGSVGTANG
Ga0257175_10669632	3300028673	Soil	GDRFYIAVVQACLIDQLDFVIADFIVGARPVFCGSGRGSVGTANG
Ga0307295_101773881	3300028708	Soil	VHARVHGHLDGGHGLDGTMVGAILVDQLDLCVADVVIDARPVFGGLGRGSIGTANG
Ga0307279_100552952	3300028709	Soil	CFDRAVVRAVLIDQLNLGVADFIVGARPVFGCSGRGSVGTANG
Ga0307285_100136413	3300028712	Soil	RFEGHLDGNHGLDRSMVEAGLIDQLDLGVADFIIGARPVFGCGGRGSVGTANG
Ga0307301_102543342	3300028719	Soil	LDEIHAGFDSHLDGNHGLDRSVVEAGLIDQLDLCVADFIVGARPVFGCSGRGSVGTANG
Ga0307288_102880151	3300028778	Soil	RFEGHLDGNHGLDRSMVEAGLIDQLDLCVADFIIGARPVFGCSGRGSVGTANG
Ga0307283_101520202	3300028790	Soil	FHGAVIEARLIDQLDLRVADFIVGARPVFGCSGRGSVGTANG
Ga0307289_103955792	3300028875	Soil	DRSMVEAGLIDQLDLGVADFIIGARPVFGCGGRGSVGTANG
Ga0307277_101070642	3300028881	Soil	HLDGKHGLDRSVVEAGLIDQLDLCVADFIVGARPVFGCSGRGSVGTANG
Ga0307304_103330302	3300028885	Soil	DGNHCLDRSMVEAGLIDQLDLCVADFIIGARPVFGCSGRGSVGTANG
Ga0120082_10025511	3300029200	Biofilm	DGRHGFDGALVGAVDVDQLDLCVADIVIDARPVFGDCGRGSVGTANG
Ga0311347_104345302	3300029923	Fen	ACLIDQLDFVIADFIVGARPVFGGSGRGSVGTANG
Ga0311340_101142581	3300029943	Palsa	VVQACLIDQLDFVVADFIVGARPVFGGSGRGSVGTANG
Ga0311352_105930201	3300029944	Palsa	GHLDGGHCLDRTVVRAVLVDQLNLCVADLIVGARPVFGGSGRGSIGTANG
Ga0311371_121783092	3300029951	Palsa	SAMVEACLVDQLYFVIADFIVGARPVFGGSGRGSVGTANG
Ga0311331_106414122	3300029954	Bog	VQACLVDQLDFVIADFIIGARPVFGGSGRGSVGTANG
Ga0302302_10759653	3300029997	Palsa	QIHAGLGGHLDGGHGLDGAVIQAGLVDQLDLCVADFIVGARPVFGGGGRGSVGTANG
Ga0311350_116105991	3300030002	Fen	SVVEAGLIDQLDLCVSDFIIGARPVFGCSGRGSVGTANG
Ga0311370_121800961	3300030503	Palsa	EGHLDGGHCLDRTVVRAVLVDQLNLCVADLIVGARPVFGGSGRGSIGTANG
Ga0075383_112965272	3300030966	Soil	MVLAVLINQLDFVVADFIVGARPVFGGSGRGSVGTANG
Ga0302308_104164861	3300031027	Palsa	GFHRHLDGGDRLDIAVVQACLIDQLDFVVADFIVGARPVFGGSGRGSVGTANG
Ga0307498_101298131	3300031170	Soil	GHLDGNHGLDRSMVEAGLIDQLDLCVADFIIGARPVFGCSGRGSVGTANG
Ga0310686_1046480311	3300031708	Soil	ACLIDQLDFVIADFIVGARPVFGSSGRGSVGTANG
Ga0310686_1148591171	3300031708	Soil	ACLIDQLDFVIADFIVGARPVFGGGGRGSVGTANG
Ga0307474_107325941	3300031718	Hardwood Forest Soil	DIAVIDAGLIDQLDFVIADFIVGARPVFGGSGRGSVGTANG
Ga0307413_112987492	3300031824	Rhizosphere	DRSVVEAGLIDQLDLCVADFIVGARPVFGCSGRGSVGTANG
Ga0307410_101328493	3300031852	Rhizosphere	SVVEAGLIDQLDLRIADIIIGARPVFGCSGRGSVGTANG
Ga0307412_118501142	3300031911	Rhizosphere	LDGNHGLDRSMIEAGLIDQLDLCVADFIIGARPVFGCSGRGSVGTANG
Ga0307409_1015151122	3300031995	Rhizosphere	GLDRSVVEAGLIDQLDLCVADFIVGARPVFGCSGRGSVGTANG
Ga0308173_110809731	3300032074	Soil	AVLIDQLNGGVADFVIGARPVFGGSGRGSVGTANG
Ga0307415_1002522791	3300032126	Rhizosphere	NLDEIHARLKRHLDGNHGFNRSVVEAGLIDQLDLCVADFIVGARPVFGCSGRGSVGTANG
Ga0307472_1010642632	3300032205	Hardwood Forest Soil	DGHHGLDRSMVGAVLIDQLDLRVADFIIGARPVFGCGGRGSVGTANG
Ga0370502_0266854_3_137	3300034156	Untreated Peat Soil	NRLDLAEVDAGLIDQLDLVVANFIVGARPILSGGGRGSVGTANG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F047326

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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