NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F047343

Metagenome / Metatranscriptome Family F047343

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F047343
Family Type Metagenome / Metatranscriptome
Number of Sequences 150
Average Sequence Length 51 residues
Representative Sequence MQAWSECSGNVEQATCAQPGTDETIPVDMRSQITTLLASMILSLQQEAIS
Number of Associated Samples 136
Number of Associated Scaffolds 150

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 31.33 %
% of genes near scaffold ends (potentially truncated) 34.67 %
% of genes from short scaffolds (< 2000 bps) 72.67 %
Associated GOLD sequencing projects 124
AlphaFold2 3D model prediction Yes
3D model pTM-score0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (83.333 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(10.667 % of family members)
Environment Ontology (ENVO) Unclassified
(22.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(41.333 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 34.62%    β-sheet: 0.00%    Coil/Unstructured: 65.38%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 150 Family Scaffolds
PF00239Resolvase 36.00
PF13565HTH_32 22.67
PF13408Zn_ribbon_recom 14.00
PF13551HTH_29 8.00
PF07508Recombinase 5.33
PF13683rve_3 4.00
PF01695IstB_IS21 1.33
PF13518HTH_28 1.33
PF00873ACR_tran 0.67
PF00665rve 0.67
PF13517FG-GAP_3 0.67

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 150 Family Scaffolds
COG1961Site-specific DNA recombinase SpoIVCA/DNA invertase PinEReplication, recombination and repair [L] 41.33
COG2452Predicted site-specific integrase-resolvaseMobilome: prophages, transposons [X] 36.00
COG1484DNA replication protein DnaCReplication, recombination and repair [L] 1.33
COG2801Transposase InsO and inactivated derivativesMobilome: prophages, transposons [X] 0.67
COG2826Transposase and inactivated derivatives, IS30 familyMobilome: prophages, transposons [X] 0.67
COG3316Transposase (or an inactivated derivative), DDE domainMobilome: prophages, transposons [X] 0.67
COG4584TransposaseMobilome: prophages, transposons [X] 0.67

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms83.33 %
UnclassifiedrootN/A16.67 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2088090015|GPICI_8988420All Organisms → cellular organisms → Bacteria1876Open in IMG/M
2199352025|deepsgr__Contig_27833All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2187Open in IMG/M
2228664021|ICCgaii200_c0835880All Organisms → cellular organisms → Bacteria2033Open in IMG/M
3300000550|F24TB_10796254All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria826Open in IMG/M
3300000574|JGI1357J11328_10170369All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300001305|C688J14111_10059510All Organisms → cellular organisms → Bacteria1156Open in IMG/M
3300001593|JGI12635J15846_10473078Not Available743Open in IMG/M
3300003152|Ga0052254_1041680All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300004463|Ga0063356_100902663All Organisms → cellular organisms → Bacteria1248Open in IMG/M
3300004779|Ga0062380_10493815All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300004782|Ga0062382_10405952Not Available642Open in IMG/M
3300005167|Ga0066672_10112864All Organisms → cellular organisms → Bacteria1672Open in IMG/M
3300005174|Ga0066680_10193823All Organisms → cellular organisms → Bacteria1283Open in IMG/M
3300005177|Ga0066690_10100424All Organisms → cellular organisms → Bacteria1857Open in IMG/M
3300005177|Ga0066690_10847068All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300005329|Ga0070683_100166529All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae2091Open in IMG/M
3300005329|Ga0070683_101645861All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300005332|Ga0066388_100254031All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia nodosa2397Open in IMG/M
3300005332|Ga0066388_100699967All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae1620Open in IMG/M
3300005338|Ga0068868_100874657Not Available815Open in IMG/M
3300005343|Ga0070687_100860432Not Available647Open in IMG/M
3300005365|Ga0070688_100135897All Organisms → cellular organisms → Bacteria1664Open in IMG/M
3300005365|Ga0070688_100763223All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria754Open in IMG/M
3300005458|Ga0070681_10269785All Organisms → cellular organisms → Bacteria1613Open in IMG/M
3300005526|Ga0073909_10274733Not Available757Open in IMG/M
3300005537|Ga0070730_10045637All Organisms → cellular organisms → Bacteria → Proteobacteria3197Open in IMG/M
3300005542|Ga0070732_10259389All Organisms → cellular organisms → Bacteria1041Open in IMG/M
3300005558|Ga0066698_10439015All Organisms → cellular organisms → Bacteria892Open in IMG/M
3300005561|Ga0066699_10262963All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae1221Open in IMG/M
3300005561|Ga0066699_10872560Not Available629Open in IMG/M
3300005563|Ga0068855_101578526All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium672Open in IMG/M
3300005574|Ga0066694_10129816All Organisms → cellular organisms → Bacteria1189Open in IMG/M
3300005591|Ga0070761_10072689Not Available1952Open in IMG/M
3300005591|Ga0070761_10984990All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300005610|Ga0070763_10398214All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales774Open in IMG/M
3300005610|Ga0070763_10439762All Organisms → cellular organisms → Bacteria739Open in IMG/M
3300005764|Ga0066903_106034893All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas → Polaromonas glacialis634Open in IMG/M
3300005842|Ga0068858_100126648All Organisms → cellular organisms → Bacteria2392Open in IMG/M
3300005921|Ga0070766_10046159All Organisms → cellular organisms → Bacteria2432Open in IMG/M
3300005944|Ga0066788_10001926All Organisms → cellular organisms → Bacteria → Proteobacteria4002Open in IMG/M
3300005993|Ga0080027_10431148Not Available533Open in IMG/M
3300006055|Ga0097691_1069908All Organisms → cellular organisms → Bacteria1124Open in IMG/M
3300006059|Ga0075017_101224708All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium588Open in IMG/M
3300006102|Ga0075015_101033115Not Available504Open in IMG/M
3300006162|Ga0075030_100693242All Organisms → cellular organisms → Bacteria806Open in IMG/M
3300006163|Ga0070715_10068111All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1582Open in IMG/M
3300006173|Ga0070716_101489689All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales553Open in IMG/M
3300006175|Ga0070712_100398238All Organisms → cellular organisms → Bacteria1136Open in IMG/M
3300006176|Ga0070765_100045519All Organisms → cellular organisms → Bacteria3544Open in IMG/M
3300006791|Ga0066653_10169099All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1084Open in IMG/M
3300006794|Ga0066658_10026427All Organisms → cellular organisms → Bacteria2317Open in IMG/M
3300006796|Ga0066665_10418397All Organisms → cellular organisms → Bacteria1107Open in IMG/M
3300006797|Ga0066659_10387755All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1095Open in IMG/M
3300006846|Ga0075430_100124679All Organisms → cellular organisms → Bacteria2147Open in IMG/M
3300006854|Ga0075425_100421919All Organisms → cellular organisms → Bacteria1536Open in IMG/M
3300006876|Ga0079217_11364095Not Available552Open in IMG/M
3300006903|Ga0075426_11064712All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria612Open in IMG/M
3300009093|Ga0105240_10190122All Organisms → cellular organisms → Bacteria2415Open in IMG/M
3300009094|Ga0111539_10035198All Organisms → cellular organisms → Bacteria6064Open in IMG/M
3300009162|Ga0075423_10414573All Organisms → cellular organisms → Bacteria1414Open in IMG/M
3300009166|Ga0105100_10432615All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas toyotomiensis797Open in IMG/M
3300009551|Ga0105238_10400566All Organisms → cellular organisms → Bacteria1365Open in IMG/M
3300009635|Ga0116117_1093515All Organisms → cellular organisms → Bacteria751Open in IMG/M
3300009644|Ga0116121_1022196All Organisms → cellular organisms → Bacteria2028Open in IMG/M
3300010039|Ga0126309_10008913All Organisms → cellular organisms → Bacteria4055Open in IMG/M
3300010339|Ga0074046_10128467All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1625Open in IMG/M
3300010339|Ga0074046_10284605All Organisms → cellular organisms → Bacteria1019Open in IMG/M
3300010343|Ga0074044_10053514All Organisms → cellular organisms → Bacteria2765Open in IMG/M
3300010358|Ga0126370_10687532All Organisms → cellular organisms → Bacteria897Open in IMG/M
3300010359|Ga0126376_10407943All Organisms → cellular organisms → Bacteria1227Open in IMG/M
3300010366|Ga0126379_12198562Not Available653Open in IMG/M
3300010398|Ga0126383_10307156All Organisms → cellular organisms → Bacteria1587Open in IMG/M
3300012199|Ga0137383_11327340All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium512Open in IMG/M
3300012206|Ga0137380_11693457Not Available516Open in IMG/M
3300012350|Ga0137372_10040116All Organisms → cellular organisms → Bacteria4226Open in IMG/M
3300012677|Ga0153928_1027555All Organisms → cellular organisms → Bacteria1230Open in IMG/M
3300013100|Ga0157373_10261347All Organisms → cellular organisms → Bacteria1225Open in IMG/M
3300013105|Ga0157369_10920574Not Available896Open in IMG/M
3300013105|Ga0157369_11723555All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium636Open in IMG/M
3300013297|Ga0157378_11174436All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales806Open in IMG/M
3300014155|Ga0181524_10112772All Organisms → cellular organisms → Bacteria1487Open in IMG/M
3300014969|Ga0157376_12396358All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria567Open in IMG/M
3300015371|Ga0132258_12087113All Organisms → cellular organisms → Bacteria1425Open in IMG/M
3300015373|Ga0132257_103007564All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria614Open in IMG/M
3300017931|Ga0187877_1169551All Organisms → cellular organisms → Bacteria → Proteobacteria869Open in IMG/M
3300017975|Ga0187782_11629108Not Available510Open in IMG/M
3300018006|Ga0187804_10254514All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Bordetella → Bordetella petrii758Open in IMG/M
3300018033|Ga0187867_10020488All Organisms → cellular organisms → Bacteria4267Open in IMG/M
3300018086|Ga0187769_10160957All Organisms → cellular organisms → Bacteria1648Open in IMG/M
3300018466|Ga0190268_11459943All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300019360|Ga0187894_10060212All Organisms → cellular organisms → Bacteria → Proteobacteria2174Open in IMG/M
3300021168|Ga0210406_10822818Not Available705Open in IMG/M
3300021170|Ga0210400_10066067All Organisms → cellular organisms → Bacteria2826Open in IMG/M
3300021344|Ga0193719_10004590All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae5621Open in IMG/M
3300021374|Ga0213881_10333204All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria679Open in IMG/M
3300021384|Ga0213876_10070684All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1844Open in IMG/M
3300021401|Ga0210393_11635203All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium510Open in IMG/M
3300021402|Ga0210385_10038479All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae3139Open in IMG/M
3300021407|Ga0210383_10335719All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia1302Open in IMG/M
3300023091|Ga0224559_1012916All Organisms → cellular organisms → Bacteria3668Open in IMG/M
3300025619|Ga0207926_1132829All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium576Open in IMG/M
3300025906|Ga0207699_10052349All Organisms → cellular organisms → Bacteria2416Open in IMG/M
3300025913|Ga0207695_10149789All Organisms → cellular organisms → Bacteria2273Open in IMG/M
3300025915|Ga0207693_10112388All Organisms → cellular organisms → Bacteria2136Open in IMG/M
3300025930|Ga0207701_11442699All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria559Open in IMG/M
3300025936|Ga0207670_11661028Not Available543Open in IMG/M
3300025944|Ga0207661_10604082All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia1007Open in IMG/M
3300026035|Ga0207703_10104460All Organisms → cellular organisms → Bacteria2407Open in IMG/M
3300026035|Ga0207703_10923139All Organisms → cellular organisms → Bacteria836Open in IMG/M
3300026088|Ga0207641_10047923All Organisms → cellular organisms → Bacteria3605Open in IMG/M
3300026215|Ga0209849_1002342All Organisms → cellular organisms → Bacteria3206Open in IMG/M
3300026325|Ga0209152_10030294All Organisms → cellular organisms → Bacteria1857Open in IMG/M
3300026332|Ga0209803_1046888All Organisms → cellular organisms → Bacteria1934Open in IMG/M
(restricted) 3300027799|Ga0233416_10113113All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria927Open in IMG/M
3300027821|Ga0209811_10156126Not Available848Open in IMG/M
3300027855|Ga0209693_10119885All Organisms → cellular organisms → Bacteria1303Open in IMG/M
3300027867|Ga0209167_10550357Not Available632Open in IMG/M
3300027880|Ga0209481_10320407Not Available788Open in IMG/M
3300027889|Ga0209380_10039354All Organisms → cellular organisms → Bacteria2679Open in IMG/M
3300027911|Ga0209698_10376735All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia1112Open in IMG/M
3300028379|Ga0268266_10044346All Organisms → cellular organisms → Bacteria → Proteobacteria3802Open in IMG/M
3300029636|Ga0222749_10742490All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria537Open in IMG/M
3300029908|Ga0311341_10159518All Organisms → cellular organisms → Bacteria1442Open in IMG/M
3300030007|Ga0311338_10008016All Organisms → cellular organisms → Bacteria → Acidobacteria16003Open in IMG/M
3300030618|Ga0311354_10872922All Organisms → cellular organisms → Bacteria841Open in IMG/M
3300031525|Ga0302326_11344917All Organisms → cellular organisms → Bacteria969Open in IMG/M
3300031708|Ga0310686_107530851Not Available633Open in IMG/M
3300031708|Ga0310686_107714807All Organisms → cellular organisms → Bacteria790Open in IMG/M
3300031720|Ga0307469_10927717Not Available808Open in IMG/M
3300031740|Ga0307468_100758551All Organisms → cellular organisms → Bacteria821Open in IMG/M
3300031996|Ga0308176_10607171All Organisms → cellular organisms → Bacteria1125Open in IMG/M
3300032013|Ga0310906_10004310All Organisms → cellular organisms → Bacteria4784Open in IMG/M
3300032020|Ga0315296_10201899All Organisms → cellular organisms → Bacteria1188Open in IMG/M
3300032163|Ga0315281_10785287All Organisms → cellular organisms → Bacteria → Proteobacteria984Open in IMG/M
3300032173|Ga0315268_10784742All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales953Open in IMG/M
3300032174|Ga0307470_10051480All Organisms → cellular organisms → Bacteria2112Open in IMG/M
3300032174|Ga0307470_10091969Not Available1710Open in IMG/M
3300032180|Ga0307471_100048638All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia3477Open in IMG/M
3300032205|Ga0307472_102283105Not Available547Open in IMG/M
3300032770|Ga0335085_10063839All Organisms → cellular organisms → Bacteria4908Open in IMG/M
3300032770|Ga0335085_11810467All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300032783|Ga0335079_10085433All Organisms → cellular organisms → Bacteria3583Open in IMG/M
3300032783|Ga0335079_11738148Not Available609Open in IMG/M
3300032828|Ga0335080_10042203All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus5021Open in IMG/M
3300032829|Ga0335070_10221926Not Available1869Open in IMG/M
3300032896|Ga0335075_10269951All Organisms → cellular organisms → Bacteria1936Open in IMG/M
3300032897|Ga0335071_10264410All Organisms → cellular organisms → Bacteria1673Open in IMG/M
3300033158|Ga0335077_10127333All Organisms → cellular organisms → Bacteria2951Open in IMG/M
3300033475|Ga0310811_10139444All Organisms → cellular organisms → Bacteria3071Open in IMG/M
3300033513|Ga0316628_100057737All Organisms → cellular organisms → Bacteria → Proteobacteria4083Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil10.67%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil6.67%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil5.33%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.00%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.00%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.33%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil3.33%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.33%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment2.67%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.67%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.67%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.67%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.67%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.67%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.00%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil2.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.00%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa2.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.00%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.33%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland1.33%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment1.33%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil1.33%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.33%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.33%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil1.33%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.33%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.33%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.33%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.67%
SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Sediment0.67%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.67%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.67%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater0.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.67%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.67%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.67%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.67%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil0.67%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.67%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.67%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog0.67%
Microbial Mat On RocksEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks0.67%
Exposed RockEnvironmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock0.67%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.67%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.67%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.67%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots0.67%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.67%
Attine Ant Fungus GardensHost-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens0.67%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2088090015Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
2199352025Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOILEnvironmentalOpen in IMG/M
2228664021Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000550Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemlyEnvironmentalOpen in IMG/M
3300000574Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 mEnvironmentalOpen in IMG/M
3300001305Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300003152Freshwater sediment microbial communities from Loktak Lake, IndiaEnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004779Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3FreshEnvironmentalOpen in IMG/M
3300004782Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2FreshEnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300005944Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048EnvironmentalOpen in IMG/M
3300005993Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046EnvironmentalOpen in IMG/M
3300006055Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009166Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015EnvironmentalOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009635Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10EnvironmentalOpen in IMG/M
3300009644Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010339Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012677Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ012 MetaGHost-AssociatedOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014155Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaGEnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017931Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100EnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018006Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4EnvironmentalOpen in IMG/M
3300018033Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10EnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300019360White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaGEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300021374Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08EnvironmentalOpen in IMG/M
3300021384Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9Host-AssociatedOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300023091Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 30-34EnvironmentalOpen in IMG/M
3300025619Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026215Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048 (SPAdes)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300027799 (restricted)Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0_MGEnvironmentalOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027855Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300029908II_Bog_E1 coassemblyEnvironmentalOpen in IMG/M
3300030007I_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030618II_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032020Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_18EnvironmentalOpen in IMG/M
3300032163Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0EnvironmentalOpen in IMG/M
3300032173Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_topEnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300032829Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3EnvironmentalOpen in IMG/M
3300032896Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4EnvironmentalOpen in IMG/M
3300032897Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
GPICI_014831102088090015SoilMTAWMQAWSDCGTNVEPGNRAQPGIDNPMPADVRSQITTLLAGMILCLQQEAN
deepsgr_000695702199352025SoilMQAWAECNGDVEPATCSQPGTYETIPVDMRSQITTLLASMILSLQQEAIS
ICCgaii200_083588022228664021SoilMQAWSDCGTNVEPGNRAQPGIDNPMPADVRSQITTLLAGMILCLQQEAN
F24TB_1079625423300000550SoilMQAWSECNGNVEQATYPQPGTCETIPVDMRSQITTLLASMILSLQLEAIP*
JGI1357J11328_1017036913300000574GroundwaterGMTAWMQAWSKCAGSAEPATPAQAGVDEKIPVDMRSQITTLLASMILSQQQEVVQ*
C688J14111_1005951023300001305SoilAWSECAGNVEPEMPAQPGGNETIPLDMRSQLTALLAGMILSLQQEATP*
JGI12635J15846_1047307823300001593Forest SoilLAWSECHGHVEQTACSQPGADETIPAELRSQITTLLASMILSLQQEALS*
Ga0052254_104168013300003152SedimentMTAWMRAWSECAGTVEPVTRAPAGANETIPVDMRSQITTLLASMILSLQQEAIP*
Ga0063356_10090266323300004463Arabidopsis Thaliana RhizosphereMQAWSDCGTNVEPGNRAQPGIDNPMPADVRSQITTLLAGMILCLQQEAN*
Ga0062380_1049381513300004779Wetland SedimentFALFLRRGMTAWMHAWSECAGNVEPGPRSQPVIDESIPGDIRSQITTLLAGMILCLQQEATS*
Ga0062382_1040595223300004782Wetland SedimentGMTAWMQAWPECAGKVESDTRSQPGVNETIMGGMRSQLTTLLASMILCLQQEAAV*
Ga0066672_1011286433300005167SoilMQAWSECAGHGEPATRSQSGAKETIPVDMRSQITTLLASMILSLQ
Ga0066680_1019382323300005174SoilMTAWMQAWSECAGHGEPATRSQSGANEIIPVDMRSQIATLLASMILSLQQEAIS*
Ga0066690_1010042423300005177SoilMTAWMQAWSECAGHGEPATRSQSGAKETIPVDMRSQITTLLASMILSLQQEAIS*
Ga0066690_1084706823300005177SoilGMTAWMQAWSECARPVEPVTSSQPRVDETIPADMRSDITTLLAGMILCLQQEAL*
Ga0070683_10016652923300005329Corn RhizosphereMQAWSECAGNVEPGPRSQPVIDESIPGDIRSQITTLLAGMILCLQQEATS*
Ga0070683_10164586113300005329Corn RhizosphereTAWMQAWSECATSVEPDTQAQSGIDNPMPADMRSQITALLAGMILCLQQEAD*
Ga0066388_10025403143300005332Tropical Forest SoilMQAWSECAGKVEPETRSVSGGNETIPVEMRAQLTSLLAGMILSLHQEATA*
Ga0066388_10069996723300005332Tropical Forest SoilMRAWSECARTVEPVTRAQAGTNEAMPLDMRSQITTLLAGMILSLQQEAIP*
Ga0068868_10087465723300005338Miscanthus RhizosphereMQAWAECAGNVEQATCPRPGIDETIPVDMRSQITTLLASMILSLQQEAIS*
Ga0070687_10086043223300005343Switchgrass RhizosphereECNGDVEPATCSQPGTYETIPVGMRSQITTLLASMILSLQQEAVS*
Ga0070688_10013589733300005365Switchgrass RhizosphereMTAWMQAWAECNGDVEPATCSQPGTYETIPVGMRSQITTLLASMILSLQQEAVS*
Ga0070688_10076322313300005365Switchgrass RhizosphereMQAWAECAGNVEQATCPRPGIDETIPVDMRSQITTLLASMILSLQQEA
Ga0070681_1026978523300005458Corn RhizosphereMTAWMQGWLECAGNVEPATRSQPVVHETIPVDMHSQITTLLVGMILSLQQEANP*
Ga0073909_1027473323300005526Surface SoilGMTAWMQAWSECADNAGPDTRSQPGVDEMIPVDMRSQITTLLVGMILLQQEAIP*
Ga0070730_1004563753300005537Surface SoilSQPGIYETIPVDMRSQITTMLASMILSQQEEVAP*
Ga0070732_1025938913300005542Surface SoilPATSSQPGIYETIPVDMRSQITTMLASMILSQQEEVAP*
Ga0066698_1043901523300005558SoilMQAWSECARPVEPVTSSQPRVDETIPADMRSEITTLLAGMILCLQQEAL*
Ga0066699_1026296323300005561SoilMQAWSECARPVEPVTRSHPKVDETIPADMRSEITTLLAGMILCLQQEAL*
Ga0066699_1087256023300005561SoilRGMTAWMQAWSECAGHGEPATRSQSGAKETIPVDMRSQITTLLASMILSLQQEAIS*
Ga0068855_10157852623300005563Corn RhizosphereMTAWMQAWSECASNAEPAMRAQPSLDNTIPAEMQSQITALLAGMILYLQQEANS*
Ga0066694_1012981613300005574SoilMQAWSECARPVEPVTSSQPRVDETIPADMQSEITTLLAGMILCLQQEAL*
Ga0070761_1007268913300005591SoilAWSECHGHVEQTACSQPGADETIPVEMRSQITTLLASMILSLQQEALS*
Ga0070761_1098499023300005591SoilMQAWSECRGHVEQSACSQSGADETIPVELRSQITTLLASMILSVQQ
Ga0070763_1039821413300005610SoilAWSECHGHVEQTACSQSGADETIPVEMRSQITTLLASMILSLQQEAIS*
Ga0070763_1043976223300005610SoilMQAWSECHGHVEQTACSQPGADETIPAELRSQITTLLASMILSLQQEALS*
Ga0066903_10603489323300005764Tropical Forest SoilMRAWSECAATFEPVTRSQAGANEAIPVDMRSRITTLLASIILSLQQEAIP*
Ga0068858_10012664833300005842Switchgrass RhizosphereMQAWAECAGNVEPATRSQPVIHETIPVDMRSQINSLLVSMILSLQQEAIS*
Ga0070766_1004615933300005921SoilMTAWMLAWSECHGHVEQTACSQPGADETIPVEMRSQITTLLASMILSLQQEALS*
Ga0066788_1000192623300005944SoilMAAWMQAWSECAGNVEPATRSQPVIHETIPVDVRSQIATLLAGMILSLQQEAIP*
Ga0080027_1043114823300005993Prmafrost SoilNVEPATRSQPVIHETIPVDVRSQIATLLAGMILSLQQEAIP*
Ga0097691_106990833300006055Arctic Peat SoilMTAWMQAWSECAGNVESGPRSQPVIDESIPGDIRSQITTLLAGMILCLQQEATS*
Ga0075017_10122470823300006059WatershedsMQAWSECNGDVEQATCSQPGTYDTIPVEMRSQITTLLASMILSLEQEAIS*
Ga0075015_10103311523300006102WatershedsVEQATCAQPGTDETIPVDMRSQITTLLASMILSLQQEAIS*
Ga0075030_10069324223300006162WatershedsMQAWSECSGNVEQATCAQPGTDETIPVDMRSQITTLLASMILSLQQEAIS*
Ga0070715_1006811123300006163Corn, Switchgrass And Miscanthus RhizosphereMQAWSECNGDVEQATCSQPGTYETIPVDMRSQITTLLVSMILSLQQEAIS*
Ga0070716_10148968923300006173Corn, Switchgrass And Miscanthus RhizosphereMQAWSECAGNVEPATRSQPVVHETIPVDMHSQITTLLVGMILSLQQEANP*
Ga0070712_10039823823300006175Corn, Switchgrass And Miscanthus RhizosphereMQAWSECNGDVEQATCSQPGTYETIPVGMRSQITTLLASMILSLQQEAIS*
Ga0070765_10004551923300006176SoilMLAWSECHGHVEQTACSQPGADETIPVEMRSQITTLLASMILSLQQEALS*
Ga0066653_1016909933300006791SoilMKAWMQAWSDCAVNIEPGTKTPAGIDNTMPADMRSQITALLAGMILCLQQQEASQ*
Ga0066658_1002642743300006794SoilMTAWMQAWSECAGHGEPATRSQSGAKETIPVDMRSQITTLLASMILSLQQEAIA*
Ga0066665_1041839733300006796SoilSECARPVEPVTSSQPRVDETIPADMRSEITTLLAGMILCLQQEAL*
Ga0066659_1038775523300006797SoilMQAWSECAGHGEPATRSQSGANEIIPVDMRSQIATLLASMILSLQQEAIS*
Ga0075430_10012467923300006846Populus RhizosphereMKAWIQAWSDCAITVEPGTRAHPAINNEMPADMRSQITAVLAGMILCLQQEAS*
Ga0075425_10042191923300006854Populus RhizosphereMTAWMQAWWECAGNVEPATCPQSGVNETIPLDMRSQLTTLLAGMILSLQQEATL*
Ga0079217_1136409513300006876Agricultural SoilMQAWSDCAITVEPGTWAHPAINNEMPADMRSQITAVLAGMILCLQQEAS*
Ga0075426_1106471213300006903Populus RhizosphereMTAWMQAWTECVGNVEPATRPQFGANETIPVDLRSQL
Ga0105240_1019012223300009093Corn RhizosphereMTAWMQAWSECTGNDDLTTRCQPVVHETIPVDMRSQIATLLAGMILSLQQEVIP*
Ga0111539_1003519843300009094Populus RhizosphereMRAWSECAGNIGPETRSQPGVNETISVDMRSQLTTLLTSMILSLQQEATL*
Ga0075423_1041457313300009162Populus RhizosphereQAWSECASHGEPATCSQPGAHEMIPVDMRSQITTLLASMILSLQQEALS*
Ga0105100_1043261523300009166Freshwater SedimentMTAWMQAWSECASNIEPGEPSQPSFDETLPADMRSQITALLAGIILCLQQEATP*
Ga0105238_1040056623300009551Corn RhizosphereMTAWMQAWSECTGYDDLTTRCQPVVHETIPVDMRSQIATLLAGMILSLQQEVIP*
Ga0116117_109351523300009635PeatlandMQAWSGCHGHVEQTACSQPGADETIPVEMRSQITTLLASMILSLQQEAIS*
Ga0116121_102219623300009644PeatlandMTAWMQAWSECASRVEPSTRSQPRVDATIPADTRTQITALLAGMILCLQQEATS*
Ga0126309_1000891343300010039Serpentine SoilMTAWMQAWSECAINIEPGTRARPGIDNPMPADMRSQITALLAGMILCLQQEAI*
Ga0074046_1012846723300010339Bog Forest SoilMTAWMQAWSECASRVEPSTRPQPRVDATIPADTRTQITALLAGMILCLQQEATS*
Ga0074046_1028460533300010339Bog Forest SoilGMTAWMQAWSECASRVEPSTRSQPRVGATIPADTRAQITALLAGMILCLQQEAPS*
Ga0074044_1005351443300010343Bog Forest SoilMTAWMQAWSECASRVEPSTRSQPRVGATIPADTRAQITALLAGMILCLQQEAPS*
Ga0126370_1068753223300010358Tropical Forest SoilMTTWMQAWSECAGKVEPETRSVSGGNETIPVEMRAQLTSLLAGMILSLHQEATA*
Ga0126376_1040794323300010359Tropical Forest SoilMTAWMQAWSECAGKVEPETRSVSGGNETIPVEMRAQLTSLLAGMILSLHQEATA*
Ga0126379_1219856223300010366Tropical Forest SoilMTAWMQAWSECAGTVEPVTRAHAGGANEAIPVDMRSQITTLLASIILSLQQEAIP*
Ga0126383_1030715633300010398Tropical Forest SoilMTAWMQAWSECAGTVEPVTRAQAGGANEAIPVDMRSQITTLLASMILSLQQEAIP*
Ga0137383_1132734023300012199Vadose Zone SoilMEAWSACAGNVEPETRFQPGANETISVDLRSQLTTLLAGMILSLQQEATL*
Ga0137380_1169345713300012206Vadose Zone SoilGNVEPATRSQPVIQETIPVDMRSQITSLLVSMILSLQQEAIS*
Ga0137372_1004011623300012350Vadose Zone SoilMTAWMQAWSECAGNVESGTRSQPVIDESIPGDIRSQITTLLAGMILCLQQEATS*
Ga0153928_102755533300012677Attine Ant Fungus GardensMTAWMQAWSECSGNVEQATCPRPGTDETISVDMRSQITTLLASMILSLQQEAIS*
Ga0157373_1026134733300013100Corn RhizosphereMTAWMQAWSDCGTNVEPGNRAQPGIDNPMPADVRSQITTLLAGMILCLQQEA
Ga0157369_1092057413300013105Corn RhizosphereAWMEVWSDCAVNIEPGTRTDAGIDNTMPADMRSQITSLLAGMILCLQQQEASS*
Ga0157369_1172355523300013105Corn RhizosphereMTAWMQAWSECASNAEPAMRAQPSLDNTMPAEMQSQITALLAGMILYLQQEANS*
Ga0157378_1117443623300013297Miscanthus RhizosphereMTAWMQAWSECAGNVAPVASSRPAVHEMIPTDMRSQITTLLASMILSQQQEVTP*
Ga0181524_1011277223300014155BogMTAWMQAWSECASRVEPGTRSQPRIDATIPADTRTQITALLAGMILCLQQEATS*
Ga0157376_1239635823300014969Miscanthus RhizosphereMTAWMQAWSECADNAGPDTRSQPGVDEMIPVDMRSQITTLLVGMILL
Ga0132258_1208711323300015371Arabidopsis RhizosphereMQAWSECNGDVEPATCSQSGTYDTIPVEMRSQITTLLASMILSLQQEAIS*
Ga0132257_10300756413300015373Arabidopsis RhizosphereMTAWMQAWAECNGDVEPATCSQPGTYETIPVGMRSQITTLLASMILSLQQEAIS*
Ga0187877_116955123300017931PeatlandMTAWMQAWSECASRVEPSTRSQPRVDATIPADTRTQITALLAGMILCLQQEATS
Ga0187782_1162910813300017975Tropical PeatlandAWMQAWSEYAGNVEPPTPPQPGADETISLDMRSQITTLLAGMILSLQQEAIP
Ga0187804_1025451423300018006Freshwater SedimentMTAWMQAWSECAGNIESATSSKPIVRETIPVDMRSQITSLLASMILSLQQEAIS
Ga0187867_1002048823300018033PeatlandMQAWSECASRVEPSTRSQPRVDATIPADTRTQITALLAGMILCLQQEATS
Ga0187769_1016095713300018086Tropical PeatlandIEAWSECTRHVEPIARSEPRVDDPIPADTRTQITALLAGMILCLQQEATS
Ga0190268_1145994323300018466SoilMKAWMQAWSDCAMNIEPGTKTPAGIDNTKPADMRSQITSLLAGMILCLQQEANS
Ga0187894_1006021233300019360Microbial Mat On RocksMTAWMQAWSECAGDVEPATRSQPDVNETISVDMRSQITTLLASMILSLQQEAMT
Ga0210406_1082281823300021168SoilAWMQAWSECNGDVEQATCSQPGTYETIPVDMRSQITTLLVSMILSLQQEAIS
Ga0210400_1006606723300021170SoilMQAWSECRGHVEQTACSQSGADETIPVERRSQITTLLASMILSLQQEAIS
Ga0193719_1000459033300021344SoilMQAWSECARRVEPDTRSQPRVDATVPADTRVQITALLAGMILYLQQEATS
Ga0213881_1033320423300021374Exposed RockMKAWMQAWSDCSFNVEPGTRSDAGISHTMPAGMQSQITSLLAGMILCLQQKEAS
Ga0213876_1007068423300021384Plant RootsMTAWMQAWSECAGSAEPDVQSQPVIQETIPSDIRSQIASLLASMILSQQQEATS
Ga0210393_1163520313300021401SoilMQAWSECHGHVEQTACSQPGADETIPAELRSQITTLLASMILSLQQEALS
Ga0210385_1003847923300021402SoilMTAWMQAWSECRGHVEQTACSQSGADETIPVERRSQITTLLASMILSLQQEAIS
Ga0210383_1033571923300021407SoilMTAWMQAWSECHGHVEQTACSQPGADETIPVEMRSQITTLLASMILSLQQEALS
Ga0224559_101291643300023091SoilAWIQAWSECAGNVEPGPRSQPVIDEPIPGDIRSQITTLLAGMILCLQQEATS
Ga0207926_113282923300025619Arctic Peat SoilMTAWMQAWSECAGNVESGPRSQPVIDESIPGDIRSQITTLLAGMILCLQQEATS
Ga0207699_1005234913300025906Corn, Switchgrass And Miscanthus RhizosphereTVNVEPATISQPGIYETIPVDMRSQITTMLASMILSQQEEVVP
Ga0207695_1014978923300025913Corn RhizosphereMTAWMQAWSECTGNDDLTTRCQPVVHETIPVDMRSQIATLLAGMILSLQQEVIP
Ga0207693_1011238823300025915Corn, Switchgrass And Miscanthus RhizosphereMTAWMQAWSECAGNVEPATRSQPVVHETIPVDMRSQIATLLAGMILSLQQEAIP
Ga0207701_1144269913300025930Corn, Switchgrass And Miscanthus RhizosphereMTAWMQAWAECNGDVEPATCSQPGTYETIPVGMRSQITTLLASMILSL
Ga0207670_1166102823300025936Switchgrass RhizosphereAWAECNGDVEPATCSQPGTYETIPVGMRSQITTLLASMILSLQQEAVS
Ga0207661_1060408223300025944Corn RhizosphereMTAWMQAWSECAGNVEPGPRSQPVIDESIPGDIRSQITTLLAGMILCLQQEATS
Ga0207703_1010446033300026035Switchgrass RhizosphereMTAWMQAWAECAGNVEPATRSQPVIHETIPVDMRSQINSLLVSMILSLQQEAIS
Ga0207703_1092313923300026035Switchgrass RhizosphereNGDVEPATCSQPGTYETIPVGMRSQITTLLASMILSLQQEAVS
Ga0207641_1004792333300026088Switchgrass RhizosphereMQAWAECAGNVEQATCPRPGIDETIPVDMRSQITTLLASMILSLQQEAIS
Ga0209849_100234223300026215SoilMAAWMQAWSECAGNVEPATRSQPVIHETIPVDVRSQIATLLAGMILSLQQEAIP
Ga0209152_1003029433300026325SoilMTAWMQAWSECAGHGEPATRSQSGAKETIPVDMRSQITTLLASMILSLQQEAIS
Ga0209803_104688823300026332SoilMTAWMQAWSECAGHGEPATRSQSGANEIIPVDMRSQIATLLASMILSLQQEAIS
(restricted) Ga0233416_1011311313300027799SedimentMAAWMQAWSECTGKVELGTRSVSGGNETILVDIRSQLTSLLAGMILSLQQEATP
Ga0209811_1015612623300027821Surface SoilLFLRRGMTAWMQAWSECADNAGPDTRSQPGVDEMIPVDMRSQITTLLVGMILLQQEAIP
Ga0209693_1011988513300027855SoilMQAWSECHGHVEQTACSQPGADETIPAELRSQITTLLASMILSLQQEAI
Ga0209167_1055035713300027867Surface SoilRGMTTWMQTWSECTVNVEPATSSQPGIYETIPVDMCSQITTMLASMILSQQEEVAP
Ga0209481_1032040723300027880Populus RhizosphereMKAWIQAWSDCAITVEPGTRAHPAINNEMPADMRSQITAVLAGMILCLQQEAS
Ga0209380_1003935423300027889SoilMLAWSECHGHVEQTACSQPGADETIPVEMRSQITTLLASMILSLQQEALS
Ga0209698_1037673523300027911WatershedsMQAWSECSGNVEQATCAQPGTDETIPVDMRSQITTLLASMILSLQQEAIS
Ga0268266_1004434653300028379Switchgrass RhizosphereMTAWMQAWSECVCNVAPAPCSPPDVHETIPAGMRSQITILLASMILSQQQEVTP
Ga0222749_1074249013300029636SoilMKAWMQAWAECAGNVEQATCPRPGIDETIPVDMRSQITTLLASM
Ga0311341_1015951813300029908BogCAGNVEPATRSQPVVHEPFPVDMRSQIATLLAGMILSLHQEVIP
Ga0311338_1000801613300030007PalsaPRSQPVIDEPIPGDIRSQITTLLAGMILCLQQEATS
Ga0311354_1087292223300030618PalsaMQAWSECHGHVEQTACPQPGADETIPVAMRSQIITLLASMILSLQQEALS
Ga0302326_1134491713300031525PalsaRGMTAWMQAWSECHGHVEQTACSQPGADETIPVEMRSQITTLLASMILSLQQEALS
Ga0310686_10753085123300031708SoilALFLRRGMTAWMQALSECHGDVEQTACSQPRADETIPVEMRSQIATLLASMILSLQQEAI
Ga0310686_10771480723300031708SoilEQTACPQPGADETIPVEMRSQITTLLASMILSLQQEALS
Ga0307469_1092771723300031720Hardwood Forest SoilMQAWSECSGKVEQSTCSQPGTDETIPVDMRSQITSLLASMILSLQQEAIS
Ga0307468_10075855113300031740Hardwood Forest SoilAWSECADNAEPDTRSQPGVDEMIPVDMRSQITTLLVGMILLQQEAIP
Ga0308176_1060717123300031996SoilMTAWMQAWSECASKVEPGTRAQPGTDNPMPADMRSQMTTLLAGMILYLLQEAI
Ga0310906_1000431043300032013SoilMTAWMRAWSECAGNIGPETRSQPGVNETISVDMRSQITTLLTSMILSLQQEAIQ
Ga0315296_1020189913300032020SedimentMTAWMQAWSECASPVEPGIRSQPRVEATLPADLRSEITTLLAGMILCLPQEAIP
Ga0315281_1078528723300032163SedimentMTAWMQAWSECASRVEPGTRSQPRVDATIPADTRTQITALLAGMILCLQQEATS
Ga0315268_1078474223300032173SedimentMTAWMQAWSECSSKVEPSTRSQPGVDETLPADMRSPITALLAGMILCLQQETTA
Ga0307470_1005148033300032174Hardwood Forest SoilMTAWMQAWSECSGKVEQSTCSQPGTDETIPVDMRSQITSLLASMILSLQQEAIS
Ga0307470_1009196923300032174Hardwood Forest SoilSWSECNGDVEQATCSQPGTYETVPVDMRSQITTLLVSMILSLQQEAIT
Ga0307471_10004863823300032180Hardwood Forest SoilMQAWSECNGNVEQTTCSQPSTYETIPVDMRSQITTLLASMILSLQLEAIP
Ga0307472_10228310513300032205Hardwood Forest SoilNGDVEQATCSQPGTYETVPVDMRSQITTLLVSMILSLQQEAIS
Ga0335085_1006383933300032770SoilMQAWSECTGNVEQATCSQPGTYETIPLDMRSQITTLLASMILSLQQEAIS
Ga0335085_1181046713300032770SoilTCPRPGTDETIPVDMRSQITTLLASMILSLQQEAIS
Ga0335079_1008543333300032783SoilMEAWLECSSRVEPGPHSEPQVDATIPTHTRTQITALLAGMILYLQQEATA
Ga0335079_1173814823300032783SoilSECAGNIESATSSKPIVRETIPVDMRSQITSLLASMILSLQQEAIS
Ga0335080_1004220363300032828SoilMQAWSECSGNAEREMRVAPGGNEIIPLGLRSQLTSLLTGMILSLHQEATA
Ga0335070_1022192623300032829SoilEQATCSQPGTYETIPLDMRSQITTLLASMILSLQQEAIS
Ga0335075_1026995133300032896SoilMTAWMQAWLECAGNVEPATRSQPVVHETIPVEMRSQIAILLAGMILSLQQEAIP
Ga0335071_1026441023300032897SoilMTVWMEAWLECSSRVEPGPHSEPQVDATIPTHTRTQITALLAGMILYLQQEATA
Ga0335077_1012733313300033158SoilMQAWSECTGNVEQATCSQPGTYETIPLDMRSQITTL
Ga0310811_1013944423300033475SoilMQAWSECAGNVEPGPRSQPVIDESIPGDIRSQITTLLAGMILCLQQEATS
Ga0316628_10005773753300033513SoilMTAWMQAWSECAGNVAPATSSQSGLQETIPADMRSQITTLLAGMILSQQQEATP

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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