Metagenome / Metatranscriptome Family F047522

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F047522
Family Type	Metagenome / Metatranscriptome
Number of Sequences	149
Average Sequence Length	84 residues
Representative Sequence	MCSIETMRLDVERRMRRGERFTDVEDVINASDLAADEKSALWLLAWSYVHPRAQRREAIAHLDHLTAATSPPATNRRRHLRVAG
Number of Associated Samples	92
Number of Associated Scaffolds	149

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	69.39 %
% of genes near scaffold ends (potentially truncated)	33.56 %
% of genes from short scaffolds (< 2000 bps)	90.60 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (67.114 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil (13.423 % of family members)
Environment Ontology (ENVO)	Unclassified (39.597 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.966 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.21% β-sheet: 0.00% Coil/Unstructured: 51.79%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 149 Family Scaffolds
PF13581	HATPase_c_2	10.74
PF10057	MpsC	6.71
PF01145	Band_7	1.34
PF13466	STAS_2	1.34
PF07883	Cupin_2	1.34
PF01263	Aldose_epim	1.34
PF03401	TctC	0.67
PF00108	Thiolase_N	0.67
PF01636	APH	0.67
PF00486	Trans_reg_C	0.67
PF13090	PP_kinase_C	0.67
PF01262	AlaDh_PNT_C	0.67
PF07731	Cu-oxidase_2	0.67
PF03861	ANTAR	0.67
PF12681	Glyoxalase_2	0.67
PF11139	SfLAP	0.67
PF13683	rve_3	0.67
PF02518	HATPase_c	0.67
PF01548	DEDD_Tnp_IS110	0.67
PF00487	FA_desaturase	0.67
PF14371	DUF4412	0.67

COG ID	Name	Functional Category	% Frequency in 149 Family Scaffolds
COG0676	D-hexose-6-phosphate mutarotase	Carbohydrate transport and metabolism [G]	1.34
COG2017	Galactose mutarotase or related enzyme	Carbohydrate transport and metabolism [G]	1.34
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.67
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.67
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.67
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.67
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.67
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.67
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	0.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.11 %
All Organisms	root	All Organisms	32.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.11 %
cellular organisms	root	All Organisms → cellular organisms	32.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.11 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.11 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	28.19 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.67 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.11 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	28.19 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.67 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.11 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10.07 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	4.70 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.67 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.11 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	8.72 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4.03 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.67 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.67 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.11 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.72 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	2.01 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.67 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.67 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.67 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.11 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.72 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2.01 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.67 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.67 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.67 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.11 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.72 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	1.34 %
unclassified Conexibacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter	0.67 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.67 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.67 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.11 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.72 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1.34 %
Streptomyces sp. Mg1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Mg1	0.67 %
Conexibacter sp. S30A1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. S30A1	0.67 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.67 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918013\|NODE_5641_length_1087_cov_7.710212	Not Available	1119	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2312799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	837	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_14417684	Not Available	842	Open in IMG/M
3300000956\|JGI10216J12902_103448806	Not Available	1015	Open in IMG/M
3300000956\|JGI10216J12902_112840071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	957	Open in IMG/M
3300001686\|C688J18823_10016437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	4931	Open in IMG/M
3300001686\|C688J18823_10098958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2026	Open in IMG/M
3300001686\|C688J18823_10132798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1717	Open in IMG/M
3300001686\|C688J18823_10490326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	789	Open in IMG/M
3300001686\|C688J18823_10611966	Not Available	695	Open in IMG/M
3300002568\|C688J35102_117762817	Not Available	504	Open in IMG/M
3300002568\|C688J35102_118837955	Not Available	603	Open in IMG/M
3300002568\|C688J35102_119571311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	722	Open in IMG/M
3300002568\|C688J35102_119882454	Not Available	802	Open in IMG/M
3300002568\|C688J35102_120204527	Not Available	926	Open in IMG/M
3300002568\|C688J35102_120357987	Not Available	1012	Open in IMG/M
3300002568\|C688J35102_120600552	Not Available	1227	Open in IMG/M
3300002568\|C688J35102_120815856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1671	Open in IMG/M
3300002568\|C688J35102_120901274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2147	Open in IMG/M
3300004081\|Ga0063454_100013708	All Organisms → cellular organisms → Bacteria	2309	Open in IMG/M
3300004081\|Ga0063454_100030172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1888	Open in IMG/M
3300004081\|Ga0063454_101324857	Not Available	605	Open in IMG/M
3300004153\|Ga0063455_100294458	Not Available	885	Open in IMG/M
3300004153\|Ga0063455_100900356	Not Available	627	Open in IMG/M
3300004153\|Ga0063455_101493826	Not Available	527	Open in IMG/M
3300004463\|Ga0063356_100124696	All Organisms → cellular organisms → Bacteria	2869	Open in IMG/M
3300005334\|Ga0068869_101624605	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300005338\|Ga0068868_100297985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1369	Open in IMG/M
3300005338\|Ga0068868_100386681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1205	Open in IMG/M
3300005340\|Ga0070689_100868715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. S30A1	796	Open in IMG/M
3300005440\|Ga0070705_101482018	Not Available	568	Open in IMG/M
3300005441\|Ga0070700_101984413	Not Available	504	Open in IMG/M
3300005614\|Ga0068856_101459061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	698	Open in IMG/M
3300005616\|Ga0068852_100247159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1708	Open in IMG/M
3300005617\|Ga0068859_102026478	Not Available	635	Open in IMG/M
3300005617\|Ga0068859_102814727	Not Available	534	Open in IMG/M
3300005718\|Ga0068866_10091864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1655	Open in IMG/M
3300005719\|Ga0068861_100038416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3565	Open in IMG/M
3300005719\|Ga0068861_102691779	Not Available	502	Open in IMG/M
3300006046\|Ga0066652_100568616	Not Available	1064	Open in IMG/M
3300006881\|Ga0068865_101570110	Not Available	591	Open in IMG/M
3300009094\|Ga0111539_10218386	All Organisms → cellular organisms → Bacteria	2220	Open in IMG/M
3300009148\|Ga0105243_10099338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2412	Open in IMG/M
3300009148\|Ga0105243_10283782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1493	Open in IMG/M
3300009148\|Ga0105243_11403222	Not Available	719	Open in IMG/M
3300009551\|Ga0105238_11534934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	695	Open in IMG/M
3300009553\|Ga0105249_11601599	Not Available	724	Open in IMG/M
3300009789\|Ga0126307_10799591	Not Available	761	Open in IMG/M
3300009789\|Ga0126307_11151106	Not Available	628	Open in IMG/M
3300009789\|Ga0126307_11182203	Not Available	619	Open in IMG/M
3300009789\|Ga0126307_11550700	Not Available	538	Open in IMG/M
3300009840\|Ga0126313_10001232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13322	Open in IMG/M
3300009840\|Ga0126313_10454174	Not Available	1022	Open in IMG/M
3300009840\|Ga0126313_10617956	Not Available	874	Open in IMG/M
3300010038\|Ga0126315_11198480	Not Available	516	Open in IMG/M
3300010039\|Ga0126309_10104637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1462	Open in IMG/M
3300010041\|Ga0126312_10155321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1589	Open in IMG/M
3300010041\|Ga0126312_10301740	Not Available	1130	Open in IMG/M
3300010041\|Ga0126312_10889930	Not Available	648	Open in IMG/M
3300010042\|Ga0126314_11277009	Not Available	550	Open in IMG/M
3300010044\|Ga0126310_10684941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	775	Open in IMG/M
3300010146\|Ga0126320_1296400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	607	Open in IMG/M
3300010166\|Ga0126306_11131209	Not Available	642	Open in IMG/M
3300010166\|Ga0126306_11369747	Not Available	585	Open in IMG/M
3300010375\|Ga0105239_13273243	Not Available	527	Open in IMG/M
3300010396\|Ga0134126_12197531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	602	Open in IMG/M
3300010400\|Ga0134122_11134810	Not Available	777	Open in IMG/M
3300010401\|Ga0134121_12021792	Not Available	609	Open in IMG/M
3300010999\|Ga0138505_100046369	Not Available	621	Open in IMG/M
3300011332\|Ga0126317_10495732	Not Available	661	Open in IMG/M
3300012212\|Ga0150985_102616039	Not Available	582	Open in IMG/M
3300012212\|Ga0150985_109256528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	646	Open in IMG/M
3300012212\|Ga0150985_115413583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	748	Open in IMG/M
3300012212\|Ga0150985_115875826	Not Available	619	Open in IMG/M
3300012212\|Ga0150985_119045706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	651	Open in IMG/M
3300012469\|Ga0150984_109247308	Not Available	546	Open in IMG/M
3300012469\|Ga0150984_114787799	Not Available	502	Open in IMG/M
3300012469\|Ga0150984_116867469	Not Available	590	Open in IMG/M
3300012469\|Ga0150984_119839179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	948	Open in IMG/M
3300012508\|Ga0157315_1077960	Not Available	500	Open in IMG/M
3300012907\|Ga0157283_10150877	Not Available	685	Open in IMG/M
3300012911\|Ga0157301_10231918	Not Available	639	Open in IMG/M
3300012911\|Ga0157301_10437672	Not Available	516	Open in IMG/M
3300012915\|Ga0157302_10087637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	958	Open in IMG/M
3300012915\|Ga0157302_10467729	Not Available	537	Open in IMG/M
3300013297\|Ga0157378_12747901	Not Available	545	Open in IMG/M
3300013307\|Ga0157372_12757160	Not Available	564	Open in IMG/M
3300014497\|Ga0182008_10462473	Not Available	692	Open in IMG/M
3300014745\|Ga0157377_11639002	Not Available	517	Open in IMG/M
3300015077\|Ga0173483_10577582	Not Available	614	Open in IMG/M
3300015371\|Ga0132258_10607840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2745	Open in IMG/M
3300015371\|Ga0132258_11469039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Mg1	1722	Open in IMG/M
3300015372\|Ga0132256_100646044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1173	Open in IMG/M
3300015372\|Ga0132256_101230263	Not Available	862	Open in IMG/M
3300015373\|Ga0132257_100347643	Not Available	1792	Open in IMG/M
3300015374\|Ga0132255_106302473	Not Available	502	Open in IMG/M
3300017965\|Ga0190266_10644165	Not Available	650	Open in IMG/M
3300019356\|Ga0173481_10019704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2037	Open in IMG/M
3300025901\|Ga0207688_10139946	Not Available	1424	Open in IMG/M
3300025927\|Ga0207687_11492217	Not Available	581	Open in IMG/M
3300025932\|Ga0207690_11190163	Not Available	636	Open in IMG/M
3300025934\|Ga0207686_10561362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	894	Open in IMG/M
3300025934\|Ga0207686_11392265	Not Available	577	Open in IMG/M
3300025935\|Ga0207709_10699994	Not Available	811	Open in IMG/M
3300025935\|Ga0207709_10913749	Not Available	714	Open in IMG/M
3300025938\|Ga0207704_10520028	Not Available	962	Open in IMG/M
3300025942\|Ga0207689_10563458	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300025944\|Ga0207661_11518696	Not Available	614	Open in IMG/M
3300025961\|Ga0207712_11026887	Not Available	732	Open in IMG/M
3300026035\|Ga0207703_10234965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1645	Open in IMG/M
3300026035\|Ga0207703_11441497	Not Available	662	Open in IMG/M
3300026067\|Ga0207678_10293021	Not Available	1398	Open in IMG/M
3300026075\|Ga0207708_11908601	Not Available	520	Open in IMG/M
3300026078\|Ga0207702_10598765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1081	Open in IMG/M
3300026089\|Ga0207648_11925733	Not Available	553	Open in IMG/M
3300026118\|Ga0207675_100150109	Not Available	2218	Open in IMG/M
3300026118\|Ga0207675_101177596	Not Available	787	Open in IMG/M
3300026142\|Ga0207698_10299992	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1495	Open in IMG/M
3300026142\|Ga0207698_10447266	Not Available	1246	Open in IMG/M
3300026325\|Ga0209152_10387246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	545	Open in IMG/M
3300026899\|Ga0209326_1005357	Not Available	956	Open in IMG/M
3300027695\|Ga0209966_1173768	Not Available	505	Open in IMG/M
3300028705\|Ga0307276_10194098	Not Available	532	Open in IMG/M
3300031092\|Ga0308204_10028281	Not Available	1221	Open in IMG/M
3300031152\|Ga0307501_10028566	Not Available	1123	Open in IMG/M
3300031152\|Ga0307501_10083853	Not Available	778	Open in IMG/M
3300031152\|Ga0307501_10109702	Not Available	708	Open in IMG/M
3300031152\|Ga0307501_10229671	Not Available	544	Open in IMG/M
3300031824\|Ga0307413_12055325	Not Available	516	Open in IMG/M
3300031852\|Ga0307410_10518115	Not Available	984	Open in IMG/M
3300031901\|Ga0307406_11844304	Not Available	538	Open in IMG/M
3300031903\|Ga0307407_10796555	Not Available	719	Open in IMG/M
3300031911\|Ga0307412_12161119	Not Available	518	Open in IMG/M
3300031938\|Ga0308175_100517947	Not Available	1271	Open in IMG/M
3300031938\|Ga0308175_100821128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1018	Open in IMG/M
3300031938\|Ga0308175_100853192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	999	Open in IMG/M
3300031938\|Ga0308175_101485144	Not Available	757	Open in IMG/M
3300031939\|Ga0308174_11481658	Not Available	582	Open in IMG/M
3300031995\|Ga0307409_101624208	Not Available	675	Open in IMG/M
3300031996\|Ga0308176_11006808	Not Available	879	Open in IMG/M
3300031996\|Ga0308176_11035041	Not Available	867	Open in IMG/M
3300031996\|Ga0308176_12034312	Not Available	614	Open in IMG/M
3300031996\|Ga0308176_12126010	Not Available	600	Open in IMG/M
3300032002\|Ga0307416_100732921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1080	Open in IMG/M
3300032002\|Ga0307416_102432776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	623	Open in IMG/M
3300032126\|Ga0307415_102018356	Not Available	562	Open in IMG/M
3300033550\|Ga0247829_11292274	Not Available	604	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	53.02%
Host-Associated	Host-Associated	46.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.68%
Plants	Host-Associated → Plants	46.98%
Aquatic	Environmental → Aquatic	1.34%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.01%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.16%
Rhizoplane	Host-Associated → Plants → Rhizoplane	22.82%
Freshwater	Environmental → Aquatic → Freshwater	1.34%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.79%
Loam	Environmental → Terrestrial → Soil → Loam	17.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	16.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.04%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.37%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.34%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	16.78%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	13.42%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.37%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.36%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.67%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	13.42%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	10.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	6.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	6.04%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.37%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.70%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	3.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.36%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.01%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.01%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.34%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.34%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.34%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.34%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.67%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.67%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.67%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.67%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010146	Soil microbial communities from California, USA to study soil gas exchange rates - JR-CA-SND metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012508	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.old.270510	Host-Associated	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026899	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Iowa-Corn-GraphCirc_00951830	2140918013	Soil	RGERFTDVEDAINASDLSTDEKSALWLLGWSYVHPRAQRREANAHLTRLAAATPLQTISSRRHLRVAG
ICChiseqgaiiDRAFT_23127991	3300000033	Soil	MRPNHSVPGSGPIEAMRQEVERRMLRGERFTDVEDAINASDHSADEKAALWLLGWSYVHPRAQRREANAHLAALTPATPRPPTISRRLRVVP*
ICChiseqgaiiFebDRAFT_144176842	3300000363	Soil	MCSIETMRLDVERRMRRGERFTDVEDAINASDLSTDEKSALWLLGWSYVHPRAQRREANAHLTRLAAATPLQTISSRRHLRVAG*
JGI10216J12902_1034488062	3300000956	Soil	MIMSTVEAMRLEVDRRMLRGERFSDVEDIINASDLSTEEKSALLLLGWSYVHPRAQRREANAHLSRLTAATPPKTSRPRRHLRVAG*
JGI10216J12902_1128400712	3300000956	Soil	MRPNQTDPATGPIEAMRQEVERRMLRGERFTDVENTIDSSAYSADEKAALWLLGWSYVHPRAQRREANAHLAALTPATPRPPTISRRLRVVP*
C688J18823_100164376	3300001686	Soil	MPSIETMRLDVEQRMRRGERFTDVEDVINASDLAAEEKSALWLLAWSYVHPRAQRREAIAHLDHLTAATSPPATNRRRHLRVAG*
C688J18823_100989584	3300001686	Soil	MTSSTSSTLEAMRLDVQRRMHRGERFADVEDVIDATSLSSDEKSALWLLAWSYVHPRAQRREANAHISRLAAATPKPV
C688J18823_101327982	3300001686	Soil	MRNDTDTGPLPLEAMRLQVERQMRRGERFARVEDLIDATDLSSDEKSALWLLAWSYVHPNAQRREATAHLARLVAASRPPAIDRARHLRIAG*
C688J18823_104903262	3300001686	Soil	MRPNQTDPASGPIEVMRQEVERRMMRGERFTDVEDAISSSDYSADEKAALWLLGWSYVHPRAQRREANAHLAALTAATPRPTTISRRRLRVVP*
C688J18823_106119663	3300001686	Soil	MRSIETMRLDVERRMRRGERFTDVEDVINASDLAADEKSALWLLGWSYVHPRAQRREAIAHLDHMTATTRPPATDRPRHLRV
C688J35102_1177628172	3300002568	Soil	MTGATLEAMRLDVERRMRRGERFTDVEDMIGASSLSNDEKSALWLLAWSYVHPRAQRREANAHISRLTAATPAAALRAGRRHLRLAR*
C688J35102_1188379552	3300002568	Soil	MYLIETMRLDVERRMRRGERFADVEDVIDASDLATDEKSALWLLAWSYVHPKAQRREANAHLDHLTAATSPPATNRKRHLGIAG*
C688J35102_1195713112	3300002568	Soil	MRPNQTDPASGPIEVMRQEVERRMMRGERFTDVEDAISSSDYSADEKAALWLLGWSYVHPRAQRREANAHLAALTAATPRPTTISRRRLR
C688J35102_1198824542	3300002568	Soil	MTGSTLEAMRLDVERRMLRGERFSDVEDVIDAASLSSEEKSALWLLAWSYVHPRAQRREANAHIGRLTAATPAPKVRARRRHLRVAG*
C688J35102_1202045272	3300002568	Soil	DVERRMRRGERFADVEDVIDASDLATEEKSALWLLAWSYVHPKAQRREAIAHLDHLTAATSPPATTRKRHLRVAG*
C688J35102_1203579871	3300002568	Soil	MRHDTATDRTALEAMRLEVERRMHRGERFAVVEDLIDATDLSADEKAALWLLGWSYVHPSAQRREATAHLARLTATTRPPAIARARHLHIAG*
C688J35102_1206005522	3300002568	Soil	MTGSSLEAMRLDVERRMLRGERFTDVEDVIDATSLSSDEKSALWLLAWSYVHPKAQRREANAHIGRLAAATPARRTRARRRHLRVAG*
C688J35102_1208158562	3300002568	Soil	MRPNQTDPASGSIEAMRQEVERRMLRGERFTDVEDAISSSDCSADEKAALWLLSWSYVHPRAQRREANAHLAALTPATPRPTSISRRRLRVVP*
C688J35102_1209012744	3300002568	Soil	MTMSTLETMRLEVEQRMRRGERFTDVEDVIDASDLSTDEKSALWLLAWSYVHPRAQRRQANAHLSRLAVARPPRPIRSRRHLRVAR*
Ga0063454_1000137083	3300004081	Soil	MRPSRTVPPRSRPVSAGSVTLSPLERVREEVERRMRRGDRFTDVEGMIDAADLSTDEKSALWLLGWSYVHPSAQRREAHAHLTHLTGSTPPTPQSRRHLRVAG*
Ga0063454_1000301725	3300004081	Soil	MRGRFAEAPTARDRDPVDALETMRLEVERRMRRGDRFIDVEEAIEASDLPDNEKAALWLLGWSYVHPRAQRREALAHLQALIAPAPPARRRLRHLRIAG*
Ga0063454_1013248572	3300004081	Soil	MTGSSLEAMRLDVERRMLRGERFTDVEDVIDATSLSSDEKSALWLLAWSYVHPKAQRREANAHIGRLAAATPARRTRARRRHLRVA
Ga0063455_1002944583	3300004153	Soil	MTSSTSSTLEAMRLDVQRRMHRGERFADVEDVIDATSLSSDEKSALWLLAWSYVHPRAQRREANAHISRLAAATPKPVPARRRHLRVAG*
Ga0063455_1009003562	3300004153	Soil	MTSSTLEAMRLDVERRMRRGERFTDVEDVIGESSLSSDEKSALWLLAWSYVHPRAQRREANAHISRLTAATAAPTLRARRRHLRVAR*
Ga0063455_1014938261	3300004153	Soil	LDVERRMRRGERFTDVEDMIGASSLSNDEKSALWLLAWSYVHPRAQRREANAHISRLTAATPAAALRAGRRHLRLAR*
Ga0063356_1001246962	3300004463	Arabidopsis Thaliana Rhizosphere	MTMSTVEAMRLEVERRMRRGERFTDVEDAINASDLSTDEKSALWLLGWSYVHPRAQRREANAHLTRLAAATPLQTISSRRHLRVAG*
Ga0068869_1016246052	3300005334	Miscanthus Rhizosphere	RMRLGERFTDVEDVIEACALPAEEKSALWLLAWSYVHPRAQRREANAHLSRLTAAPPPPPDDDARRLRIAG*
Ga0068868_1002979851	3300005338	Miscanthus Rhizosphere	MCSIETMRLDVERRMRRGERFTDVEDVIDASDLAADEKSALWLLGWSYVHPRAQRREAIAHVDSLTAPTSPPATNGRRHLRVAG*
Ga0068868_1003866812	3300005338	Miscanthus Rhizosphere	VHSLEAMRLDVERRMRRGERFTEVEDVIDATDLSADEKAALWLLGWSYVHPRAQRREALAHFEHLMATTPRAPNRRARHLRIAG*
Ga0070689_1008687151	3300005340	Switchgrass Rhizosphere	MGHEVERRMLRGERFTDVEDAINSSDLSADEKAALWLLGWSYVHPRAQRREAIAHVDSLAAPTSPPATNGRRHLRVAG*
Ga0070705_1014820181	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	RRGERFTDVEDVIDASDLAADEKSALWLLGWSYVHPRAQRREAIAHVDSLTAPTSPPATNERRHLRVAG*
Ga0070700_1019844131	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	AMRLHVERRMRRGERFTEVEDVIDATDLSADEKAALWLLGWSYVHPRAQRREALAHFEHLMATTPRAPNRRARHLRIAG*
Ga0068856_1014590613	3300005614	Corn Rhizosphere	VRSLEATWLDVERRMRRGERFTEVEDAIDAGDLEDDEKAALWLLGWSYVHPRAQRREALAHLEDLLARAPRTPSRPS
Ga0068852_1002471592	3300005616	Corn Rhizosphere	MRLDVERRMRRGERFTEVEDVIDATDLSADEKAALWLLGWSYVHPRAQRREALAHFEHLMATTPRAPNRRARHLRIAG*
Ga0068859_1020264781	3300005617	Switchgrass Rhizosphere	MRRGERFTEVEDVIDATDLSADEKAALWLLGWSYVHPRAQRREALAHFEHLMATTPRAPNRRARHLRIAG*
Ga0068859_1028147272	3300005617	Switchgrass Rhizosphere	MCSIETMRLEVERRMRRGERFTDVEDVINASDLAADEKSALWLLGWSYVHPSAQRREAIAHVDSLTAPTSPPATNGRRHLRVAG*
Ga0068866_100918641	3300005718	Miscanthus Rhizosphere	LDVERRMRRGERFTDVENVIDSSDLSTDEKSALWLLGWSYVHPRAQRREAHAHLSRMTAATSAPRNGSGRHLHIAS*
Ga0068861_1000384164	3300005719	Switchgrass Rhizosphere	MTMATVEAMRLEVERRMRRGERFTDVEEVIDASGLSADEKSALWLLGWSYVHPRAQRREANAHIRRMTGVTPPKTISSRRRLRLAG*
Ga0068861_1026917791	3300005719	Switchgrass Rhizosphere	MCSIETMKLEVERRMRRGERFTDVEDVINASDLAADEKSALWLLGWSYVHPRAQRREAIAHVDRLTAATTAPPVNRPRRHLRVAG*
Ga0066652_1005686162	3300006046	Soil	MSTVGAMRLEIERRMRRGERFTDVEDVIDASDLSTDEKSALWLLGWSYVHPRAQRREANAHLSQLTAARPPRTLISGRHLRVAG*
Ga0068865_1015701102	3300006881	Miscanthus Rhizosphere	MCSIETMRLDVERRMRRGERFTDVEDVIDASDLAADEKSALWLLGWSYVHPRAQRREAIAHVDSLTAPTSPPATNERRHLRVAG*
Ga0111539_102183863	3300009094	Populus Rhizosphere	MCSIETMRLDVERRMRRGERFTDVEDVIDASDLAADEKSALWLLGWSYVHPRAQRREAIAYVDSLSAATSPPATNRKRHLRIAG*
Ga0105245_120517352	3300009098	Miscanthus Rhizosphere	ERFTDVENVIDSSDLSTDEKSALWLLGWSYVHPRAQRREAHAHLSRMTAATSAPPNGSGRHLHIAS*
Ga0105243_100993385	3300009148	Miscanthus Rhizosphere	VIVRSLEATWLDVERRMRRGERFTEVEDAIDASDLGDDEKAALWLLGWSYVHPRAQRREALAHLEDLLARAPRTPSRPSRHLRIAPLGR
Ga0105243_102837821	3300009148	Miscanthus Rhizosphere	MTRSIEAMRLDVERRMRRGERFTDVENVIDSSDLSTDEKSALWLLGWSYVHPRAQRREAHAHLSRMTAATSAPPNGSGRHLHIAS*
Ga0105243_114032221	3300009148	Miscanthus Rhizosphere	MCSIETMRLDVERRMRRGERFTDVEDVIDASDLAADEKSALWLLGWSYVHPRAQRREAIAHVDSLTAPTSPAATYGRRHLRVAG*
Ga0105238_115349341	3300009551	Corn Rhizosphere	MRLDVERRMRRGERFTEVEDVIDATDLSADEKAALWLLGWSYVHPRAQRREALAHFEHLMPTTPRAPNRRARHLRIAG*
Ga0105249_116015991	3300009553	Switchgrass Rhizosphere	MCSIETMKLEVERRMRRGERFTDVEDVINASDLAADEKSALWLLGWSYVHPRAQRREAIAHVDSLTAPTSPPATNGRRHLRVAG*
Ga0126307_107995913	3300009789	Serpentine Soil	MRYIETMRLDVERRMRRGERFTDVEDVISASDLPADEKSALWLLGWSYVHPRAQRREAIAHLDHLSAATPPPAVNRPRHLRLA
Ga0126307_111511061	3300009789	Serpentine Soil	MRLIETMRLDVERRMKRGERFIDVEDVINASELSADEKSALWLLGWSYVHPRAQRREANAHLTRLTAATPPPAVRSGRHLRVAG*
Ga0126307_111822031	3300009789	Serpentine Soil	MYSIEMMRLDVERRMRRGERFTDVEDVINASDLAADEKSALWLLAWSYVHPRAQRREATAHLDHLTAATSPPATNRKRHLRIAG*
Ga0126307_115507001	3300009789	Serpentine Soil	RGERFTDVEDVINASDLAADEKSALWLLAWSYVHPRAQRREASARLDHLTAATSPPASNRTRHLRVAG*
Ga0126313_100012323	3300009840	Serpentine Soil	MRYIETMRLDVERRMRRGERFTDVEDVISASDLPADEKSALWLLGWSYVHPRAQRREAIAHLDHLSAATPPPAVNRPRHLRLAR*
Ga0126313_104541741	3300009840	Serpentine Soil	MCSIETMRLDVERRMRRGERFTDVEDVIDASDLAADEKSALWLLAWSYVHPRAQRRQAIAHLDHLTAATSPPASNRKRHLRVAG*
Ga0126313_106179562	3300009840	Serpentine Soil	MGVIETMQLHVERRMRRGERFTDVEDVINASDLSADEKSALWLLGWSYVHPRAQRREAIAHVDHLSAATPPPAINRPRHLRVAG*
Ga0126315_111984801	3300010038	Serpentine Soil	MCSIETMRLDVERRMRRGERFTDVEDVINASDLAADEKSALWLLAWSYVHPRAQRRQAIAHLDHLTAATSPPATNRRRHLRVAG*
Ga0126309_101046373	3300010039	Serpentine Soil	MGFIETMQLDVERRMRRGERFTDVEDMINASDLSADEKSALWLLGWSYVHPRAQRREAIAHLDHLSAATPPPAINRPRHLRVAG*
Ga0126312_101553213	3300010041	Serpentine Soil	RLDVERRMRRGERFTDVEDVIDASDLAADEKSALWLLAWSYVHPRAQRREAIAHLDHLTAATSPPATNRKRHLRIAG*
Ga0126312_103017401	3300010041	Serpentine Soil	MRYIETMRLDVERRMRRGERFTDVEDVINASDLAADEKSALWLLAWSYVHPRAQRREAIAHVDRLTAATSPPAINRQRHLRVAG*
Ga0126312_108899301	3300010041	Serpentine Soil	MGVIETMQLDVERRMRRGERFTDVEDVINASDLSADEKSALWLLGWSYVHPRAQRREAIAHLDRLSAATPPPAINRPRHLRVAG*
Ga0126314_112770091	3300010042	Serpentine Soil	VTLMRDIETMRLDVERRMRGGERFSDVEDVVNASDLCDDEKAALWLLAWSFLHPRAQRREAIAHLERLSAATPPSAVDRRHLRAIG*
Ga0126310_106849412	3300010044	Serpentine Soil	RRMRRGERFTDVEDVISASDLPADEKSALWLLGWSYVHPRAQRREAIAHLDHLSAATPPPAVNRPRHLRLAR*
Ga0126320_12964002	3300010146	Soil	MCSIEAMRRDVERRMRRGERFSDVEDVVNASDLCDDEKAALWLLAWSFLHPRAQRREAIAHLERLSAATPPSAVDRRRHLRAIG*
Ga0126306_111312091	3300010166	Serpentine Soil	MRPLEAMRQEVERRMLRGERFSDVEDAIDSSGLSADEKAALWLLGWSYVHPRAQRREANAHLTSLTPVRPPRAMSSRKRLRVV
Ga0126306_113697471	3300010166	Serpentine Soil	VLGALFGVWLGYPILDPLAAMRQEIERRMLRGERFTDVEDAISSSEFSADEQAALWLLGWSYVHPKAQRREANAHLTALTAATPPRTLSARRRLRIVR*
Ga0105239_132732431	3300010375	Corn Rhizosphere	MCSIETMRLDVDRRMRRGERFTDVEDVINASDLAADEKSALWLLGWSYVHPRAQRREAIAHVDRLTAATTAPPVNRPRRHLRVAG*
Ga0134126_121975311	3300010396	Terrestrial Soil	RGERFTDVENVIDSSDLSTDEKSALWLLGWSYVHPRAQRREAHAHLSRMTAATSAPPNGSGRHLHIAS*
Ga0134122_111348102	3300010400	Terrestrial Soil	MTMWTVEGMRLDVERRMRRGERFTDVEDVINASDLSTDEKSALWLLAWSYVHPRAQRREANAHLRGMTGATPPRAISSRRRLRVAG*
Ga0134121_120217922	3300010401	Terrestrial Soil	MCSIETMRLDVERRMRRGERFTDVEDVINASDLAADEKSALWLLGWSYVHPRAQRREAIAHVDSLTAPTSPPATNGRRHLRVAG*
Ga0138505_1000463691	3300010999	Soil	MRPNQAYPAAGSIEAMRQEVERRMLRGERFTDVEAAIDASDYSADEKAALWLLGWSYVHPRAQRREANAHLAALKAATPRPTTIPPRRLRVVP*
Ga0126317_104957322	3300011332	Soil	MRDVETMRLDVERRMRRGERFSDVEDVVNASDLCDDEKAALWLLAWSFLHPRAQRREAIAHLERLSAATPPPAVDRRRYLRAIG*
Ga0150985_1026160391	3300012212	Avena Fatua Rhizosphere	MRRGDRFTDVEGMIDATDLSTDEKSALWLLGWSYVHPSAQRREAHAHLTHLTGSTPPTPQARRHLRVAG
Ga0150985_1092565282	3300012212	Avena Fatua Rhizosphere	MRPNQTDPASGPIEAMRQDVERRMLRGERFTDVEDVISSSDCSADEKAALWLLGWSYVHPRAQRREANAHLAALMAGTPRPTPIARRRLRVVP*
Ga0150985_1154135832	3300012212	Avena Fatua Rhizosphere	VTLMRDIETMRLDVERRMRRGERFSDVEDVVNASDLCDDEKAALWLLAWSFLHPRAQRREAIAHIERLSAARPPSALDRRRHLRAIG*
Ga0150985_1158758262	3300012212	Avena Fatua Rhizosphere	MCSIETMRLDVERRMRRGERFTDVEDVINASDLAADEKSALWLLAWSYVHPRAQRREAIAHLDHLTAATSPPATNRRRHLRVAG*
Ga0150985_1190457061	3300012212	Avena Fatua Rhizosphere	MRPIEAMRQQVERRMLRGERFTDIEDAIDSSEFSADEKTALWLLGWSYVHPRAQRREANAHLTALTAADPPRTMVSGPRLRVVR*
Ga0150984_1092473082	3300012469	Avena Fatua Rhizosphere	VTLTRDIETMRLDVERRMRRGERFSDVEDVVNASDLCDDEKAALWLLAWSFLHPRAQRREAIAHLERLSAATPPPAVDRRR
Ga0150984_1147877992	3300012469	Avena Fatua Rhizosphere	MRPNQTDPASGPIEAMRQDVERRMLRGERFTDVEDVISSSDCSADEKAALWLLGWSYVHPRAQRREANAHLAALTAPTPLPTT
Ga0150984_1168674692	3300012469	Avena Fatua Rhizosphere	MRLDVERRMRRGERFTDVEDVINASDLAADEKSALWLLAWSYVHPRAQRREAIAHLDHLTAATSPPASKRKRHLRVAG*
Ga0150984_1198391792	3300012469	Avena Fatua Rhizosphere	MRPNQTDPASGPIEAMRQEVERRMLRGERFTDVEDAISSSECSADEKAALWLLGWSYVHPRAQRREANAHLAALTAATPPTSIARRRLRVVLSGSPPAETSPGSGDRFL
Ga0157315_10779601	3300012508	Arabidopsis Rhizosphere	MRPNQTDPTTGPIEAMRQEVERRMLRGERFTDVENTIDSSAHSADEKAALWLLGWSYVHPRAQRREANAHLAALTPATPRPPTI
Ga0157283_101508771	3300012907	Soil	MRPNQTDPGTGPIEAMRQEVERRMLRGERFTDVENTIDSSAYSADEKAALWLLGWSYVHPRAQRREANAHLAALTPATPRPPTISRRLRVVP*
Ga0157301_102319181	3300012911	Soil	MRPNQTDPATGPIEAMRQEVERRMRRGERFTDVENTIDSSAYSADEKAALWLLGWSYVHPRAQRREANAHLAALTPATPRPPTISRRLRVVP*
Ga0157301_104376721	3300012911	Soil	MTMATVEAMRLEVERRMRRGERFTDVEEVIDASGLSTDEKSALWLLGWSYVHPRAQRREANAHLTALAAATPPRRLSARRRLRIVR*
Ga0157302_100876372	3300012915	Soil	MRQEVERRMLRGERFTDVENTIDSSAYSADEKAALWLLGWSYVHPRAQRREANAHLAALTPATPRPPTISRRLRVVP*
Ga0157302_104677291	3300012915	Soil	MRPNQTDPASGPIEAMRQEVERRMLCGERFTDVEDAISSSDCSADGKAALWLLGWSYVHPKAQRREANAHLTALKAATPPRTLSARRRLRIVR*
Ga0157378_127479011	3300013297	Miscanthus Rhizosphere	RRVTERPFEAMGHEVERRMLRGERFTDVEDAINSSDLSADEKAALWLLGWSYVHPRVQRREANAHLTALTAATPPRTSTSRRHLRILP*
Ga0157372_127571601	3300013307	Corn Rhizosphere	PVETMRREVEQRMRRGERFTDVEDVIDASDLPAEEKSALWLLGWSYVHPRAQRREANAHLSRLAAATPPPAVGHARHLRVLG*
Ga0182008_104624732	3300014497	Rhizosphere	MCSIETMRLDVERRMRRGERFTDVEDVINASDLAADEKSALWLLGWSYVHPRAQRREAIAHVDGLMAATSPPAINRRRHLRVAG*
Ga0157377_116390021	3300014745	Miscanthus Rhizosphere	MCSIETMRLEVERRMRRGERFADVEDVINASDLAADEKSALWLLGWSYVHPRAQRREAIAHLDHLTAATPSPAINRPRHLRVAG*
Ga0173483_105775821	3300015077	Soil	VTSSAILDPLDATRQDVERRMLRGERFTAVEDAINSSEFSSDEKAALWLLAWSFVHPRAQRREANAHLAALTAATPPRTLSSRRRLRIVP*
Ga0132258_106078402	3300015371	Arabidopsis Rhizosphere	MRPNQSDPASGPIEAMRQEVERRMLRGERFTDVEDAIDASDHSADEKAALWLLGWSYVHPRAQRREANAHLAALTPATPRPPTISRRLRVVP*
Ga0132258_114690394	3300015371	Arabidopsis Rhizosphere	MIGSPLEAMRLDVERRMRRGERFADVEHVIDASGLSTDEKSALWLLGWSYVHPRAQRREANAHLKRMTTAAPPEKTGARGHLRIAG*
Ga0132256_1006460441	3300015372	Arabidopsis Rhizosphere	MRPNQTDPATGPIEAMRQEVERRMLRGERFTDVENTIDSSAYSADEKAALWLLGWSYVHPRAQRREANAHLAALTPATPRPTTISRRLRVVP*
Ga0132256_1012302631	3300015372	Arabidopsis Rhizosphere	MGSIETMRLDVERRMRRGERFTDVEDVINGSDLTADEKSALWLLGWSYVHPRAQRREAIAHVDSLTAATSPPATNRKRHLRIAG*
Ga0132257_1003476431	3300015373	Arabidopsis Rhizosphere	MRPNQTDPATGPIEAMRQEVERRMLRGERFTDVENTIDSSAHSADEKAALWLLGWSYVHPRAQRREANAHLAALTPATPRPPTISRRLRVVP*
Ga0132255_1063024731	3300015374	Arabidopsis Rhizosphere	MRPNQTDPATGPIEAMRQEVERRMLRGERFTDVEDAIDASDHSADEKAALWLLGWSYVHPRAQRREAHAHLAALTAATPRPTTNSQRRLR
Ga0190266_106441652	3300017965	Soil	MCSIETMRLDVERRMRRGERFTDVEDVINASDLAADEKSALWLLGWSYVHPRAQRREAIAHVDGLMAATSPPAINRRRHLRIAG
Ga0173481_100197043	3300019356	Soil	MRPNQTDPATGPIEAMRQEVERRMLRGERFTDVENTIDSSAYSADEKAALWLLGWSYVHPRAQRREANAHLAALTPATPRPPTISRRLRVVP
Ga0207688_101399461	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MCSIETMRLDVERRMRRGERFTDVEDVIDASDLAADEKSALWLLGWSYVHPSAQRREAIAHVDRLTAATTAPPVNRPRRHLRVAG
Ga0207687_114922171	3300025927	Miscanthus Rhizosphere	MCSIETMRLDVERRMRRGERFTDVEDVINASDLAADEKSALWLLGWSYVHPRAQRREAIAHVDSLTAPTSPPATNGRRHLRVAG
Ga0207687_118313842	3300025927	Miscanthus Rhizosphere	ERFTDVENVIDSSDLSTDEKSALWLLGWSYVHPRAQRREAHAHLSRMTAATSAPPNGSGRHLHIAS
Ga0207690_111901631	3300025932	Corn Rhizosphere	VRSLEATWLDVERRMRRGERFTEVEDAIDASDLEDDEKAALWLLGWSYVHPRAQRREALAHLEDLLARAPRTPSRPSRHLRIAPLG
Ga0207686_105613621	3300025934	Miscanthus Rhizosphere	MRLDVERRMRRGERFTDVENVIDSSDLSTDEKSALWLLGWSYVHPRAQRREAHAHLSRMTAATSAPPNGSGRHLHIAS
Ga0207686_113922652	3300025934	Miscanthus Rhizosphere	MCSIETMRLDVERRMRRGERFTDVEDVIDASDLAADEKSALWLLGWSYVHPRAQRREAIAHVDSLTAPTSPPALPGLR
Ga0207709_106999943	3300025935	Miscanthus Rhizosphere	VLMRLDVERRMRRGERFTDVEDVIDASDLAADEKSVLWLLGWSYVHPRAQRREAIAHVDSLTAPTSPPATNGRRHLR
Ga0207709_109137491	3300025935	Miscanthus Rhizosphere	VRSLEATWLDVERRMRRGERFTEVEDAIDASDLEDDEKAALWLLGWSYVHPRAQRREALAHLEDLLARAPRTPSRPSRHLRI
Ga0207704_105200282	3300025938	Miscanthus Rhizosphere	MCSIETMRLDVERRMRRGERFTDVEDVIDASDLAADEKSALWLLGWSYVHPRAQRREAIAHVDHLMTATSAPPVNRPRRHLRVAG
Ga0207689_105634582	3300025942	Miscanthus Rhizosphere	RMRLGERFTDVEDVIEACALPAEEKSALWLLAWSYVHPRAQRREANAHLSRLTAAPPPPPDDDARRLRIAG
Ga0207661_115186961	3300025944	Corn Rhizosphere	MCSIETMRLEVERRMRRGERFTDVEDVINASDLAADEKSALWLLGWSYVHPRAQRREAIAHVDSLTAPTSPPATNGRRHLRVAG
Ga0207712_110268871	3300025961	Switchgrass Rhizosphere	MCSIETMKLEVERRMRRGERFTDVEDVIDASDLAADEKSALWLLGWSYVHPRAQRREAIAHVDSLTAPTSPPATNGRRHLRVAG
Ga0207703_102349653	3300026035	Switchgrass Rhizosphere	MRLDVERRMRRGERFTEVEDVIDATDLSADEKAALWLLGRSYVHPRAQRREALAHFEHLMATTPRAPNRRARHLRIAG
Ga0207703_114414971	3300026035	Switchgrass Rhizosphere	MCSIETMRLEVERRMRRGERFTDVEDVINASDLAADEKSALWLLGWSYVHPRAQRREAIAHVDHLMTATSPPPVNRPRRHL
Ga0207678_102930211	3300026067	Corn Rhizosphere	VLMRLDVERRMRRGERFTDVEDVIDASDLAADEKSALWLLGWSYVHPRAQRREAIAHVDSLTAPTSPPATNGRRH
Ga0207708_119086011	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VLMRLDVERRMRRGERFTDVEDVIDASDLAADEKSALWLLGWSYVHPRAQRREAIAHVDSLTAPTSPPATNGRRHLRVAR
Ga0207702_105987652	3300026078	Corn Rhizosphere	MRLDVERRMRRGERFTEVEDVIDATDLSADEKAALWLLGWSYVHPRAQRREALAHFEHLMATTPRAPNRRARHLRIAG
Ga0207648_119257332	3300026089	Miscanthus Rhizosphere	MCSIETMRLDVERRMRRGERFTDVEDVINASDLAADEKSALWLLGWSYVHPSAQRREAIAHVDRLTAATTAPPVNRPRRHLRVAG
Ga0207675_1001501093	3300026118	Switchgrass Rhizosphere	MTMATVEAMRLEVERRMRRGERFTDVEEVIDASGLSADEKSALWLLGWSYVHPRAQRREANAHIRRMTGVTPPKTISSRRRLRLAG
Ga0207675_1011775961	3300026118	Switchgrass Rhizosphere	MCSIETMKLEVERRMRRGERFTDVEDVINASDLAADEKSALWLLGWSYVHPRAQRREAIAHVDRLTAATTAPPVNRPRRHLRVAG
Ga0207698_102999921	3300026142	Corn Rhizosphere	MCSIETMRLDVERRMRRGERFTDVEDVIDASDLAADEKSALWLLGWSYVHPRAQRREAIAHVDSLTAPT
Ga0207698_104472662	3300026142	Corn Rhizosphere	MCSIETMRLEVERRMRRGERFTDVEDVINASDLAADEKSALWLLGWSYVHPSAQRREAIAHVDRLTAATTAPPVNRPRRHLRVAG
Ga0209152_103872462	3300026325	Soil	NDTDTGPLPLEAMRLEVERRMRRGERFARVEDLIDATDLSSDEKSALWLLAWSYVHPNAQRREATAHLARLAAATRPPAIDRARHLRIAG
Ga0209326_10053572	3300026899	Forest Soil	MCSIETMRLDVERRMRRGERFTDVDDVMDASDLAADEKSALWLLGWSYVHPRAQRREAIAHVDSLTAPTSPPATNGRRHLRVAG
Ga0209966_11737682	3300027695	Arabidopsis Thaliana Rhizosphere	MRLEVERRMRRGERFTDVEEVINASGLSIDEKSALWLFGWSYVHPRAQRREANAHIRSMTGVTPPKTISSRRRLRVAG
Ga0307276_101940982	3300028705	Soil	MRNDTDTSLLPLEAMRLEVERRMQRGERFSDVEDLIDATDLSPDERSALWLLAWSYVHPSAQRREATAHLARLTAAARPPAIERARHLRVAG
Ga0308204_100282811	3300031092	Soil	MCSIETMRLDVERRMRRGERFTDVEDAIDASDLAAGPKSALWLLAWSYVHPRAQRREASAHLDHLTAAISPPATNRKRHLRIAG
Ga0307501_100285662	3300031152	Soil	MRNDTDTRPLPLEAMRLEVERRMRRGERFARVEDLIDATDLSPDEKSALWLLAWSYVHPNAQRREATAHLARLAAATRPPAIDRARHLRIAG
Ga0307501_100838531	3300031152	Soil	MCSIETMRLDVERRMRRGERFTDVEDVINASDLAADEKSALWLLAWSYVHPRAQRREAIAHLDHLTAAISPPAINRRRHLRVAG
Ga0307501_101097021	3300031152	Soil	MTMSTVEGMRLDVERRMRRGERFTDVEDVINASDLSTDEKSALWLLGWSYVHPRAQRREAHTHLSRMTGATPPKKISSHRHLRVAG
Ga0307501_102296711	3300031152	Soil	MCSIETMQLDVERRMRRGERFTDVEDVINASDLAADEKAALWLLAWSYVHPKAQRREAIAHLDRLTPAISPPAINRRRHLRVAG
Ga0307413_120553251	3300031824	Rhizosphere	VTMRPLEAMRQEVERRMLRGERFSDVEDAIDSSGLSADEKAALWLLGWSYVHPRAQRREANAHLAALTRANPPRIMGSARRLRIVR
Ga0307410_105181153	3300031852	Rhizosphere	MYSIETMRLDVERRMRRGERFADVEDVINASDLAADEKSALWLLAWSYVHPRAQRREAIAHLDHMTGVTPPPAINRHRHLRVAG
Ga0307406_118443042	3300031901	Rhizosphere	MCSIETMRLDVERRMRRGERFTDVEDVINASDLAADEKSALWLLAWSYVHPRAQRREAIAHVDRLTAATSPPAINRQRHLRVAG
Ga0307407_107965551	3300031903	Rhizosphere	MYSIETMRLDVERRMRRGERFADVEDVINASDLAADEKSALWLLAWSYVHPRAQRREAIAHVDRLTAATSPPAINRQRHLRVAG
Ga0307412_121611192	3300031911	Rhizosphere	MCSIETMRLDVERRMRRGERFTEVEKAIDSSDLSADEKTALWLLGWSYVHPRAQRREANAHLAALTRANPPRIMGSARRLRIVR
Ga0308175_1005179471	3300031938	Soil	MCSIETMRLDVERRMRRGERFTDVEDVINASDLAADEKSALWLLGWSYVHPRAQRREAIAHVDGLMAATSPPAINRRRHLRVAG
Ga0308175_1008211282	3300031938	Soil	MTGSIVEAMRLDVERRMRRGERFTDVENVINSSDLSSDEKSALWLLAWSYVHPRAQRREANAHLHRMMTAPPPRTNGAQRHLRIAR
Ga0308175_1008531921	3300031938	Soil	MRHDTDTGPLPLEAMRVEVERRMRRGERFADVEDLIDATDLSSDEKSALWLLAWSYVHPNAQRREATAHLARLVAARRPPAIDRARHLRIAG
Ga0308175_1014851441	3300031938	Soil	MYSIETMRLDVERRMRRGERFADVEDVIDASDLATDEKSALWLLAWSYVHPRAQRREASAHLDHLTAATSPPTTNRK
Ga0308174_114816582	3300031939	Soil	MRNDTDTGPLPLEAMRLEVERRMRRGERFARVEDLIDATDLSSDEKSALWLLAWSYVHPNAQRREATAHLARLVAASRPPAIDRARHLRIAG
Ga0307409_1016242082	3300031995	Rhizosphere	MYSIETMRLDVERRMRRGERFADVEDVIDASDLATDEKSALWLLAWSYVHPRAQRREASAHLDHLTAATSPPATNRKRHLR
Ga0308176_110068081	3300031996	Soil	IETMRLDVEQRMRRGERFTDVEDVINTSDLAAEEKSALWLLAWSYVHPSAQRREAIAHLDHLTAATSPPATNRRRHLRVAG
Ga0308176_110350412	3300031996	Soil	MCSIETMRLDVERRMRRGERFADVEDVIDASDLATDEKSALWLLAWSYVHPRAQRREAIAHLDHLTAATSPPTTNRKRHLRVAG
Ga0308176_120343122	3300031996	Soil	MTGSIVEAMRLDVERRMRRGERFTDVENVINSSDLSSDEKSALWLLAWSYVHPRAQRREANAHLRRMMAATPPRPNGSQRHLRIARQRSGPRAGASRGGQRSA
Ga0308176_121260101	3300031996	Soil	MRNDTDTGPLPLEAMRLEVERRMRRGERFADVEALIDATDLSSDEKSALWLLAWSYVHPNAQRREATAHLARLAAATRPPAIDRARHLRIAG
Ga0307416_1007329211	3300032002	Rhizosphere	MRRGERFTDVEDAINASDLSADEKSALWLLGWSYVHPRAQRREAIAHLDHLSAATPPPAVNRRRHLRVAG
Ga0307416_1024327762	3300032002	Rhizosphere	AMRQQVERRMLRGERFTDIEDAIDSSDFSADEKTALWLLGWSYVHPRAQRREANAHLTALTAADPPRTMVSGRRLRVVR
Ga0307415_1020183561	3300032126	Rhizosphere	MYSIETMRLDVERRMRRGERFADVEDVIDASDLATDEKSVLWLLAWSYVHPRAQRREAIAHLDHLTAATSPPATNRRRHLRVAG
Ga0247829_112922741	3300033550	Soil	GMTMATVEAMRLEVERRMRRGERFTDVEEVIDASGLSADEKSALWLLGWSYVHPRAQRREANAHIRRMTGVTPPKTISSRRRLRLAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F047522

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences