Metagenome / Metatranscriptome Family F047524

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F047524
Family Type	Metagenome / Metatranscriptome
Number of Sequences	149
Average Sequence Length	47 residues
Representative Sequence	MLGRLQDRTGSPNLRTRVLAACVIVGLVVLTAPLAVLPLVHWLARFL
Number of Associated Samples	90
Number of Associated Scaffolds	149

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	24.16 %
% of genes near scaffold ends (potentially truncated)	34.23 %
% of genes from short scaffolds (< 2000 bps)	84.56 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (63.758 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere (12.752 % of family members)
Environment Ontology (ENVO)	Unclassified (47.651 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (61.745 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.33% β-sheet: 2.67% Coil/Unstructured: 48.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 149 Family Scaffolds
PF00012	HSP70	55.03
PF13183	Fer4_8	8.05
PF00692	dUTPase	1.34
PF01556	DnaJ_C	0.67
PF00293	NUDIX	0.67
PF07504	FTP	0.67
PF12728	HTH_17	0.67
PF13581	HATPase_c_2	0.67
PF14019	DUF4235	0.67
PF01940	DUF92	0.67

COG ID	Name	Functional Category	% Frequency in 149 Family Scaffolds
COG0443	Molecular chaperone DnaK (HSP70)	Posttranslational modification, protein turnover, chaperones [O]	55.03
COG0717	dCTP deaminase	Nucleotide transport and metabolism [F]	1.34
COG0756	dUTP pyrophosphatase (dUTPase)	Defense mechanisms [V]	1.34
COG0484	DnaJ-class molecular chaperone with C-terminal Zn finger domain	Posttranslational modification, protein turnover, chaperones [O]	0.67
COG1836	Cytidylyltransferase family enzyme	General function prediction only [R]	0.67
COG3227	Zn-dependent metalloprotease (Neutral protease B)	Posttranslational modification, protein turnover, chaperones [O]	0.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.76 %
Unclassified	root	N/A	36.24 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.76 %
Unclassified	root	N/A	36.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.76 %
Unclassified	root	N/A	36.24 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	62.42 %
Unclassified	root	N/A	36.24 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	61.74 %
Unclassified	root	N/A	36.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.24 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	34.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.24 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	7.38 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	4.70 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.01 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.34 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	1.34 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.24 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	7.38 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	2.01 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.34 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	1.34 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.34 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.24 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	7.38 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1.34 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.34 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.34 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1.34 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.24 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	7.38 %
Mycobacterium tuberculosis complex	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex	1.34 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1.34 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.34 %
Streptomyces fradiae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces fradiae	0.67 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.24 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	7.38 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	1.34 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1.34 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.34 %
Streptomyces fradiae ATCC 10745 = DSM 40063	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces fradiae → Streptomyces fradiae ATCC 10745 = DSM 40063	0.67 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001205\|C688J13580_1043976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	592	Open in IMG/M
3300001686\|C688J18823_10710523	Not Available	639	Open in IMG/M
3300002568\|C688J35102_118280429	Not Available	545	Open in IMG/M
3300002568\|C688J35102_118514949	Not Available	567	Open in IMG/M
3300002568\|C688J35102_118617111	Not Available	577	Open in IMG/M
3300002568\|C688J35102_119795380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	777	Open in IMG/M
3300002568\|C688J35102_120652644	All Organisms → cellular organisms → Bacteria	1299	Open in IMG/M
3300003321\|soilH1_10181284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1134	Open in IMG/M
3300003324\|soilH2_10083865	Not Available	1199	Open in IMG/M
3300004114\|Ga0062593_100444174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1179	Open in IMG/M
3300004480\|Ga0062592_100078527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1945	Open in IMG/M
3300005093\|Ga0062594_101656344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	666	Open in IMG/M
3300005177\|Ga0066690_10683272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	681	Open in IMG/M
3300005187\|Ga0066675_11273003	Not Available	543	Open in IMG/M
3300005327\|Ga0070658_10000415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	36949	Open in IMG/M
3300005327\|Ga0070658_10151840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1939	Open in IMG/M
3300005327\|Ga0070658_10231592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1564	Open in IMG/M
3300005327\|Ga0070658_10409718	Not Available	1165	Open in IMG/M
3300005327\|Ga0070658_11587010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	567	Open in IMG/M
3300005329\|Ga0070683_100091144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2862	Open in IMG/M
3300005329\|Ga0070683_100148429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2223	Open in IMG/M
3300005329\|Ga0070683_102222418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	527	Open in IMG/M
3300005330\|Ga0070690_100021114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3973	Open in IMG/M
3300005334\|Ga0068869_100089221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	2315	Open in IMG/M
3300005336\|Ga0070680_100310483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1338	Open in IMG/M
3300005336\|Ga0070680_100346670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1263	Open in IMG/M
3300005336\|Ga0070680_101199010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	657	Open in IMG/M
3300005336\|Ga0070680_101241795	Not Available	645	Open in IMG/M
3300005339\|Ga0070660_100269365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1392	Open in IMG/M
3300005339\|Ga0070660_101100205	Not Available	673	Open in IMG/M
3300005366\|Ga0070659_100005424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9157	Open in IMG/M
3300005366\|Ga0070659_100477168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1061	Open in IMG/M
3300005435\|Ga0070714_101490523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	661	Open in IMG/M
3300005435\|Ga0070714_102441371	Not Available	508	Open in IMG/M
3300005454\|Ga0066687_10962394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	509	Open in IMG/M
3300005458\|Ga0070681_11193220	Not Available	683	Open in IMG/M
3300005524\|Ga0070737_10285982	Not Available	656	Open in IMG/M
3300005529\|Ga0070741_10046107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5438	Open in IMG/M
3300005529\|Ga0070741_10133712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2530	Open in IMG/M
3300005530\|Ga0070679_101091745	Not Available	743	Open in IMG/M
3300005535\|Ga0070684_102104854	Not Available	532	Open in IMG/M
3300005560\|Ga0066670_10304432	Not Available	970	Open in IMG/M
3300005563\|Ga0068855_102516758	Not Available	512	Open in IMG/M
3300005575\|Ga0066702_10505655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	735	Open in IMG/M
3300005587\|Ga0066654_10104102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1377	Open in IMG/M
3300005587\|Ga0066654_10248436	Not Available	937	Open in IMG/M
3300005607\|Ga0070740_10184693	Not Available	882	Open in IMG/M
3300006034\|Ga0066656_10161312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1408	Open in IMG/M
3300006046\|Ga0066652_100109980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2241	Open in IMG/M
3300006881\|Ga0068865_101063798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	711	Open in IMG/M
3300009093\|Ga0105240_10625777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1182	Open in IMG/M
3300009098\|Ga0105245_10738556	Not Available	1020	Open in IMG/M
3300009098\|Ga0105245_10815025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	972	Open in IMG/M
3300009098\|Ga0105245_11007090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	878	Open in IMG/M
3300009098\|Ga0105245_12215175	Not Available	603	Open in IMG/M
3300009174\|Ga0105241_11084043	Not Available	753	Open in IMG/M
3300009176\|Ga0105242_11083021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	814	Open in IMG/M
3300009545\|Ga0105237_10605856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1102	Open in IMG/M
3300009551\|Ga0105238_12242330	Not Available	581	Open in IMG/M
3300010373\|Ga0134128_12119820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	619	Open in IMG/M
3300010375\|Ga0105239_11931884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	685	Open in IMG/M
3300010396\|Ga0134126_10607318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1251	Open in IMG/M
3300012955\|Ga0164298_11067770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	602	Open in IMG/M
3300012972\|Ga0134077_10283046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	693	Open in IMG/M
3300012977\|Ga0134087_10104468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1190	Open in IMG/M
3300012989\|Ga0164305_11508655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	596	Open in IMG/M
3300013100\|Ga0157373_10874179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	666	Open in IMG/M
3300013102\|Ga0157371_10719614	Not Available	748	Open in IMG/M
3300013104\|Ga0157370_10152674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2149	Open in IMG/M
3300013105\|Ga0157369_10073826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3659	Open in IMG/M
3300013105\|Ga0157369_10274229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1757	Open in IMG/M
3300013105\|Ga0157369_10956592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	878	Open in IMG/M
3300013105\|Ga0157369_11425238	Not Available	705	Open in IMG/M
3300013297\|Ga0157378_10162456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	2090	Open in IMG/M
3300013307\|Ga0157372_11012893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	962	Open in IMG/M
3300013307\|Ga0157372_11547198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	764	Open in IMG/M
3300013307\|Ga0157372_12447591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	599	Open in IMG/M
3300013307\|Ga0157372_12560766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	586	Open in IMG/M
3300013307\|Ga0157372_13171588	Not Available	524	Open in IMG/M
3300014150\|Ga0134081_10043438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1330	Open in IMG/M
3300014166\|Ga0134079_10403610	Not Available	636	Open in IMG/M
3300015068\|Ga0167645_111312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	904	Open in IMG/M
3300015356\|Ga0134073_10222663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	638	Open in IMG/M
3300015371\|Ga0132258_11068398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2040	Open in IMG/M
3300015372\|Ga0132256_102415921	Not Available	628	Open in IMG/M
3300018431\|Ga0066655_10964562	Not Available	587	Open in IMG/M
3300018468\|Ga0066662_10012522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4484	Open in IMG/M
3300018468\|Ga0066662_10224607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1509	Open in IMG/M
3300018468\|Ga0066662_11763880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces fradiae → Streptomyces fradiae ATCC 10745 = DSM 40063	648	Open in IMG/M
3300019890\|Ga0193728_1299968	Not Available	610	Open in IMG/M
3300020069\|Ga0197907_10934393	Not Available	650	Open in IMG/M
3300020069\|Ga0197907_11049030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	994	Open in IMG/M
3300020075\|Ga0206349_1112359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3334	Open in IMG/M
3300020081\|Ga0206354_10635630	Not Available	702	Open in IMG/M
3300020081\|Ga0206354_10685734	Not Available	559	Open in IMG/M
3300020081\|Ga0206354_11693992	Not Available	683	Open in IMG/M
3300020082\|Ga0206353_10480455	Not Available	710	Open in IMG/M
3300020082\|Ga0206353_10776395	Not Available	1024	Open in IMG/M
3300020082\|Ga0206353_10804626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1297	Open in IMG/M
3300020082\|Ga0206353_10840961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	913	Open in IMG/M
3300020082\|Ga0206353_11659158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1106	Open in IMG/M
3300020082\|Ga0206353_11698378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	824	Open in IMG/M
3300021184\|Ga0196959_10070319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	760	Open in IMG/M
3300021362\|Ga0213882_10005122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4551	Open in IMG/M
3300021362\|Ga0213882_10076816	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1339	Open in IMG/M
3300021377\|Ga0213874_10205535	Not Available	710	Open in IMG/M
3300021953\|Ga0213880_10027312	Not Available	1304	Open in IMG/M
3300022467\|Ga0224712_10007391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3197	Open in IMG/M
3300022467\|Ga0224712_10012933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2644	Open in IMG/M
3300022467\|Ga0224712_10312536	Not Available	737	Open in IMG/M
3300022467\|Ga0224712_10627833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	526	Open in IMG/M
3300025909\|Ga0207705_10008106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7696	Open in IMG/M
3300025909\|Ga0207705_10238881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1383	Open in IMG/M
3300025909\|Ga0207705_10463960	Not Available	982	Open in IMG/M
3300025909\|Ga0207705_10805814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	729	Open in IMG/M
3300025912\|Ga0207707_10000071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	102604	Open in IMG/M
3300025912\|Ga0207707_10044597	All Organisms → cellular organisms → Bacteria	3866	Open in IMG/M
3300025912\|Ga0207707_10320761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1338	Open in IMG/M
3300025912\|Ga0207707_10347390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1278	Open in IMG/M
3300025912\|Ga0207707_10729338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	830	Open in IMG/M
3300025913\|Ga0207695_10975383	Not Available	727	Open in IMG/M
3300025914\|Ga0207671_10426511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1055	Open in IMG/M
3300025917\|Ga0207660_10563452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	927	Open in IMG/M
3300025917\|Ga0207660_10652740	Not Available	858	Open in IMG/M
3300025917\|Ga0207660_10977511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	691	Open in IMG/M
3300025919\|Ga0207657_10388287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1099	Open in IMG/M
3300025919\|Ga0207657_10507930	Not Available	944	Open in IMG/M
3300025919\|Ga0207657_10511730	Not Available	940	Open in IMG/M
3300025919\|Ga0207657_10741479	Not Available	761	Open in IMG/M
3300025927\|Ga0207687_11847677	Not Available	517	Open in IMG/M
3300025929\|Ga0207664_11891293	Not Available	519	Open in IMG/M
3300025938\|Ga0207704_11561905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	567	Open in IMG/M
3300025944\|Ga0207661_10168853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1903	Open in IMG/M
3300025949\|Ga0207667_10116596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2752	Open in IMG/M
3300025949\|Ga0207667_10783778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	951	Open in IMG/M
3300025949\|Ga0207667_11164977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	752	Open in IMG/M
3300026089\|Ga0207648_11278095	Not Available	689	Open in IMG/M
3300026308\|Ga0209265_1033948	Not Available	1578	Open in IMG/M
3300026550\|Ga0209474_10540331	Not Available	592	Open in IMG/M
3300027766\|Ga0209796_10027333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1711	Open in IMG/M
3300027766\|Ga0209796_10035394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1498	Open in IMG/M
3300030515\|Ga0268254_10046171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1352	Open in IMG/M
3300031679\|Ga0318561_10436962	Not Available	720	Open in IMG/M
3300031938\|Ga0308175_100707789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1094	Open in IMG/M
3300031938\|Ga0308175_101235961	Not Available	831	Open in IMG/M
3300031938\|Ga0308175_102437954	Not Available	586	Open in IMG/M
3300031996\|Ga0308176_12208646	Not Available	588	Open in IMG/M
3300032008\|Ga0318562_10628196	Not Available	620	Open in IMG/M
3300032895\|Ga0335074_10165999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	2761	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	61.75%
Host-Associated	Host-Associated	38.26%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.75%
Plants	Host-Associated → Plants	38.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.53%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.04%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	2.01%
Phylloplane	Host-Associated → Plants → Phylloplane	2.01%
Roots	Host-Associated → Plants → Roots	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.26%
Loam	Environmental → Terrestrial → Soil → Loam	20.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.45%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.08%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.37%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	2.01%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	2.01%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.67%
Sand	Environmental → Terrestrial → Soil → Sand	0.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.67%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.08%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.07%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.37%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.70%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.36%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.68%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	2.01%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	2.01%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.34%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.67%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.67%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	12.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	11.41%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	10.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	8.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.38%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.03%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.36%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.01%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.01%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	2.01%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	2.01%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.34%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.34%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.67%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.67%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.67%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001205	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005524	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen10_05102014_R1	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005607	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015068	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8C, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021184	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021953	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R07	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027766	Agave microbial communities from Guanajuato, Mexico - Or.Sf.rz (SPAdes)	Host-Associated	Open in IMG/M
3300030515	Agave microbial communities from Guanajuato, Mexico - Or.Sf.rz (v2)	Host-Associated	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J13580_10439761	3300001205	Soil	MLGRLQDRSGSPNLRTRVLAAAVIIGLIVLTAPLAVLPVVH
C688J18823_107105231	3300001686	Soil	GGPRLRVRVLAALVIVGMVVLTAPLVVLPVSHLLARLF*
C688J35102_1182804291	3300002568	Soil	MLGRLQDRRGTPNLRTRALAALVVLGLVVLTAPLVVLPVAHWLGRVL*
C688J35102_1185149491	3300002568	Soil	MLGRLQDRRGEPRTRVRVLAALVIVGMVVLTSPLVLVPVARWLITFL*
C688J35102_1186171111	3300002568	Soil	SAFPAYAPAMLGRLQDRSGSPNLRTRLLAGAVIVGLVVLTAPLAVLPVVHWLARFL*
C688J35102_1197953802	3300002568	Soil	MLRQLQDRRGGPRLRVRVLAALVIVGMVVLTAPLVVLPVSHLLARLF*
C688J35102_1206526442	3300002568	Soil	MLGRLQDRRGEPNIRVRVLAALVIVGLVVLTAPLAVLPVL
soilH1_101812842	3300003321	Sugarcane Root And Bulk Soil	VLGRLQDRTGAPNLRTRLLAAAVIVGLVILTAPLAVLPVVHWLARFI*
soilH2_100838651	3300003324	Sugarcane Root And Bulk Soil	MLGRLQDRRGEPRFRVRLLAALVIVGMVVLTAPLVVVPLVGWLADHL*
Ga0062593_1004441742	3300004114	Soil	MLGRLQDRRGEPRARVRVLAALVIVGMLLLTAPLVLVPVTRWLLSFL*
Ga0062592_1000785271	3300004480	Soil	QGSAAYAPAMLGRLQDRRGEPRFRVRLLAALVIVGMVVLTAPLVVVPLVGWLADHL*
Ga0062594_1016563441	3300005093	Soil	MLGRLQDRRGEPNLRTRALAGLVVLGLVVLTAPLVVMPLLGWLARML*
Ga0066690_106832722	3300005177	Soil	MLGRLQDRRGEPRLRARVLAALVIAGMLLLTAPLVLVPVVRWMFGFL*
Ga0066675_112730032	3300005187	Soil	ARPAPYASAMLGQLQDRRGEPNLRTRVLAALVVAGLVVLTAPLVVLPVAHWLSRML*
Ga0070658_1000041510	3300005327	Corn Rhizosphere	MLGRLQDRTGAPNLRTRLLAAAVVVGLVVLTAPLVVLPIAHWLARLL*
Ga0070658_101518402	3300005327	Corn Rhizosphere	VLGRLQDSRGEPNLRTRALAALVIVGLVVLTAPLVVLPVVHLLARLF*
Ga0070658_102315922	3300005327	Corn Rhizosphere	MLGRLQDRTGSPNLRTRVLAACVIVGLVVLTAPLAVLPLVHWLARFL*
Ga0070658_104097182	3300005327	Corn Rhizosphere	GRLQDRTGSPNLRTRLLAAAVIVGMVVLTAPLAVLPLLHWLAQLL*
Ga0070658_115870102	3300005327	Corn Rhizosphere	YARMVLGRLQDRTGAPNLRTRLLAAAVIVGLVILTAPLAVLPVVHWLAHIL*
Ga0070683_1000911442	3300005329	Corn Rhizosphere	MLGRLQDRTGAPHRGTRLLAGAVIVGLVVLTAPLAVLPVVHWLTHFV*
Ga0070683_1001484292	3300005329	Corn Rhizosphere	MLGRLQDRRGEPRLRVRLLAALVVAGLVLLTAPLALIPVVRWLFGFL*
Ga0070683_1022224182	3300005329	Corn Rhizosphere	MLGRLQDRTGSPNLRTRVLAACVIVGLVVLTAPLAVLPLV
Ga0070690_1000211143	3300005330	Switchgrass Rhizosphere	VLGRLQDSRGAPNLRTRVLAALVIVGLVVLTAPLVVLPLVHLLARIL*
Ga0068869_1000892213	3300005334	Miscanthus Rhizosphere	VLGRLQDSRGEPNLRTRVLAALVIVGLVVLTAPLVVLPLVHLLARLL*
Ga0070680_1003104832	3300005336	Corn Rhizosphere	MLGRLQDRTGSPNARTRVFAAAVIIGMIVLTAPLAVLPVVHWLARFL*
Ga0070680_1003466702	3300005336	Corn Rhizosphere	MVLGRLQDRTGAPNLRTRLLAAAVIVGLVILTAPLAVLPVVHWLAHIL*
Ga0070680_1011990102	3300005336	Corn Rhizosphere	MLGRLQDRTGSPNLRTRLLAAAVIVGMVVLTAPLAVLPLLHWLAQLL*
Ga0070680_1012417951	3300005336	Corn Rhizosphere	MLGRLQDRRGAPRLRVRVLAALVIVGMIVLTAPLVVVPLAGWLADHL*
Ga0070660_1002693652	3300005339	Corn Rhizosphere	QDSRGEPNLRTRALAALVIVGLVVLTAPLVVLPVVHLLARLF*
Ga0070660_1011002051	3300005339	Corn Rhizosphere	MLGRLQDRTGSPNLRTRLLAGAVIVGLVVLTAPLAVLPVVHWLARFL*
Ga0070659_1000054247	3300005366	Corn Rhizosphere	MGPVLGRLQDSRGEPNLRTRALAALVIVGLVVLTAPLVVLPVVHLLARLF*
Ga0070659_1004771682	3300005366	Corn Rhizosphere	MLGRLQDRTGSPNLRTRVLAACVIIGLLVLTAPLAVLPLVHWLARFL*
Ga0070714_1014905232	3300005435	Agricultural Soil	MLGRLQDRTGSPHRGTRLLAGAVIVGLVVLTAPLAVLPVVHWLVQVL*
Ga0070714_1024413712	3300005435	Agricultural Soil	MLGQLQNRRGRPNLRTRVLAALVVLGLIVLTAPLVVLPLMHLLAAVL*
Ga0066687_109623942	3300005454	Soil	LGRLQDRRGEPRLRARVLAALVIAGMLLLTAPLVLVPVVRWMFGFL*
Ga0070681_111932202	3300005458	Corn Rhizosphere	TLRAMLGRLQDRRGEPRARVRVLAALVIVGMLLLTAPLVLVPVTRWVLSFL*
Ga0070737_102859821	3300005524	Surface Soil	VPVGDALGPAAAYRPGMLGRLQDRRGEPNARVRVLAAMVIVGLVVLTAPLVVIPVTAWVAHHL*
Ga0070741_100461072	3300005529	Surface Soil	VQFVLGRLQDTRGEPRLRVRVLAALVVLGLLVLTAPLVMVPLIDWLSSHL*
Ga0070741_101337122	3300005529	Surface Soil	MLGRLQDRRGEPNLRTRALAALVIVGLLILTAPLVVVPLVSWLSRVL*
Ga0070679_1010917452	3300005530	Corn Rhizosphere	QDRTGAPRRGTRLLAGAVIVGLVVLTAPLAVLPVVHWFTHFV*
Ga0070684_1021048541	3300005535	Corn Rhizosphere	MLGRLQDRTGSPNLRTRVLAACVIIGLIVLTAPLAVLPLVHWLARFL*
Ga0066670_103044322	3300005560	Soil	MLGRLQDRRGEPTARVRVLAALVIVGLVVLTAPLAVLPALHWLARFI*
Ga0068855_1025167582	3300005563	Corn Rhizosphere	VLGRLQDRRGAPSLRTRAMAALVILGMIVLTAPLVVVPFVGWVTHHLL*
Ga0066702_105056552	3300005575	Soil	MLGRLQDRTGSPNLRTRVLAACVIIGLVILTAPLAVLPVVHWLMRLL*
Ga0066654_101041021	3300005587	Soil	DRSGSPNLRTRVLAAAVIIGLIVLTAPLAVLPVVHWLVHVL*
Ga0066654_102484362	3300005587	Soil	PAMLGRLQDRTGSPNVRTRLLAAAVIVGLIVLTAPLAVLPVVHWLARFL*
Ga0070740_101846932	3300005607	Surface Soil	VPAGVVVRDDGLMLGQLQNGRGEPNLRTRVLAALVIVGLLVLTAPLVVLPLAHLLAQIL*
Ga0066656_101613121	3300006034	Soil	AYAPTMLGRLQDRSGSPNLRTRVLAAAVIIGLIVLTAPLAVLPVVHWLVHVL*
Ga0066652_1001099802	3300006046	Soil	LRQLQGRQGRPNLRTRLLAALVVVGLVVLTAPLVVLPVAHWLAGL*
Ga0068865_1010637982	3300006881	Miscanthus Rhizosphere	MLGRLQDRTGSPNLRTRVLAAAVIIGLIVLTAPLAVLPVVHWLAHVL*
Ga0105240_106257772	3300009093	Corn Rhizosphere	MLGRLQDRTGSPNLRTRLLAGAVVVGLIVLTAPLAVLPVLHWLAQFV*
Ga0105245_107385562	3300009098	Miscanthus Rhizosphere	LQDSRGEPNLRTRVLAALVIVGLVVLTAPLVVLPLVHLLARLL*
Ga0105245_108150252	3300009098	Miscanthus Rhizosphere	MLGRLQDRRGVPRLRVRVLAALVIAGMLILTAPLALVPVVRWMFGFL*
Ga0105245_110070902	3300009098	Miscanthus Rhizosphere	MLGRLQDRTGSPNLRTRLLAAAVVVGLIVLTAPLAVLPVVHWLAQLF*
Ga0105245_122151752	3300009098	Miscanthus Rhizosphere	MLGRLQDRRGEPRTRVRVLAALVIVGMIVLTAPLVLIPVTQWLFSFL*
Ga0105241_110840432	3300009174	Corn Rhizosphere	MLGQLQNQRGQPNLRTRALAALVIVGLLVLTAPLIVLPLVHLLARIL*
Ga0105242_110830212	3300009176	Miscanthus Rhizosphere	VLGRLQDRRGDPNLRTRVIAALVIVGLVVLTAPLVVLPLAHLLARML*
Ga0105237_106058562	3300009545	Corn Rhizosphere	MLGQLQNRRGQPNLRTRLTAALVVLGLIVLTAPLVVLPLAHLLARIL*
Ga0105238_122423301	3300009551	Corn Rhizosphere	APTMLGRLQDRTGSPNLRTRVLAGCVIIGLVVLTAPLAVLPLVHWLARFL*
Ga0134128_121198201	3300010373	Terrestrial Soil	VLGRLQDRTGAPNLRTRLLAAAVIVGLVILTAPLAVLPVVHWL
Ga0105239_119318842	3300010375	Corn Rhizosphere	MLGRLQNRRGEPTLRVRALAALVVIGLVVLTAPLVV
Ga0134126_106073182	3300010396	Terrestrial Soil	MLGRLQDRTGAPNVRTRMLAAAVVIGMVILTAPLVVLPIVHWLAHLL*
Ga0164298_110677702	3300012955	Soil	MLGRLQDRTGSPNVRTRWLAAAVIVGLIVLTAPLAVLPV
Ga0134077_102830462	3300012972	Grasslands Soil	MLGRLQDRTGSPNLRTRLLAGAVIVGLVVLTAPLAVLPVVHWLAHVL*
Ga0134087_101044682	3300012977	Grasslands Soil	MLGRLQDRTGSPNLRTRVLAAAVIIGLIVLTAPLAVLPVVHWLVHVL*
Ga0164305_115086551	3300012989	Soil	RTAYAPAMLGRLQDRRGEPRLRVRVLAALVIVGMVVLTAPLVVFPVVSWLADHL*
Ga0157373_108741792	3300013100	Corn Rhizosphere	MLGRLQDRRGEPRTRVRVLAALVIAGMVLLTSPLVLIPVVRWLVGFL*
Ga0157371_107196141	3300013102	Corn Rhizosphere	MLGRLQDRTGSPHRGTRLLAGAVIVGLVVLTAPLAVLPLVHWLVQVL*
Ga0157370_101526742	3300013104	Corn Rhizosphere	MLGRLQDRRGEPRLRSRVLAALVIVGLLLLTAPLALIPVVRWLFGFL*
Ga0157369_100738262	3300013105	Corn Rhizosphere	MLGQLQDRRGRPNLRTRALAALVIVGLVVLTAPLVVLPVVHLLARIL*
Ga0157369_102742292	3300013105	Corn Rhizosphere	MAAYAPDMLGRLQDRTGAPNVRTRMLAAAVVIGMVILTAPLVVLPIVHWLAHLL*
Ga0157369_109565922	3300013105	Corn Rhizosphere	MLGRLQDRTGAPNLRTRLLAAAVVVGLVVLTAPIVVLPIVHWLARLL*
Ga0157369_114252382	3300013105	Corn Rhizosphere	MLGRLQDRQGAPNVRTRLLAVLVILGMLVLTAPLVVVPVAGWLSRFL*
Ga0157378_101624562	3300013297	Miscanthus Rhizosphere	MGPVLGRLQDSRGEPNLRTRALAALVIVVLLVLTAPLVVLPVVHLLARLF*
Ga0157372_110128932	3300013307	Corn Rhizosphere	MLGRLQDRRGEPRMRVRVLAALVIAGMVLLTSPLVLIPVVRWLVTLL*
Ga0157372_115471981	3300013307	Corn Rhizosphere	MLGRLQDRTGSPHRGTRLLAGAVIVGLVVLTAPLAVLPVVHWLVHVL*
Ga0157372_124475912	3300013307	Corn Rhizosphere	MLGRLQDRRGEPRLRVRVLAALVIVGMVVLTAPLVVFPVLSWLADHL*
Ga0157372_125607662	3300013307	Corn Rhizosphere	MLGRLQDRTGAPNLRTRLLAAAVVVGLVVLTAPLVVLPIAHWLARL
Ga0157372_131715881	3300013307	Corn Rhizosphere	MLGRLQDRTGSPNVRTRLLAAAVIVGLVVLTAPLAVLPVLHWLAQFL*
Ga0134081_100434382	3300014150	Grasslands Soil	MLGRLQDRSGSPNLRTRVLAAAVIIGLIVLTAPLAVLPVVHWLVHVL*
Ga0134079_104036102	3300014166	Grasslands Soil	YSSAVLRQLQGRQGRPNLRTRLLAALVVVGLVVLTAPLVVLPVAHWLAGL*
Ga0167645_1113122	3300015068	Glacier Forefield Soil	MLGRLQDRRGEPRLRVRLLAALVIAGMVLLTAPLALIPVARWIVGFL*
Ga0134073_102226632	3300015356	Grasslands Soil	MLGRLQDRTGSPNLRTRVLAACVIIGLVILTAPLAVLPVVHWLM
Ga0132258_110683981	3300015371	Arabidopsis Rhizosphere	MLPALRDPRGKPSLEVRLLAGLVVLGMVVLTAPLVVVP
Ga0132256_1024159212	3300015372	Arabidopsis Rhizosphere	YASAMLGRLQDRRGEPRLRVRVLAALVIAGMVLLTAPLALVPVVRWLMALL*
Ga0066655_109645622	3300018431	Grasslands Soil	PNLRTRALAACVIIGLVVLTAPLAVLPLVHWLARFL
Ga0066662_100125222	3300018468	Grasslands Soil	MLGRLQDRTGSPNLRTRVLAGAVIVGLIVLTAPLAVLPVLHWLARYL
Ga0066662_102246072	3300018468	Grasslands Soil	VLGRLQDRTGSPNLRTRLLAAAIVVGLIVLTAPLAVLPLVHWLARFL
Ga0066662_117638801	3300018468	Grasslands Soil	VPWRAAYAPVMLGRLQDRTGSPNLRTRALAACVILGLVILTAPLAVLPVVHWLARFL
Ga0193728_12999682	3300019890	Soil	MLGRLQNRTGEPNARTRALAALVIIGLLVLTAPLVMIPLVGWLARVL
Ga0197907_109343931	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	RTGAPNLRTRLLAAAVVVGLVVLTAPLVVLPVAHWLARLL
Ga0197907_110490302	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MLGRLQDRTGSPNLRTRVLAACVIVGLVVLTAPLAVLPLVHWLARFL
Ga0206349_11123591	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	LQDRTGAPNVRTRMLAAAVVIGMVILTAPLVVLPIVHWLAHLL
Ga0206354_106356302	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	LQDRTGSPNLRTRVLAACVIIGLLVLTAPLAVLPLVHWLARFL
Ga0206354_106857342	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	QDFLHRTLNPPRAYAPAMLGRLQDRRGEPRARVRFLAGLVIVGMIVLTAPLAVVPLVGWLADHL
Ga0206354_116939922	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MMGRLQDRRGEPNLRTRALAGIVVLGMVVLTAPLVVLPVLRWLLRMV
Ga0206353_104804552	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MLGRLQDRTGSPNLRTRVLAACVIIGLIVLTAPLAVLPLVHWLARFL
Ga0206353_107763951	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MLGRLQDRTGAPNVRTRMLAAAVVIGMVILTAPLVVLPIVHWLAHLL
Ga0206353_108046262	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MLGRLQNRRGEPTLRVRALAALVLIGMLVLTAPLIVLPVVHWIARFI
Ga0206353_108409612	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	VAGLATYARPVLGRLQDRRGEPNLRTGALAALVIVGMVVLTAPLVVFPIAHWIARLV
Ga0206353_116591581	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MLGRLQDRRGEPRARVRFLAGLVIVGMIVLTAPLAVVPLVGWLADHL
Ga0206353_116983782	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MMGRLQDRRGEPNLRTRALAGIVVLGMVVLTAPLVVLPVL
Ga0196959_100703192	3300021184	Soil	MLSRLRDRRGEPSYRTRFLAALVVVGLVVLTAPVIVLPIVRGVAELLR
Ga0213882_100051223	3300021362	Exposed Rock	MLGRLQDRRGEPNLRVRLTAALVIVGLVVLTAPIVMIPIINWLSERF
Ga0213882_100768161	3300021362	Exposed Rock	MLGRLQDRRGEPNLRTRVLAALVIVGLVILTAPLVVVPLVGWLSRVL
Ga0213874_102055352	3300021377	Plant Roots	VGPPYAGLVLGRLQNRRGAPNLRARVLAALVIAGLLVLTAPLVVLPIVRWLAQIL
Ga0213880_100273122	3300021953	Exposed Rock	LVLGRLQNRRGAPNLRARVLAALVIAGLLVLTAPLVVLPIVRWLAQIL
Ga0224712_100073911	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	QDRTGAPNVRTRMLAAAVVIGMVILTAPLVVLPIVHWLAHLL
Ga0224712_100129331	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	LAQLQNRRGEPNLRTRLLAALVILGLLVLTAPLIVLPVVQWLARVL
Ga0224712_103125362	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	KSWAAYAPAMLGRLQDRRGEPNLRTRALAGLVVLGLVVLTAPLVVMPLLGWLARML
Ga0224712_106278331	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MLGRLQDRTGSPHRGTRLLAGAVIVGLVVLTAPLAVLP
Ga0207705_100081062	3300025909	Corn Rhizosphere	MLGRLQDRTGAPNLRTRLLAAAVVVGLVVLTAPLVVLPIAHWLARLL
Ga0207705_102388812	3300025909	Corn Rhizosphere	MGPVLGRLQDSRGEPNLRTRALAALVIVGLVVLTAPLVVLPVVHLLARLF
Ga0207705_104639601	3300025909	Corn Rhizosphere	SPPSAYAPKMLGRLQDRTGSPNLRTRLLAAAVIVGMVVLTAPLAVLPLLHWLAQLL
Ga0207705_108058142	3300025909	Corn Rhizosphere	MLGRLQDRRGEPRARVRVLAALVIVGMLLLTAPLVLVPVTRWLLSFL
Ga0207707_10000071115	3300025912	Corn Rhizosphere	MLGRLQDRRGEPRLRVRLLAALVVAGLVLLTAPLALIPVVRWLFGFL
Ga0207707_100445973	3300025912	Corn Rhizosphere	MLGRLQDRRGEPNLRTRALAGLVVLGLVVLTAPLVVMPLLGWLARML
Ga0207707_103207612	3300025912	Corn Rhizosphere	MVLGRLQDRTGAPNLRTRLLAAAVIVGLVILTAPLAVLPVVHWLAHIL
Ga0207707_103473902	3300025912	Corn Rhizosphere	MGPVLGRLQDSRGEPNLRTRVLAALVIVGMVVLTAPLVVLPLVHLLARIL
Ga0207707_107293382	3300025912	Corn Rhizosphere	MLGRLQDRTGSPNARTRVFAAAVIIGMIVLTAPLAVLPVVHWLARFL
Ga0207695_109753832	3300025913	Corn Rhizosphere	MLGRLQDRTGSPNLRTRLLAGAVVVGLIVLTAPLAVLPVLHWLAQFV
Ga0207671_104265112	3300025914	Corn Rhizosphere	MLGQLQNRRGQPNLRTRLTAALVVLGLIVLTAPLVVLPLAHLLARIL
Ga0207660_105634522	3300025917	Corn Rhizosphere	MLGRLQDRTGSPNARTRVFAAAVIIGMIVLTAPLAVLPVVH
Ga0207660_106527402	3300025917	Corn Rhizosphere	MLGRLQDRRGAPRLRVRVLAALVIVGMIVLTAPLVVVPLAGWLADHL
Ga0207660_109775111	3300025917	Corn Rhizosphere	MLGRLQDRTGSPNLRTRLLAAAVIVGMVVLTAPLAVLPLLHWLAQLL
Ga0207657_103882872	3300025919	Corn Rhizosphere	MLGRLQDRTGSPNLRTRVLAACVIIGLLVLTAPLAVLPLVHWLARFL
Ga0207657_105079302	3300025919	Corn Rhizosphere	MGLVLGRLQDSRGEPNLRTRVLAALVIVGLVVLTAPLVVLPLVHLLARLL
Ga0207657_105117302	3300025919	Corn Rhizosphere	PRARVRVLAALVIVGMLLLTAPLVLVPVTRWLLSFL
Ga0207657_107414791	3300025919	Corn Rhizosphere	MLGRLQDRRGEPRMRVRVLAALVIAGMVLLTAPLVLVPVVRWLAALL
Ga0207687_118476771	3300025927	Miscanthus Rhizosphere	RLQDRRGEPRTRVRVLAALVIVGMIVLTAPLVLIPVTQWLFSFL
Ga0207664_118912931	3300025929	Agricultural Soil	MLGRLQDRRGHANLRTRALAALVVLGLVVLTAPLVVLPVLHWLARMF
Ga0207704_115619051	3300025938	Miscanthus Rhizosphere	SARSAYAPAMLGRLQDRTGSPNLRTRVLAAAVIIGLIVLTAPLAVLPVVHWLAHVL
Ga0207661_101688531	3300025944	Corn Rhizosphere	GAPHRGTRLLAGAVIVGLVVLTAPLAVLPVVHWLTHFV
Ga0207667_101165961	3300025949	Corn Rhizosphere	GQLQNRRGEPNLRTRLLAALVILGLLVLTAPLIVLPVVQWLARVL
Ga0207667_107837782	3300025949	Corn Rhizosphere	VLGRLQDRRGAPSLRTRAMAALVILGMIVLTAPLVVVPFVGWVTHHLL
Ga0207667_111649772	3300025949	Corn Rhizosphere	MLGRLQDRTGSPNLRTRLLAGAVIVGLVVLTAPLAVLPVVHWLARFL
Ga0207648_112780952	3300026089	Miscanthus Rhizosphere	MLARLQDRRGEPRTRVRVLAALVIVGMIVLIAPFVLIPVTQWLFSFL
Ga0209265_10339482	3300026308	Soil	DRSGSPNLRTRVLAAAVIIGLIVLTAPLAVLPVVHWLVHVL
Ga0209474_105403312	3300026550	Soil	MLGRLQDRRGEPRLRARVLAALVIAGMLLLTAPLVLVPVVRWMFGFL
Ga0209796_100273332	3300027766	Agave	VLGRLQDRTGSPNLRTRLLAAAVIVGMIILTAPLAVLPLVHWLARFL
Ga0209796_100353942	3300027766	Agave	MLGRLQDRRGEPNLRTRALAALVILGLVVLTAPLVMLPLLHWIARLV
Ga0268254_100461712	3300030515	Agave	RAASGPHRAPNLRTRVLAAAIIVGLVVLTAPLAVLPVVHWLAHML
Ga0318561_104369622	3300031679	Soil	VLSRLQDTRGEPNLRVRALALLVIVGLVVLTAPVVMVPLIEWLAHQI
Ga0308175_1007077892	3300031938	Soil	MLGRLQDRRGAPNLRTRALAGLVVLGMVVLTAPLVVLPVLHWFAGML
Ga0308175_1012359611	3300031938	Soil	GEPRARVRVLAALVIVGMLLLTAPLVLVPVTRWLLSFL
Ga0308175_1024379541	3300031938	Soil	LRRTAQAAGAGFATYARFVLGRLQDRRGDPNLRTRVLAALVILGMVVLTAPLVVFPIAHWIARLV
Ga0308176_122086462	3300031996	Soil	MLGRLQDRRGGPNLRTRLLAGVVVLGMVVLTAPLAVLPVLRWLTGML
Ga0318562_106281961	3300032008	Soil	LSRLQDTRGEPNLRVRALALLVIVGLVVLTAPVVMVPLIEWLAHQI
Ga0335074_101659993	3300032895	Soil	VLSRLQDTQGAPRIRVRLLAALVIVGLLVLTAPIVMVPLVGWLAHLA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F047524

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences