Metagenome / Metatranscriptome Family F047742

Basic Information
Family ID	F047742
Family Type	Metagenome / Metatranscriptome
Number of Sequences	149
Average Sequence Length	88 residues
Representative Sequence	VTGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS
Number of Associated Samples	128
Number of Associated Scaffolds	149

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	61.07 %
% of genes near scaffold ends (potentially truncated)	54.36 %
% of genes from short scaffolds (< 2000 bps)	82.55 %
Associated GOLD sequencing projects	120
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (61.074 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.423 % of family members)
Environment Ontology (ENVO)	Unclassified (40.940 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (61.745 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 18.28% Coil/Unstructured: 81.72%
Feature Viewer

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Pfam ID	Name	% Frequency in 149 Family Scaffolds
PF02624	YcaO	31.54
PF07812	TfuA	4.03
PF09084	NMT1	1.34
PF13191	AAA_16	1.34
PF03706	LPG_synthase_TM	1.34
PF13240	zinc_ribbon_2	0.67
PF00155	Aminotran_1_2	0.67
PF13379	NMT1_2	0.67
PF00475	IGPD	0.67
PF13248	zf-ribbon_3	0.67
PF01370	Epimerase	0.67
PF14824	Sirohm_synth_M	0.67
PF02403	Seryl_tRNA_N	0.67

COG ID	Name	Functional Category	% Frequency in 149 Family Scaffolds
COG1944	Ribosomal protein S12 methylthiotransferase accessory factor YcaO	Translation, ribosomal structure and biogenesis [J]	31.54
COG3482	Uncharacterized conserved protein	Function unknown [S]	4.03
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	1.34
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	1.34
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	1.34
COG0131	Imidazoleglycerol phosphate dehydratase HisB	Amino acid transport and metabolism [E]	0.67
COG0172	Seryl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.67

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.07 %
Unclassified	root	N/A	38.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.07 %
Unclassified	root	N/A	38.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.07 %
Unclassified	root	N/A	38.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	10.07 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	6.04 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.93 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.04 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.68 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.34 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.67 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.93 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	6.04 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.68 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.34 %
Legionellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales	0.67 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.93 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	6.04 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2.68 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.34 %
Legionellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae	0.67 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.93 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	6.04 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2.68 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.34 %
Legionella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella	0.67 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.93 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	6.04 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2.68 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.34 %
Legionella cherrii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella → Legionella cherrii	0.67 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0955224	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300001213\|JGIcombinedJ13530_102673764	Not Available	662	Open in IMG/M
3300001991\|JGI24743J22301_10006015	All Organisms → cellular organisms → Bacteria	2050	Open in IMG/M
3300002077\|JGI24744J21845_10027333	Not Available	1103	Open in IMG/M
3300003996\|Ga0055467_10074657	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	924	Open in IMG/M
3300004013\|Ga0055465_10342162	Not Available	521	Open in IMG/M
3300004156\|Ga0062589_101935599	Not Available	596	Open in IMG/M
3300005164\|Ga0066815_10023675	Not Available	876	Open in IMG/M
3300005327\|Ga0070658_10021149	All Organisms → cellular organisms → Bacteria	5211	Open in IMG/M
3300005328\|Ga0070676_10130851	All Organisms → cellular organisms → Bacteria → Proteobacteria	1586	Open in IMG/M
3300005329\|Ga0070683_100163967	All Organisms → cellular organisms → Bacteria → Proteobacteria	2108	Open in IMG/M
3300005331\|Ga0070670_100368704	All Organisms → cellular organisms → Bacteria → Proteobacteria	1264	Open in IMG/M
3300005333\|Ga0070677_10147640	Not Available	1091	Open in IMG/M
3300005334\|Ga0068869_100234840	All Organisms → cellular organisms → Bacteria	1458	Open in IMG/M
3300005334\|Ga0068869_102011248	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300005337\|Ga0070682_100016624	All Organisms → cellular organisms → Bacteria	4281	Open in IMG/M
3300005337\|Ga0070682_100723481	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	800	Open in IMG/M
3300005337\|Ga0070682_101483517	Not Available	582	Open in IMG/M
3300005338\|Ga0068868_100204331	All Organisms → cellular organisms → Bacteria	1648	Open in IMG/M
3300005338\|Ga0068868_101780940	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300005340\|Ga0070689_100077725	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2601	Open in IMG/M
3300005341\|Ga0070691_10453139	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300005345\|Ga0070692_10228925	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300005347\|Ga0070668_100513497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1039	Open in IMG/M
3300005354\|Ga0070675_100988244	All Organisms → cellular organisms → Bacteria → Proteobacteria	773	Open in IMG/M
3300005364\|Ga0070673_101866813	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300005366\|Ga0070659_101355975	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300005367\|Ga0070667_100630952	All Organisms → cellular organisms → Bacteria → Proteobacteria	988	Open in IMG/M
3300005441\|Ga0070700_100290875	All Organisms → cellular organisms → Bacteria → Proteobacteria	1188	Open in IMG/M
3300005441\|Ga0070700_100940288	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	707	Open in IMG/M
3300005444\|Ga0070694_101595522	Not Available	554	Open in IMG/M
3300005445\|Ga0070708_101122826	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300005455\|Ga0070663_101055611	Not Available	708	Open in IMG/M
3300005456\|Ga0070678_100953689	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	786	Open in IMG/M
3300005457\|Ga0070662_101349449	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300005459\|Ga0068867_101004845	Not Available	756	Open in IMG/M
3300005459\|Ga0068867_101849505	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300005466\|Ga0070685_10083945	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1914	Open in IMG/M
3300005466\|Ga0070685_11246379	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300005546\|Ga0070696_100125974	All Organisms → cellular organisms → Bacteria → Proteobacteria	1858	Open in IMG/M
3300005548\|Ga0070665_100055703	All Organisms → cellular organisms → Bacteria	3965	Open in IMG/M
3300005564\|Ga0070664_100356490	All Organisms → cellular organisms → Bacteria	1331	Open in IMG/M
3300005578\|Ga0068854_100378453	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300005615\|Ga0070702_101863565	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300005719\|Ga0068861_102627664	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300005834\|Ga0068851_10007869	All Organisms → cellular organisms → Bacteria	4907	Open in IMG/M
3300005840\|Ga0068870_10966351	Not Available	605	Open in IMG/M
3300005884\|Ga0075291_1063373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella → Legionella cherrii	512	Open in IMG/M
3300006237\|Ga0097621_100787110	Not Available	880	Open in IMG/M
3300006844\|Ga0075428_101823803	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300006871\|Ga0075434_100600241	All Organisms → cellular organisms → Bacteria → Proteobacteria	1120	Open in IMG/M
3300006904\|Ga0075424_100687063	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300006931\|Ga0097620_100457244	All Organisms → cellular organisms → Bacteria	1373	Open in IMG/M
3300009036\|Ga0105244_10511475	Not Available	553	Open in IMG/M
3300009094\|Ga0111539_10006165	All Organisms → cellular organisms → Bacteria	15474	Open in IMG/M
3300009094\|Ga0111539_10180563	All Organisms → cellular organisms → Bacteria	2465	Open in IMG/M
3300009098\|Ga0105245_10030455	All Organisms → cellular organisms → Bacteria	4771	Open in IMG/M
3300009098\|Ga0105245_10091524	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2799	Open in IMG/M
3300009146\|Ga0105091_10168241	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300009156\|Ga0111538_10035287	All Organisms → cellular organisms → Bacteria	6471	Open in IMG/M
3300009156\|Ga0111538_12468449	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	652	Open in IMG/M
3300009157\|Ga0105092_10681126	Not Available	597	Open in IMG/M
3300009177\|Ga0105248_10034294	All Organisms → cellular organisms → Bacteria	5673	Open in IMG/M
3300009545\|Ga0105237_10792300	Not Available	954	Open in IMG/M
3300009551\|Ga0105238_10045713	All Organisms → cellular organisms → Bacteria	4423	Open in IMG/M
3300010373\|Ga0134128_11109961	Not Available	873	Open in IMG/M
3300010375\|Ga0105239_10055732	All Organisms → cellular organisms → Bacteria	4335	Open in IMG/M
3300010399\|Ga0134127_10254112	Not Available	1667	Open in IMG/M
3300010400\|Ga0134122_10287945	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1404	Open in IMG/M
3300010403\|Ga0134123_10102438	All Organisms → cellular organisms → Bacteria → Proteobacteria	2282	Open in IMG/M
3300011119\|Ga0105246_10389597	Not Available	1154	Open in IMG/M
3300011119\|Ga0105246_12102399	Not Available	547	Open in IMG/M
3300012480\|Ga0157346_1034855	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300012895\|Ga0157309_10042748	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300012900\|Ga0157292_10031858	Not Available	1331	Open in IMG/M
3300012901\|Ga0157288_10399362	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300012903\|Ga0157289_10144908	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300012905\|Ga0157296_10008117	All Organisms → cellular organisms → Bacteria	1707	Open in IMG/M
3300012905\|Ga0157296_10033212	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1112	Open in IMG/M
3300012908\|Ga0157286_10010293	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1812	Open in IMG/M
3300012911\|Ga0157301_10022361	All Organisms → cellular organisms → Bacteria	1411	Open in IMG/M
3300012911\|Ga0157301_10032779	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300012951\|Ga0164300_11121258	Not Available	516	Open in IMG/M
3300012960\|Ga0164301_11166439	Not Available	617	Open in IMG/M
3300012961\|Ga0164302_10729394	Not Available	738	Open in IMG/M
3300012984\|Ga0164309_10040833	All Organisms → cellular organisms → Bacteria	2624	Open in IMG/M
3300012988\|Ga0164306_10295893	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300013102\|Ga0157371_10490854	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300013105\|Ga0157369_10159110	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2385	Open in IMG/M
3300013105\|Ga0157369_11143442	Not Available	795	Open in IMG/M
3300013306\|Ga0163162_11137970	Not Available	885	Open in IMG/M
3300013306\|Ga0163162_11270420	Not Available	836	Open in IMG/M
3300014325\|Ga0163163_10160433	All Organisms → cellular organisms → Bacteria	2294	Open in IMG/M
3300014326\|Ga0157380_11423853	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300014745\|Ga0157377_11309622	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300014968\|Ga0157379_10201866	All Organisms → cellular organisms → Bacteria	1798	Open in IMG/M
3300014969\|Ga0157376_11803013	Not Available	648	Open in IMG/M
3300015201\|Ga0173478_10036927	All Organisms → cellular organisms → Bacteria	1521	Open in IMG/M
3300015371\|Ga0132258_10005587	All Organisms → cellular organisms → Bacteria	24706	Open in IMG/M
3300015371\|Ga0132258_13150929	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300015372\|Ga0132256_100069565	All Organisms → cellular organisms → Bacteria	3331	Open in IMG/M
3300019356\|Ga0173481_10004567	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3644	Open in IMG/M
3300019356\|Ga0173481_10236174	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300019356\|Ga0173481_10454831	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300019361\|Ga0173482_10010267	All Organisms → cellular organisms → Bacteria	2392	Open in IMG/M
3300022880\|Ga0247792_1057104	Not Available	740	Open in IMG/M
3300022886\|Ga0247746_1128921	Not Available	635	Open in IMG/M
3300022901\|Ga0247788_1074775	Not Available	650	Open in IMG/M
3300022910\|Ga0247768_1124521	Not Available	788	Open in IMG/M
3300023097\|Ga0247757_10051566	Not Available	1271	Open in IMG/M
3300023102\|Ga0247754_1144036	Not Available	590	Open in IMG/M
3300023102\|Ga0247754_1189734	Not Available	518	Open in IMG/M
3300023275\|Ga0247776_10214528	Not Available	724	Open in IMG/M
3300024055\|Ga0247794_10196845	Not Available	648	Open in IMG/M
3300025911\|Ga0207654_10339891	Not Available	1031	Open in IMG/M
3300025912\|Ga0207707_10261347	All Organisms → cellular organisms → Bacteria	1502	Open in IMG/M
3300025917\|Ga0207660_10093624	All Organisms → cellular organisms → Bacteria	2232	Open in IMG/M
3300025920\|Ga0207649_10008945	All Organisms → cellular organisms → Bacteria	5471	Open in IMG/M
3300025921\|Ga0207652_10293466	All Organisms → cellular organisms → Bacteria	1467	Open in IMG/M
3300025925\|Ga0207650_10207455	All Organisms → cellular organisms → Bacteria	1572	Open in IMG/M
3300025930\|Ga0207701_11196713	Not Available	626	Open in IMG/M
3300025933\|Ga0207706_10627355	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	922	Open in IMG/M
3300025934\|Ga0207686_10777035	Not Available	766	Open in IMG/M
3300025935\|Ga0207709_10011526	All Organisms → cellular organisms → Bacteria	4878	Open in IMG/M
3300025944\|Ga0207661_10547059	Not Available	1060	Open in IMG/M
3300026075\|Ga0207708_11343615	Not Available	627	Open in IMG/M
3300026089\|Ga0207648_10613864	All Organisms → cellular organisms → Bacteria	1003	Open in IMG/M
3300026118\|Ga0207675_101297453	Not Available	748	Open in IMG/M
3300026118\|Ga0207675_101838435	Not Available	625	Open in IMG/M
3300026121\|Ga0207683_11036179	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	761	Open in IMG/M
3300026995\|Ga0208761_1037507	Not Available	503	Open in IMG/M
3300027614\|Ga0209970_1111628	Not Available	526	Open in IMG/M
3300028379\|Ga0268266_12184652	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300028381\|Ga0268264_10353562	All Organisms → cellular organisms → Bacteria	1399	Open in IMG/M
3300028587\|Ga0247828_10359657	Not Available	824	Open in IMG/M
3300028589\|Ga0247818_10413206	Not Available	910	Open in IMG/M
3300028590\|Ga0247823_11005387	Not Available	625	Open in IMG/M
3300028592\|Ga0247822_10286531	Not Available	1255	Open in IMG/M
3300028596\|Ga0247821_10185556	Not Available	1222	Open in IMG/M
3300028803\|Ga0307281_10254630	Not Available	645	Open in IMG/M
3300028809\|Ga0247824_10591444	Not Available	665	Open in IMG/M
3300030336\|Ga0247826_10099029	All Organisms → cellular organisms → Bacteria	1807	Open in IMG/M
3300030336\|Ga0247826_10169071	All Organisms → cellular organisms → Bacteria	1462	Open in IMG/M
3300031547\|Ga0310887_10765996	Not Available	604	Open in IMG/M
3300031548\|Ga0307408_101025321	Not Available	762	Open in IMG/M
3300031847\|Ga0310907_10301232	Not Available	807	Open in IMG/M
3300031938\|Ga0308175_100974687	Not Available	936	Open in IMG/M
3300031996\|Ga0308176_11896095	Not Available	636	Open in IMG/M
3300034669\|Ga0314794_162731	Not Available	524	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	51.68%
Host-Associated	Host-Associated	48.32%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	48.32%
Plants	Host-Associated → Plants	48.32%
Aquatic	Environmental → Aquatic	3.36%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	30.20%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.78%
Marine	Environmental → Aquatic → Marine	2.01%
Plant Litter	Environmental → Terrestrial → Plant Litter	2.01%
Freshwater	Environmental → Aquatic → Freshwater	1.34%
Roots	Host-Associated → Plants → Roots	1.34%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.12%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	14.09%
Loam	Environmental → Terrestrial → Soil → Loam	13.42%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.08%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.01%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	2.01%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.34%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.34%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.34%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.34%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.12%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	14.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.08%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.70%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	2.01%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.34%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.34%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.34%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.34%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.34%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.34%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.04%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.37%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.37%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.03%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.36%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.68%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.01%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	2.01%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.01%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.01%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.34%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.34%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.34%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.34%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.34%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.67%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.67%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated	Open in IMG/M
3300002077	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3	Host-Associated	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005884	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2)	Host-Associated	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012480	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.yng.040610	Host-Associated	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300022880	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S106-311C-6	Environmental	Open in IMG/M
3300022886	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5	Environmental	Open in IMG/M
3300022901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4	Environmental	Open in IMG/M
3300022910	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L016-104C-6	Environmental	Open in IMG/M
3300023097	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L126-311R-4	Environmental	Open in IMG/M
3300023102	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5	Environmental	Open in IMG/M
3300023275	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L199-509C-5	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026995	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB (SPAdes)	Environmental	Open in IMG/M
3300027614	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028590	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300034669	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_09552242	2228664021	Soil	VLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVATNVPRLHAFAVERAGGEDAARMPMPEGGSDAAAFMPMPEGGPAAGAQS
JGIcombinedJ13530_1026737641	3300001213	Wetland	VTEETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVSANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
JGI24743J22301_100060152	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	VTGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVSANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAA
JGI24744J21845_100273332	3300002077	Corn, Switchgrass And Miscanthus Rhizosphere	VTGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVSANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEG
Ga0055467_100746571	3300003996	Natural And Restored Wetlands	THYFIPKTDLSGYAVTNVPEPLTAGADVSANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0055465_103421621	3300004013	Natural And Restored Wetlands	VTGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0062589_1019355992	3300004156	Soil	VTGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVATNVPRLHAFAVERAGGEDAARMPMPEGGSDAAAFMPMPEGGPAAGAQS*
Ga0066815_100236751	3300005164	Soil	RSTVTGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0070658_100211492	3300005327	Corn Rhizosphere	VTGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVSANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0070676_101308512	3300005328	Miscanthus Rhizosphere	VTGKTTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLGAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQS*
Ga0070683_1001639672	3300005329	Corn Rhizosphere	VTGKTTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQS*
Ga0070670_1003687042	3300005331	Switchgrass Rhizosphere	VTGKTTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVSANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0070677_101476402	3300005333	Miscanthus Rhizosphere	VTGETTPGVLLHGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVERAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0068869_1002348401	3300005334	Miscanthus Rhizosphere	TTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLGAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQS*
Ga0068869_1020112481	3300005334	Miscanthus Rhizosphere	DGTHYFIPKTDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0070682_1000166242	3300005337	Corn Rhizosphere	VLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVSANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0070682_1007234811	3300005337	Corn Rhizosphere	AVTGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0070682_1014835171	3300005337	Corn Rhizosphere	ETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLGAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQS*
Ga0068868_1002043311	3300005338	Miscanthus Rhizosphere	GETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVSANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0068868_1017809401	3300005338	Miscanthus Rhizosphere	VTGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPESLTAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0070689_1000777251	3300005340	Switchgrass Rhizosphere	VTGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0070691_104531391	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	KTDLSGYAVTNVPEPLTAGADVATNVPRLHAFAVERAGGEDAARMPMPEGGSDAAAFMPMPEGGPAAGAQS*
Ga0070692_102289251	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	VLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0070668_1005134972	3300005347	Switchgrass Rhizosphere	VTGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVERAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQS*
Ga0070675_1009882441	3300005354	Miscanthus Rhizosphere	VTGETTPGVLLHGEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVERAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQP*
Ga0070673_1018668132	3300005364	Switchgrass Rhizosphere	TTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0070659_1013559752	3300005366	Corn Rhizosphere	DAPTTGRAAHESARRSTVTGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVATNVPRLHAFAVERAGGEDAARMPMPEGGSDAAAFMPMPEGGPAAGAQS*
Ga0070667_1006309521	3300005367	Switchgrass Rhizosphere	GEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQS*
Ga0070700_1002908752	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VTGETTPGVLLHGEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFTPMPEGGPATSAQS*
Ga0070700_1009402882	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	YFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVERAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQS*
Ga0070694_1015955222	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VTGETTPGVLLHGEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVERAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQS*
Ga0070708_1011228262	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VTEETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0070663_1010556111	3300005455	Corn Rhizosphere	VTGKTTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVERAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQS*
Ga0070678_1009536891	3300005456	Miscanthus Rhizosphere	TGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0070662_1013494491	3300005457	Corn Rhizosphere	GAREGDRARDAPTTGRAAHESARRSTVTGETTPGVLLRGEDGTHYFIPKSDLSGYAVTNVPEPLTAGADVATNVPRLHAFAVERAGGEDAARMPMPEGGSDAAAFMPMPEGGPAAGAQS*
Ga0068867_1010048451	3300005459	Miscanthus Rhizosphere	VTEETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVERAGGEDAARMPMPEAGSDAAAFTPMPEGGPAVSAQS*
Ga0068867_1018495051	3300005459	Miscanthus Rhizosphere	ETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVSANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0070685_100839453	3300005466	Switchgrass Rhizosphere	FIPKTDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0070685_112463791	3300005466	Switchgrass Rhizosphere	PGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVSANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0070696_1001259742	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VTGETTPGVLLHGEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0070665_1000557031	3300005548	Switchgrass Rhizosphere	VTGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVERAGGEDAARMPMPEAGSDAAAFTPMPEGGPAVSAQS*
Ga0070664_1003564901	3300005564	Corn Rhizosphere	PKTDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0068854_1003784532	3300005578	Corn Rhizosphere	VTGETTPGVLLRGEDGTHYFIPKSDLSGYAVTNVPEPLTAGADVATNVPRLHAFAVERAGGEDAARMPMPEGGSDAAAFMPMPEGGPAAGAQS*
Ga0070702_1018635652	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	LRGEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVERAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQS*
Ga0068861_1026276642	3300005719	Switchgrass Rhizosphere	GTHYFIPKTDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0068851_100078696	3300005834	Corn Rhizosphere	EVTGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVSANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0068870_109663511	3300005840	Miscanthus Rhizosphere	RGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0075291_10633731	3300005884	Rice Paddy Soil	VTEETTPGVLLRGEDGTHYFIPKTDLSGYAVTYVPEPLTAGADVSANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0097621_1007871101	3300006237	Miscanthus Rhizosphere	YFIPKTDLSGYAVTNVPEPLTAGADVSANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0075428_1018238032	3300006844	Populus Rhizosphere	VTGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVERAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQP*
Ga0075434_1006002412	3300006871	Populus Rhizosphere	VTGETTPGVLLHGEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQS*
Ga0075424_1006870632	3300006904	Populus Rhizosphere	ETTPGVLLHGEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVERAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0097620_1004572441	3300006931	Switchgrass Rhizosphere	GEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVERAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQS*
Ga0105244_105114752	3300009036	Miscanthus Rhizosphere	VLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVATNVPRLHAFAVERAGGEDAARMPMPEGGSDAAAFMPMPEGGPAAGAQ
Ga0111539_1000616515	3300009094	Populus Rhizosphere	VLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVATNVPRLHAFAVERAGGEDAARMPMPEGGSDAAAFMPMPEGGPAAGAQS*
Ga0111539_101805632	3300009094	Populus Rhizosphere	VLLHGEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVERAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQS*
Ga0105245_100304552	3300009098	Miscanthus Rhizosphere	VLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVSANVPRLHAFAVDRAGGEDAARMPMPEAGSDAATFMPMPEGGPAGSAQS*
Ga0105245_100915241	3300009098	Miscanthus Rhizosphere	GTRRCSVTGKTTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVATNVPRLHAFAVERAGGEDAARMPMPEGGSDAAAFMPMPEGGPAAGAQS*
Ga0105091_101682412	3300009146	Freshwater Sediment	VLLKGEDGTHYFIPKTDLSQYSVGDVPERLAAGADVAANVPRLHAFSVQRVEGGSDAARTPMPEGASEAAAFVPMPEARPSGAEQS*
Ga0111538_100352871	3300009156	Populus Rhizosphere	GEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVERAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQP*
Ga0111538_124684491	3300009156	Populus Rhizosphere	EDGTHYFIPKTDLSGYAVTNVPEPLSAGAGVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQS*
Ga0105092_106811261	3300009157	Freshwater Sediment	VLLKGEDGTHYFIPKTDLSQYSVGDVPERLAAGADVAANVPRLHAFSVQRVEGGSDAARTPMPEGASEAAAFVPMPEARPSG
Ga0105248_100342941	3300009177	Switchgrass Rhizosphere	TPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVSANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0105237_107923001	3300009545	Corn Rhizosphere	VTGETTPGVLLRGEDGTHYFIPKSDLSGYAVTNVPEPLTAGADVATNVPRLHAFAVERAGGEDAARMPMPEGGSDAAAFMPMPEGGPA
Ga0105238_100457133	3300009551	Corn Rhizosphere	VLLHGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0134128_111099611	3300010373	Terrestrial Soil	VLLRGEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVERAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0105239_100557322	3300010375	Corn Rhizosphere	VLLRGEDGTHYFIPKSDLSGYAVTNVPEPLTAGADVATNVPRLHAFAVERAGGEDAARMPMPEGGSDAAAFMPMPEGGPAAGAQS*
Ga0134127_102541122	3300010399	Terrestrial Soil	VLLHGEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVERAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQP*
Ga0134122_102879452	3300010400	Terrestrial Soil	VLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVSANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAAGAQS*
Ga0134123_101024382	3300010403	Terrestrial Soil	VLLHGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVERAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQP*
Ga0105246_103895971	3300011119	Miscanthus Rhizosphere	VLLHGEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVERAGGEDAARMPMPEAGSDAAAFTPM
Ga0105246_121023992	3300011119	Miscanthus Rhizosphere	YFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQS*
Ga0157346_10348551	3300012480	Arabidopsis Rhizosphere	IPKTDLSGYAVTNVPEPLTAGANVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0157309_100427482	3300012895	Soil	SVTGKTTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVSANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0157292_100318581	3300012900	Soil	VTGKTTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVSANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGS
Ga0157288_103993621	3300012901	Soil	RSTVTGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVATNVPRLHAFAVERAGGEDAARMPMPEGGSDAAAFMPMPEGGPAAGAQS*
Ga0157289_101449082	3300012903	Soil	VLLRGEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGGAQS*
Ga0157296_100081172	3300012905	Soil	VTGETTPGVLLRGEDGTHYFIPKTDLSGFAVTNVPEPLTAGADVATNVPRLHAFAVERAGGEDAARMPMPEGGSDAAAFMPMPEGGPAAGAQS*
Ga0157296_100332122	3300012905	Soil	VLVRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVSANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0157286_100102931	3300012908	Soil	GTHYFIPKTDLSGYAVTNVPEPLTAGADVATNVPRLHAFAVERAGGEDAARMPMPEGGSDAAAFMPMPEGGPAAGAQS*
Ga0157301_100223611	3300012911	Soil	TDLSGYAVTNVPEPLTAGADVATNVPRLHAFAVERAGGEDAARMPMPEGGSDAAAFMPMPEGGPAAGAQS*
Ga0157301_100327791	3300012911	Soil	KTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQS*
Ga0164300_111212581	3300012951	Soil	GEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0164301_111664391	3300012960	Soil	VLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAPS*
Ga0164302_107293942	3300012961	Soil	VLLRGEDGTHYFIPKSDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0164309_100408332	3300012984	Soil	VLLHGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVSANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0164306_102958932	3300012988	Soil	EDGTHYFIPKSDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0157371_104908541	3300013102	Corn Rhizosphere	VLLRGEDGTHYFIPKTDLSGDAVTNVHKPLTAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0157369_101591101	3300013105	Corn Rhizosphere	LLHGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0157369_111434421	3300013105	Corn Rhizosphere	VLLQGEAGRRYFTPKTDLSGYAVTNVPEPLTAGADVSANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0163162_111379702	3300013306	Switchgrass Rhizosphere	VLPRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0163162_112704202	3300013306	Switchgrass Rhizosphere	VTEETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVERAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQS*
Ga0163163_101604332	3300014325	Switchgrass Rhizosphere	VLLRGEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVERAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQP*
Ga0157380_114238532	3300014326	Switchgrass Rhizosphere	VLLHGEDGTHYFIPKTDLSGYAVTNVPEPLSGGADVAANVPRLHAFAVERAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQS*
Ga0157377_113096221	3300014745	Miscanthus Rhizosphere	PGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0157379_102018662	3300014968	Switchgrass Rhizosphere	VLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQS*
Ga0157376_118030131	3300014969	Miscanthus Rhizosphere	VLLHGEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVERAGGEDAARMPMPEAGSDAAAFTPMPEGGPATSAQS*
Ga0173478_100369272	3300015201	Soil	VTEKTTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVERAGGEDAARMPMPEGGSDAAAFMPMPEGGPAGSAPS*
Ga0132258_100055877	3300015371	Arabidopsis Rhizosphere	VLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGANVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS*
Ga0132258_131509292	3300015371	Arabidopsis Rhizosphere	VTEETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQS*
Ga0132256_1000695651	3300015372	Arabidopsis Rhizosphere	HESARRSTVTGETTPGVLLRGEDGTHYFIPKSDLSGYAVTNVPEPLTAGADVATNVPRLHAFAVERAGGEDAARMPMPEGGSDAAAFMPMPEGGPAAGAQS*
Ga0173481_100045672	3300019356	Soil	VTGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVATNVPRLHAFAVERAGGEDAARMPMPEGGSDAAAFMPMPEGGPAAGAQS
Ga0173481_102361741	3300019356	Soil	RGEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQS
Ga0173481_104548311	3300019356	Soil	VTGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS
Ga0173482_100102672	3300019361	Soil	VTGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVSANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS
Ga0247792_10571041	3300022880	Soil	VTGKTTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVSANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS
Ga0247746_11289211	3300022886	Soil	VTGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLGAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQS
Ga0247788_10747751	3300022901	Soil	LRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVATNVPRLHAFAVERAGGEDAARMPMPEGGSDAAAFMPMPEGGPAAGAQS
Ga0247768_11245212	3300022910	Plant Litter	VTGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVSANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGG
Ga0247757_100515661	3300023097	Plant Litter	VTGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVSANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQ
Ga0247754_11440362	3300023102	Soil	VTGKTTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLGAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQS
Ga0247754_11897342	3300023102	Soil	VTGETTPGVLLRGEDGTHYFIPKSDLSGYAVTNVPEPLTAGADVATNVPRLHAFAVERAGGEDAARMPMPEGGSDAAAFMPMPEGGPAAGAQS
Ga0247776_102145281	3300023275	Plant Litter	VTGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVSANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGS
Ga0247794_101968451	3300024055	Soil	RGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVATNVPRLHAFAVERAGGEDAARMPMPEGGSDAAAFMPMPEGGPAAGAQS
Ga0207654_103398911	3300025911	Corn Rhizosphere	VTGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQS
Ga0207707_102613472	3300025912	Corn Rhizosphere	VTGETTPGVLLHGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVSANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS
Ga0207660_100936242	3300025917	Corn Rhizosphere	VTGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMP
Ga0207649_100089451	3300025920	Corn Rhizosphere	GKTTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLGAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQS
Ga0207652_102934662	3300025921	Corn Rhizosphere	VTGETTPGVLLHGEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVERAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQS
Ga0207650_102074552	3300025925	Switchgrass Rhizosphere	VTGKTTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQS
Ga0207701_111967131	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VTGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQP
Ga0207706_106273552	3300025933	Corn Rhizosphere	GVLLRGEDGTHYFIPKSDLSGYAVTNVPEPLTAGADVATNVPRLHAFAVERAGGEDAARMPMPEGGSDAAAFMPMPEGGPAAGAQS
Ga0207686_107770351	3300025934	Miscanthus Rhizosphere	VTGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVSANVPRLHAFAVDRAGGEDAARMPMPEAGSDAATFMPMPEG
Ga0207709_100115261	3300025935	Miscanthus Rhizosphere	EDGTHYFIPKTDLSGYAVTNVPEPLTAGADVSANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS
Ga0207661_105470592	3300025944	Corn Rhizosphere	VTGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVATNVPRLHAFAVERAGGEDAARMPMPEGGSDAAAF
Ga0207708_113436151	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	ETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVERAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQS
Ga0207648_106138642	3300026089	Miscanthus Rhizosphere	RGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS
Ga0207675_1012974531	3300026118	Switchgrass Rhizosphere	ETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVSANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS
Ga0207675_1018384351	3300026118	Switchgrass Rhizosphere	SARRSTVTGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVATNVPRLHAFAVERAGGEDAARMPMPEGGSDAAAFMPMPEGGPAAGAQS
Ga0207683_110361791	3300026121	Miscanthus Rhizosphere	EDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS
Ga0208761_10375071	3300026995	Soil	VTGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSTQS
Ga0209970_11116282	3300027614	Arabidopsis Thaliana Rhizosphere	SVTGKTTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLGAGADVAANVPRLHAFAVDRAGGEDAARMPMPESGSDAAAFMPMPEGGPAGSAQS
Ga0268266_121846522	3300028379	Switchgrass Rhizosphere	VTGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVERAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS
Ga0268264_103535621	3300028381	Switchgrass Rhizosphere	LLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS
Ga0247828_103596572	3300028587	Soil	VTGETTPGVLLHGEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVERAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQP
Ga0247818_104132062	3300028589	Soil	VTGETTPGVLLHGEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVERAGGEDAARMPMPEAGSDAAAFTPMPEGG
Ga0247823_110053872	3300028590	Soil	VTGETTPGVLLHGEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVERAGGEDAARMPMPEAGSDAAAFTTMPEGGPAASAQS
Ga0247822_102865311	3300028592	Soil	VTGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGAGLR
Ga0247821_101855562	3300028596	Soil	VTGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPE
Ga0307281_102546301	3300028803	Soil	LSEEPTPGVLLKGEDGTHYFIPKTDLSGYAVSDVPAPLQAGADVAENVPRLHAFSVQRVAGGSEAAHTPMPEGGSDAAQ
Ga0247824_105914441	3300028809	Soil	VTGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAG
Ga0247826_100990291	3300030336	Soil	VTGETTPGVLLHGEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVERAGGEDAARMPMPEAGSDAAAFTPMPEG
Ga0247826_101690712	3300030336	Soil	VTGETTPGVLLRGEDGTHYFIPKSDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS
Ga0310887_107659962	3300031547	Soil	VTGETTPGVLLHGEDGTHYFIPKTDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVERAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS
Ga0307408_1010253211	3300031548	Rhizosphere	VTGETTPGVLLRGEDGTHYFIPKTDLSGYAVTNVPEPLAAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSTQS
Ga0310907_103012322	3300031847	Soil	VTGETTPGVLLRGEDGTHYFIPKSDLSGYAVTNVPEPLSAGADVAANVPRLHAFAVERAGGEDAARMPMPEAGSDAAAFTPMPEGGPAASAQP
Ga0308175_1009746872	3300031938	Soil	VTGETTPGVLLRGEDGTHYFIPKSDLSGYAVTNVPEPLTAGADVADNVPRLHAFAVDRAGGEDAARMPMPEAGSDAA
Ga0308176_118960952	3300031996	Soil	VTGETTPGVLLRGEDGTHYFIPKSDLSGYAVTNVPEPLTAGADVADNVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS
Ga0314794_162731_100_357	3300034669	Soil	VLLRGEDGTHYFIPKTDLSGYAVTNVPEPLTAGADVAANVPRLHAFAVDRAGGEDAARMPMPEAGSDAAAFMPMPEGGPAGSAQS

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F047742

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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