Metagenome / Metatranscriptome Family F047754

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F047754
Family Type	Metagenome / Metatranscriptome
Number of Sequences	149
Average Sequence Length	100 residues
Representative Sequence	MKKIFCLLVAISFIFVFTSCSLIGIGSPTTTTGTVPSNYPDSVVYKIELSNETYLCSSFNVSNTDAEISLRLNDAYSLSSDGKITWIGKEKEISVVKIEKISK
Number of Associated Samples	75
Number of Associated Scaffolds	149

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	77.18 %
% of genes near scaffold ends (potentially truncated)	32.21 %
% of genes from short scaffolds (< 2000 bps)	89.26 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (64.430 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (23.490 % of family members)
Environment Ontology (ENVO)	Unclassified (23.490 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (36.242 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 12.98% β-sheet: 30.53% Coil/Unstructured: 56.49%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 149 Family Scaffolds
PF05532	CsbD	10.07
PF11295	DUF3096	10.07
PF07311	Dodecin	5.37
PF07411	DUF1508	4.03
PF05239	PRC	2.68
PF12732	YtxH	2.01
PF11154	DUF2934	2.01
PF01380	SIS	2.01
PF00196	GerE	1.34
PF00149	Metallophos	1.34
PF12728	HTH_17	1.34
PF06348	DUF1059	1.34
PF02518	HATPase_c	1.34
PF00072	Response_reg	0.67
PF14321	DUF4382	0.67
PF00497	SBP_bac_3	0.67
PF04055	Radical_SAM	0.67
PF04542	Sigma70_r2	0.67
PF04972	BON	0.67
PF01694	Rhomboid	0.67
PF12706	Lactamase_B_2	0.67
PF01594	AI-2E_transport	0.67
PF03631	Virul_fac_BrkB	0.67
PF07819	PGAP1	0.67
PF00724	Oxidored_FMN	0.67
PF13282	DUF4070	0.67
PF04020	Phage_holin_4_2	0.67
PF00561	Abhydrolase_1	0.67

COG ID	Name	Functional Category	% Frequency in 149 Family Scaffolds
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	10.07
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	5.37
COG3422	Uncharacterized conserved protein YegP, UPF0339 family	Function unknown [S]	4.03
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.67
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.67
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	0.67
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.67
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	0.67
COG1075	Triacylglycerol esterase/lipase EstA, alpha/beta hydrolase fold	Lipid transport and metabolism [I]	0.67
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.67
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.67
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.67
COG1902	2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family	Energy production and conversion [C]	0.67
COG1950	Uncharacterized membrane protein YvlD, DUF360 family	Function unknown [S]	0.67
COG2267	Lysophospholipase, alpha-beta hydrolase superfamily	Lipid transport and metabolism [I]	0.67
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.43 %
All Organisms	root	All Organisms	35.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.43 %
cellular organisms	root	All Organisms → cellular organisms	35.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.43 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	34.90 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.43 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	16.11 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.34 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.67 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.43 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	16.11 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.67 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.67 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.43 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	5.37 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	4.70 %
Acidobacteria bacterium 13_1_40CM_2_68_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_68_5	0.67 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.67 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.43 %
Dehalogenimonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalogenimonas	2.68 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	2.01 %
Chloroflexi bacterium CG07_land_8_20_14_0_80_51_10	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium CG07_land_8_20_14_0_80_51_10	2.01 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.34 %
Chloroflexi bacterium RBG_13_46_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_46_9	0.67 %
Chloroflexi bacterium RBG_16_56_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_56_11	0.67 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.67 %
Acidobacteria bacterium 13_1_40CM_2_68_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_68_5	0.67 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.43 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	2.01 %
Chloroflexi bacterium CG07_land_8_20_14_0_80_51_10	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium CG07_land_8_20_14_0_80_51_10	2.01 %
Dehalogenimonas alkenigignens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalogenimonas → Dehalogenimonas alkenigignens	1.34 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.34 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.67 %
Chloroflexi bacterium RBG_13_46_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_46_9	0.67 %
Chloroflexi bacterium RBG_16_56_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_56_11	0.67 %
Acidobacteria bacterium 13_1_40CM_2_68_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_68_5	0.67 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.43 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	2.01 %
Chloroflexi bacterium CG07_land_8_20_14_0_80_51_10	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium CG07_land_8_20_14_0_80_51_10	2.01 %
Dehalogenimonas alkenigignens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalogenimonas → Dehalogenimonas alkenigignens	1.34 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.34 %
unclassified Desulfobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae	0.67 %
Chloroflexi bacterium RBG_13_46_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_46_9	0.67 %
Chloroflexi bacterium RBG_16_56_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_56_11	0.67 %
Acidobacteria bacterium 13_1_40CM_2_68_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_68_5	0.67 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.43 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	2.01 %
Chloroflexi bacterium CG07_land_8_20_14_0_80_51_10	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium CG07_land_8_20_14_0_80_51_10	2.01 %
Dehalogenimonas alkenigignens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalogenimonas → Dehalogenimonas alkenigignens	1.34 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.34 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	0.67 %
Chloroflexi bacterium RBG_13_46_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_46_9	0.67 %
Chloroflexi bacterium RBG_16_56_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_56_11	0.67 %
Acidobacteria bacterium 13_1_40CM_2_68_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_68_5	0.67 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000032\|Draft_c0123286	All Organisms → cellular organisms → Bacteria	1300	Open in IMG/M
3300000894\|WSSedL1B2DRAFT_1011505	Not Available	767	Open in IMG/M
3300001213\|JGIcombinedJ13530_104951479	Not Available	833	Open in IMG/M
3300001213\|JGIcombinedJ13530_105673137	Not Available	921	Open in IMG/M
3300001213\|JGIcombinedJ13530_105782072	Not Available	912	Open in IMG/M
3300001213\|JGIcombinedJ13530_106546128	Not Available	588	Open in IMG/M
3300001213\|JGIcombinedJ13530_107444387	All Organisms → cellular organisms → Bacteria	2299	Open in IMG/M
3300001213\|JGIcombinedJ13530_110085496	Not Available	552	Open in IMG/M
3300002821\|Iso3TCLC_10027731	All Organisms → cellular organisms → Bacteria	17268	Open in IMG/M
3300003432\|JGI20214J51088_10075010	All Organisms → cellular organisms → Bacteria	2369	Open in IMG/M
3300003432\|JGI20214J51088_10691751	Not Available	651	Open in IMG/M
3300003541\|JGI20214J51650_10262669	All Organisms → cellular organisms → Bacteria	1194	Open in IMG/M
3300004078\|Ga0055513_10160566	Not Available	557	Open in IMG/M
3300005219\|Ga0069004_10223861	Not Available	571	Open in IMG/M
3300006224\|Ga0079037_100016279	All Organisms → cellular organisms → Bacteria	5076	Open in IMG/M
3300006224\|Ga0079037_100640135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1034	Open in IMG/M
3300006224\|Ga0079037_100686774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_46_9	999	Open in IMG/M
3300006224\|Ga0079037_101473040	Not Available	679	Open in IMG/M
3300006224\|Ga0079037_101876457	Not Available	599	Open in IMG/M
3300006224\|Ga0079037_102033743	Not Available	574	Open in IMG/M
3300006224\|Ga0079037_102042775	Not Available	573	Open in IMG/M
3300006224\|Ga0079037_102127344	Not Available	561	Open in IMG/M
3300007351\|Ga0104751_1007665	All Organisms → cellular organisms → Bacteria	11520	Open in IMG/M
3300009009\|Ga0105105_10146682	Not Available	1185	Open in IMG/M
3300009037\|Ga0105093_10278517	Not Available	884	Open in IMG/M
3300009053\|Ga0105095_10140030	All Organisms → cellular organisms → Bacteria	1318	Open in IMG/M
3300009053\|Ga0105095_10221571	Not Available	1037	Open in IMG/M
3300009053\|Ga0105095_10616220	Not Available	604	Open in IMG/M
3300009078\|Ga0105106_10277967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalogenimonas → Dehalogenimonas alkenigignens	1214	Open in IMG/M
3300009078\|Ga0105106_10493274	Not Available	881	Open in IMG/M
3300009078\|Ga0105106_10786299	Not Available	678	Open in IMG/M
3300009081\|Ga0105098_10647014	Not Available	556	Open in IMG/M
3300009082\|Ga0105099_10017726	Not Available	3619	Open in IMG/M
3300009087\|Ga0105107_10577362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	783	Open in IMG/M
3300009087\|Ga0105107_10880657	Not Available	623	Open in IMG/M
3300009091\|Ga0102851_10092244	All Organisms → cellular organisms → Bacteria	2597	Open in IMG/M
3300009091\|Ga0102851_10675888	Not Available	1089	Open in IMG/M
3300009091\|Ga0102851_11042133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	892	Open in IMG/M
3300009091\|Ga0102851_11192332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalogenimonas → Dehalogenimonas alkenigignens	837	Open in IMG/M
3300009091\|Ga0102851_12436060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalogenimonas	598	Open in IMG/M
3300009111\|Ga0115026_11036538	Not Available	658	Open in IMG/M
3300009111\|Ga0115026_11292522	Not Available	598	Open in IMG/M
3300009131\|Ga0115027_11187052	Not Available	609	Open in IMG/M
3300009146\|Ga0105091_10034412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalogenimonas	2218	Open in IMG/M
3300009153\|Ga0105094_10172905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1234	Open in IMG/M
3300009153\|Ga0105094_10323349	All Organisms → cellular organisms → Bacteria → Proteobacteria	889	Open in IMG/M
3300009165\|Ga0105102_10570684	Not Available	622	Open in IMG/M
3300009166\|Ga0105100_10180457	All Organisms → cellular organisms → Bacteria	1256	Open in IMG/M
3300009166\|Ga0105100_10833452	Not Available	573	Open in IMG/M
3300009166\|Ga0105100_10927043	Not Available	544	Open in IMG/M
3300009167\|Ga0113563_10384692	Not Available	1491	Open in IMG/M
3300009167\|Ga0113563_10545831	All Organisms → cellular organisms → Archaea → Euryarchaeota	1273	Open in IMG/M
3300009167\|Ga0113563_10659855	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_68_5	1167	Open in IMG/M
3300009167\|Ga0113563_10707595	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300009167\|Ga0113563_11083776	Not Available	927	Open in IMG/M
3300009167\|Ga0113563_11557543	Not Available	780	Open in IMG/M
3300009171\|Ga0105101_10060782	All Organisms → cellular organisms → Bacteria	1836	Open in IMG/M
3300009179\|Ga0115028_10755091	Not Available	751	Open in IMG/M
3300009179\|Ga0115028_10779385	Not Available	741	Open in IMG/M
3300009179\|Ga0115028_11633045	Not Available	553	Open in IMG/M
3300009179\|Ga0115028_11659668	Not Available	550	Open in IMG/M
3300009179\|Ga0115028_11791930	Not Available	533	Open in IMG/M
3300012931\|Ga0153915_10040890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	4710	Open in IMG/M
3300012931\|Ga0153915_10902648	Not Available	1027	Open in IMG/M
3300012931\|Ga0153915_12863591	Not Available	563	Open in IMG/M
3300012964\|Ga0153916_10028138	All Organisms → cellular organisms → Bacteria	4854	Open in IMG/M
3300012964\|Ga0153916_10439428	Not Available	1369	Open in IMG/M
3300012964\|Ga0153916_10722352	Not Available	1075	Open in IMG/M
3300012964\|Ga0153916_11281063	Not Available	811	Open in IMG/M
3300012964\|Ga0153916_12189848	Not Available	621	Open in IMG/M
3300012964\|Ga0153916_12536282	Not Available	578	Open in IMG/M
3300012964\|Ga0153916_13177219	Not Available	517	Open in IMG/M
3300013078\|Ga0153914_1184847	Not Available	1552	Open in IMG/M
3300013080\|Ga0153913_1329475	Not Available	635	Open in IMG/M
3300014494\|Ga0182017_10396746	Not Available	854	Open in IMG/M
3300014496\|Ga0182011_10161381	All Organisms → cellular organisms → Bacteria	1542	Open in IMG/M
3300014498\|Ga0182019_11516597	Not Available	500	Open in IMG/M
3300014502\|Ga0182021_10514805	All Organisms → cellular organisms → Bacteria	1428	Open in IMG/M
3300014502\|Ga0182021_11502824	Not Available	811	Open in IMG/M
3300018015\|Ga0187866_1202320	Not Available	736	Open in IMG/M
3300018020\|Ga0187861_10041534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_56_11	2475	Open in IMG/M
3300022185\|Ga0079039_1124416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium CG07_land_8_20_14_0_80_51_10	1403	Open in IMG/M
3300022185\|Ga0079039_1218640	Not Available	505	Open in IMG/M
3300022185\|Ga0079039_1232474	Not Available	664	Open in IMG/M
3300022185\|Ga0079039_1377267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1037	Open in IMG/M
3300022185\|Ga0079039_1392806	Not Available	832	Open in IMG/M
3300022185\|Ga0079039_1505643	Not Available	832	Open in IMG/M
3300022185\|Ga0079039_1605699	Not Available	705	Open in IMG/M
3300022185\|Ga0079039_1617985	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300022550\|Ga0212127_10268428	Not Available	529	Open in IMG/M
3300023075\|Ga0224520_1146237	Not Available	516	Open in IMG/M
3300024056\|Ga0124853_1239634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1933	Open in IMG/M
3300025865\|Ga0209226_10440305	Not Available	519	Open in IMG/M
3300026026\|Ga0210129_1077147	Not Available	654	Open in IMG/M
3300027675\|Ga0209077_1031084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1446	Open in IMG/M
3300027740\|Ga0214474_1003306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	6976	Open in IMG/M
3300027740\|Ga0214474_1344654	Not Available	522	Open in IMG/M
3300027792\|Ga0209287_10058782	Not Available	1413	Open in IMG/M
3300027818\|Ga0209706_10587943	Not Available	501	Open in IMG/M
3300028920\|Ga0272441_10488251	Not Available	1002	Open in IMG/M
(restricted) 3300029268\|Ga0247842_10646679	Not Available	522	Open in IMG/M
3300029288\|Ga0265297_10926993	Not Available	523	Open in IMG/M
3300030943\|Ga0311366_10966059	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300031364\|Ga0307445_10242512	Not Available	623	Open in IMG/M
3300031577\|Ga0316602_10079851	Not Available	559	Open in IMG/M
3300031707\|Ga0315291_10260833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium CG07_land_8_20_14_0_80_51_10	1724	Open in IMG/M
3300031707\|Ga0315291_10961449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	723	Open in IMG/M
3300031726\|Ga0302321_101299735	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300031746\|Ga0315293_10697855	Not Available	756	Open in IMG/M
3300031772\|Ga0315288_10519813	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300032053\|Ga0315284_10233103	All Organisms → cellular organisms → Bacteria	2358	Open in IMG/M
3300032118\|Ga0315277_10631637	Not Available	1045	Open in IMG/M
3300032342\|Ga0315286_10320665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium CG07_land_8_20_14_0_80_51_10	1638	Open in IMG/M
3300032342\|Ga0315286_12228241	Not Available	503	Open in IMG/M
3300033408\|Ga0316605_10126973	Not Available	2029	Open in IMG/M
3300033413\|Ga0316603_10293088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1434	Open in IMG/M
3300033413\|Ga0316603_11254961	Not Available	702	Open in IMG/M
3300033414\|Ga0316619_10153098	All Organisms → cellular organisms → Bacteria	1589	Open in IMG/M
3300033414\|Ga0316619_10641295	Not Available	889	Open in IMG/M
3300033414\|Ga0316619_12227046	Not Available	502	Open in IMG/M
3300033418\|Ga0316625_100803914	Not Available	808	Open in IMG/M
3300033419\|Ga0316601_100067496	All Organisms → cellular organisms → Bacteria	2741	Open in IMG/M
3300033434\|Ga0316613_10276053	Not Available	1106	Open in IMG/M
3300033434\|Ga0316613_11124849	Not Available	541	Open in IMG/M
3300033480\|Ga0316620_10092811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	2256	Open in IMG/M
3300033480\|Ga0316620_10886437	Not Available	862	Open in IMG/M
3300033480\|Ga0316620_12213450	Not Available	547	Open in IMG/M
3300033480\|Ga0316620_12522266	Not Available	511	Open in IMG/M
3300033481\|Ga0316600_10159327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1442	Open in IMG/M
3300033483\|Ga0316629_10455081	Not Available	918	Open in IMG/M
3300033486\|Ga0316624_10492810	Not Available	1047	Open in IMG/M
3300033486\|Ga0316624_11784399	Not Available	569	Open in IMG/M
3300033486\|Ga0316624_12301406	Not Available	502	Open in IMG/M
3300033487\|Ga0316630_10580080	Not Available	933	Open in IMG/M
3300033487\|Ga0316630_10969448	Not Available	742	Open in IMG/M
3300033487\|Ga0316630_11024515	Not Available	723	Open in IMG/M
3300033487\|Ga0316630_11256571	Not Available	659	Open in IMG/M
3300033487\|Ga0316630_11687474	Not Available	576	Open in IMG/M
3300033489\|Ga0299912_10617968	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300033513\|Ga0316628_101153257	Not Available	1031	Open in IMG/M
3300033513\|Ga0316628_101432341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	920	Open in IMG/M
3300033513\|Ga0316628_101532748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	888	Open in IMG/M
3300033513\|Ga0316628_101632809	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300033513\|Ga0316628_103515817	Not Available	566	Open in IMG/M
3300033513\|Ga0316628_104106317	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	519	Open in IMG/M
3300033521\|Ga0316616_101288388	Not Available	935	Open in IMG/M
3300033557\|Ga0316617_100700276	Not Available	956	Open in IMG/M
3300033557\|Ga0316617_101196879	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300033557\|Ga0316617_101317569	Not Available	722	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.99%
Engineered	Engineered	2.01%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	65.77%
Terrestrial	Environmental → Terrestrial	32.21%
Lab Enrichment	Engineered → Lab Enrichment	1.34%
Solid Waste	Engineered → Solid Waste	0.67%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	55.03%
Soil	Environmental → Terrestrial → Soil	29.53%
Marine	Environmental → Aquatic → Marine	10.07%
Peat	Environmental → Terrestrial → Peat	2.01%
Defined Media	Engineered → Lab Enrichment → Defined Media	1.34%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.67%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.67%
Landfill	Engineered → Solid Waste → Landfill	0.67%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	28.19%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	26.85%
Sediment	Environmental → Aquatic → Freshwater → Sediment	20.81%
Wetlands	Environmental → Aquatic → Marine → Wetlands	9.40%
Lake	Environmental → Aquatic → Freshwater → Lake	6.04%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	2.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.01%
Anaerobic Media	Engineered → Lab Enrichment → Defined Media → Anaerobic Media	1.34%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.67%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.67%
Aquifer	Environmental → Terrestrial → Deep Subsurface → Aquifer	0.67%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	26.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	23.49%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	20.81%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	7.38%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	5.37%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.36%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.01%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.01%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.01%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.34%
Unclassified	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified	1.34%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.67%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.67%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.67%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.67%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Aquifer → Unclassified	0.67%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	23.49%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	20.13%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	15.44%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	6.71%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	6.71%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	5.37%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	5.37%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	3.36%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.01%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.34%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.34%
Hydrocarbon Resource Environments	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Hydrocarbon Resource Environments	1.34%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.67%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.67%
Marine Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Marine Sediment	0.67%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Hot Spring Sediment	0.67%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.67%
Deep Subsurface Aquifer	Environmental → Terrestrial → Deep Subsurface → Aquifer → Unclassified → Deep Subsurface Aquifer	0.67%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.67%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000032	Oil sands microbial community from Northern Alberta which degrade Naphthaline	Engineered	Open in IMG/M
3300000894	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site L1 Bulk	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300002821	Iso-alkanes.Hi.seq-Iso3T	Engineered	Open in IMG/M
3300003432	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003541	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300004078	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleB_D2	Environmental	Open in IMG/M
3300005219	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailB_D2	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300007351	Combined Assembly of Gp0115775, Gp0115815	Environmental	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009037	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300013078	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013080	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300018015	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300022185	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022550	Zodletone_combined assembly	Environmental	Open in IMG/M
3300023075	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T-25	Environmental	Open in IMG/M
3300024056	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300025865	Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212 (SPAdes)	Environmental	Open in IMG/M
3300026026	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300027675	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027740	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214 HiSeq	Environmental	Open in IMG/M
3300027792	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027818	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300028920	Marine sediment archaeal communities from Little Sippewissett salt marsh, Falmouth, MA, United States - SSM-Prop-6N	Environmental	Open in IMG/M
3300029268 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_19m	Environmental	Open in IMG/M
3300029288	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 137-91	Engineered	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031364	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - SW1603-30	Environmental	Open in IMG/M
3300031577	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033434	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033489	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Draft_01232861	3300000032	Hydrocarbon Resource Environments	MKRILCLIVAIACLFVLSSCSLIGIDNSTSTPATVAPNYPQSVVYKIELSQETYLCSSFNISDTDTEISLQLSEVYSVSSDGKITWMGQQKEISAVKIEKISK*
WSSedL1B2DRAFT_10115051	3300000894	Wetland	MKIIYCVLVVISLIFLCGACSLIGISNPATTGTVSSNYPDTVTYKIELSDETYLCSSFNVISTDALIALRLNDVYVLSSDGKITWIGKEKEISAVKIEKILK*
JGIcombinedJ13530_1049514793	3300001213	Wetland	MEKLFGLLVAISFIFVLASCSFLGSSTTPTGTASSGYPDSVVYTIKLSNETYLCSSYTVNSTDAEISLQLNAVYSMASDSKITWIGQEKVISAVTIEKISK*
JGIcombinedJ13530_1056731372	3300001213	Wetland	MKKIFCMLVAISFIFVLGSCSLLGSSTTPAGTASSGYPDSVAYKIKLSSETYLCSTYKVSNTDNGISILLSEVYSVSSDGKVTWVGQEKDVSAVSIEKISK*
JGIcombinedJ13530_1057820721	3300001213	Wetland	MKILLSLLAAVLLIVVLASCSLLGGSTTPVVTGSSGYPDSVVYKMKLSSETYLCSNFTVSKTDQEISLLLTDVYSMASDGKIIWIGKEKTISAVTIEKITK*
JGIcombinedJ13530_1065461282	3300001213	Wetland	MKKIICLLVAVSFIFVLASCSLIGGKTTTPAPASTGYPDSVVYKIKLSNETYLCSGFDVSNTDSEISLRLNDVYLMFSDGKITWLAKEKAISAAKIEKISK*
JGIcombinedJ13530_1074443874	3300001213	Wetland	MRKIICLLVSISFIFILGSCSLIGNGSTKTSEPVSSGYPNSVVYKIKLSNETYLCASFDISSTDAGISLLLKDVYSMVSDGKITWIGQEKTVPVVTIEKILK*
JGIcombinedJ13530_1100854961	3300001213	Wetland	IFLFGSCSLIGIGSPTTTSGTVTSNYPDSVVYKINLSNETYLCSSFNVSNTEAGISLRLNEVYSISSDGKITWIGKEKEIPAVKIEKISK*
Iso3TCLC_1002773117	3300002821	Hydrocarbon Resource Environments	MKRILCLIVAIACLFVLSSCSLIGIDNPTSTPATVAPNYPQSVVYKIELSQETYLCSSFNISNTDTEISLQLSEVYSVSSDGKITWMGQQKEISAVKIEKISK*
JGI20214J51088_100750103	3300003432	Wetland	MTKILILLVIISFIFVFGSCSLIGIGSSTTSSGTVSSNYPDSVVYKIKLSNETYLCSSFNVSNTDTDISLQLNEVYSIASDGKITWIGQTKAVSAVTIEKISK*
JGI20214J51088_106917512	3300003432	Wetland	MKIIYCVLVVISLIFLCGACSLIGISNPATTGTVSSNYPDTVTYKIELSDETYLCSSFNVISTDALIALRLNDVYVLSSDGKITWIGKEKEIS
JGI20214J51650_102626693	3300003541	Wetland	MKKIFCILIAVSIIFVVASCSLIGIGGSPTPTSGTVTFSYPSSVVYQIMLSNETYLCSSFSVNNTDAAISLQLKEVYSVASDGKVTWVGADKEITAVKIEKVSK*
Ga0055513_101605661	3300004078	Natural And Restored Wetlands	MKKIFCILIAVSIIFVVASCSLIGIGGSPTPTSGTVTFSYPSSVVYQIMLSNETYLCSSFSVNNTDAAISLQLKEVYSVASDGKVTWVGADKEIT
Ga0069004_102238612	3300005219	Natural And Restored Wetlands	FVFGSCSLIGIGSSTTSSGTVSSNYPDSVVYKIKLSNETYLCSSFNVSNTDTDISLQLNEVYSIASDGKITWIGQTKAVSAVTIEKISK*
Ga0079037_1000162791	3300006224	Freshwater Wetlands	IFTFASCSLIGIGNPTATTSGTVSNYPPSVVYKIQLSNETYLCSSFNVSNTDTGVSLRLNEVYSVSSDGKITWIGNEKDVSAVKIEKISK*
Ga0079037_1006401351	3300006224	Freshwater Wetlands	MKKIYCLLVAISLIFVFASCSLIGIGSPSTTTSGTITNYPASVVYKISLSNETYLCSSFNVSNTDASISLRLTEVYSMSSDGKITWIGQEKVIS
Ga0079037_1006867743	3300006224	Freshwater Wetlands	MMKIICLLVAISCIFVFGSCSLINTGSNTTSEPVSSSYPDSVVYKIKLSNATYLCSSFNVSTTDAGISLALNDVYSVSSDGKITW
Ga0079037_1014730402	3300006224	Freshwater Wetlands	MIKIICLLVAIFCIFTFASCSLINTGNNTTSKPVSSSYPDSVVYKIKLSNVTYLCSSFTVSTTEAGISLALNDVYSMTSDGKITWIAKENVISAVTIEKISK*
Ga0079037_1018764572	3300006224	Freshwater Wetlands	FVFASCSLIGSPTTTPVPVSNYPESVVYKIELSNDTYLCSSFNVSNTDAEISLRLNEVYSISSDGKITWIGKEKEISAVKIEKISK*
Ga0079037_1020337431	3300006224	Freshwater Wetlands	RRTAGIQKPRRGDMKKIFCLLVAISFIFVFASCSLIGIGSPTPTSGTVSNYPDSVVYKIKLSNDTYLCSSFNVSTTDAEISLRLNEVYSMSSDGKITWIGKEKVISAVTIEKISK*
Ga0079037_1020427751	3300006224	Freshwater Wetlands	MKRILCLLVAISLIFIFASCSLIPSGSPTTTPGTVPSNYPDSVVYKIALSNETYLCTSFNVSNTDAGISLRLNEVYSVSSDGKITWVGKEKDISAVKIEKISK*
Ga0079037_1021273442	3300006224	Freshwater Wetlands	MKKIFCFLAAISFIFVFASCSLIPTTTSVPASNYPESVVYKIKLSNETYLCSSFNVSNTDPEISLRLNDVYSISSDGKITWIGKEKEIS
Ga0104751_10076657	3300007351	Deep Subsurface Aquifer	MKKILCLLAAISCIFVFASCSFIGIDSPTATTETVPSNYPDSVVYKIGLSNETYLCSSFNVSNTDAEISLRLNDAYSLSSDGKITWIGKEKEISVVKIEKISK*
Ga0105105_101466821	3300009009	Freshwater Sediment	MKKILCLLVAISSVFVFTSCSLLGIGRPTTTVADYPESVVYRIELPNATYLCSSYNVSNTEAEISLRLSEVYSVSSDGKITWVGTEKEISAVKIEKISK*
Ga0105093_102785171	3300009037	Freshwater Sediment	MKKIFCLLVAISFIFVFTSCSLIGIGSPTTTTGTVPSNYPDSVVYKIELSNETYLCSSFNVSNTDAEISLRLNDAYSLSSDGKITWIGKEKEISVVKIEKISK*
Ga0105095_101400301	3300009053	Freshwater Sediment	MKKLFCLLVAISFIFVFTSCSLIGIGSPTTTTSGTVPSNYPDSVVYKIELSNETYLCSSFNVSNTDAEISLRLNDAYSLSSDGKITWIGKEKEISVVKIEKISK*
Ga0105095_102215711	3300009053	Freshwater Sediment	MKKIFYVLVAISFIFVFASCSLIPSGSPTTNPGTVPSNYPDSVVYKIELSNETYLCSSFNVSNTDAEISLRLNDAYSLSSDGKITWIGKEKEISVVKIEKISK*
Ga0105095_106162201	3300009053	Freshwater Sediment	MKKILCLLVAVSSIFVFTSCSLLGIGRPTTTVADYPESVVYRIELPNATYLCSSYNVSNTEAEISLRLSEVYSVSSDGKITWVGTEKEISAVKIEKISK*
Ga0105106_102779671	3300009078	Freshwater Sediment	MKKILFLLAAVSFVFVFTSCSLIGIGTPTTSVPVPSNYPNSVVYKIELSNETYLCSSFNVSNTDAEISLRLNEVYSISSDGKITW
Ga0105106_104932742	3300009078	Freshwater Sediment	SCSLINTGSDTASETVSSSYPDSVVYKIKLSNETYLCSSFNVSNTDTEISLRLNDVYSMSSDGKITWIGKEKEISAVTIEKISK*
Ga0105106_107862991	3300009078	Freshwater Sediment	VKFWPQYEERGDMKKILFLLVAISSVFVFTSCSLLGIGRPTTTVADYPESVVYRIELPNATYLCSSYNVSNTEAEISLRLSEVYSVSSDGKITWVGTEKEISAVKIEKISK*
Ga0105098_106470141	3300009081	Freshwater Sediment	MKKILYSLVAISFIFLLGSCSLINTSSTTTSSQVSTGYPASVVYKISLSNGTYLCSSFNVSNTDAGISLQLNDVYSMTSDGKITWIGQQKVISAVTIEKISK*
Ga0105099_100177262	3300009082	Freshwater Sediment	MKKILCLLVTISFILILSSCSLIGIGGSTTSGTVSSSYPDSIVYKIKLSNETYLCSSFNVSNTDAGISLLLTDAYSMASDGKITWIGQEKVISAVTIEKISK*
Ga0105107_105773622	3300009087	Freshwater Sediment	MKTLLGLLGAISFIFVLASCSLIGSSNTPTGTVSSSYPDSVVYRITVSNETYLCSSYNVNNTDAQITLRLNDAYSMASDGKITWIGKEKDISAANIEKISK*
Ga0105107_108806571	3300009087	Freshwater Sediment	MKKIFCLLVAISFIFVFTACSLIGIGSPTTTTGTVPPNYPDSVVYKIELSNETYLCSSFNVSNTDAEISLRLNDAYSLSSDGKITWIGKEKEISVV
Ga0102851_100922448	3300009091	Freshwater Wetlands	MKKIFCVLAAISIIFTFASCSLIGIGNPTATTSGTVSNYPPSVVYKIQLSNETYLCSSFNVSNTDTGVSLRLNEVYSVSSDGKI
Ga0102851_106758882	3300009091	Freshwater Wetlands	MIWPQYERRGDMKKILCVLAAMCLIIVFTSCSLIGSKSPTTSGNVPSNYPDSVVYKIKLSNETYLCSSCNVSNTDAEVSLRLTEVYSVSSDGKITWIGKEKEISAVKIERISK*
Ga0102851_110421331	3300009091	Freshwater Wetlands	FASCSLIGIGSSTTPGTVPSNYPDSVVYKIKLSNETYLCSTFNVSNTDAEISLRLSDVYSVSSDGKITWMGKEKEILAVKMERISR*
Ga0102851_111923322	3300009091	Freshwater Wetlands	MKRIFFLLVAISFIFVFGSCSLIPVGSPTTTSGTVSSSYPDSVAYKIALSNETYLCSSFNVSNTDTGISLRLNDAYLISSDGKITWVGKEKEISVVKIEKISK*
Ga0102851_124360601	3300009091	Freshwater Wetlands	MKIICLLVAISCIFVFGSCSLINTGSNTTSEPVSSSYPDSVVYKIKLSNATYLCSSFNVSTTDAGISLALNDVYSVSSDGKIT
Ga0115026_110365382	3300009111	Wetland	MKTIFCLLVAVSIIFAFGSCSLFGTSSTTASEPVSSGYPDSVVYKIKLSNETYLCASFNVSNTDTGISLQLNDVYSMTSDGKITWIGQQKVISAVTIEKISK*
Ga0115026_112925221	3300009111	Wetland	MKRVFYMLLAISSVFVCGACSFINVGNPTTSGTVSSKHPDSVAYKIELSNETYLCSSFNVSNTDDEISLRLNEVYSVSSDGKVTWIGQEKEISAVKIEKISK*
Ga0115027_111870521	3300009131	Wetland	CVLAAMCLIIVFTSCSLIGSKSPTTSGTVPSNYPDSVVYKIKLSNETYLCSSCNVSNTDAEVSLRLNEVYSVSSDGKITWIGKEKEISAVKIERISK*
Ga0105091_100344122	3300009146	Freshwater Sediment	MSKGGDMKKILFLLVAISSVFVFTSCSLLGIGRPTTTVADYPESVVYRIELPDATYLCSSYNVSNTEAEISLQLNEVYSVSSDGKITWVGTEKEISAVKIEKIPK*
Ga0105094_101729052	3300009153	Freshwater Sediment	MKKILCLLVAVSSIFVFTSCSLLGIGRPTTTVADYPECVFYRIELPNATYLCSSYNVSNTEAEISLRLSEVYSVSSDGKITWVGTEKEISAVKVEKISK*
Ga0105094_103233492	3300009153	Freshwater Sediment	MKKILCVLAAISFIFVFASCSLIGIGSPTATSKTVPSNYPASVVYKIQLSNETYLCSSFNVSNTDAGVSLRLNEVYSVSSDGKITWIGKEKEISVVKIEKISK*
Ga0105102_105706842	3300009165	Freshwater Sediment	MKKIFCILIAVCIIFVLASCSLIGLGGSPTPASGTVTSSYPSSVVYKIMLSNETYLCSSFNVSNTDAGVSLQLNDVYSMSSDGKITWMGQEKVISAVTVEKISK*
Ga0105100_101804571	3300009166	Freshwater Sediment	MKKILCLLVVISCIFVFASCSFIGIDSPTATTETVPPNYPDSVVYKIELSNETYLCSSFNVSNTDAEISLRLNDAYSLSSDGKITWIGKEKEISVVKIERISK*
Ga0105100_108334522	3300009166	Freshwater Sediment	ILCLFFAVSAIFVFTSCSLLGIGRPTTTAVADYPESVVYRIELPNATYLCSSYNVSNTEAEISLRLSEVYSVSSDGKITWVGTEKEISAVKIEKIPK*
Ga0105100_109270431	3300009166	Freshwater Sediment	MKKSFCLLVTISFIFLFASCSFFGSGSPTTTGTVPSNYPDSVVYKIQLSNETYLCSSFNVSNTDAEISLRLNDVYLISSDGKIT
Ga0113563_103846921	3300009167	Freshwater Wetlands	MKKIFCVLAAISIIFTFASCSLIGIGNPTATTSGTVSNYPPSVVYKIQLSNETYLCSSFNVSNTDAGVSLRLNEVYSVSSDGKITWIGNEKDVSAVKIEKISK*
Ga0113563_105458312	3300009167	Freshwater Wetlands	MKKILCSLAAISSVFVLGSCSLVGIGSPTTTPGTISSNYPDSVVYKIRLTNEIYLCSSFSVSNTDAEVSLRLNDVYSVSSDGKITWIGKEKQVSAIAMDKVTR*
Ga0113563_106598551	3300009167	Freshwater Wetlands	MKKLLCVLVAVSCIFILASCSSLGIGGSTTPGTVASNYPASVVYKLELSNETYLCSSYNISNTDAGISLRLNEVYSVSSDGKINWIGKEKDISAVKIEKISK*
Ga0113563_107075953	3300009167	Freshwater Wetlands	MKKIYCLLVAISLIFVFASCSLIGIGSPSTTTSGTITNYPASVVYKISLSNETYLCSSFNVSNTDASISLRLTEVYSMSSDGKITWIGQEKVISAVTIEKISK*
Ga0113563_110837762	3300009167	Freshwater Wetlands	VKKIFCVFAAISFIVVFASCSLIGIGSSTTPGTVPSNYPDSVVYKIKLSNETYLCSTFNVSNTDAEISLRLSDVYSVSSDGKITWMGKEKEILAVKMERISR*
Ga0113563_115575431	3300009167	Freshwater Wetlands	VKKLFCVLVSISFIFIFVSCSLIGNDSPTTTSGTTPSNYPDSVVYKIKLSNETYLCSSFNVSDTDTEISLRLNEVYLVSSDGKITWVGKEKVISAVTIEDISK*
Ga0105101_100607823	3300009171	Freshwater Sediment	MKKIFCLLVAISFIFVFTSCSLIGIGSPTTTSGTGPSNYPDSVVYKIELSNETYLCSSFNVSNTDAEISLRLNDAYSLSSDGKITWIGKEKEISVVKIEKISK*
Ga0115028_107550911	3300009179	Wetland	MKKIFCVLVVISFIFVLGSCSLLGGSTTPSGTASSGYPDSVAYKIKLSSETYLCSTYKVSSTDAGISILLSEVYSVSSDGKVTWIGQEKDVSAVSIEKISK*
Ga0115028_107793851	3300009179	Wetland	MSWEGDMKRIFCVLAAISCIFIFASCSIIGIGSPTTSGTVPSNYPDSVAYKIELSTETYLCSSFDVSNTDAEISLRLNDVYSVSSDGKITWIGKEKEISAVKIEKISR*
Ga0115028_116330451	3300009179	Wetland	MSQDRRGDMKKLLGLLVAISFIFVLASCSLIGGSTTPAGTSSSGYPDSVVYKIKVSTDTYLCSSYNVSSTGVGVSLRLNDVYSMASDGKITWIGKGKEVPAVSIEKISR*
Ga0115028_116596682	3300009179	Wetland	IFTFASCSLIGIGNPTATTSGTVSNYPPSVVYKIQLSNETYLCSSFNVNNTDAAISILLKEVYSVASDGKVTWIGAEKEISAVKIEKISK*
Ga0115028_117919301	3300009179	Wetland	MKKIFCLLVAISYIFVTASCSLFGAGSPTTPSGTVSNYPDSVVYKIELSNETYLCSSFIVNNTDTGISLRLNEVYSVSSDGKVTWIGQEKEISAVKIEKISK*
Ga0153915_100408902	3300012931	Freshwater Wetlands	MADPLPGKRRGDMKKIFCLLAAISSVFVLGSCSLIGIGSPTKTTGSVSSNYPDSVVYKIKLSNETYLCSSFNVSNTDAEISLRLNDVYSVSSDGKITWIGKEKQVSAVAMEKITR*
Ga0153915_109026481	3300012931	Freshwater Wetlands	MIKIICLLVAISCIFVFGSCSLINTSSNTTSEPVSSSYPDSVVYKIKLSNGTYLCSSFNVSTTDAGISLALNDVYSMTSDGKITWIAKENVISAVTIEKISK*
Ga0153915_128635912	3300012931	Freshwater Wetlands	FIFVLGSCSLIGASSTTTGTVSSGYPDSVVYKIKLSNETYLCSGFNVSNTDPEISLRLNDVYSISSDGKITWIGKEKEISVVKIEKISKETGVR*
Ga0153916_100281383	3300012964	Freshwater Wetlands	MIKLICLLVAISCIFVFGSCSLINTGSNTTSGPVSSNYPDSVVYKIKLSNGTYLCSSFNVSTTDAGISLALNDVYSMTSDGKITWIAKENVISAVTIEKISK*
Ga0153916_104394283	3300012964	Freshwater Wetlands	MKKIFCVLVAISIIFMFTSCSLIGIGSPTATTSVTASSYPPSVVYKIQLSNETYLCSSFNVSDTDAGVSLRLNEVYSVSSDGKITWIGNEKDVSAVKIEKISK*
Ga0153916_107223523	3300012964	Freshwater Wetlands	MKRVYCLLAAISSVFVLGSCSLIGIGSPTKTTGSVSSNYPDSVVYKIKLSNETYLCSSFNVSNTDAEISLRLNDVYSVSSDGKITWIGKEKQVSAVAMEKITR*
Ga0153916_112810631	3300012964	Freshwater Wetlands	MKKIFCVLVAISFIFVFASCSLIGIRSPTTTSETVPPNYPDSVVYKIELSNETYLCSSFNVSNTDAEISLQLNEVYSVSSDGKITWIGKEKEISAVKIEKISK*
Ga0153916_121898482	3300012964	Freshwater Wetlands	MKKTFCLLVAISFIFVFASCSLIGIGSPTATSKTIPSNYPDSVVYKITLSNETYLCSSFNVSNADAEISLRLNDVYSVSSDGKITWIGKEKEISAVKIEKISK*
Ga0153916_125362821	3300012964	Freshwater Wetlands	MKKVFCLIVVISLVFVFGSCSLIGTTSTTPSGSVSSGYPDNVVYKIKLSNETYLCPIFNASNTDTGISLQLNDVYSMASDGKITWIGQQKMITAVTIEKVSK*
Ga0153916_131772191	3300012964	Freshwater Wetlands	RRRDMKKIFCLLSAVSFTFAFASCSLIPTTTSVPASNYPESVVYKIKLSNETYLCSSFNVNTTDAAISLRLNEAYSISSDGKITWIGKEKEISAVKIEKISK*
Ga0153914_11848473	3300013078	Freshwater Wetlands	MTKIICLLVTISCIFVFGSCSLINTGSNTTSEPVSSNYPDSVVYKIKLSNGTYLCSSFNVSTTDAGISLALNDVYSMTSDGKITWIAKENVISAVTIEKISK*
Ga0153913_13294751	3300013080	Freshwater Wetlands	MTKIICLLVAISCIFVFGSCSLINTSSNTTSEPVSSSYPDSVVYKIKLSNGTYLCSSFNVSTTDAGISLALNDVYSMTSDGKITWIAKENVISAVTIEKIST*
Ga0182017_103967461	3300014494	Fen	MKKIICLLLAISFIFLLASCSLINTSGTTSSSLAPSGYPDSVVYKIGLSNGTYLCSSFIVSNTDAGISLQLNDVYSLSSDGKITWIGQQKAISTVTIEKISK*
Ga0182011_101613811	3300014496	Fen	MKKIICLLLAISFIFLLASCSLINTSGTTSSSLASSGYPDSVVYKIGLSNGTYLCSSFIVSNTDADISLQLNDVYSLSSDGKITWIGQQKAISAVTIEKISK*
Ga0182019_115165971	3300014498	Fen	MKKIICLLVAISFILLIASCSLVGLSSPSPSGTVSSSYPDSVVYKITLSNVTYLCSSFKVSNTDTQISLQLTDVYSLGSDGKITWIGKDKTVPAVAIEKVTK*
Ga0182021_105148052	3300014502	Fen	MKNIFLLLVTMSLILLLGSCSLINTSSTTTSIPVSSGYPDSVVYKISLSNGTYLCSSFNVSNTDAGISLQLNDVYSMSSDGKITWIGQQKVISAVTIEKISK*
Ga0182021_115028241	3300014502	Fen	MKKIICLLLAISFIFLLASCSLINTSGTTSSSLASSGYPDSVVYKIGLSNGTYLCSSFIVSNTDADISLQLNDVYSLSSDGKITWIGQQKAIS
Ga0187866_12023201	3300018015	Peatland	YKRRGYMKKLFLLSVAISFIFIFGSCSLIGIGSSTTSSGTVSSSYPGSVVYKIKLSNETYLCSSFNVSNTDAGVSLRLNDVYSLASDGKITWIGQDKEIAAVIIEKISK
Ga0187861_100415344	3300018020	Peatland	MKKLFLLSVAISFIFIFGSCSLIGIGSSTTSSGTVSSSYPGSVVYKIKLSNETYLCSSFNVSNTDAGVSLRLNDVYSLASDGKITWIGQDKEIAAVIIEKISK
Ga0079039_11244163	3300022185	Freshwater Wetlands	MKRIFFLLVAISFVFVFGSCSLIPVGSPTTTSGIVSSSYPDSVAYKIALSNETYLCSSFNVSNSDTGISLRLNDLYSISSDGKITWIGKEKEISVVKIEKISK
Ga0079039_12186402	3300022185	Freshwater Wetlands	MKKILGVMAVISLVLAFASCSLIRVGGPTTTSGTAPSNYPDSVVYKIALSSETYLCSSFSVSNTDAGISLRLSDVYAISSDGKITWIGKEKEIAAVKIEKISK
Ga0079039_12324742	3300022185	Freshwater Wetlands	CLLAAISSVLVLGSCSLIGVGNTTTTSGTVSSNYPDSVAYKIKLSNVTYLCSSFNVSSTDAEISLRLNDVYSVSSDGKITWIGKEKQVSAVAMEKITR
Ga0079039_13772673	3300022185	Freshwater Wetlands	IFVFASCSLIGIGSPSTTTSGTITNYPASVVYKISLSNETYLCSSFNVSNTDASIPLRLTEVYFMSSDGKITWIGQEKVISAVTIEKISK
Ga0079039_13928062	3300022185	Freshwater Wetlands	MIKIICLLVAISCIFVFGSCSLINTGSNTTSEPVSSSYPDSVVYKIKLSNATYLCSSFNVSTTDAGISLALNDVYSVSSDGKITWIAKENVISAVTIEKISK
Ga0079039_15056432	3300022185	Freshwater Wetlands	MKRIFYLLVAISFIFVFASCSLIPGGSPPTTPGTVPSNYPDSVVYKIALSNETYLCTSFNVSNNDAGISLRLNEVYSVSSDGKITWVGKEKDISAVKIEKISK
Ga0079039_16056993	3300022185	Freshwater Wetlands	IFIFASCSLIKIGSPTTSGTVSSNYPDSVVYKITLSNETYLCSSFNVSNTDAEVSLLLNEVYSIGSDGKITWVGQEKVISAVKIEKVSK
Ga0079039_16179851	3300022185	Freshwater Wetlands	MKIILYFLVVISSVFIFSSCSLIGSDSPATSEPVSSNYPDSVVYKIVLSDATYLCSTFTVSNTDAEISLRLNDVYSVTSKGEITWVGQEKVISAVKIEKVSQ
Ga0212127_102684281	3300022550	Hot Spring Sediment	YRRRGDMKRIFCVLVAISCIFVFASCSLINSGSPTTNSETVPSNYPDSVVYKIELSNETYLCSSFDVSNTDAEISLRLNEVYSVSSDGKITWIGKEKNISAVKIEKIVK
Ga0224520_11462372	3300023075	Soil	MKKIICLLLAISFIFLLASCSLINTSGTTSSSLASSGYPDSVVYKIGLSNGTYLCSSFIVSNTDADISLQLNDVYSLSSDGKITWIGQQKAISAVTIEKISK
Ga0124853_12396343	3300024056	Freshwater Wetlands	MLKIICLLVAIFCIFTFASCSLINTGNNTTSEPVSSSYPDSVVYKIILSNGTYLCSSFNVSTTDVGISLTLSDVYSMTSDGKITWIAKENVISALTIEKISK
Ga0209226_104403052	3300025865	Arctic Peat Soil	RDMKKIICLLAAVSFIFLLGSCSLINTGSTTTSSPVSSGYPDSVVYKISLSNGTYLCATYNVSNTDAGISLQLNDVYSMSSDGKITWIGQQKVISAVTIEKISK
Ga0210129_10771471	3300026026	Natural And Restored Wetlands	MTKILILLVIISFIFVFGSCSLIGIGSSTTSSGTVSSNYPDSVVYKIKLSNETYLCSSFNVSNTDTDISLQLNEVYSIASDGKITWIGQTKAVSAVTIEKISK
Ga0209077_10310842	3300027675	Freshwater Sediment	MKKILFLLVAISSVFVFTSCSLLGIGRPTTTVADYPESVVYRIELPDATYLCSSYNVSNTEAEISLQLNEVYSVSSDGKITWVGTEKEISAVKIEKIPK
Ga0214474_10033066	3300027740	Soil	MIKIICLLVAISCIFAFASCSLINTGSTTTSEPVSSSYPDSVVYKIKLSNGTYLCSSFNVSTTDAGISLALNDVYSMTSDGKITWIAKENVISAVTIEKISK
Ga0214474_13446542	3300027740	Soil	MIGAQIRGPKADTGCGTHGLKFVVADPLPGKRRGHMKKIFCLLAAISSVFVLGSCSLIGIGSPTTTSGTASSNYPDSVVYKIKLSNATYLCSSFNVSNTDAEIYLRLNDVYSVSSDGKIT
Ga0209287_100587822	3300027792	Freshwater Sediment	MKKILCLLVTISFILILSSCSLIGIGGSTTSGTVSSSYPDSIVYKIKLSNETYLCSSFNVSNTDAGISLLLTDAYSMASDGKITWIGQEKVISAVTIEKISK
Ga0209706_105879432	3300027818	Freshwater Sediment	MSQGRRGDMKTLLGLLGAISFIFVLASCSLIGSSNTPTGTVSSSYPDSVVYRITVSNETYLCSSYNVNNTDAQITLRLNDAYSMASDGKITWIGKEKDISAANIEKISK
Ga0272441_104882512	3300028920	Marine Sediment	MKKILCLLVTISCIFIFASCSVIGIDSPTATTDTVPSNYPDSVVYKIELSNETYLCSSFNVSNTDAEISLRLNDAYSISSDGKITWIAKEKEISVVKIEKIFK
(restricted) Ga0247842_106466791	3300029268	Freshwater	MKKILGLLAGIAFIFILSSCSFLGSSSPTTTGTVSSGYPDSVVYKIAISNVTYLCSGYTVSNTDAEISLKLSDVYTMSSDGKITWITKEKDVLAVKLEKVVK
Ga0265297_109269931	3300029288	Landfill Leachate	MKKLLCVLVAISCIFVFASCSLVGIGNPTATSETVPSNYPDSVVYKIKLSNETYLCSSFSASNTDAEISLRLNEVYSISSDGKITWIGQ
Ga0311366_109660591	3300030943	Fen	GIIFVFIPASCSLINSSSTTTSGPVSMGYPDSVVYKIKVASDTYLCSSYTVSNIESGISLSLNTVYSMSSDGKITWIAAQKTVSAVTIEKISK
Ga0307445_102425121	3300031364	Salt Marsh	CVLAAISFIFVFASCSLIGIGGPTPTGTVPSDYPDSVVYKIALSNETYLCTSFNASNTDAGISLRLNEVYSISSDGKITWIGKEKEISAVKIEKISK
Ga0316602_100798511	3300031577	Soil	MKRIFCVLAAISCIFVFTSCSLIGIGSPTTIPGTVPSNYPDSVVYKIELSNETYLCSSFKVNNTDAEISLRLNEVYSVSSDGKITWIGK
Ga0315291_102608332	3300031707	Sediment	MIKIICLLVAIFCIFTFASCSLINTGSTTTSEPVSSSYPDSVVYKIKLSNGIYLCSSFDVSTTDAGISLALNDVYSMTSDGKITWIAKENVISAVTIEKISK
Ga0315291_109614491	3300031707	Sediment	MIKKFWLLVVISFIFVFVSCSLINTGNNNTSEPVSSSYPDSVVYKIKLSNGTYLCSSFNVSTTDAGISLALNDVYSMTSDGKITWIGKENVISA
Ga0302321_1012997353	3300031726	Fen	LFGSCSLINTSSTTTSGLSSIGYPDSVVYKISLANGTYLCSSFNVSNTDTGISLQLNDVYSMSSDGKITWIGQAKTISAVTIEKISK
Ga0315293_106978552	3300031746	Sediment	MIKIICLLVAIFCIFTFASCSLINTGSTTTSEPVSSSYPDSVVYKIKLSNGIYLCSSFNVSTTDAGISLALNDVYSMTSDGKITWIGKENVISAVTIEKISK
Ga0315288_105198131	3300031772	Sediment	MIKKFWLLVVISFIFVFVSCSLINTGNNNNTSEPVSSSYPDSVVYKIKLSNGTYLCSSFNVSTTDAGISLALNDVYSMTSDGKITWIAKENVISAVTIEKISK
Ga0315284_102331033	3300032053	Sediment	MIKKIWLLVVISFIFVFVSCSLINTGNNNNTSEPVSSSYPDSVVYKIKLSNGTYLCSSFNVSTTDAGISLALNDVYSMTSDGKITWIGKENVISAVTIEKISK
Ga0315277_106316373	3300032118	Sediment	MIKKFWLLVVISFIFVFVSCSLINTGNNNTSEPVSSSYPDSVVYKIKLSNGTYLCSSFNVSTTDAGISLALNDVYSMTSDGKITWIAKENVISAVTIEKISK
Ga0315286_103206652	3300032342	Sediment	MIKKFWLLVVISFIFVFVSCSLINTGNNNNTSEPVSSSYPDSVVYKIKLSNGTYLCSSFNVSTTDAGISLALNDVYSMTSDGKITWIGKENVISAVTIEKISK
Ga0315286_122282411	3300032342	Sediment	MIKIICLLVAIFCIFTFASCSLINTGSTTTSEPVSSSYPDSVVYKIKLSNGIYLCSSFNVSTTDAGISLALNDVYSMTSDGKITWIAKENVISAVTIEKISR
Ga0316605_101269731	3300033408	Soil	MKKIFCVLAAISIIFTFASCSLIGIGNPTATTSGTVSNYPPSVVYKIQLSNETYLCSSFNVSNTDTGVSLRLNEVYSVSSDGKITWIGNEKDVSAVKIEKISK
Ga0316603_102930884	3300033413	Soil	MKKIYCLLVAISLIFVFASCSLIGIGSPPTTTSGTTSNYPASVVYKISLSNETYLCSSFNVSNTDASISLRLTEVYSMSSDGKITWIGQEKVISAVTIEKISK
Ga0316603_112549612	3300033413	Soil	MKKLLGLLAAISFIFVSASCSFLGSSTTPSGTASSGYPDSVVYKIKLSNETYLCSSYTVNNTDAEISLRLNDVYSMASDGKITWIGQEKVISAVTIEKITK
Ga0316619_101530981	3300033414	Soil	MKKIFCVLVAISIIFTFASCSLIGIGNPTATTSGTVSNYPPSVVYKIQLSNETYLCSSFNVSNTDAGVSLRLNEVYSVSSDGKITWIGNEKDVSAVKIEKISK
Ga0316619_106412951	3300033414	Soil	MKRIFCVLAAISCIFVFTSCSLIGIGSPTTIPGTVPSNYPDSVVYKIELSNETYLCSSFNVNNTNAEVSLRLNEVYSVSSDGKITWIGKEKEISAI
Ga0316619_122270462	3300033414	Soil	IFVLGSCSLIGTGSTTTSEPVSSGYPESVVYKIKLSNETYLCASFNVSTTDAGISLALNDVYSVSSDGKITWIAKENVISAVTIEKISK
Ga0316625_1008039142	3300033418	Soil	MKRIFCVLAAISCIFVFTSCSLIGIGSPTTIPGTVPSNYPDSVVYKIELSNETYLCSSFNVSNTDTEVSLRLNEVYSVSSEGKITWIGKEKEISAVKIVKVSK
Ga0316601_1000674963	3300033419	Soil	MKKIYCLLVAISLIFVFASCSLIGIGSPSTTTSGTITNYPASVVYKISLSNETYLCSSFNVSNTDASISLRLTEVYSMSSDGKITWIGQEKVISAVTIEKISK
Ga0316613_102760532	3300033434	Soil	MKIIYCVLVVISLIFLCGACSLIGISNPATTGTVSSNYPDTVTYKIELSDETYLCSSFNVISTDALIALRLNDVYVLSSDGKITWIGKEKEISAVKIEKILK
Ga0316613_111248491	3300033434	Soil	MKRIFCVLAAISCIFVFTSCSLIGIGSPTTIPGTVPSNYPDSVVYKIELSNETYLCSSFNVNNTNAEVSLRLNEVYSVSSDGKIT
Ga0316620_100928112	3300033480	Soil	MKKIFCLLAAISSVFVLGSCSLIGIGSPTKTTGSVSSNYPDSVVYKIKLSNETYLCSSFNVSNTDAEISLRLNDVYSVSSDGKITWIGKEKQVSAVAMEKITR
Ga0316620_108864371	3300033480	Soil	MKKIFCLLVAISFIFVFASCSLIGIGSPKPSGTISSNYPEIVVYKITLSNETYLCSSFNVSDTDAQISLRLNEVYSLSSDGKITWIGKEKEISAIKIEKISK
Ga0316620_122134501	3300033480	Soil	MKRIFCLLAAISCIFVFASCSLIPGSNPTTTPGTVPSNYPDSVVYKIALSSETYLCTSFNVSDTDAGISLRLNEVYSISSDGKITWIGKEKEISAVKIEKISK
Ga0316620_125222661	3300033480	Soil	LFCLLVVISFVFVCGSCSLIGIGNPTTSGTVSFNYPDSVAYRIELSNETYLCSSFNVSNTDAEISLRLNDVYSLSSDGKITWVGKEKEISAVRIEKISK
Ga0316600_101593272	3300033481	Soil	MKKICCLLVAISLIFVFASCSLIGIGSPSTTTSGTITNYPASVVYKISLSNETYLCSSFNVSNTDASISLRLTEVYSMSSDGKITWIGQEKVISAVTIEKISK
Ga0316629_104550811	3300033483	Soil	MKRIFCVLAAISCIFVFTSCSLIGIGSPTTIPGTVPSNYPDSVVYKIELSNETYLCSSFNVNNTNAEVSLRLNEVYSVSSDGKITWIGKEKEI
Ga0316624_104928102	3300033486	Soil	MKKIFCVLVAISIIFVFTSCSLIGTGSPTATTSGTVSNYPASVVYKIQLSNETYLCSSFNVSNTDAGVSLRLNEVYSVSSDAKITWIGKEKDLSAVKIEKISK
Ga0316624_117843992	3300033486	Soil	MKKVFCLLVAISFVFVFGSCSLIGIGSPTPTSGTVSSSYPDSVVYKIKLSNETYLCSGFNVSNTDPEISLRLNDVYSISSDGKITWIGKEKEISAAKIEKISK
Ga0316624_123014061	3300033486	Soil	MKKFFCLLSAISFIFVLGSCSIFGIGGTTTPGTVSSNYPDSVVYKIILSNETYLCSSFNVSDTDTEISLRLNEVYSLSSDGKITWLGQEKSISAVKMEKISK
Ga0316630_105800802	3300033487	Soil	MKKILCVLAAMCLIFVFTSCSLIGSKSPTTSGTVPSNYPDSVVYKIKLSNETYLCSSCNVSNTDAEVSLRLNEVYSVSSDGKITWIGKEKEISAVKIEKISK
Ga0316630_109694482	3300033487	Soil	MKRIFCVLAAISCIFIFASCSIIGIGSPTTSGTVPSNYPDSVAYKIELPNETYLCSSFDVSNTDAEISLRLNDVYSVSSDGKITWIGKEKEISAVKIEKISK
Ga0316630_110245151	3300033487	Soil	MKRIFCVLAAISCIFIFTSCSLIGIGSPTTIPGTVPSNYPDSVVYKIELSNETYLCSSFNVINTDADISLRLNEVYSVSSDGKITWIGKEKNILAVKIE
Ga0316630_112565711	3300033487	Soil	MKKLICLLIAVSFVFVFASCSLIGVSSTGTSVPVSSDYPDSVAYKITVSNETYLCSSFNVSNTDTGVSIQLNVVYSISSDGKIIWLGQEKLISAVTIE
Ga0316630_116874742	3300033487	Soil	VKKIFCVFAAISFIVVFASCSLIGIGSSTTPGTVPSNYPDSVVYKIKLSNETYLCSTFNVSNTDAEISLRLSDVYSVSSDGKITWVGKEKEISVANIEKIPK
Ga0299912_106179682	3300033489	Soil	MRKIICLLVAISLIFVFGSCSLIGNGSPTTTSGTVPSNYPDSVVYKIKLSNETYLCSSFTVSNTDTGISLQLNDVYSMSSDGKITWIGQEKVISAVTIEKISK
Ga0316628_1011532571	3300033513	Soil	MADPLPGKRRGDMKKIFCLLAAISSVFVLGSCSLIGIGSPTKTTGSVSSNYPDSVVYKIKLSNETYLCSSFNVSNTDAEISLRLNDVYSVSSDGKITWIGKEKQVSAVAMEKITR
Ga0316628_1014323412	3300033513	Soil	MKKIFILLAAIGIILLFGSCSLIGGTSTTASGTVSSNYPASVVYKIVLSKDTYLCSSFSVSNTDAGVSLQLNEVYSLTPDGKITWIGAQKAVSAVIVEKVSK
Ga0316628_1015327482	3300033513	Soil	MKKIFCLLITIPIIFVFGSCSLIGSSSTSGTVVSNFPDSVVYKITLANETYLCSSYNVSNIDTGISLRLSEAYSISSDGKITWIGQEKEISAVKIEKVPK
Ga0316628_1016328091	3300033513	Soil	MIKIICLLVAISCIFVFGSCSLINTGSNTTSEPVSSNYPDSVVYKIKLSNGTYLCSSFNVSTTDAGISLALNDVYSMTSDGKITWIAKENVISAVTIEKISK
Ga0316628_1035158171	3300033513	Soil	FVFVFGSCSLIGIGSPTTTSGTVSAGYPDSVVYKITLSNETFLCSNFNVSNTDADISPISSDGKITWIGKEKEISAVKIEKISK
Ga0316628_1041063172	3300033513	Soil	NMKNIFVALAAIAIVLVFGSCSLIGGTSANTPATSASTYPDSVVYKIRLSNETFLCSSFNVSNTDAEISLKLNEVYSISSDGKITWLGKEKVVSAVSIEKVSK
Ga0316616_1012883882	3300033521	Soil	MKKILCVLAIISFIFVFASCGLIGSSTATTSGPVSADYPASVVYKIKLSNETYLCSTYNIVNADTGITLRLNEVYSVSSDGKIVWIGKEKEISAV
Ga0316617_1007002761	3300033557	Soil	MKKIFCVLAAISIIFTFASCSLIGIGNPTATTSGTVSNYPPSVVYKIQLSNETYLCSSFNVSNTDAGVSLRLNEVYSVSSDGKITWIGNEKDVSAVKIEKISK
Ga0316617_1011968791	3300033557	Soil	VKKIFCVFAAISFIVVFASCSLIGIGSSTTPGTVPSNYPDSVVYKIKLSNETYLCSTFNVSNTDAEISLRLSDVYSVSSDGKITWMGKEKEILAVKMERISR
Ga0316617_1013175693	3300033557	Soil	MKRIFCVLAAISCIFIFASCSIIGIGSPTTSGTVPSNYPDSVAYKIELSTETYLCSSFDVSNTDAEISLRLNDVYSVSSDGKITWIGKEKEISAVKIEKISR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters