Metagenome / Metatranscriptome Family F048140

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F048140
Family Type	Metagenome / Metatranscriptome
Number of Sequences	148
Average Sequence Length	42 residues
Representative Sequence	MLLHEASIIATKERAEMKMIEFFIARKIVVDGAGHSITKRRAP
Number of Associated Samples	114
Number of Associated Scaffolds	148

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.16 %
% of genes near scaffold ends (potentially truncated)	49.32 %
% of genes from short scaffolds (< 2000 bps)	87.16 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (93.243 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (14.865 % of family members)
Environment Ontology (ENVO)	Unclassified (25.676 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.027 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.52% β-sheet: 0.00% Coil/Unstructured: 46.48%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 148 Family Scaffolds
PF01740	STAS	2.70
PF14534	DUF4440	2.70
PF13211	DUF4019	2.03
PF00085	Thioredoxin	2.03
PF13418	Kelch_4	1.35
PF00383	dCMP_cyt_deam_1	1.35
PF13588	HSDR_N_2	1.35
PF00106	adh_short	0.68
PF01541	GIY-YIG	0.68
PF16177	ACAS_N	0.68
PF01035	DNA_binding_1	0.68
PF12127	FloA	0.68
PF08450	SGL	0.68
PF08327	AHSA1	0.68
PF00211	Guanylate_cyc	0.68
PF13289	SIR2_2	0.68
PF01594	AI-2E_transport	0.68
PF00285	Citrate_synt	0.68
PF13884	Peptidase_S74	0.68
PF13520	AA_permease_2	0.68
PF14020	DUF4236	0.68
PF01872	RibD_C	0.68
PF12704	MacB_PCD	0.68
PF06197	DUF998	0.68
PF00326	Peptidase_S9	0.68

COG ID	Name	Functional Category	% Frequency in 148 Family Scaffolds
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.68
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	0.68
COG0372	Citrate synthase	Energy production and conversion [C]	0.68
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.68
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.68
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.68
COG3371	Uncharacterized membrane protein	Function unknown [S]	0.68
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.68
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.68
COG3695	Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain	Transcription [K]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.92 %
Unclassified	root	N/A	6.08 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.24 %
Unclassified	root	N/A	6.08 %
Viruses	superkingdom	All Organisms → Viruses	0.68 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.24 %
Unclassified	root	N/A	6.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	71.62 %
Unclassified	root	N/A	6.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.35 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	71.62 %
Unclassified	root	N/A	6.08 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	64.19 %
Unclassified	root	N/A	6.08 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	64.19 %
Unclassified	root	N/A	6.08 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	64.19 %
Unclassified	root	N/A	6.08 %
Azohydromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	64.19 %
Unclassified	root	N/A	6.08 %
Azohydromonas australica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas → Azohydromonas australica	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000709\|KanNP_Total_F14TBDRAFT_1005269	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	890	Open in IMG/M
3300002126\|JGI24035J26624_1010543	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	920	Open in IMG/M
3300002903\|JGI24801J43971_1007890	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300005174\|Ga0066680_10490146	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	773	Open in IMG/M
3300005174\|Ga0066680_10554970	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	721	Open in IMG/M
3300005181\|Ga0066678_10874493	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	589	Open in IMG/M
3300005186\|Ga0066676_10268521	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1119	Open in IMG/M
3300005294\|Ga0065705_10354867	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300005328\|Ga0070676_10516045	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	851	Open in IMG/M
3300005329\|Ga0070683_100019687	All Organisms → cellular organisms → Bacteria	5997	Open in IMG/M
3300005332\|Ga0066388_100834206	All Organisms → cellular organisms → Bacteria	1510	Open in IMG/M
3300005332\|Ga0066388_101067271	All Organisms → cellular organisms → Bacteria	1363	Open in IMG/M
3300005332\|Ga0066388_101484663	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1184	Open in IMG/M
3300005347\|Ga0070668_100061747	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2903	Open in IMG/M
3300005364\|Ga0070673_100361286	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1291	Open in IMG/M
3300005466\|Ga0070685_10075161	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2012	Open in IMG/M
3300005540\|Ga0066697_10782285	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	519	Open in IMG/M
3300005553\|Ga0066695_10361204	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	908	Open in IMG/M
3300005556\|Ga0066707_10411176	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	879	Open in IMG/M
3300005556\|Ga0066707_10781765	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	591	Open in IMG/M
3300005576\|Ga0066708_10328686	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	980	Open in IMG/M
3300005586\|Ga0066691_10173507	Not Available	1248	Open in IMG/M
3300005598\|Ga0066706_10294017	Not Available	1277	Open in IMG/M
3300005713\|Ga0066905_101734177	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	574	Open in IMG/M
3300005764\|Ga0066903_100568896	All Organisms → cellular organisms → Bacteria	1951	Open in IMG/M
3300005764\|Ga0066903_101097209	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1467	Open in IMG/M
3300005764\|Ga0066903_101580527	All Organisms → cellular organisms → Bacteria	1242	Open in IMG/M
3300005764\|Ga0066903_102104417	Not Available	1086	Open in IMG/M
3300005764\|Ga0066903_103514772	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300005764\|Ga0066903_106390905	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	615	Open in IMG/M
3300005764\|Ga0066903_108834973	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300005937\|Ga0081455_10969237	Not Available	527	Open in IMG/M
3300006854\|Ga0075425_102173255	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300006954\|Ga0079219_12174017	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	533	Open in IMG/M
3300007788\|Ga0099795_10072060	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1305	Open in IMG/M
3300009012\|Ga0066710_100448172	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1935	Open in IMG/M
3300009012\|Ga0066710_100944846	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1329	Open in IMG/M
3300009038\|Ga0099829_11084704	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	664	Open in IMG/M
3300009137\|Ga0066709_101755581	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	875	Open in IMG/M
3300009143\|Ga0099792_10744494	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300009156\|Ga0111538_10436265	All Organisms → cellular organisms → Bacteria	1660	Open in IMG/M
3300010047\|Ga0126382_10399522	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300010159\|Ga0099796_10435974	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	580	Open in IMG/M
3300010322\|Ga0134084_10237694	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	652	Open in IMG/M
3300010358\|Ga0126370_11001094	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	763	Open in IMG/M
3300010360\|Ga0126372_10619350	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1042	Open in IMG/M
3300010361\|Ga0126378_12350923	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	608	Open in IMG/M
3300010362\|Ga0126377_12375294	All Organisms → cellular organisms → Bacteria → Proteobacteria	606	Open in IMG/M
3300010376\|Ga0126381_100221918	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2541	Open in IMG/M
3300010376\|Ga0126381_100375731	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1972	Open in IMG/M
3300010376\|Ga0126381_103542494	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	613	Open in IMG/M
3300012200\|Ga0137382_10053312	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2535	Open in IMG/M
3300012202\|Ga0137363_11825403	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
3300012207\|Ga0137381_10442549	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300012356\|Ga0137371_10811357	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	713	Open in IMG/M
3300012582\|Ga0137358_10012113	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	5391	Open in IMG/M
3300012582\|Ga0137358_10791112	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	631	Open in IMG/M
3300012683\|Ga0137398_10191458	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1345	Open in IMG/M
3300012683\|Ga0137398_10661414	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	725	Open in IMG/M
3300012685\|Ga0137397_11251062	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	531	Open in IMG/M
3300012685\|Ga0137397_11273544	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	525	Open in IMG/M
3300012885\|Ga0157287_1096839	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	542	Open in IMG/M
3300012896\|Ga0157303_10314882	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	506	Open in IMG/M
3300012897\|Ga0157285_10305510	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M
3300012911\|Ga0157301_10104107	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	838	Open in IMG/M
3300012914\|Ga0157297_10479847	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
3300012915\|Ga0157302_10453189	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M
3300012929\|Ga0137404_10245867	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1534	Open in IMG/M
3300012929\|Ga0137404_10871788	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	820	Open in IMG/M
3300012957\|Ga0164303_11342471	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	531	Open in IMG/M
3300012961\|Ga0164302_10495194	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	861	Open in IMG/M
3300012971\|Ga0126369_11143775	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	868	Open in IMG/M
3300012971\|Ga0126369_12399762	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300015245\|Ga0137409_10217908	All Organisms → cellular organisms → Bacteria	1710	Open in IMG/M
3300015371\|Ga0132258_10133363	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5927	Open in IMG/M
3300015371\|Ga0132258_10677804	All Organisms → cellular organisms → Bacteria	2594	Open in IMG/M
3300015372\|Ga0132256_100673895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas → Azohydromonas australica	1150	Open in IMG/M
3300015374\|Ga0132255_101506968	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1018	Open in IMG/M
3300015374\|Ga0132255_102300002	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	822	Open in IMG/M
3300016341\|Ga0182035_10550879	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300016341\|Ga0182035_11220268	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	672	Open in IMG/M
3300016387\|Ga0182040_10130103	All Organisms → cellular organisms → Bacteria	1762	Open in IMG/M
3300016445\|Ga0182038_10116345	All Organisms → cellular organisms → Bacteria	1976	Open in IMG/M
3300018000\|Ga0184604_10225304	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	652	Open in IMG/M
3300018071\|Ga0184618_10020603	All Organisms → cellular organisms → Bacteria	2155	Open in IMG/M
3300018076\|Ga0184609_10540924	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300018081\|Ga0184625_10389946	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	720	Open in IMG/M
3300019362\|Ga0173479_10559858	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	590	Open in IMG/M
3300019881\|Ga0193707_1115984	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	785	Open in IMG/M
3300019882\|Ga0193713_1056033	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1129	Open in IMG/M
3300019885\|Ga0193747_1123472	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	611	Open in IMG/M
3300019886\|Ga0193727_1026769	All Organisms → cellular organisms → Bacteria	2007	Open in IMG/M
3300019886\|Ga0193727_1047724	All Organisms → cellular organisms → Bacteria	1393	Open in IMG/M
3300019890\|Ga0193728_1026462	Not Available	2894	Open in IMG/M
3300020010\|Ga0193749_1025487	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1154	Open in IMG/M
3300020140\|Ga0179590_1109028	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	748	Open in IMG/M
3300020170\|Ga0179594_10079699	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1152	Open in IMG/M
3300020170\|Ga0179594_10084721	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1122	Open in IMG/M
3300021344\|Ga0193719_10008783	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4216	Open in IMG/M
3300021413\|Ga0193750_1029440	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1255	Open in IMG/M
3300021560\|Ga0126371_10188586	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2151	Open in IMG/M
3300021560\|Ga0126371_10292081	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1755	Open in IMG/M
3300021560\|Ga0126371_11133063	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300021560\|Ga0126371_12725230	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	599	Open in IMG/M
3300021560\|Ga0126371_13869180	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300022534\|Ga0224452_1276968	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	512	Open in IMG/M
3300022756\|Ga0222622_10039803	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2580	Open in IMG/M
3300025315\|Ga0207697_10010500	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3955	Open in IMG/M
3300025929\|Ga0207664_10993539	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	752	Open in IMG/M
3300025938\|Ga0207704_11767058	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300025941\|Ga0207711_11801029	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	555	Open in IMG/M
3300026023\|Ga0207677_11710866	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	583	Open in IMG/M
3300026316\|Ga0209155_1243668	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300026523\|Ga0209808_1188057	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	713	Open in IMG/M
3300026814\|Ga0207586_100192	All Organisms → Viruses → Predicted Viral	1186	Open in IMG/M
3300026853\|Ga0207443_1008064	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	587	Open in IMG/M
3300027643\|Ga0209076_1169783	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300027654\|Ga0209799_1107328	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	634	Open in IMG/M
3300027903\|Ga0209488_10118547	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1991	Open in IMG/M
3300028814\|Ga0307302_10561700	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300028819\|Ga0307296_10520361	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300028878\|Ga0307278_10047583	All Organisms → cellular organisms → Bacteria	1944	Open in IMG/M
3300030844\|Ga0075377_11768073	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	656	Open in IMG/M
3300030916\|Ga0075386_10019742	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	757	Open in IMG/M
3300031093\|Ga0308197_10337339	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	569	Open in IMG/M
3300031231\|Ga0170824_124404835	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1026	Open in IMG/M
3300031446\|Ga0170820_16538624	Not Available	713	Open in IMG/M
3300031474\|Ga0170818_110895484	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	804	Open in IMG/M
3300031573\|Ga0310915_10325624	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1088	Open in IMG/M
3300031573\|Ga0310915_10880521	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300031719\|Ga0306917_10435540	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1026	Open in IMG/M
3300031720\|Ga0307469_11167226	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	726	Open in IMG/M
3300031768\|Ga0318509_10807152	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	519	Open in IMG/M
3300031879\|Ga0306919_10528506	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300031890\|Ga0306925_10068709	Not Available	3725	Open in IMG/M
3300031890\|Ga0306925_10273303	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1820	Open in IMG/M
3300031910\|Ga0306923_11613936	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	674	Open in IMG/M
3300031912\|Ga0306921_10546323	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1344	Open in IMG/M
3300031942\|Ga0310916_10313881	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1329	Open in IMG/M
3300031942\|Ga0310916_10344489	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1266	Open in IMG/M
3300031954\|Ga0306926_10480223	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1529	Open in IMG/M
3300031954\|Ga0306926_10809706	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1128	Open in IMG/M
3300032261\|Ga0306920_100039036	All Organisms → cellular organisms → Bacteria	6851	Open in IMG/M
3300032261\|Ga0306920_100845992	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1340	Open in IMG/M
3300032261\|Ga0306920_101046469	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1186	Open in IMG/M
3300032261\|Ga0306920_102782222	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.84%
Host-Associated	Host-Associated	12.16%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.78%
Plants	Host-Associated → Plants	12.16%
Aquatic	Environmental → Aquatic	4.05%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.78%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.08%
Sediment	Environmental → Aquatic → Sediment	4.05%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.30%
Loam	Environmental → Terrestrial → Soil → Loam	11.49%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.05%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.05%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.03%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.24%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.70%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.03%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.35%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.86%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.11%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.73%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.70%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.03%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.03%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.03%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.35%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.35%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.35%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.35%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.35%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.68%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.68%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.68%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.68%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.68%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.68%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000709	Amended soil microbial communities from Kansas Great Prairies, USA - Total DNA F1.4 TB amended with BrdU and acetate no abondance	Environmental	Open in IMG/M
3300002126	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Host-Associated	Open in IMG/M
3300002903	Soil microbial communities from Manhattan, Kansas, USA - Sample 200um Nextera	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012885	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026814	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A3-10 (SPAdes)	Environmental	Open in IMG/M
3300026853	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A5w-12 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030844	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KanNP_Total_F14TBDRAFT_10052692	3300000709	Soil	MLLHEASIIATKERAKMKMIEFFIARKIVVDGAGHSITKRRSP*
JGI24035J26624_10105431	3300002126	Corn, Switchgrass And Miscanthus Rhizosphere	VLLHEARIIATKERTEMKIIEFFIAGKIVVEGAEHSITNRR*
JGI24801J43971_10078901	3300002903	Soil	MLLHEASIIATKERAEMKMIEFFIARKIVVDGAGHSITKRRAP*
Ga0066680_104901462	3300005174	Soil	LLHEASIIATKERAEMKMIEFFIARKIVVDGAGHSITKRRAP*
Ga0066680_105549702	3300005174	Soil	LLHEASIIATKERAEMKMIEFFIARKIVVDGAGHSITKRRSP*
Ga0066678_108744932	3300005181	Soil	MLLHEASIIATKERAEMKMIEFFIARKIVVDGAGHSITKRRSP*
Ga0066676_102685211	3300005186	Soil	MLLHEASTIATKERAEMKMIEFFIARKIVVDGAGHSITKRRAL*
Ga0065705_103548671	3300005294	Switchgrass Rhizosphere	LLHEASIIATKERAEMKMIEFFIARTIVVDGAGHSITKRRAP*
Ga0070676_105160452	3300005328	Miscanthus Rhizosphere	VLLHEARIIATKERTEMKIIEFFIAGKIVVESAGHSITNRRDPRDTNEAR
Ga0070683_1000196872	3300005329	Corn Rhizosphere	LHEASIIASKQRAEMKMIEFFIAGKIVVDGAGHSITKLRES*
Ga0066388_1008342062	3300005332	Tropical Forest Soil	VHEASIIATKERAEMKMIEFFIARKIVVDGAGHSITKRRES*
Ga0066388_1010672711	3300005332	Tropical Forest Soil	MLAHEASIIATNERAEMKMIEFFIARIVVDGAGHSITERRDS*
Ga0066388_1014846634	3300005332	Tropical Forest Soil	MLSHAGSIIATKDRAEMKMIEVFIARKIVVNGAGHSITKRRAP*
Ga0070668_1000617475	3300005347	Switchgrass Rhizosphere	MLLHEASIIATKERAEMKMIEFFIARRIVVDGAGHSITKRRSP*
Ga0070675_1005063143	3300005354	Miscanthus Rhizosphere	VLLHETRIIATKERTEMKTIEFFIAGKIVVESAGHSITNRR
Ga0070673_1003612862	3300005364	Switchgrass Rhizosphere	VLLHEASIIASKQRAEMKMIEFFIAGKIVVDGAGHSITKLRES*
Ga0070685_100751611	3300005466	Switchgrass Rhizosphere	LHEASIIASKERAEMKMIEFFIAGKIVVDGAGHSITKLRES*
Ga0066697_107822852	3300005540	Soil	MLLHEASIIATKERAEMKMIEFFIARTIVVDGAGHSITKRRSP*
Ga0070665_1020139122	3300005548	Switchgrass Rhizosphere	VLLHETRIIATKERTEMKIIEFFIAGKIVVESAGH
Ga0066695_103612041	3300005553	Soil	MLLHEASIIATKERAEMKMIEFFIARKIVVDGAGHSFTKRRSP*
Ga0066707_104111762	3300005556	Soil	IATKERAEMKMIEFFIARKIVVDGAGHSITKRRAL*
Ga0066707_107817651	3300005556	Soil	LHEASIIATKERAEMKMIEFFIARKIVVDGAGHSITKR
Ga0066708_103286861	3300005576	Soil	AVSSGAKTLLHEASIIATKERAEMKMIEFFIAGTIVVDGAGHSITKRRAP*
Ga0066691_101735071	3300005586	Soil	LLHEASIIATKERAEMKMIEFFIARKMVVDGAGHSITKRRAP*
Ga0066706_102940171	3300005598	Soil	LGMLLHEASIIATKERAEMKMIEFFIARKMVVDGAGHSITKRRAP*
Ga0066905_1017341772	3300005713	Tropical Forest Soil	KALGMLLHEASIIPTKERTEMKMIEFFIARKIVVDGAGHSITKRRGS*
Ga0066903_1005688962	3300005764	Tropical Forest Soil	MLLHEASIITTKERAEMKMIDFFIARKIVVDGAGHSITKRRES*
Ga0066903_1010972092	3300005764	Tropical Forest Soil	VESGSKTLLHEASIIAAKERAEMKMIEFFIIRKIVVDGARHSITKRRQP*
Ga0066903_1015805273	3300005764	Tropical Forest Soil	MLSHAGSIIATKERAEMKMIEFFIARKIVVDGAGHSITKRRAL*
Ga0066903_1021044172	3300005764	Tropical Forest Soil	MLLHEASIIATKERAEMKMIELFIARKIVVDGAGHSITKRREA*
Ga0066903_1035147722	3300005764	Tropical Forest Soil	MLLHEASIIAAKERAEMKMIEFFIARKIVVDGAGHSITKRRQS*
Ga0066903_1063909052	3300005764	Tropical Forest Soil	MLLHEASITAAKERAEMKMIQFFIAREIVVDGAGHSITKRRAR*
Ga0066903_1088349732	3300005764	Tropical Forest Soil	ALGTLLHEASIIATKERAEMKMIEFFIARRIVVDGAGHSTTLRRKP*
Ga0081455_109692371	3300005937	Tabebuia Heterophylla Rhizosphere	IIATKERAEMKMIEVFIARKVVVYGAGISIKKAP*
Ga0075425_1021732551	3300006854	Populus Rhizosphere	MLLHEASIIATKERAEMKMIEFFIARKIVVDGAGHSITKRRAR*
Ga0079219_121740171	3300006954	Agricultural Soil	LHEASIIATKERAEMKMIEFFIARKIVVEGAAHSITKRDKP*
Ga0099795_100720602	3300007788	Vadose Zone Soil	MLLHEASIIATKERAEMKMIEFFIARKIVVDGAGHSSTKRRSP*
Ga0066710_1004481723	3300009012	Grasslands Soil	LLHEASIIATKERAEMKMIEFFIARKIVVDGAGHSITKRRSP
Ga0066710_1009448464	3300009012	Grasslands Soil	SSGAKTLLHEASIIATKERAEMKMIEFFIARTIVVDGAGHSITKRLAP
Ga0099829_110847041	3300009038	Vadose Zone Soil	MLLHEASIIATKESAEMKMIEFFIARKIVVDGAGHSITKRRSP*
Ga0066709_1017555812	3300009137	Grasslands Soil	MLLHEASIIATKERAEMKMIEFFIARKMVVDGAGHSITKRRAP*
Ga0099792_107444942	3300009143	Vadose Zone Soil	MLLHEASIIATKERAEMKMIEFFMARKIVVDGAGYSITKRRSP*
Ga0111538_104362651	3300009156	Populus Rhizosphere	LHEASVIATKERPEMKMFEFFIAKRIVVDGAGHSITKSL
Ga0126382_103995222	3300010047	Tropical Forest Soil	MLSHEASIIATKERAEMKMIEFFIARKIVVDGAGHSITNRCES*
Ga0099796_104359742	3300010159	Vadose Zone Soil	MLLHEASIIATKERAEMKMIEFFIARKIVVDGAGYSITKRRSP*
Ga0134084_102376941	3300010322	Grasslands Soil	MLLHEASIIATKERAEMKMIEFFIARKNVVDGAGHSITKRRSL*
Ga0126370_110010942	3300010358	Tropical Forest Soil	LHEASIIAAKERAEMKMIEFFIARKIVVDGAGHSITKRRQP*
Ga0126372_106193503	3300010360	Tropical Forest Soil	MLSHAGSIIATKERAEMKMIEFFIARKIVVDGAGHSITKRREP*
Ga0126378_123509231	3300010361	Tropical Forest Soil	HEASIIAAKERAEMKMIEFFIAREIVVEGAGHSITKRRAP*
Ga0126377_123752942	3300010362	Tropical Forest Soil	LSHEASIIATKERAEMKMIEFFIARKIVVGGARHSITMRRAP*
Ga0126381_1002219182	3300010376	Tropical Forest Soil	MLLHEASIIAAKERAEVKMIEFFIAREIVVEGAGHSITKRRAP*
Ga0126381_1003757314	3300010376	Tropical Forest Soil	MLSHEASITATKERAEMKMIEFFIIKEIVVEGVGHSITKRCES*
Ga0126381_1035424941	3300010376	Tropical Forest Soil	MLLHEASIIATKERAEMKMIEFFIARKIVVDGAGHSITNRRES*
Ga0137382_100533124	3300012200	Vadose Zone Soil	MLLHEASIIATKERAEMKMIEFFIARKIVVDGAGHLITKRRSP*
Ga0137363_118254031	3300012202	Vadose Zone Soil	MLLHEASIIATKEKAEMKMIEFFIARKIIVDGAGHSITKRRSPQSV*
Ga0137381_104425493	3300012207	Vadose Zone Soil	MLLHEASIIATKERAEMKMIEFFTARKIVVDGAGHSITKRRSP*
Ga0137371_108113571	3300012356	Vadose Zone Soil	MLLHEANIIATKERAEMKMIEFFIARKIVVDGAGHSITKRRAP*
Ga0137358_1001211310	3300012582	Vadose Zone Soil	MLLHEASIIATKERAEMKMIEFFIARKIVVDGAGHSITKR
Ga0137358_107911122	3300012582	Vadose Zone Soil	AKALGMLLHEASIIATKERAEMKMIEFFIARKIVVDGAGHLITKRRSP*
Ga0137398_101914582	3300012683	Vadose Zone Soil	HEASIIATKERADMKMIEFSIARTIVVDGAGHSSTKRRSP*
Ga0137398_106614141	3300012683	Vadose Zone Soil	TKALGMLLHEANIIGTKERAEMKMIVFFMARKIVVDGAGHSITKRRSP*
Ga0137397_112510621	3300012685	Vadose Zone Soil	LHEASIIATKERAEMKMIEFFIARTIVVDGAGHSITK
Ga0137397_112735443	3300012685	Vadose Zone Soil	ASIIATKERAEMKMIEFFIARTIVVDGAGHSITKRRAP*
Ga0157287_10968392	3300012885	Soil	MLLHEASIIATKERAEMKMIEFFIARKIVVDGAGHSITKSRES*
Ga0157303_103148822	3300012896	Soil	IATKERAEMKMIEFSIARKIVVDGAGHSITKRRAP*
Ga0157285_103055101	3300012897	Soil	SIIKERAEMKMIEFFIAGKIVVEGAGHSITNRRDPQRHKRSPQGE*
Ga0157301_101041072	3300012911	Soil	MLLHEASIIATKERAEMKMIEFFIARKIVVDGAGHSITERRAP*
Ga0157297_104798472	3300012914	Soil	VLLHEARIIATKERAEMKTIEFFIAGKIVVDRAGHSITNRREPIDID
Ga0157302_104531892	3300012915	Soil	HEASIIATKERAEMKMIEFFIARKIVVHGAGHSITKRRAP*
Ga0137404_102458673	3300012929	Vadose Zone Soil	VHEASIIAPKERAEMKMIEFFIARKIVVDGAGHSITKRRAP
Ga0137404_108717881	3300012929	Vadose Zone Soil	SIIATKERAEMKMIEFFIARTIVVDGAGHSITKRRAP*
Ga0164303_113424711	3300012957	Soil	MLLHEASIIATKERAEMKMIEFFIARKIVVYGAGHS
Ga0164302_104951941	3300012961	Soil	ASIIATKERAEMKMIEFFIARKIVVDGAGHSITKRRAP*
Ga0126369_111437751	3300012971	Tropical Forest Soil	HEASIIATKERAEMKMIEFFIARKIVVDGAGHSITKRRES*
Ga0126369_123997621	3300012971	Tropical Forest Soil	MLLYEASIIATKERAGMKMNEFFIGRKIVIDGAGHS
Ga0137409_102179082	3300015245	Vadose Zone Soil	MLLHEASIIATKERAEMKMIEFFIARTIVVDGAGHSITKRRAP*
Ga0132258_101333638	3300015371	Arabidopsis Rhizosphere	MLLHEASIIATKERAEMKMIEFFIARKIVVDGAGHSTTKRLAP*
Ga0132258_106778041	3300015371	Arabidopsis Rhizosphere	SSGAKALGMLLHEASIIATKERAEMKMIGFFIARKIVVDGARHSITKRHAP*
Ga0132256_1006738953	3300015372	Arabidopsis Rhizosphere	HEASIIATKERAEMKMIGFFIARKIVVDGARHSITKRHAP*
Ga0132255_1015069681	3300015374	Arabidopsis Rhizosphere	ASIIATKERAEMKMIEFFIARKIVVDGAGHSTTKRLAP*
Ga0132255_1023000021	3300015374	Arabidopsis Rhizosphere	MLLHEASIIATKQRAEMKMIEFLIARKIVVDGAGHSITNRCES*
Ga0182035_105508791	3300016341	Soil	IIATKERAEMKMIEFFIARKIVVDGAGHSITKRRAQ
Ga0182035_112202681	3300016341	Soil	GAKALGMLLHEASIIATKERAEMKMIEFFIARRIVVDGAGHSITKRRAR
Ga0182040_101301034	3300016387	Soil	MLLHEASIIATEERAEMKMIEFFIARKIVVDGAGHSITKRRAR
Ga0182038_101163453	3300016445	Soil	MLLHEVSIIAAKERAEMKMIEFFIARKIVVDGAGHSITKRRAR
Ga0184604_102253041	3300018000	Groundwater Sediment	MLLHEASIIATKERAEMKMIEFFIARKIVVDGAGHSITKRRSP
Ga0184618_100206035	3300018071	Groundwater Sediment	MLLHEASIIATKERAEMKMIEFFIARKIIVDGAGHSITKRRSP
Ga0184609_105409242	3300018076	Groundwater Sediment	SSGAKALGMLLHEASIIATKERAEMKMIEFFIARKIIVDGAGHSITKRHAP
Ga0184625_103899462	3300018081	Groundwater Sediment	MLLHEASIIATKERAEMKMIEFFIARKIVVDGAGHSIT
Ga0173479_105598582	3300019362	Soil	VLHEASIIATKERAEMKMIEFFIARKIVVDGAGHSITKSRES
Ga0193707_11159841	3300019881	Soil	MLLHEASIIATKERAEMKMIEFFIARKIIVDGAGHSITKRRSPQSV
Ga0193713_10560332	3300019882	Soil	MLLHEASIIATKERAEMKMIEFFIARKIVVDGAGHSITKRRAP
Ga0193747_11234721	3300019885	Soil	GMLLHEASIIATKERAEMKMIEFFIARKIVVDGAGHSITKRRSP
Ga0193727_10267694	3300019886	Soil	EASIIATKERAEMKMIEFFIARKIVVDGAGHSITKRRLP
Ga0193727_10477241	3300019886	Soil	IATKERAEMKMIEFFIARTIVVDGAGHSITKRRAACGELS
Ga0193728_10264621	3300019890	Soil	MLLHEASIIATKERAEMKMIEFFIARIIVVDGAGHSITKRRSP
Ga0193749_10254872	3300020010	Soil	MLLHEANIIATKERTEMKMIEFFIARKIVVDGAGHSSTKRRSP
Ga0179590_11090282	3300020140	Vadose Zone Soil	MLLHEASIIATKERAEMKMIEFFIARKIVVDGAGHSSTKRRSP
Ga0179594_100796992	3300020170	Vadose Zone Soil	SIIATKEMAEMKMIEFFIARKIVVDGAGHSITKRRSP
Ga0179594_100847213	3300020170	Vadose Zone Soil	MLLHEASIIATKERAEMKMIEFFIARKIVVDGAGHLITKRRSP
Ga0193719_100087831	3300021344	Soil	GMLLHEASIIATKERAEMKMIEFFIARKIVVDGAGHSITKRRAP
Ga0193750_10294401	3300021413	Soil	MLLHEANIIATKERTEMKMIEFFIARIIVVDGAGHSITKRRSP
Ga0126371_101885862	3300021560	Tropical Forest Soil	MLSHAGSIIATKDRAEMKMIEVFIARKIVVNGAGHSITKRRAP
Ga0126371_102920812	3300021560	Tropical Forest Soil	VESGSKTLLHEASIIAAKERAEMKMIEFFIIRKIVVDGARHSITKRRQP
Ga0126371_111330631	3300021560	Tropical Forest Soil	MFSHEASIIATKERAEMKMIEFFIARKIVVDDAGHSITERREP
Ga0126371_127252301	3300021560	Tropical Forest Soil	MLSHEDSIIATKERAEMKMIEFFIIKEIVVEGVGHSITKRCES
Ga0126371_138691801	3300021560	Tropical Forest Soil	IATKERAEMKMIEFCIAKEIVVDGTGHSITKCRQS
Ga0224452_12769681	3300022534	Groundwater Sediment	LHEASIIATKERAEMKMIEFFIARTIVVDGAGHPIAK
Ga0222622_100398033	3300022756	Groundwater Sediment	MLLHEASIIATKERAEMKMIEFFIARKIVVDGAGHSITKRRLP
Ga0207697_100105004	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	LLHEASIIASKQRAEMKMIEFFIAGKIVVDGAGHSITKLRES
Ga0207664_109935393	3300025929	Agricultural Soil	GAKALGTLLHEANIIATKERAEMKMIEFFIARKTVVDGAGHSITKRRAP
Ga0207704_117670581	3300025938	Miscanthus Rhizosphere	EASIIATKERTEMKMIEFFIARRIVVDGAGHSITKRRAS
Ga0207711_118010291	3300025941	Switchgrass Rhizosphere	LEVLLHEASIIASKQRAEMKMIEFFIAGKIVVDGAGHSITKLRES
Ga0207677_117108661	3300026023	Miscanthus Rhizosphere	ALEVLLHEASIIASKQRAEMKMIEFFIAGKIVVDGAGHSITKLRES
Ga0209155_12436682	3300026316	Soil	LHEASIIATKERAEMKMIEFFIARKIVVDGAGHSITKRRS
Ga0209808_11880572	3300026523	Soil	MLLHEASIIATKERAEMKMIEFFIARKIVVDGAGHSITKRRSL
Ga0207586_1001921	3300026814	Soil	MLLHEASIIATKERAEMKMIEFFIVRKIVVDGAGHSITERRAP
Ga0207443_10080642	3300026853	Soil	ASIIATKERAEMKMIEFFIARKIVVHGAGHSITKRRAP
Ga0209076_11697831	3300027643	Vadose Zone Soil	MLLHEASIIATKERAEMKMIEFFIARKIVVDGAGHSITKRRGS
Ga0209799_11073281	3300027654	Tropical Forest Soil	MLSHEASIIATKERAEMKMIEFFIARKIVVDGAGHSITNRCES
Ga0209488_101185473	3300027903	Vadose Zone Soil	MLLHEASIIATKERAEMKMIEFFIARKIVVDGAGH
Ga0307302_105617002	3300028814	Soil	EASIIATKERAEMKMIEFFIARTIVVDGAGHSITKRRAACGELS
Ga0307296_105203611	3300028819	Soil	EASIIATKERAEMKMIEFFIARKIIVDGAGHSITKRRSPQSV
Ga0307278_100475834	3300028878	Soil	MLLHEASIIATKERAEMKMIEFFIARRIVVDGAGH
Ga0075377_117680732	3300030844	Soil	LHEASIIATKERAEMKMIEFFIARKIVVDGAGHSITKRR
Ga0075386_100197421	3300030916	Soil	MLLHEASIIATKERAEMKMIEFFIARKIVVHGAGHSITNCCES
Ga0308197_103373392	3300031093	Soil	LHEASIIATKERAEMKMIEFFIARTIVVDGAGHSI
Ga0170824_1244048351	3300031231	Forest Soil	VSSGAKALLHEASIVATKERAEMKMIEFFIAIKIVVDGAGHSMTKRRS
Ga0170820_165386242	3300031446	Forest Soil	IIATKERAEMKMIEFFIARKIVVDGAGHSITKRRAP
Ga0170818_1108954841	3300031474	Forest Soil	EASIIATKERAEMKMIEFFIARRIVVDGAGHSITKRRAP
Ga0310915_103256241	3300031573	Soil	MLLHEVSIIAAKERAEMKMIEFFIARKIVVDGAGHSITKRRAP
Ga0310915_108805212	3300031573	Soil	MLLHEASIIAAKERAEMKMIEFFIARKIVVDGAGHSITKRRQS
Ga0306917_104355401	3300031719	Soil	HEASIIAAKERAEMKMIEFFIARKIVVDGAGHSITKRRQS
Ga0307469_111672261	3300031720	Hardwood Forest Soil	LHEANIIATKERAEMKMIEFFIARKIVVDGAGHSITKRRAP
Ga0318509_108071521	3300031768	Soil	LHEASIIAAKERAEMKMIEFFIARKIVVDGAGHSITKRREP
Ga0306919_105285063	3300031879	Soil	MLLHEASIIATKERAEMKMIEFFIARKIVVDGAGHSITKRRAQ
Ga0306925_100687094	3300031890	Soil	MLLHEVSIIAAKERAEMKMIEFFIARKIVVDGAGHSITKRRQS
Ga0306925_102733031	3300031890	Soil	KALGMLLHEVSIIAAKERAEMKMIEFFIARKIVVDGAGHSITKRRQS
Ga0306923_116139362	3300031910	Soil	MFSQEASIIATKERAEMKMIEFFIARKIVVNGAGHSITNRRQS
Ga0306921_105463231	3300031912	Soil	LHEASIIATKERAEIKMIEFFIARKIVVDGAGHSITKR
Ga0310916_103138813	3300031942	Soil	MLLHEASIIATKERAEMKMIEFFIARKIVVDGAGHSITKRRQS
Ga0310916_103444892	3300031942	Soil	MLLHEASIIATKERAEMKRIEFFIARKIIVDGAGHSITNRRQS
Ga0306926_104802233	3300031954	Soil	MLLHEDSIIATKERAEMKMIEFFIARKIVVYNAGHSITNRRES
Ga0306926_108097061	3300031954	Soil	SIIAAKERAEMKMIEFFIARKIVVDGAGHSITKRRQS
Ga0306920_1000390361	3300032261	Soil	SGAKALGMLLHEDSIIATKERAEMKMIEFFIARKIVVYNAGHSITNRRES
Ga0306920_1008459921	3300032261	Soil	MLLHEVSIIAAKERAEMKMIEFFIARKIVVDGAGHSITKR
Ga0306920_1010464692	3300032261	Soil	MLLHEASIIATKERAEMKMIELFIARKIVVDGAGHSITKRREQ
Ga0306920_1027822221	3300032261	Soil	MLLHEASIIATKERAEMKMIEFFIARKIVVDGAGHSITKRRAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F048140

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences