Metagenome / Metatranscriptome Family F048201

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F048201
Family Type	Metagenome / Metatranscriptome
Number of Sequences	148
Average Sequence Length	56 residues
Representative Sequence	MAENSSSSVASVAIVVIILLAIFAFYFLFGRGVHAKRDINIDIKGPAHELPIDQR
Number of Associated Samples	110
Number of Associated Scaffolds	148

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.23 %
% of genes near scaffold ends (potentially truncated)	28.38 %
% of genes from short scaffolds (< 2000 bps)	83.11 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.865 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (18.919 % of family members)
Environment Ontology (ENVO)	Unclassified (35.811 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.432 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.76% β-sheet: 0.00% Coil/Unstructured: 60.24%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 148 Family Scaffolds
PF03372	Exo_endo_phos	47.30
PF13458	Peripla_BP_6	14.19
PF01863	YgjP-like	4.73
PF13520	AA_permease_2	4.05
PF02653	BPD_transp_2	2.03
PF13906	AA_permease_C	1.35
PF12911	OppC_N	0.68
PF13180	PDZ_2	0.68
PF09970	DUF2204	0.68
PF13240	zinc_ribbon_2	0.68
PF13847	Methyltransf_31	0.68
PF00392	GntR	0.68
PF13433	Peripla_BP_5	0.68
PF08534	Redoxin	0.68
PF08982	AtaL	0.68
PF06240	COXG	0.68
PF12867	DinB_2	0.68
PF03683	UPF0175	0.68

COG ID	Name	Functional Category	% Frequency in 148 Family Scaffolds
COG1451	UTP pyrophosphatase, metal-dependent hydrolase family	General function prediction only [R]	4.73
COG2886	Predicted antitoxin, contains HTH domain	General function prediction only [R]	0.68
COG3427	Carbon monoxide dehydrogenase subunit CoxG	Energy production and conversion [C]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.54 %
Unclassified	root	N/A	9.46 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.54 %
Unclassified	root	N/A	9.46 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.86 %
Unclassified	root	N/A	9.46 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	43.24 %
Unclassified	root	N/A	9.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.70 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.68 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.46 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.05 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.70 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.68 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.05 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.70 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.68 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.05 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.70 %
Halobacteriales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales	0.68 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.05 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.70 %
Halococcaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Halococcaceae	0.68 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.05 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.70 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	0.68 %
Halococcus	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Halococcaceae → Halococcus	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.05 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.70 %
Halococcus agarilyticus	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Halococcaceae → Halococcus → Halococcus agarilyticus	0.68 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105252812	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10018709	All Organisms → cellular organisms → Bacteria	1903	Open in IMG/M
3300000956\|JGI10216J12902_102656123	All Organisms → cellular organisms → Bacteria → Acidobacteria	843	Open in IMG/M
3300002558\|JGI25385J37094_10085485	All Organisms → cellular organisms → Bacteria → Acidobacteria	967	Open in IMG/M
3300002560\|JGI25383J37093_10184135	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300002561\|JGI25384J37096_10077116	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300002908\|JGI25382J43887_10034993	All Organisms → cellular organisms → Bacteria	2721	Open in IMG/M
3300003267\|soilL1_10097355	All Organisms → cellular organisms → Bacteria	7494	Open in IMG/M
3300003324\|soilH2_10156488	All Organisms → cellular organisms → Bacteria	2001	Open in IMG/M
3300004281\|Ga0066397_10019726	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300004463\|Ga0063356_100851464	All Organisms → cellular organisms → Bacteria	1280	Open in IMG/M
3300004463\|Ga0063356_101063356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1162	Open in IMG/M
3300004463\|Ga0063356_101731679	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300004479\|Ga0062595_100812951	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300004480\|Ga0062592_101091210	All Organisms → cellular organisms → Bacteria → Acidobacteria	737	Open in IMG/M
3300004633\|Ga0066395_10100398	All Organisms → cellular organisms → Bacteria	1393	Open in IMG/M
3300004801\|Ga0058860_11373539	All Organisms → cellular organisms → Bacteria → Acidobacteria	682	Open in IMG/M
3300005093\|Ga0062594_101502073	Not Available	691	Open in IMG/M
3300005166\|Ga0066674_10013237	All Organisms → cellular organisms → Bacteria	3462	Open in IMG/M
3300005166\|Ga0066674_10251161	All Organisms → cellular organisms → Bacteria → Acidobacteria	838	Open in IMG/M
3300005171\|Ga0066677_10122033	All Organisms → cellular organisms → Bacteria	1402	Open in IMG/M
3300005177\|Ga0066690_10263307	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300005180\|Ga0066685_10299711	All Organisms → cellular organisms → Bacteria → Acidobacteria	1112	Open in IMG/M
3300005180\|Ga0066685_10357003	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300005180\|Ga0066685_10815224	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300005293\|Ga0065715_11067883	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300005295\|Ga0065707_10595341	All Organisms → cellular organisms → Bacteria → Acidobacteria	693	Open in IMG/M
3300005330\|Ga0070690_100794676	All Organisms → cellular organisms → Bacteria → Acidobacteria	733	Open in IMG/M
3300005332\|Ga0066388_100045386	All Organisms → cellular organisms → Bacteria	4421	Open in IMG/M
3300005332\|Ga0066388_100365348	All Organisms → cellular organisms → Bacteria	2090	Open in IMG/M
3300005332\|Ga0066388_103054432	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300005445\|Ga0070708_100872961	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300005445\|Ga0070708_101139124	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M
3300005446\|Ga0066686_10074041	All Organisms → cellular organisms → Bacteria	2141	Open in IMG/M
3300005446\|Ga0066686_10174564	All Organisms → cellular organisms → Bacteria	1431	Open in IMG/M
3300005447\|Ga0066689_10863603	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300005451\|Ga0066681_10301800	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300005451\|Ga0066681_10511374	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300005518\|Ga0070699_102188034	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300005552\|Ga0066701_10320234	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300005553\|Ga0066695_10516943	All Organisms → cellular organisms → Bacteria → Acidobacteria	731	Open in IMG/M
3300005555\|Ga0066692_10110703	All Organisms → cellular organisms → Bacteria	1642	Open in IMG/M
3300005558\|Ga0066698_10501873	All Organisms → cellular organisms → Bacteria → Acidobacteria	824	Open in IMG/M
3300005561\|Ga0066699_10980640	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300005561\|Ga0066699_11024928	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300005598\|Ga0066706_10509139	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300005598\|Ga0066706_10910925	All Organisms → cellular organisms → Bacteria → Acidobacteria	684	Open in IMG/M
3300005713\|Ga0066905_101801043	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Halococcaceae → Halococcus → Halococcus agarilyticus	565	Open in IMG/M
3300005764\|Ga0066903_100413403	All Organisms → cellular organisms → Bacteria	2228	Open in IMG/M
3300005764\|Ga0066903_104242182	All Organisms → cellular organisms → Bacteria → Acidobacteria	767	Open in IMG/M
3300006046\|Ga0066652_101651338	Not Available	586	Open in IMG/M
3300006794\|Ga0066658_10259946	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300006796\|Ga0066665_10168812	All Organisms → cellular organisms → Bacteria	1675	Open in IMG/M
3300006844\|Ga0075428_100402213	All Organisms → cellular organisms → Bacteria	1467	Open in IMG/M
3300006845\|Ga0075421_100694403	All Organisms → cellular organisms → Bacteria → Acidobacteria	1184	Open in IMG/M
3300006852\|Ga0075433_11803099	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300006853\|Ga0075420_100783227	All Organisms → cellular organisms → Bacteria → Acidobacteria	821	Open in IMG/M
3300006854\|Ga0075425_100389291	All Organisms → cellular organisms → Bacteria → Acidobacteria	1606	Open in IMG/M
3300006871\|Ga0075434_100564247	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300006871\|Ga0075434_101612217	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300006880\|Ga0075429_101431918	All Organisms → cellular organisms → Bacteria → Acidobacteria	602	Open in IMG/M
3300006904\|Ga0075424_100964466	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300006904\|Ga0075424_101267148	All Organisms → cellular organisms → Bacteria → Acidobacteria	784	Open in IMG/M
3300007004\|Ga0079218_11658789	All Organisms → cellular organisms → Bacteria → Acidobacteria	705	Open in IMG/M
3300007076\|Ga0075435_101755464	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300009012\|Ga0066710_100011751	All Organisms → cellular organisms → Bacteria	8951	Open in IMG/M
3300009012\|Ga0066710_100824185	All Organisms → cellular organisms → Bacteria	1424	Open in IMG/M
3300009090\|Ga0099827_10742968	All Organisms → cellular organisms → Bacteria → Acidobacteria	848	Open in IMG/M
3300009100\|Ga0075418_12037118	Not Available	625	Open in IMG/M
3300009137\|Ga0066709_100133583	All Organisms → cellular organisms → Bacteria → Acidobacteria	3133	Open in IMG/M
3300009137\|Ga0066709_102496972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300009137\|Ga0066709_103939311	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300009147\|Ga0114129_10009031	All Organisms → cellular organisms → Bacteria	14206	Open in IMG/M
3300009147\|Ga0114129_10211171	All Organisms → cellular organisms → Bacteria	2624	Open in IMG/M
3300009147\|Ga0114129_10303550	All Organisms → cellular organisms → Bacteria → Acidobacteria	2127	Open in IMG/M
3300009156\|Ga0111538_13969417	Not Available	511	Open in IMG/M
3300009177\|Ga0105248_11407754	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300010043\|Ga0126380_11645018	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M
3300010303\|Ga0134082_10553198	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300010359\|Ga0126376_11756786	All Organisms → cellular organisms → Bacteria → Acidobacteria	657	Open in IMG/M
3300010362\|Ga0126377_11389897	All Organisms → cellular organisms → Bacteria → Acidobacteria	775	Open in IMG/M
3300010366\|Ga0126379_12638783	All Organisms → cellular organisms → Bacteria → Acidobacteria	600	Open in IMG/M
3300010398\|Ga0126383_13220841	Not Available	533	Open in IMG/M
3300010401\|Ga0134121_11846989	All Organisms → cellular organisms → Bacteria → Acidobacteria	632	Open in IMG/M
3300012041\|Ga0137430_1195392	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300012198\|Ga0137364_10378438	Not Available	1058	Open in IMG/M
3300012206\|Ga0137380_11137031	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300012212\|Ga0150985_107259758	Not Available	512	Open in IMG/M
3300012212\|Ga0150985_114093394	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300012212\|Ga0150985_118898945	All Organisms → cellular organisms → Bacteria → Acidobacteria	2107	Open in IMG/M
3300012353\|Ga0137367_10830720	All Organisms → cellular organisms → Bacteria → Acidobacteria	640	Open in IMG/M
3300012381\|Ga0134026_1130601	Not Available	567	Open in IMG/M
3300012469\|Ga0150984_112004138	Not Available	563	Open in IMG/M
3300012685\|Ga0137397_10000108	All Organisms → cellular organisms → Bacteria	53514	Open in IMG/M
3300012918\|Ga0137396_10032292	All Organisms → cellular organisms → Bacteria	3476	Open in IMG/M
3300012922\|Ga0137394_10660670	All Organisms → cellular organisms → Bacteria → Acidobacteria	881	Open in IMG/M
3300012922\|Ga0137394_11113712	All Organisms → cellular organisms → Bacteria → Acidobacteria	653	Open in IMG/M
3300012948\|Ga0126375_10222991	All Organisms → cellular organisms → Bacteria	1256	Open in IMG/M
3300012948\|Ga0126375_10948454	All Organisms → cellular organisms → Bacteria → Acidobacteria	696	Open in IMG/M
3300012948\|Ga0126375_11294879	All Organisms → cellular organisms → Bacteria → Acidobacteria	612	Open in IMG/M
3300012948\|Ga0126375_11362076	All Organisms → cellular organisms → Bacteria → Acidobacteria	599	Open in IMG/M
3300012971\|Ga0126369_13456701	Not Available	517	Open in IMG/M
3300015053\|Ga0137405_1011061	All Organisms → cellular organisms → Bacteria → Acidobacteria	1847	Open in IMG/M
3300015245\|Ga0137409_10009880	All Organisms → cellular organisms → Bacteria	9668	Open in IMG/M
3300015359\|Ga0134085_10054930	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1598	Open in IMG/M
3300015359\|Ga0134085_10170464	All Organisms → cellular organisms → Bacteria → Acidobacteria	929	Open in IMG/M
3300015371\|Ga0132258_13233029	All Organisms → cellular organisms → Bacteria → Acidobacteria	1123	Open in IMG/M
3300015374\|Ga0132255_100897739	All Organisms → cellular organisms → Bacteria → Acidobacteria	1325	Open in IMG/M
3300016319\|Ga0182033_10940430	All Organisms → cellular organisms → Bacteria → Acidobacteria	767	Open in IMG/M
3300016357\|Ga0182032_10113181	All Organisms → cellular organisms → Bacteria	1942	Open in IMG/M
3300017654\|Ga0134069_1002879	All Organisms → cellular organisms → Bacteria	4704	Open in IMG/M
3300017656\|Ga0134112_10068805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1303	Open in IMG/M
3300017656\|Ga0134112_10252762	All Organisms → cellular organisms → Bacteria → Acidobacteria	700	Open in IMG/M
3300017657\|Ga0134074_1025205	All Organisms → cellular organisms → Bacteria	1974	Open in IMG/M
3300017657\|Ga0134074_1055574	All Organisms → cellular organisms → Bacteria → Proteobacteria	1340	Open in IMG/M
3300018081\|Ga0184625_10537791	All Organisms → cellular organisms → Bacteria → Acidobacteria	583	Open in IMG/M
3300018433\|Ga0066667_11595279	All Organisms → cellular organisms → Bacteria → Acidobacteria	581	Open in IMG/M
3300018468\|Ga0066662_10345066	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300018482\|Ga0066669_10949097	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300018482\|Ga0066669_12096131	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300019279\|Ga0184642_1031119	Not Available	572	Open in IMG/M
3300019279\|Ga0184642_1096827	All Organisms → cellular organisms → Bacteria → Acidobacteria	658	Open in IMG/M
3300019279\|Ga0184642_1471526	All Organisms → cellular organisms → Bacteria → Acidobacteria	703	Open in IMG/M
3300020170\|Ga0179594_10145356	All Organisms → cellular organisms → Bacteria → Acidobacteria	875	Open in IMG/M
3300022195\|Ga0222625_1218559	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300022195\|Ga0222625_1382564	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300025922\|Ga0207646_10000984	All Organisms → cellular organisms → Bacteria	36611	Open in IMG/M
3300026296\|Ga0209235_1027235	All Organisms → cellular organisms → Bacteria → Proteobacteria	2985	Open in IMG/M
3300026296\|Ga0209235_1135478	All Organisms → cellular organisms → Bacteria → Acidobacteria	1009	Open in IMG/M
3300026298\|Ga0209236_1016796	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4179	Open in IMG/M
3300026313\|Ga0209761_1009211	All Organisms → cellular organisms → Bacteria → Proteobacteria	6435	Open in IMG/M
3300026322\|Ga0209687_1027625	All Organisms → cellular organisms → Bacteria	1851	Open in IMG/M
3300026326\|Ga0209801_1209924	All Organisms → cellular organisms → Bacteria → Acidobacteria	771	Open in IMG/M
3300026328\|Ga0209802_1227004	All Organisms → cellular organisms → Bacteria → Acidobacteria	678	Open in IMG/M
3300026332\|Ga0209803_1027396	All Organisms → cellular organisms → Bacteria	2738	Open in IMG/M
3300027646\|Ga0209466_1055289	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300027835\|Ga0209515_10280085	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300027882\|Ga0209590_10434351	All Organisms → cellular organisms → Bacteria → Acidobacteria	848	Open in IMG/M
3300030993\|Ga0308190_1066303	All Organisms → cellular organisms → Bacteria → Proteobacteria	730	Open in IMG/M
3300031058\|Ga0308189_10059899	All Organisms → cellular organisms → Bacteria	1089	Open in IMG/M
3300031058\|Ga0308189_10298833	Not Available	629	Open in IMG/M
3300031093\|Ga0308197_10039968	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300031093\|Ga0308197_10300124	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300031716\|Ga0310813_10569874	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300031716\|Ga0310813_10985709	All Organisms → cellular organisms → Bacteria → Acidobacteria	768	Open in IMG/M
3300031820\|Ga0307473_10391374	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.08%
Host-Associated	Host-Associated	18.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.00%
Plants	Host-Associated → Plants	18.24%
Aquatic	Environmental → Aquatic	6.08%
Human	Host-Associated → Human	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.16%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.08%
Freshwater	Environmental → Aquatic → Freshwater	4.05%
Sediment	Environmental → Aquatic → Sediment	2.03%
Digestive System	Host-Associated → Human → Digestive System	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.49%
Loam	Environmental → Terrestrial → Soil → Loam	10.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.05%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.03%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.03%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.68%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.68%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	31.08%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.49%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.08%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.05%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.03%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.68%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.68%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	18.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	12.16%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.11%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.08%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.73%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.03%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.03%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.03%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.35%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.35%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.35%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.68%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.68%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.68%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.68%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.68%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012041	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT754_2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012381	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027835	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1052528121	3300000364	Soil	MAENSGNSSSSVAAVAIVVIIVLAIFAFYFLFARGVSAHRSIDIDIKTPSHTDV
AF_2010_repII_A1DRAFT_100187092	3300000597	Forest Soil	VASVAIVVIILLAIFAFYFLFGRGVHANKDINIDIKGPSQNMPVDKR*
JGI10216J12902_1026561232	3300000956	Soil	MGGNVAESSSSSVASVAIIVIILLAIFAFYFLFGRGVHAKRDINIDIKGPSQDMPVDKR*
JGI25385J37094_100854851	3300002558	Grasslands Soil	MAENSSSSVASVAIVVIILLAIFAFYFLFGRGVHAKRDINIDIKGPAHELPIDQR*
JGI25383J37093_101841352	3300002560	Grasslands Soil	MGDNSSSSVASVAIVVIILLAVFGFYMVFGRGVQAKKDIHIDIKPPGAIVLPIGGR*
JGI25384J37096_100771162	3300002561	Grasslands Soil	MAENSSSSVASVAIVVIILLASFAFYFLFGRGVHAKRDIHIDIKGPAHELPIDQR*
JGI25382J43887_100349933	3300002908	Grasslands Soil	MXENSXSSVASVAIVVIILLAIFAFYFLFGRGVHAKRDINIDIKGPAHELPIDQR*
soilL1_100973553	3300003267	Sugarcane Root And Bulk Soil	MAENSSSSVASVAIVVIIVLAIFAFYFYFGRGVHAQRSIDININRPSHDVPIDKR*
soilH2_101564883	3300003324	Sugarcane Root And Bulk Soil	MAENSSSSSVASVAIVVIILLAIFAFYFLFGRGVHAKRDINIDIKGPSHELPIDKR*
Ga0066397_100197262	3300004281	Tropical Forest Soil	MAENSSSSVASVAIVVIILLAIFAFYFLFGRGVQAKKDINIDIKGPSQNMPVDKR*
Ga0063356_1008514641	3300004463	Arabidopsis Thaliana Rhizosphere	MAENSENSSSSVASVAIVVIILLAIFAFYFLFSRGVSADKNIDIDIKTPKHIEVPINKR*
Ga0063356_1010633562	3300004463	Arabidopsis Thaliana Rhizosphere	MSENSSGSVASVAIVVIILLAIFAFYFMFGRGVQAKRTIDIDINTPKNEMPVHKR*
Ga0063356_1017316792	3300004463	Arabidopsis Thaliana Rhizosphere	MAENSGNSSSSVAAVAIVVIIVLAIFAFYFLFARGVSANKGINIDIKPPKNIEVPYDKR*
Ga0062595_1008129511	3300004479	Soil	FMKEDRMAENSGNSSSSVASVAIVVIIVLAIFAFYFLFTRGVSAHRNIDIDIKTPSHSDVPIDKR*
Ga0062592_1010912102	3300004480	Soil	MAENSGNSSSSVAAVAIVVIIVLAIFAFYFLFARGVSANKGINIDIKTPKHIEVPYDKR*
Ga0066395_101003982	3300004633	Tropical Forest Soil	MAENSSSSVASVAIVVIILLAIFAFYFLFGRGVHANKDINIDIKGPSQNMPVDKR*
Ga0058860_113735392	3300004801	Host-Associated	MSDNSSSSVASVAIVVVILLAVFAFYFLFVRGVSAKRDINIDIKTPHSETMPIQQR*
Ga0062594_1015020732	3300005093	Soil	MADNSGNSSSSVASVAIVVIIVLAIFAFYFLFARGVSANKGINIDIKTPKHIEVPLDKR*
Ga0066674_100132375	3300005166	Soil	NSSSSVASVAIVVIILLAIFAFYFLFGRAVHAKRDINIDIKGPAHELPIDQRFDNGNFPH
Ga0066674_102511612	3300005166	Soil	MTENSSSSVASVAIVVIILLAIFAFYFLFGRGVHAKRDINIDIKGPAHELPIDQR*
Ga0066677_101220332	3300005171	Soil	MSDNSSSSVASVAIVVIILLAIFAFYFLFGRSVHAKRDINIDIKGPEHSIPIDKR*
Ga0066690_102633072	3300005177	Soil	MAENSSSSVASVAIVVIILLATFAFYLLFGRSVHAKRDINIDIRGPAHEMPIDKR*
Ga0066685_102997113	3300005180	Soil	MAENSSSSVASVAIVVIILLAIFAFYFLFGRGVHAKRDINIDIKGPAHELPINQR*
Ga0066685_103570032	3300005180	Soil	MTVNSNSSVASVAIVVIILLAIFAFYFLFGRAVHAKRDINIDIKGPAHELPIDQRFDNGNFPH*
Ga0066685_108152243	3300005180	Soil	SNVASVAIVVIIVLAIFAFYFLFTRGVSANKGIDIDIKTPKHIEVPIDKR*
Ga0065715_110678831	3300005293	Miscanthus Rhizosphere	MAENSGNSSSDVASVAIVVIIVLAIFAFYFLFTRGVSANRGIDIDIKTPKHIEVPIDRR*
Ga0065707_105953411	3300005295	Switchgrass Rhizosphere	MSDNSSSSVASVAIVVVILLAVFAFYFLFVRGVSAKRDINIDIKTP
Ga0070690_1007946762	3300005330	Switchgrass Rhizosphere	MSDNSSSSVASVSIVVVILLAVFAFYFLFVRGVSAKRDINIDIKTPHSETMPIQQR*
Ga0066388_1000453865	3300005332	Tropical Forest Soil	MAENSGNSSSSVAAVAIVVIIVLAIFAFYFLFARGVSAHRSIDIDIKTPSHTDVPIDKR*
Ga0066388_1003653482	3300005332	Tropical Forest Soil	MSENSSSSVASVAIVVVILLAIFAFYFLFGRGVQAKRDINIDIKGPGSNQSTPYK*
Ga0066388_1030544323	3300005332	Tropical Forest Soil	MSDSSSSVASVAIVVIILLAVFAFYFLFARGGRGTKDINIDNRGPVPHAIPVFRR*
Ga0070708_1008729611	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSDNSSSSVASVAIVVIILLAIFAFYFLFGRSVHAKRDINIDIKGPEHSMPIDKR*
Ga0070708_1011391243	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAENSSSSVASVAIVVIILLAIFAFYFLFGRSVHAKRDINIDIKGPSHEMPIDKR*
Ga0066686_100740414	3300005446	Soil	MAENSSSSVASVAIVVIILLAIFAFYFLFARGVHAKRDINIDIKGPGQQMPIDKR*
Ga0066686_101745641	3300005446	Soil	ENSSSSVASVAIVVIILLAIFAFYFLFGRGVHAKRDINIDIKGPAHELPIDQR*
Ga0066689_108636032	3300005447	Soil	MTENSSSSVASVAIVVIILLAIFAFYFLLGRGVHAKRDINIDFKGPAHELPIDQR*
Ga0066681_103018002	3300005451	Soil	MSENSSSSVASVAIVVIILLAVFAFYFLFGRSVHANKDINIDIKGPTHQIPIDKR*
Ga0066681_105113741	3300005451	Soil	PFDRQFWQGGIMADNSSSSVASVAIVVIVLLAAFAFYFFFGRGVHANKDIHIDLKGPAHAIPIDQR*
Ga0070699_1021880341	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MAENSGDSSSSVASVAIVVIILLAIFAFYFLFGRGVSANKGINIDIQPPKHIEVPIDKR*
Ga0066701_103202342	3300005552	Soil	KMAENSSSSVASVAIVVIILLAIFAFYFLFGRGVHAKRDIHIDIKGPAHELPIDQR*
Ga0066695_105169432	3300005553	Soil	MAENSSSSVASVAIVVIILLAIFAFYFLFGRGVHAKRDIHIDIKGPAHELPIDQR*
Ga0066692_101107031	3300005555	Soil	SVASVAIVVIILLAIFAFYFLLGRGVHAKRDINIDIKGPAHELPIDQR*
Ga0066698_105018732	3300005558	Soil	MAENSSSSVASVAIVVIILLAIFAFYLLFGRGVHAKRGIDIDIHTPSKEIPFDKR*
Ga0066699_109806402	3300005561	Soil	MSDNSSSSVASVAIVVIILLAIFAFYFLFGRSVHANKNINIDIKAPTHEIPID
Ga0066699_110249282	3300005561	Soil	MAENESSSSVASVAIVVIILLAVFAFYFLFGRSVHANKDINIDIKGPAHEMPIDKR*
Ga0066706_105091394	3300005598	Soil	VASVAIVVIILLAIFAFYFLFGRGVHAKRDINIDIKGPAHELPIDQR*
Ga0066706_109109252	3300005598	Soil	MAENSGNSSSSVASVAIVVIIVLAIFAFYFLFTRGVSAHRGIDIDIKTPKHIEVPIDKR*
Ga0066905_1018010431	3300005713	Tropical Forest Soil	MAENSGNSSSSVASVAIVVIIVFAIFAFYFLFTRGVSANRGIDIDIKTPKHSEVPFDKR*
Ga0066903_1004134035	3300005764	Tropical Forest Soil	VAENSSASVASVAIVVIILLAIFAFYFLFARGVKAHREINVDIETPGHEVPIDKR*
Ga0066903_1042421822	3300005764	Tropical Forest Soil	MAENSSSSVASVAIVVIILLAIFAFYFLFARGVHAKRDINIDIKGPSQDLPINKR*
Ga0066652_1016513381	3300006046	Soil	SSVASVAIVVIILLAIFAFYFLFGRGVHAKRDINIDIKGPAHELPIDQR*
Ga0066658_102599462	3300006794	Soil	MKEDRMAENSGNSSSSVASVAIVVIIVLAIFAFYFLFTRGVSARRGIDIDIKTPKHIEVPIDKR*
Ga0066665_101688125	3300006796	Soil	SSSSVASVAIVVIILLAIFAFYFLFGRGVHAKRDINIDIKGPAHELPIDQR*
Ga0075428_1004022132	3300006844	Populus Rhizosphere	VAESSSSSVASVAIVVIILLAIFAFYFLFGRGVHAKRDINIDIKGPSQDMPVDKR*
Ga0075421_1006944032	3300006845	Populus Rhizosphere	VAESSSSSVASVAIIVIILLAIFAFYFLFGRGVHAKRDINIDIKGPSQDMPVDKR*
Ga0075433_118030992	3300006852	Populus Rhizosphere	MGEDSSSSVASVAIVVIIILAVFGFYLVFGRGVSAKRDINIDIKPPGAIVLPMGQW*
Ga0075420_1007832272	3300006853	Populus Rhizosphere	MSENSSSSVASVAIVVIILIALFAFYFIFSRGVQAKRDINIDIKGPSQEMPVDKR*
Ga0075425_1003892913	3300006854	Populus Rhizosphere	MSENPASSVASVAIVVIILLAIFAFYFLFGRGVQANREINIDINRPKHDVPNYKR*
Ga0075434_1005642473	3300006871	Populus Rhizosphere	MAENSSSSVASVAIVVIILLAIFAFYFLFARGVKAHREINVDIKTPGHEVPINKR*
Ga0075434_1016122173	3300006871	Populus Rhizosphere	ILKGGNMSENPASSVASVAIVVIILLAIFAFYFLFGRGVQANREINIDINRPKHDVPNYKR*
Ga0075429_1014319182	3300006880	Populus Rhizosphere	MGGNVAESSSSSVASVAIVVIILLAIFAFYFLFGRGVHAKRDINIDIKGPSQDMPVDKR*
Ga0075424_1009644661	3300006904	Populus Rhizosphere	MSEENSSSSVASVAIVVIILLAVFAFYFLFGRGVSAKHDINIDIKKPSQETPIDKR*
Ga0075424_1012671482	3300006904	Populus Rhizosphere	MPENSSSSVASVAIVVIILLAVFAFYFLFGRGVHAKRDINIDIKGPSHELPIDKR*
Ga0079218_116587892	3300007004	Agricultural Soil	MSENSSSSVASVAIVVIIMLAVFAFYFLFVRGVSAKRDINIDLKTPGVAIPLMFHQR*
Ga0075435_1017554642	3300007076	Populus Rhizosphere	MSENPASSVASVAIVVIILLAIFAFYFLFGRSVQANREINIDINRPKHDVPNYKR*
Ga0066710_1000117513	3300009012	Grasslands Soil	MAENSSSSVASVAIVVIILLAIFAFYFLFARGVHAKRDINIDIKGPGQQMPIDKR
Ga0066710_1008241852	3300009012	Grasslands Soil	MAENSSSSVASVAIVVIILLAVFAFYFLFGRGVHAQRDINIDIKGPSHEVPIGKR
Ga0066710_1022213622	3300009012	Grasslands Soil	VIIVLAIFAFYFLFTRGVSANKGIDIDIKTPKHIEVPIDKR
Ga0099827_107429681	3300009090	Vadose Zone Soil	MGDNSSSSVASVAIVVIILLAVFGFYMVFGRGVQAKRDIHIDIRPPGAIVLPIGGR*
Ga0075418_120371181	3300009100	Populus Rhizosphere	SSVASVAIVVIILLAIFAFYFLFGRGVHAKRDINIDIKGPSQDMPVDKR*
Ga0066709_1001335832	3300009137	Grasslands Soil	MKEDRMAENSGNSSSSVASVAIVVIIVLAIFAFYFLFTRGVSAHRGIDIDIKTPKHIEVPIDKR*
Ga0066709_1024969723	3300009137	Grasslands Soil	SSSSVASVAIVVIILLAIFAFYFLFGRAVHAKRDINIDIKGPTHELPIDPR*
Ga0066709_1039393112	3300009137	Grasslands Soil	DRQFWQGGIMADNSSSSVASVAIVVIVLLAAFAFYFFFGRGVHANKDIHIDLKGPAHAIPIDQR*
Ga0114129_1000903117	3300009147	Populus Rhizosphere	MKEDRMAENSGNSSSSVAAVAIVVIIVLAIFAFYFLFARGVSAHRSIDIDIKTPSHTDVPIDKR*
Ga0114129_102111712	3300009147	Populus Rhizosphere	MSENSSSSVASVAIVVVVLLAIFAFYFLFGRGVQAKRDINIDIKGPSQQSTPIDKR*
Ga0114129_103035502	3300009147	Populus Rhizosphere	VASVAIVVIILLAIFAFYFLFGRGVHAKRDINIDIKGPSQDMPVDKR*
Ga0111538_139694173	3300009156	Populus Rhizosphere	VIIVLAIFAFYFLFARGVSANKGINIDIKTPKHIEVPYDKR*
Ga0105248_114077541	3300009177	Switchgrass Rhizosphere	TVMAENSGNSSSSVASVAIVVIIVLAIFAFYFLFGRSVHANREINIDIHGPKHEVPINKR
Ga0126380_116450182	3300010043	Tropical Forest Soil	MGGMAENSSSSVASVANVVIILLAIFAFYFLFGRSVHAKRDINIDIKGPGQDMPVDKH*
Ga0134082_105531982	3300010303	Grasslands Soil	VGPTLNKAEEMMSDNSSSSVASVAIVVIILLAIFAFYFLFGRSVHAKKDINIDIKGPEHSIPIDKR*
Ga0126376_117567862	3300010359	Tropical Forest Soil	MSENPASSVASVAIVVIILLAIFAFYFLFGRSVHANREINIDIHGPQHEVPINPR*
Ga0126377_113898972	3300010362	Tropical Forest Soil	MSENSSSSVASVAIVVVILLAIFAFYFLFGRGVQAKRDINIEIKGPGSNQSTPYRNK*
Ga0126379_126387831	3300010366	Tropical Forest Soil	MKEDRMAENSGNSSSSVASVAIVVIIVLAIFAFYFLFTRGVSANRGIDINIKTPKHIEVPIDKR*
Ga0126383_132208412	3300010398	Tropical Forest Soil	AFSAVNSNREEKMAENSSSSVASVAIVVIILLAIFAFYFLFGRGVHAKRDINIDIKGPSHELPIDER*
Ga0134121_118469892	3300010401	Terrestrial Soil	MSDNSSSSVASVAIVVVILLAVFAFYFLFVRGVSAKRDINIDIKTPHSETMPIQ
Ga0137430_11953921	3300012041	Soil	LERQCGFSVAIVVIIMLAIFAFYFLFIRGAQAKRTIDIDINTPKNEMPVHQR*
Ga0137364_103784382	3300012198	Vadose Zone Soil	MAENDSSSSVASVAIVVIILLAVFAFYFLFGRSVHANKDINIDIKGPSHEMPIDKR*
Ga0137380_111370312	3300012206	Vadose Zone Soil	EEKMAENSSSSVASVAIVVIILLAIFAFYFLFGRGVHAKRDIHIDIKGPAHELPIDQR*
Ga0150985_1072597581	3300012212	Avena Fatua Rhizosphere	VMAENSGNSSSSVASVAIVVIIVLAIFAFYFLFTRGVSANKGIDIDIKTPKHIEVPFDKR
Ga0150985_1140933942	3300012212	Avena Fatua Rhizosphere	ADNSSSSVASVAIVVIILLAIFAFYFLFGRSVHAKRDINIDIKGPSHELPIDKR*
Ga0150985_1188989451	3300012212	Avena Fatua Rhizosphere	MKEEFMAENSGNSSSSVASVAIVVIVVVAIFAFYFLFTRGVSAHKGIDIDIKPPKHIEVPIDRR*
Ga0137367_108307201	3300012353	Vadose Zone Soil	MGGNMAENSSSSVASVAIVIIILLAIFAYYFLFGRGVHAKRDINIDIKGPSQDMPVDKR*
Ga0134026_11306011	3300012381	Grasslands Soil	MADNSSSSVASVAIVVIVLLAAFAFYFFFGRGVHANKDIHIDLKGPAHAIPIDQR*
Ga0150984_1120041381	3300012469	Avena Fatua Rhizosphere	MADNSSSSVASVAIVVIILLAIFAFYFLFGRSVHAKRDINIDIKGPSHELPIDKR*
Ga0137397_1000010811	3300012685	Vadose Zone Soil	MGDNSSSSVASVAIVVIILLAVFGFYMVFGRGVQAKKDIHIDIKPPGAIVLPMGQR*
Ga0137396_100322924	3300012918	Vadose Zone Soil	VASVAIVVIILLAVFGFYMVFGRGVQAKKDIHIDIKPPGAIVLPIGGR*
Ga0137394_106606701	3300012922	Vadose Zone Soil	MAENSSSSVASVAIVVIILLAIFAFYFLFGRGVQAKRDINIDIKGPSHELPIDKR*
Ga0137394_111137121	3300012922	Vadose Zone Soil	MGEDSSSSVASVAIVVIILIAVFGFYLVFGRGVQAKKDIHIEIKPPGAIVLPIGQW*
Ga0126375_102229911	3300012948	Tropical Forest Soil	NANREGKMAENSSSSVASVAIVVIILLAIFAFYFLFARGVKAHREINVDIKTPGHEVPVDKR*
Ga0126375_109484541	3300012948	Tropical Forest Soil	MSENSSSSVASVAIVVVILLAIFAFYFLFGRGVQAKRDINIDIKRPSHDMPIDKR*
Ga0126375_112948792	3300012948	Tropical Forest Soil	MSENPASSVASVAIVVIILLAIFAFYFLFGRSVHANREINIDISGPKHERPITPR*
Ga0126375_113620762	3300012948	Tropical Forest Soil	MKEDGMAENSGNSTSSVASVAIVVIIVLAIFAFYFLFTRGVSAHRSIDIDIKTPSHNEVPIDKR*
Ga0126369_134567011	3300012971	Tropical Forest Soil	EERMSDNSSSSVASVAIVVIILLAIFAFYFLFGRSVHAKRDINIDIKTPSQELPIDKR*
Ga0137405_10110612	3300015053	Vadose Zone Soil	MGDNSSSSVASVAIVVIILLAVFGFYMVFGRGVQAKKDIHIDIKPPGAIVLPIGDR*
Ga0137409_1000988013	3300015245	Vadose Zone Soil	MGDNSSSSVASVAIVVIILLAVFGFYMVFGRGVQAKKDIHIDIKPPGAIVLPMGGR*
Ga0134085_100549301	3300015359	Grasslands Soil	NSNREEKMTENSSSSVASVAIVVIILLAIFAFYFLFGRGVHAKRDINIDIKGPAHELPIDQR*
Ga0134085_101704643	3300015359	Grasslands Soil	EEKMTENSSSSVASVAIVVIILLAIFAFYFLFGRAVHAKRDINIDIKGPAHELPIDQRFDNGNFPH*
Ga0132258_132330291	3300015371	Arabidopsis Rhizosphere	MAENSGNSSSSVASVAIVVIIVLAIFAFYFFFARGVSAHRGIDINIKTPSHTDIPIDKR*
Ga0132255_1008977393	3300015374	Arabidopsis Rhizosphere	MAENSGNSSSNVASVAIVVIIVLAIFAFYFLFTRGVSANRGINIDIKTPKHSEVPFDKW*
Ga0182033_109404302	3300016319	Soil	MSENPASSVASVAIVVIILLAIFAFYFLFGRSVHANREINIDIHGPQ
Ga0182032_101131811	3300016357	Soil	MSENPASSVASVAIVVIILLAIFAFYFLFGRSVHADREINIDIHGPQHEVPINPR
Ga0134069_10028792	3300017654	Grasslands Soil	MAENSSSSVASVAIVVIILLAIFAFYFLFGRGVHAKRDINIDIKGPAHELPIDQR
Ga0134112_100688054	3300017656	Grasslands Soil	SSSSVASVAIVVIILLAIFAFYFLFGRGVHAKRDINIDIKGPAHELPIDQR
Ga0134112_102527622	3300017656	Grasslands Soil	MAENSSSSVASVAIVVIILLAIFAFYFLFGRGVHAKRDINIDIKGPAHELPINQR
Ga0134074_10252053	3300017657	Grasslands Soil	MTDNSSSSVASVAIVVIILLAIFAFYFLFGRAVHAKRDINIDIKGPAHELPIDQR
Ga0134074_10555741	3300017657	Grasslands Soil	SSSVASVAIVVIILLAIFAFYFLFGRGVHAKRDINIDIKGPAHELPIDQR
Ga0184625_105377911	3300018081	Groundwater Sediment	MAENSGNSSSSVASVAIVVIIVLAIFAFYFLFARGVSANKGINIDIKTPKHIEVPIDKR
Ga0184628_105431802	3300018083	Groundwater Sediment	VIIVLAIFAFYFLFTRGVSANKSIDIDIKTPKHIEVPINKR
Ga0066667_115952792	3300018433	Grasslands Soil	MAANSSSSVASVAIVVIILLAIFAFYFLFGRAVHAKRDINIDIKGPAHELPIDQR
Ga0066662_103450662	3300018468	Grasslands Soil	MGDNSSNSVASVAIVVIILLAVFGFYMVFGRRVQAKKDIHIDIKPPGAIVLPIGGR
Ga0066669_109490973	3300018482	Grasslands Soil	MAENDSSSSVASVAIVVIILLAVFAFYFLFGRSVHANKDINIDIKGPSHEMPNDKRSRRPCL
Ga0066669_120961312	3300018482	Grasslands Soil	MSENSSSSVASVAIVVIILLAIFAFYFLFGRSVHANKDINIDIKGPTHQIPIDKR
Ga0184642_10311192	3300019279	Groundwater Sediment	GNMAENSSSSVASVAIVVIILLGVFAFYFLFGRGVHAQRDINIDIKGPRHEVPIDKR
Ga0184642_10968271	3300019279	Groundwater Sediment	MSENSSNNVASVAIVVIIVLAIFAFYFLFGRGVSANKGINIDIKVPDKIDKPFDKR
Ga0184642_14715262	3300019279	Groundwater Sediment	MAENSGNSSSSVASVAIVVIIVLAIFAFYFLFTRGVSAHRGIDIDIKTPKHIEVPIDKR
Ga0179594_101453562	3300020170	Vadose Zone Soil	MGDNSSSSVASVAIVVIILLAVFGFYMVFGRGVQAKKDIHIDIKPPG
Ga0222625_12185591	3300022195	Groundwater Sediment	MAENSSSSVASVAIVVIILLGVFAFYFLFGRGVHAQRDINIDIKGPRHEVPIDKR
Ga0222625_13825641	3300022195	Groundwater Sediment	MADNSSSSVASVAIVVIVLFAAFAFYFFFGRGVHANKDIHIDLKGPAHAIPIDQR
Ga0207646_1000098427	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSDNSSSSVASVAIVVIILLAIFAFYFLFGRSVHAKRDINIDIKGPEHSMPIDKR
Ga0209235_10272353	3300026296	Grasslands Soil	MAENSSSSVASVAIVVIILLAIFAFYFLFGRGVHAKRDIHIDIKGPAHELPIDQR
Ga0209235_11354782	3300026296	Grasslands Soil	MGDNSSSSVASVAIVVIILLAVFGFYMVFGRGVQAKKDIHIDIKPPGAI
Ga0209236_10167961	3300026298	Grasslands Soil	MTENSSSSVASVAIVVIILLAIFAFYFLFGRGVHAKRDINIDIKGPAHELPIDQR
Ga0209761_10092115	3300026313	Grasslands Soil	MAENSSSSVASVAIVVIILLASFAFYFLFGRGVHAKRDIHIDIKGPAHELPIDQR
Ga0209687_10276252	3300026322	Soil	MSDNSSSSVASVAIVVIILLAIFAFYFLFGRSVHAKRDINIDIKGPEHSIPIDKR
Ga0209801_12099242	3300026326	Soil	MGDNSSSSVASVAIVVIILLAVFGFYMVFGRGVQAKKDIHIDIKPPGAIVLPIGGR
Ga0209802_12270041	3300026328	Soil	MTENSSSSVASVAIVVIILLAIFAFYFLLGRGVHAKRDINIDIKGPAHELPIDQR
Ga0209803_10273963	3300026332	Soil	MAENSSSSVASVAIVVIILLAIFAFYFLFGRGVHAKRDINIDFKGPAHELPIDQR
Ga0209466_10552892	3300027646	Tropical Forest Soil	MAENSSSSVASVAIVVIILLAIFAFYFLFGRGVQAKKDINIDIKGPSQNMPVDKR
Ga0209515_102800852	3300027835	Groundwater	MAENDSSSSVASVAIVVIILLAIFAFYFLFGRGVHAQKDINIDIKGPSHEIPIDKR
Ga0209590_104343512	3300027882	Vadose Zone Soil	MGDNSSSSVASVAIVVIILLAVFGFYMVFGRGVQAKRDIHIDIKPPGAIVLPIGGR
Ga0308190_10663032	3300030993	Soil	MSDSSSSVASVAIVVIVLLAAFAFYFFFGRGVHADKGIHIDLKGPSHAIPIGQR
Ga0308189_100598992	3300031058	Soil	MSDSSSSVASVAIVVIVVLAAFAFYFFFGRGVHADKGIHIDLKGPSHAIPIGQR
Ga0308189_102988331	3300031058	Soil	MADNSSSSVASVAIVVIILLAVFAFYFLFARGVSAKRDINIDIKNPVKEMPLDKR
Ga0308197_100399682	3300031093	Soil	MSDSSSSVASVAIVVIVLLAAFAYYFFFGRGVHSDKGIHNDLKGPSHAIPIGQR
Ga0308197_103001242	3300031093	Soil	MAENSDNSSSSVASVAIVVIIVLAIFAFYFLFARGVSANKGINIDIKTPKHIEVPIDKR
Ga0310813_105698742	3300031716	Soil	MSENPASSVASVAIVVIILLAIFAFYFLFGRSVQANREINIDLNRPKHDVPNYKR
Ga0310813_109857092	3300031716	Soil	MAENSGNSSSNVASVAIVVIIVLAIFAFYFLFTRGVSANRGIDIDIKTPKHIEVPIDRR
Ga0307473_103913743	3300031820	Hardwood Forest Soil	SDNSSSSVASVAIVVIILLAIFAFYFLFGRSVHAKRDINIDIKGPEHSIPIDKR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F048201

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences