Metagenome Family F048379

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F048379
Family Type	Metagenome
Number of Sequences	148
Average Sequence Length	81 residues
Representative Sequence	MKRIVILIVLVAIAGVAGVVRSSVKSVSELRGLVSHRNTADVRQEIRQSYELSPGARVELVGLNGAVKIETSDTKTAEI
Number of Associated Samples	107
Number of Associated Scaffolds	148

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.96 %
% of genes near scaffold ends (potentially truncated)	98.65 %
% of genes from short scaffolds (< 2000 bps)	93.24 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.135 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere (14.865 % of family members)
Environment Ontology (ENVO)	Unclassified (54.054 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (71.622 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 33.64% β-sheet: 0.00% Coil/Unstructured: 66.36%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 148 Family Scaffolds
PF00072	Response_reg	75.68
PF01928	CYTH	3.38
PF12698	ABC2_membrane_3	2.70
PF00665	rve	0.68
PF14559	TPR_19	0.68
PF00583	Acetyltransf_1	0.68
PF13732	DUF4162	0.68

COG ID	Name	Functional Category	% Frequency in 148 Family Scaffolds
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.68
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.68
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.68
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.14 %
Unclassified	root	N/A	14.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.14 %
Unclassified	root	N/A	14.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.14 %
Unclassified	root	N/A	14.86 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	52.70 %
Unclassified	root	N/A	14.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.03 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.86 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.41 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	2.70 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.03 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.41 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	2.70 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.35 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.68 %
Vibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.41 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	2.70 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.35 %
Vibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae	0.68 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.41 %
Pyrinomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	2.03 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.35 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	0.68 %
Photobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Photobacterium	0.68 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.41 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	2.03 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.35 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.68 %
Photobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Photobacterium	0.68 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886006\|SwRhRL3b_contig_3119416	All Organisms → cellular organisms → Bacteria → Acidobacteria	845	Open in IMG/M
3300000953\|JGI11615J12901_10059740	All Organisms → cellular organisms → Bacteria → Acidobacteria	615	Open in IMG/M
3300001990\|JGI24737J22298_10196537	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300003321\|soilH1_10007118	All Organisms → cellular organisms → Bacteria	8717	Open in IMG/M
3300004081\|Ga0063454_101335757	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300004114\|Ga0062593_100434281	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300004463\|Ga0063356_100673380	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300004479\|Ga0062595_100804013	All Organisms → cellular organisms → Bacteria → Acidobacteria	775	Open in IMG/M
3300004480\|Ga0062592_100737053	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300004480\|Ga0062592_101555130	All Organisms → cellular organisms → Bacteria → Acidobacteria	637	Open in IMG/M
3300005093\|Ga0062594_100178169	All Organisms → cellular organisms → Bacteria	1444	Open in IMG/M
3300005093\|Ga0062594_101839422	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300005290\|Ga0065712_10298591	All Organisms → cellular organisms → Bacteria → Acidobacteria	848	Open in IMG/M
3300005290\|Ga0065712_10814198	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	508	Open in IMG/M
3300005330\|Ga0070690_101465567	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300005331\|Ga0070670_101202345	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300005334\|Ga0068869_101234761	Not Available	658	Open in IMG/M
3300005343\|Ga0070687_100216520	All Organisms → cellular organisms → Bacteria → Proteobacteria	1170	Open in IMG/M
3300005343\|Ga0070687_100427156	All Organisms → cellular organisms → Bacteria → Acidobacteria	875	Open in IMG/M
3300005343\|Ga0070687_101307502	All Organisms → cellular organisms → Bacteria → Acidobacteria	539	Open in IMG/M
3300005406\|Ga0070703_10079014	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300005441\|Ga0070700_100735225	All Organisms → cellular organisms → Bacteria → Acidobacteria	788	Open in IMG/M
3300005441\|Ga0070700_101162784	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300005459\|Ga0068867_101822167	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300005468\|Ga0070707_100205247	All Organisms → cellular organisms → Bacteria	1921	Open in IMG/M
3300005530\|Ga0070679_100240886	All Organisms → cellular organisms → Bacteria	1766	Open in IMG/M
3300005539\|Ga0068853_101738231	Not Available	605	Open in IMG/M
3300005544\|Ga0070686_101507946	All Organisms → cellular organisms → Bacteria → Acidobacteria	567	Open in IMG/M
3300005546\|Ga0070696_100930307	All Organisms → cellular organisms → Bacteria → Acidobacteria	723	Open in IMG/M
3300005546\|Ga0070696_101320034	All Organisms → cellular organisms → Bacteria → Acidobacteria	613	Open in IMG/M
3300005547\|Ga0070693_100686706	All Organisms → cellular organisms → Bacteria → Acidobacteria	748	Open in IMG/M
3300005547\|Ga0070693_101513747	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	525	Open in IMG/M
3300005549\|Ga0070704_100176250	All Organisms → cellular organisms → Bacteria	1706	Open in IMG/M
3300005615\|Ga0070702_100950753	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300005617\|Ga0068859_100321745	All Organisms → cellular organisms → Bacteria → Acidobacteria	1641	Open in IMG/M
3300005617\|Ga0068859_102290951	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300005618\|Ga0068864_100242169	All Organisms → cellular organisms → Bacteria	1671	Open in IMG/M
3300005618\|Ga0068864_100634129	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300005618\|Ga0068864_101552550	All Organisms → cellular organisms → Bacteria → Acidobacteria	665	Open in IMG/M
3300005618\|Ga0068864_101845300	All Organisms → cellular organisms → Bacteria → Proteobacteria	610	Open in IMG/M
3300005719\|Ga0068861_101023961	All Organisms → cellular organisms → Bacteria → Acidobacteria	789	Open in IMG/M
3300005719\|Ga0068861_101953660	Not Available	584	Open in IMG/M
3300005840\|Ga0068870_10993133	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300005841\|Ga0068863_101758836	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300005842\|Ga0068858_100162268	All Organisms → cellular organisms → Bacteria	2104	Open in IMG/M
3300005876\|Ga0075300_1022746	All Organisms → cellular organisms → Bacteria → Acidobacteria	802	Open in IMG/M
3300006049\|Ga0075417_10720002	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300006237\|Ga0097621_100416244	All Organisms → cellular organisms → Bacteria	1205	Open in IMG/M
3300006755\|Ga0079222_10008786	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3565	Open in IMG/M
3300006755\|Ga0079222_10891363	All Organisms → cellular organisms → Bacteria → Acidobacteria	744	Open in IMG/M
3300006845\|Ga0075421_102083041	Not Available	602	Open in IMG/M
3300006847\|Ga0075431_101654927	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300006853\|Ga0075420_101657601	Not Available	548	Open in IMG/M
3300006854\|Ga0075425_102982045	Not Available	518	Open in IMG/M
3300009011\|Ga0105251_10279260	All Organisms → cellular organisms → Bacteria → Acidobacteria	755	Open in IMG/M
3300009011\|Ga0105251_10538316	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300009098\|Ga0105245_12390817	Not Available	582	Open in IMG/M
3300009148\|Ga0105243_12665362	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300009162\|Ga0075423_12179111	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300009174\|Ga0105241_10092968	All Organisms → cellular organisms → Bacteria	2383	Open in IMG/M
3300009174\|Ga0105241_10511768	All Organisms → cellular organisms → Bacteria → Acidobacteria	1072	Open in IMG/M
3300009174\|Ga0105241_10711781	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300009176\|Ga0105242_11252743	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300009177\|Ga0105248_13214617	Not Available	520	Open in IMG/M
3300009545\|Ga0105237_10988699	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	848	Open in IMG/M
3300009551\|Ga0105238_12544632	Not Available	548	Open in IMG/M
3300009789\|Ga0126307_10684139	All Organisms → cellular organisms → Bacteria → Acidobacteria	828	Open in IMG/M
3300010036\|Ga0126305_10611261	All Organisms → cellular organisms → Bacteria → Acidobacteria	733	Open in IMG/M
3300010037\|Ga0126304_10050648	All Organisms → cellular organisms → Bacteria	2521	Open in IMG/M
3300010040\|Ga0126308_10678508	All Organisms → cellular organisms → Bacteria → Acidobacteria	707	Open in IMG/M
3300010040\|Ga0126308_10763633	All Organisms → cellular organisms → Bacteria → Acidobacteria	668	Open in IMG/M
3300010045\|Ga0126311_10910779	All Organisms → cellular organisms → Bacteria → Acidobacteria	714	Open in IMG/M
3300010166\|Ga0126306_10414692	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300010397\|Ga0134124_12453240	Not Available	563	Open in IMG/M
3300010399\|Ga0134127_10959183	All Organisms → cellular organisms → Bacteria → Acidobacteria	913	Open in IMG/M
3300010399\|Ga0134127_10975476	Not Available	906	Open in IMG/M
3300010399\|Ga0134127_13513542	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300010399\|Ga0134127_13703495	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300010400\|Ga0134122_10297394	All Organisms → cellular organisms → Bacteria	1384	Open in IMG/M
3300010400\|Ga0134122_12549660	Not Available	561	Open in IMG/M
3300011119\|Ga0105246_10110422	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	2019	Open in IMG/M
3300012957\|Ga0164303_10232174	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300012989\|Ga0164305_12111858	Not Available	516	Open in IMG/M
3300013100\|Ga0157373_10181370	All Organisms → cellular organisms → Bacteria	1482	Open in IMG/M
3300013102\|Ga0157371_10320236	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300013297\|Ga0157378_12717586	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300013306\|Ga0163162_11098092	All Organisms → cellular organisms → Bacteria → Acidobacteria	901	Open in IMG/M
3300013307\|Ga0157372_13046368	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M
3300014263\|Ga0075324_1005072	All Organisms → cellular organisms → Bacteria	1997	Open in IMG/M
3300014296\|Ga0075344_1059923	Not Available	705	Open in IMG/M
3300014325\|Ga0163163_12759093	All Organisms → cellular organisms → Bacteria → Acidobacteria	548	Open in IMG/M
3300014326\|Ga0157380_10691676	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300014745\|Ga0157377_10163089	All Organisms → cellular organisms → Bacteria	1388	Open in IMG/M
3300014745\|Ga0157377_10538912	All Organisms → cellular organisms → Bacteria → Acidobacteria	822	Open in IMG/M
3300014968\|Ga0157379_10620753	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300014968\|Ga0157379_11710589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Photobacterium	616	Open in IMG/M
3300015374\|Ga0132255_100275922	All Organisms → cellular organisms → Bacteria	2411	Open in IMG/M
3300018476\|Ga0190274_10770466	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300018482\|Ga0066669_12110595	All Organisms → cellular organisms → Bacteria → Acidobacteria	532	Open in IMG/M
3300021445\|Ga0182009_10094691	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1352	Open in IMG/M
3300021445\|Ga0182009_10829860	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300025901\|Ga0207688_10916390	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300025908\|Ga0207643_10437951	All Organisms → cellular organisms → Bacteria → Acidobacteria	830	Open in IMG/M
3300025908\|Ga0207643_10764137	Not Available	626	Open in IMG/M
3300025911\|Ga0207654_11228389	Not Available	546	Open in IMG/M
3300025918\|Ga0207662_10056362	All Organisms → cellular organisms → Bacteria	2347	Open in IMG/M
3300025919\|Ga0207657_10609809	All Organisms → cellular organisms → Bacteria → Acidobacteria	851	Open in IMG/M
3300025921\|Ga0207652_10210042	All Organisms → cellular organisms → Bacteria	1753	Open in IMG/M
3300025927\|Ga0207687_11814646	Not Available	522	Open in IMG/M
3300025930\|Ga0207701_10375534	All Organisms → cellular organisms → Bacteria	1227	Open in IMG/M
3300025930\|Ga0207701_10542195	All Organisms → cellular organisms → Bacteria → Acidobacteria	993	Open in IMG/M
3300025939\|Ga0207665_10911939	All Organisms → cellular organisms → Bacteria → Acidobacteria	697	Open in IMG/M
3300025941\|Ga0207711_10613622	All Organisms → cellular organisms → Bacteria → Acidobacteria	1015	Open in IMG/M
3300025941\|Ga0207711_11442375	All Organisms → cellular organisms → Bacteria → Acidobacteria	631	Open in IMG/M
3300025942\|Ga0207689_10557022	All Organisms → cellular organisms → Bacteria → Acidobacteria	963	Open in IMG/M
3300025942\|Ga0207689_11435911	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
3300025945\|Ga0207679_11401738	Not Available	641	Open in IMG/M
3300025960\|Ga0207651_12015439	Not Available	519	Open in IMG/M
3300025960\|Ga0207651_12021734	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300025981\|Ga0207640_11545783	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300026041\|Ga0207639_10803747	All Organisms → cellular organisms → Bacteria → Acidobacteria	876	Open in IMG/M
3300026046\|Ga0208780_1018685	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300026088\|Ga0207641_10626950	All Organisms → cellular organisms → Bacteria → Acidobacteria	1055	Open in IMG/M
3300026088\|Ga0207641_10750671	All Organisms → cellular organisms → Bacteria → Acidobacteria	963	Open in IMG/M
3300026088\|Ga0207641_12633583	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	501	Open in IMG/M
3300026095\|Ga0207676_11356258	All Organisms → cellular organisms → Bacteria → Acidobacteria	707	Open in IMG/M
3300026095\|Ga0207676_11677647	All Organisms → cellular organisms → Bacteria → Acidobacteria	634	Open in IMG/M
3300026116\|Ga0207674_11287021	All Organisms → cellular organisms → Bacteria → Acidobacteria	701	Open in IMG/M
3300026118\|Ga0207675_100883879	All Organisms → cellular organisms → Bacteria → Acidobacteria	909	Open in IMG/M
3300026118\|Ga0207675_101258806	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	760	Open in IMG/M
3300026118\|Ga0207675_102060204	All Organisms → cellular organisms → Bacteria → Acidobacteria	587	Open in IMG/M
3300026142\|Ga0207698_11231623	All Organisms → cellular organisms → Bacteria → Acidobacteria	763	Open in IMG/M
3300026142\|Ga0207698_11261367	All Organisms → cellular organisms → Bacteria → Acidobacteria	753	Open in IMG/M
3300026142\|Ga0207698_12073184	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300026312\|Ga0209153_1026386	All Organisms → cellular organisms → Bacteria → Acidobacteria	1954	Open in IMG/M
3300028380\|Ga0268265_12391982	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M
3300028381\|Ga0268264_10321083	All Organisms → cellular organisms → Bacteria	1464	Open in IMG/M
3300028381\|Ga0268264_10817638	All Organisms → cellular organisms → Bacteria → Acidobacteria	932	Open in IMG/M
3300028381\|Ga0268264_11324046	All Organisms → cellular organisms → Bacteria → Acidobacteria	730	Open in IMG/M
3300030511\|Ga0268241_10194238	Not Available	513	Open in IMG/M
3300031716\|Ga0310813_10521608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1041	Open in IMG/M
3300031731\|Ga0307405_10577242	All Organisms → cellular organisms → Bacteria → Acidobacteria	914	Open in IMG/M
3300032075\|Ga0310890_11747158	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300032421\|Ga0310812_10156871	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300033412\|Ga0310810_10427985	All Organisms → cellular organisms → Bacteria	1352	Open in IMG/M
3300033412\|Ga0310810_11340509	Not Available	557	Open in IMG/M
3300033475\|Ga0310811_10167449	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	2739	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	55.41%
Environmental	Environmental	44.59%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	55.41%
Terrestrial	Environmental → Terrestrial	44.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	44.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	29.05%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.00%
Roots	Host-Associated → Plants → Roots	1.35%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	28.38%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	27.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.62%
Loam	Environmental → Terrestrial → Soil → Loam	13.51%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.03%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.35%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	27.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.24%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.84%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.08%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.38%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.03%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.35%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.68%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.68%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	14.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.41%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	5.41%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.41%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.05%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.05%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.05%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.05%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.03%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.03%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.03%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.03%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.03%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.35%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.35%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.35%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.35%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.35%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.68%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.68%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886006	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300001990	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3	Host-Associated	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005876	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_401	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014263	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D1	Environmental	Open in IMG/M
3300014296	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026046	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D1 (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030511	Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SwRhRL3b_0818.00000370	2162886006	Switchgrass Rhizosphere	MKRILILVLLVAIAAVAGAVRSSVGSVSELRELVSHQNTGDVRQEIRETYQLSPGARVELSGLNGSVKIETSDSK
JGI11615J12901_100597401	3300000953	Soil	MKRIVIFVVLVLLAGVAGVVVRSASRGTVAEIRELVTHHNTDVREQIRQSYNLSPGARVELTGLNGAVNI
JGI24737J22298_101965372	3300001990	Corn Rhizosphere	MKRIVILVLLVAIAAVAGAVRSSVGSVSELRELVSHQNTGSVRQEIRETYQLSPGARVELAGLNGSVKIETSDSKTA
soilH1_100071183	3300003321	Sugarcane Root And Bulk Soil	MKRIVILIVLVAIAGVAGIVRSSVGSVAELRQLASHRNVADVRQEIRESYELAPGARVELSGLNG
Ga0063454_1013357572	3300004081	Soil	MKRIVILIVLVVIAGVAGVVRSSVGSVSELRGLVSHHNAADVRQEIRQTYELAPGARVEIAGLNGAVKIE
Ga0062593_1004342811	3300004114	Soil	MKRIVILIVLVTIAAVAGVVRSSVGSVSELRGLVSHRNAADVRQEIRQTYELAPGARVEITGLNGAVKIE
Ga0063356_1006733803	3300004463	Arabidopsis Thaliana Rhizosphere	MKRIVILILLVVVAGVAGVVVRSSSGSGTVSEIRGLVSSQNASGDVRDEMRQTYELAPGARVEVGGINGPLKIETADT
Ga0062595_1008040132	3300004479	Soil	MKRIVVLVLLVAIAAVAGAVRSSVGSVSELRELVSHQNTGNVRQEIRETYELAPGARVELSGLNGSVKIETSDSKTAEVYIERTASTQDAMDRRKVTIVGDPNSL
Ga0062592_1007370531	3300004480	Soil	MKRIVIFVVLVLLAGIAGVVVRSASRGTVAEIRELVTHHNTDVREQIRQSYELSPGARVELTGLNGA
Ga0062592_1015551302	3300004480	Soil	MKRIVILIVLVAIAAVAGVVRSSVGSVSELRGLVSHKNAADVRQEIRQTYELAPGARVEIAGLNGAVKIETSD
Ga0062594_1001781691	3300005093	Soil	MKRIVILIVLVALAAVAGVVRSSVGSVAELREIVSHKNAADVRQEIRQSYELTPGARVDLSGLNGAVKIETSDSKTAEIYIERTASCQEAMDRRKVTIEADANSLR
Ga0062594_1018394222	3300005093	Soil	MKRIVILVLLVTVAGVAGVVVRSSSCSVAELRGLVSHQNAADVRQEIRKSFELSPGARVELTG
Ga0065712_102985912	3300005290	Miscanthus Rhizosphere	MKRIVILVLLVTIAAVAGVVRSSVGSVAELRGLVSHRNAADVRHEIRQTHELSPGARVELSGLNGAVRI
Ga0065712_108141981	3300005290	Miscanthus Rhizosphere	MSLKRPSIHFYPFEAGNMKRIVILVLLVAIAAVAGAVRSSVGSVSELRGLVSHQNTGDVRQEIRESYQLSPGARVELSGLNGNVNIETSDRKAAEVYIERTASTQDAMD
Ga0070690_1014655672	3300005330	Switchgrass Rhizosphere	MKRIVIVILLVAIAGVAGVVRSSVGSVAELRGLVSHKNAADVRQEIRQTYELAPGARVELSGLNGAVKIETSDTKTAEIYI
Ga0070670_1012023452	3300005331	Switchgrass Rhizosphere	MKRIVILVVLVAIAAVAGAVRSSVGSVSELRGLVSHQNTGDVRQEIRETYELAPGARVELSGLNGSVKIETSDSKTAEVYIERTASTQDAMDR
Ga0068869_1012347612	3300005334	Miscanthus Rhizosphere	MKRIVILIVLVAIAGVAGIVRSSVGSVAELRQLASHRNAADVRQEIRQSYELAPGARVELSGLNGAVKIETSDSKTAEIYIERTASCQEAMDRRKVTIEADANSLRIRGEKSDD
Ga0070687_1002165201	3300005343	Switchgrass Rhizosphere	MKRIVILIVLVVIAGVAGVVRTSVGSVSELRGLVSHKNSADVRQEIRQTYELAPGARVEITGLNGAVKIETSDSKTAEIY
Ga0070687_1004271561	3300005343	Switchgrass Rhizosphere	MKRIVILIVLVAIAGVAGVVRSSVKSVSELRGLVSHRNTADVRQEIRQSYELAPGARVEIVGLNGAVKIETSDTKTAEIYIERTASCQEALD
Ga0070687_1013075021	3300005343	Switchgrass Rhizosphere	MKRIVIVILLVAIAGVAGVVRSSVGSVAELRGLVSHKNAADVRQEIRQTYELAPGARVELSGLNGAVKIE
Ga0070703_100790143	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MKRLVIFILLVLLAAIAGVVARSSSRGDLRDLVSHHASADVRQEIRQSYELSPGARVELSGLNGGVK
Ga0070700_1007352251	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MKRIVILVVLVAIAAVAGAVRSSVGSVSELRGLVSHQNTGDVRQEIRETYELAPGARVELAGLNGSVKI
Ga0070700_1011627842	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MKRIVILVLLVAIAAVAGAVRSSVGSVSELRELVSHQNTGSVRQEIRETYQLSPGARVELAGLNGSVKIET
Ga0068867_1018221672	3300005459	Miscanthus Rhizosphere	MKRIVILIVLVAIAGVAGVVRSSVKSVSELRGLVSHRNTADVRQEIRQSYELSPGARVEIAGL
Ga0070707_1002052474	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKRIVILVVLVAIAGVAGVVRSSVGSMSELRHIVSHQKASDVRQEIRQSYQLSPGARVELTGLNGAVKIETSDSNTAEVY
Ga0070679_1002408864	3300005530	Corn Rhizosphere	MKRIVILVVLVAIAGVAGVVRSSVGSVSELRHIVSHQKASDVRQEIRESYQLSPGARVELTGLNGAVKIETSDSNTAEVYIERTAGSQEAMDRRKVTIEADANRLTI
Ga0068853_1017382311	3300005539	Corn Rhizosphere	MKRIVILIVLLAIAGVAGVVRSSVKSVSELRGLVSHRNTADVRQEIRQSYELAPGARVEIVGLNGAVKIETSDTKTAEIYIERTASCQEALDRRKVTIEAD
Ga0070686_1015079461	3300005544	Switchgrass Rhizosphere	MKRIVILIVLVAIAGVAGVVRSSVKSVSELRGLVSHRNTADVRQEIRQSYELSPGARVEIVGLNGAVKIE
Ga0070696_1009303071	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MKRIMILVVLVAIAAVAGAVRSSVGSVSELRELVSHHNTGDVRQEIRETYQLSPGARVELSGLNGSVKIETSDSKTAEVYI
Ga0070696_1013200342	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MKRIVILVVLVAIAAVAGAVRSSVGSVSELRELVSHQNTGNVRQEIRETYQLSPGARV
Ga0070693_1006867062	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MKRIVIFVVLVLLAGVAGVVVRSASRGTVAEIRELVTHHNTDVREQIRQSYDLSPGARVELSGLNGAVNIETSDSNKAEVFIERTASSQ
Ga0070693_1015137471	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MKRIVILVVLVAIAAVAGAVRSSVGSVSELRGLVSHQNTGDVRQEIRETYELAPGARVELSGLNGSVKIETSDSKTAEVYIERTASTQDAMDRRKVTIVGDANSLTI
Ga0070704_1001762503	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MKRIIILIVLVLLAGIAGIVARSSSRAELRGLVSHQNVADVRQEIRQQYELAPGARVELVGLNGPVKIETSDSKTAEVYIERTA
Ga0070702_1009507531	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MKRIVILIVLVAIAGVAGIVRSSVGSVAELRQLASHRNAADVRQEIRQSYELAPGARVELTGLNGAVKIETSDSKTAEIYIERTASCQEAMDRR
Ga0068859_1003217451	3300005617	Switchgrass Rhizosphere	MKRIVVLVLLVAIAAVAGAVRSSVGSVSELRELVSHQNTGDVRQEIRETYQLSPGALVELSGLNGSVKIETS
Ga0068859_1022909511	3300005617	Switchgrass Rhizosphere	MKRIVILLVLVTIAGVAGVVVRSSKCSVGELRGLVSHNNVGDVREEIRQSYALSPGARVELAGLNGAVKIETSDSK
Ga0068864_1002421691	3300005618	Switchgrass Rhizosphere	MNRLLILLLLVVIAAIAGVVARSSSKEELRNLVSRHHASDVRQEIRQNYQLSPGARVELAGLNGPVKIETSDTKTAEVYIERTGSTQEALDRRKINIEANA
Ga0068864_1006341293	3300005618	Switchgrass Rhizosphere	MKRIMILVVLVAIAAVAGAVRSSVGSVSELRELVSHQNTGNVRQEIRETYELAPGARVELSGLNGSVKIETSDSKTAEVYIERTAST
Ga0068864_1015525501	3300005618	Switchgrass Rhizosphere	MKRIVVLVLLVAIAAVAGAVRSSVGSVSELRELVSHQNTGDVRQEIRETYQLSPGARVELSGLNGNVNIE
Ga0068864_1018453002	3300005618	Switchgrass Rhizosphere	MKRIVILVVLVGLAGIAGVVVRSSSGKGGTVAEIRELVSHDATNDVRQEIRQSYELAPGARVDLGGINGAVKIETSDTKTAEVYIERTASSQDALDRRK
Ga0068861_1010239611	3300005719	Switchgrass Rhizosphere	MKRIVILIVLVTIAGVAGVVVRSSKCSVGELRGLVSHNNAGDVREEIRQSYALSPGARVELAGLNGAVKIETSDSKTAEVFI
Ga0068861_1019536602	3300005719	Switchgrass Rhizosphere	MKRIVIFILLVLIAAVAGVVVRSASRGTVAEIRELVTHHHVSDVREQIRQSYDLSPGARVELAGLNGAVNIETSNTNKAEVLIERTATSQEALDRRKV
Ga0068870_109931332	3300005840	Miscanthus Rhizosphere	MKRIVILVVLVAIAAVAGAVRSSVGSVSELRGLVSHHNTGDVRQEIRETYQLSPGARVELSGLNGSVKIETSDSKTAEVYIERTAS
Ga0068863_1017588361	3300005841	Switchgrass Rhizosphere	MKRIVILVLLVAIAAVAGAVRSSVGSVSELRGLVSHQNTGDVRQEIRESYQLSPGARVELSGLNGNVNIETSD
Ga0068858_1001622683	3300005842	Switchgrass Rhizosphere	MKRIVILIVLVALAAVAGVVRSSVGSVAELREIVSHKNVADVRQEIRQSYELAPGARVDLSGLNGAVKIETSDSKTAE
Ga0075300_10227461	3300005876	Rice Paddy Soil	MKRIVILIVLVAIAGVAGVVRSSVKSVSELRGLVSHRNAADVRQEIRQTYELAPGARVEITGLNGA
Ga0075417_107200022	3300006049	Populus Rhizosphere	MKRVVILVVLVAIAGLAGVVRSSVGSISELRQLASHQNAADVRQEIRETYQLSPGARVELSGLNGNVKIETSDSNTAEVYIERTASSQEAMD
Ga0097621_1004162443	3300006237	Miscanthus Rhizosphere	MKRIVILVVLVAIAAVAGAVRSSVGSVSELRGLVSHQNTGDVRQEIRETYELAPGARVELAGLNGSVKIETSDSKTAEVYIE
Ga0079222_100087861	3300006755	Agricultural Soil	MKRVVILIVLVVIAGVAGVVRSSVGSVSELRGLVSHKNTADVRQEIRQTYELAPGARVELAGLNGAVKIETSDTKTAEVYIERT
Ga0079222_108913631	3300006755	Agricultural Soil	MKRIVILVVLVLVAGLAGMVVRSSRGAGAELRELVTHSNASDVRQEIRQSYELTPGARVELSGLNGAVKIETSDSNKAEVFIERTAASQDALDRRKVLIDADANSLR
Ga0075421_1020830412	3300006845	Populus Rhizosphere	MKRVVILVVLVAIAGVAGVVRSSVGSISELRQLASHQNAADVRQEVRETYQLSPGARVELAGLNGAVKIETSDSNTAEIYIERTASSQEVMDRRKITIEG
Ga0075431_1016549271	3300006847	Populus Rhizosphere	MKRIVILIVLVTIAGVAGVVVRSSKCSVGELRGLVSHNNVSDVREEIRQNYELSPGARVELIGLNGAVKIETSDSKTAEVYVER
Ga0075420_1016576011	3300006853	Populus Rhizosphere	MKRIVILIVLVTIAGVAGVVVRSSKCSVGELRGLVSHNNVSDVREEIRQNYELSPGARVELIGLNGAVKIETSDSKTAEV
Ga0075425_1029820451	3300006854	Populus Rhizosphere	MKRIVILIVLVILAGVAGVVVRSASRGELRGLVSHNDTGSAQQVIQETYQLSPGARVELIGLNGSVKIETSDTKTADVHIERNASSKEALDRRKVTVEAD
Ga0105251_102792602	3300009011	Switchgrass Rhizosphere	MKRIVILVLLVAVAAVAGAVRSSVGSVSELRELVSHQNTGSVRQEIRETYQLSPGARVELSGLNGAVKIETSDSKTAEVYI
Ga0105251_105383161	3300009011	Switchgrass Rhizosphere	MKRIVILIVLVAIAGVAGVVRSSVKSVSELRGLVSHRNTADVRQEIRQSYELAPGARVEIVGLNGAVK
Ga0105245_123908171	3300009098	Miscanthus Rhizosphere	MKRIVILIVLVAIAGVAGIVRSSVGSVAELRQLASHRNAADVRQEIRQSYELAPGARVELSGLNGAVKIETSDSKTAEIYIERTASCQEAMDRRKVT
Ga0105243_126653622	3300009148	Miscanthus Rhizosphere	MKRIVILVVLVAIAAVAGAVRSSVGSVSELRGLVSHQNTGSVRQEIRETYQLSPGARVELSGLNGAV
Ga0075423_121791112	3300009162	Populus Rhizosphere	MKRIVILIVLVILAGVAGVVVRSASRGELRGLVSHNDTGSAQQVIQETYQLSPGARVELIGLNGSVKIETSD
Ga0105241_100929685	3300009174	Corn Rhizosphere	MKRIVILVVLVTIAGVAGVVRSSVGSVSELRHIVSHQKASDVRQEIRESYQLSPGARVELTGLNGAVKIETSDS
Ga0105241_105117681	3300009174	Corn Rhizosphere	MKRIVILIVLVALAAVAGVVRSSVGSVAELREIVSHKNAADVRQEIRQSFELAPGARVELSGLNGTVKIETSDSKTAEIYIERTASCQEAMD
Ga0105241_107117813	3300009174	Corn Rhizosphere	MKRIVILVLLVTVAGVAGVVVRSSSCSVAELRGLVSHQNAADVRQEIRKSFELSPGARVELTGLNG
Ga0105242_112527433	3300009176	Miscanthus Rhizosphere	MKRIVILVVLVAIAAVAGAVRSSVGSVSELRGLVSHQNTGDVRQEIRETYELAPGARVEL
Ga0105248_132146172	3300009177	Switchgrass Rhizosphere	MKRIIILLVLVALAGIAGVVVRSSSSKGGTVAELRQLVSHNGEDAVRDEIRQNFELAPGARVDIAGINGAVRIETADTKTAEIYIERTASCK
Ga0105237_109886992	3300009545	Corn Rhizosphere	MKRIVILVLLVAIAAVAGAVRSSVGSVSELRELVSHQNTGSVRQEIRETYQLSPGARVELAGLNGSVKIETSDSKTAEVYIERTASSQEAMDRRKVTVEADANSLT
Ga0105238_125446321	3300009551	Corn Rhizosphere	MKRIVILIVLVALAAVAGVVRSSVGSVAELREIVSHKNAADVRQEIRQSYELTPGARVDLSGLNGAVKIETSDSKTAEIYIERTAS
Ga0126307_106841393	3300009789	Serpentine Soil	MKRILILVILVILAGIAGVVVRATSGATVSEIRGLVSHHSASDVREEIRQTYELAPGARVELAGLN
Ga0126305_106112611	3300010036	Serpentine Soil	MKRIIILIVLVTIAAVAGVVRSSVGSVADLRGLVSHNQTSDVRQEIRQTYELSPGARVELSGLNGAVKIETSDSQTAEVYIQRT
Ga0126304_100506481	3300010037	Serpentine Soil	MKRLIILILLVLIAGVAGMVVRSSSRGTVAELRGLVAHQDGGAAREEIRQSYELSPGARVELTGLNGAVKIETSDTTTAEVYVVRMA
Ga0126308_106785082	3300010040	Serpentine Soil	MKRIVIVILLVAIAAVAGVVRSSVGSVSELRGLVSHKNTADVRQEIRQTYELAPGARVELSGLNGAVKIEASDSKTAEI
Ga0126308_107636331	3300010040	Serpentine Soil	MKRILILVILVILAGIAGVLVRATSGATVSEIRDLVSHHSSSDVREEIRQTYELSPGARV
Ga0126311_109107791	3300010045	Serpentine Soil	MKRIVTVVVLVVLAAIAGIVARSSSKGEMRQLVSQKSGDVRENVRQSYELAPGARVELIGLNGSVNVETSDSKTAEVSI
Ga0126306_104146923	3300010166	Serpentine Soil	MKRIVILIVLVGIAAVAGVVRSSVGSVAELRGLVSHKHAADVRQEIRQSFELTPGARVELSGLNGAVKIETSDTKTAEVYIERTAS
Ga0126306_111741991	3300010166	Serpentine Soil	MKRIVILILLVVLAGIAGVVVRSSSGSGTVAEIRGLVSQNASGDVRDEIRQTYELAPGARVEVGGINGPVNIETADTSTAEIYIERT
Ga0134124_124532401	3300010397	Terrestrial Soil	MKRIVIFILLVLIAAVAGVVVRSASRGTVAEIRELVTHHHMSDVREQIRQSYDLSPGARVELAGLNGAVNIETSNTNKAEVLIERTATSQEALD
Ga0134127_109591831	3300010399	Terrestrial Soil	MKRIVILVVLVAIAAVAGAVRSSVGSVSELRGLVSHQNTGDVRQEIRETYELAPRARVELAGLNGSVKIETSDSKTAEVYIERTASTQDAMDRRKVTIVGDANS
Ga0134127_109754762	3300010399	Terrestrial Soil	LVLLVAIAAVAGAVRSSVGSVSELKGLVSHQNTGDVRQEIRESYQLSPGARVELSGLNGAVKIETSDSKTA*
Ga0134127_135135421	3300010399	Terrestrial Soil	MILVVLVAIAAVAGAVRSSVGSVSELRELVSHHNTGDVRQEIRETYQLSPGARVELSGLNGSVKIETSDSKTAEVYIERT
Ga0134127_137034952	3300010399	Terrestrial Soil	MKRVVILVVLVVIAGLAGVVRSSVGSISELRQLASHHDGNAVRQEIRETYQLSPGARVELAGLNGAVKIETSDTDKAE
Ga0134122_102973943	3300010400	Terrestrial Soil	MKRIVILVVLVAIAAVAGAVRSSVGSVSELRGLVSHQNTGDVRQEIRETYELAPGARVELAGLNGSVKIETSDSK
Ga0134122_125496602	3300010400	Terrestrial Soil	MKRIVILIVLVAVAGVAGVVRSSVSSVAELRGLVSHKNTADVRQEIRQSYTLAPGARVELSGLNGAVKIETSDSNTAEIFIERTASCQEAMDRRKVTIESDSN
Ga0105246_101104221	3300011119	Miscanthus Rhizosphere	MKRIVILIVLVTIAGVAGVVVRSSKCSVGELRGLVSHNNAGDVREEIRQTYELSPGARVE
Ga0164303_102321743	3300012957	Soil	MKRIVILVVLVALAGVAGVVRSSVGSISELRGLASHQNSSDVRQDIRQTYQLSPGARVELSGLNGAVKIE
Ga0164305_121118582	3300012989	Soil	MKRIVILIVLVAIAGVAGVVRSSVGSVSELRGLVSHKNAADVRQEIRQTYELAPGARVEIAGLNGAVKIET
Ga0157373_101813704	3300013100	Corn Rhizosphere	MKRIVIFVILVLVAGVAGVVVRSSGGTAAEIRELVSHENASDVRQEIRRSFELAPGARVDLSGLNGAVNIETSDTNKAEVFIERTAASQEALD
Ga0157371_103202363	3300013102	Corn Rhizosphere	MKRIVILVLLVAIAAVAGAVRSSVGSVSELRELVSHQNTGSVRHEIRETYQLSPGARVELAGLNGSVKI
Ga0157378_127175862	3300013297	Miscanthus Rhizosphere	MILVVLVAIAAVAGAVRSSVGSVSELRELVSHHNTGDVRQEIRETYQLSPGARVELSGLNGSVKIETSDSKTAEVYIERTASTQE
Ga0163162_110980923	3300013306	Switchgrass Rhizosphere	MKRIVILVLLVAIAAVAGAVRSSVGSVSELRELVSHQNTGSVRQEIRETYQLSPGARVELAGLNGSVKIETSDSKTAEVYIERTA
Ga0157372_130463682	3300013307	Corn Rhizosphere	MKRIVIFVVLVLLAGVAGVVVRSASRGTVAEIRELVTHHNTDVREQIRQSYDLSPGARVELSGLNGAV
Ga0075324_10050721	3300014263	Natural And Restored Wetlands	MKRIVILVVLVILAGIAGVVVRSTSGGTVSEIRGLVSHEKAADVRQEIRQTYELSPGARVELLGLNGAVKIETSDSKTAEVHIERI
Ga0075344_10599233	3300014296	Natural And Restored Wetlands	MKRIVILTLLVAIAGIAGMVVRSKGGTAAELRGLITHNNQSDVREEIRKDFELAPGARVELTGLNGRVRIETSETTRAEVFIERTAPSQEALNRRKVSVEGDA
Ga0163163_127590932	3300014325	Switchgrass Rhizosphere	MKRIVILILLVLIAAVAGVVVRSASRGTVAEIRELVTHHHVSDVREEIRQSYQLSPGARVELAGLNGAVNIETANT
Ga0157380_106916763	3300014326	Switchgrass Rhizosphere	MKRIVILVVLVAIAAVAGAVRSSVGSVSELRGLVSHQNTGDVRQEIHETYELSPGARVELAGLNGSVKIETSD
Ga0157377_101630893	3300014745	Miscanthus Rhizosphere	MKRIVILILLVVMAGLAGAVVRSSSGREIRGLVSQNASGDVRDEIRQSYELAPGARVDVGGINGPVKIETSDTKTAEVYIER
Ga0157377_105389122	3300014745	Miscanthus Rhizosphere	MKRIVILIVLVAIAGVAGVVRSSVKSVSELRGLVSHRNTADVRQEIRQSYELSPGARVELVGLNGAVKIETSDTKTAEIYIERT
Ga0157379_106207531	3300014968	Switchgrass Rhizosphere	MKRIVILIVLVALAAVAGVVRSSVGSVAELREIVSHKNAADVRQEIRQSYELAPGARVDLSGLNGAVKIETSDSKTAEIYIERTASCQEAM
Ga0157379_117105892	3300014968	Switchgrass Rhizosphere	MKRIVIFVVLVLLAGIAGVVVRSASRGTVAEIRELVTHHNTDVREQIRQSYELSPGARVELTGLNGAVNIETSDTNKAEVFIE
Ga0132255_1002759224	3300015374	Arabidopsis Rhizosphere	MKRIVILVLLVAIAAIAGVVRSSVGSVADLRGLVSHRNTADVRQEIRQTYELAPGARVEVFGLNGAVRIETSDTK
Ga0190274_107704663	3300018476	Soil	MKRVVILVVLVAIAGVAGVVRSSVGSISELRGLASHQNVSDVRQEIRETYQLSPGARVELAG
Ga0066669_121105951	3300018482	Grasslands Soil	MKRILILVVLVGLAGIAGVVVRSSSSKGGTVAELRELVSHNAADDVRQIIRQSYELAPGARVDLGGLNGPVKIETADTKTAEVYIERTGSWQQA
Ga0182009_100946911	3300021445	Soil	MKRIVILVVLVLVAGLAGVVVRSSRGTCAELRELVTHHNASDVRQEIRQSYELTPGARVELSGLNGAVNIETSDSNKAEVFIERTAATQEA
Ga0182009_108298601	3300021445	Soil	MKRILILIVLVALAGIAGVVVRSSAELRGLVSHQNTTGNVIQKIHQTYELAPGARVDLSG
Ga0207688_109163902	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MKRIVILIVLVAIAGVAGIVRSSVGSVAELRQLASHKNTADVRQEIRQTYELAPGARVELSGLNGAVKIETSDTKTAEIYIER
Ga0207643_104379513	3300025908	Miscanthus Rhizosphere	MKRIVILVVLVAIAAVAGAVRSSVGSVSELRGLVSHHNTGDVRQEIRETYQLSPGARVELSGLNGSVKIETSD
Ga0207643_107641372	3300025908	Miscanthus Rhizosphere	MKRIVILIVLVAIAGVAGVVRSSVGSVSELRGLVSHKHSADVRQEIRQTYELAPGARVEITGLNGAVKIETSD
Ga0207654_112283891	3300025911	Corn Rhizosphere	MKRIVILIVLVAIAGVAGVVRSSVKSVSELRGLVSHKNMADVRQEIRQSYELAPGARVELVGLNGAVKIETSDTKTAEIYIERTASCQEAMDRRKITIEAD
Ga0207662_100563624	3300025918	Switchgrass Rhizosphere	MKRIVILIVLVVIAGVAGVVRTSVGSVAELRGLVSHKNAADVRQEIRQTYELAPGARVELSGLNGAVK
Ga0207657_106098093	3300025919	Corn Rhizosphere	MKRIVILIVLVAIAGVAGVVRSSVGSVAEWRGLVSHRNAADVRQEIRQTYELTPGARVELAGLNGAVRIETSDTKTAEIYIERT
Ga0207652_102100421	3300025921	Corn Rhizosphere	MKRIVILVVLVAIAGVAGVVRSSVGSVSELRHIVSHQKASDVRQEIRESYQLSPGARVELTGLNGAVKIETSDSN
Ga0207687_118146461	3300025927	Miscanthus Rhizosphere	MKRIVILIVLVAIAGVAGIVRSSVGSVAELRQLASHRNAADVRQEIRQSYELAPGARVELSGLNGAVKIETSDSKTAEIYIERTASTQDAMDRRKVTIEADANS
Ga0207701_103755343	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MKRIVILIVLVAIAGVAGVVRSSVKSVSELRALVSHRNTADVRQEIRQSYELSPGARVEIAGLNGAVKIETSDTK
Ga0207701_105421953	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MKRIVILVVLVLVAGVAGVVVRSSSGTVKEIRELVSHNNVSDVRQEIRQSYTLSPGARIELIGLNGAVKIETADTDKAEVFIERTASSQEALDRR
Ga0207665_109119392	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKRIVIFVILVLVAGVAGVVVRSSGGTAAEIRELVSHDNASDVRQEIRRSFELAPGARVDLSGLNGAVNIETSDTNKAEVFIERTAASQEA
Ga0207711_106136221	3300025941	Switchgrass Rhizosphere	MKRIVVLVLLVAIAAVAGAVRSSVGSVSELRELVSHQNTGDVRQEIRETYQLSPGARV
Ga0207711_114423752	3300025941	Switchgrass Rhizosphere	MKRIVILVLLVAIAAVAGAVRSSVGSVSELRELVSHQNTGSVRQEIRETYQLSPGARVELAGLNGSVKIGTSDSKTAEVYIE
Ga0207689_105570221	3300025942	Miscanthus Rhizosphere	MKRIVILIVLVAIAGVAGIVRSSVGSVAELRQLASHRNAADVRQEIRQSYELAPGARVELSGLNGAVKIETSDSKTAEIYIERTASCQEAMDRRKVTIEADANSLRIR
Ga0207689_114359111	3300025942	Miscanthus Rhizosphere	MKRIVIFILLVLIAAVAGVVVRSASRGTVAEIRELVTHHHVSDVREQIRQSYELSPGARVELAGLNGAVNIETS
Ga0207679_114017381	3300025945	Corn Rhizosphere	MKRIVILIVLVAIAGVAGIVRSSVGSVAELRQLASHKNAADVRQEIRQSYELAPGARVELSGLNGAVKIETSDSKTAEIYIERTASCQEAMDRRKVTIEADANSLRIRG
Ga0207651_120154391	3300025960	Switchgrass Rhizosphere	MKRIVILIVLVAIAGVAGVVRSSVKSVSELRGLVSHRNTADVRQEIRQSYELSPGARVELVGLNGAVKIETSDTKTAEI
Ga0207651_120217341	3300025960	Switchgrass Rhizosphere	MKRIVILVLLVAIAAVAGAVRSSVGSVSELRELVSHQNTGSVRQEIRETYQLSPGARVELAGLNGSVKIETSDSKTAEVYIERTASSQEAMD
Ga0207640_115457832	3300025981	Corn Rhizosphere	MKRIVILIVLVAIAGVAGVVRSSVKSVSELRGLVSHRNTADVRQEIRQSYELSPGARVEIVGLNGAVKIETS
Ga0207639_108037473	3300026041	Corn Rhizosphere	MKRIVILIVLVALAAVAGVVRSSVGSVAELREIVSHKNAADVRQEIRQSYELTPGARVDLSGLNGAVKIETSDSKTAEIYIERTA
Ga0208780_10186851	3300026046	Natural And Restored Wetlands	MKRIVILVVLVILAGIAGVVVRSTSGGTVSEIRGLVSHEKAADVRQEIRQTYELSPGARVELLGLNGAVKIETSDSKTAEVH
Ga0207641_106269501	3300026088	Switchgrass Rhizosphere	MKRIVIFILLVLIAAVAGVVVRSASRGTVAEIRELVTHHHVSDVREEIRQSYQLSPGARVELAGLNGAVNIETANTNRAEV
Ga0207641_107506711	3300026088	Switchgrass Rhizosphere	MKRIVILVLLVAIAAVAGAVRSSVGSVSELRGLVSHQNTGDVRQEIRESYQLSPGARVELSGLNGNVNIETSDRKAA
Ga0207641_126335831	3300026088	Switchgrass Rhizosphere	MKRIVILVLLVTIAAVAGVVRSSVGSVAELRGLVSHRNAADVRHEIRQTHELSPGARVELSGL
Ga0207676_113562581	3300026095	Switchgrass Rhizosphere	MKRIVIVVLLVAIAGVAGVVRTSVGSVAELRGLVSHRNAADVRQEIRQTYELAPGARVELAGLNGAVKIETSDTKTA
Ga0207676_116776471	3300026095	Switchgrass Rhizosphere	MKRIVIFILLVLIAAVAGVVVRSASRGTVAEIRELVTHHHVSDVREQIRQSYELSPGARVELAGLNGAVNIET
Ga0207674_112870212	3300026116	Corn Rhizosphere	MKRIVVLVLLVAIAAVAGAVRSSVGSVSELRELVSHQNTGDVRQEIRETYQLSPGARVELSGLNGSVKIETSDS
Ga0207675_1008838793	3300026118	Switchgrass Rhizosphere	MKRIVILIVLVAIAGVAGIVRSSVGSVAELRQLASHKNTADVRQEIRQTYELAPGARVELSGLNGA
Ga0207675_1012588062	3300026118	Switchgrass Rhizosphere	VAIAGVAGVVRSSVGSVAELRGLVSHKNAADVRQEIRQTYELAPGARVELSGLNGAVKIETSDT
Ga0207675_1020602041	3300026118	Switchgrass Rhizosphere	MKRIVIFILLVLIAAVAGVVVRSASRGTVAEIRELVTHHHMSDVREQIRQSYDLSPGARVELAGLNGAVNIETSNTNKAEVLIERTATSQEALDRRKV
Ga0207698_112316232	3300026142	Corn Rhizosphere	MKRIVILVVLVAIAAVAGAVRSSVGSVSELRGLVSHQNTGDVRQEIHETYELSPGARVELAGLNGSVKIETSDS
Ga0207698_112613671	3300026142	Corn Rhizosphere	MKRIVILIVLVAIAGVAGVVRSSVGSVSELRGLVSHKHSADVRQEIRQTYELAPGARVEITGLSGAVKIETSDSKTAEI
Ga0207698_120731841	3300026142	Corn Rhizosphere	MKRIVILVLLVTIAAVAGVVRSSVGSVAELRGLVSHRNAADVRHEIRQTHELSPGARVELSGLNGA
Ga0209153_10263861	3300026312	Soil	MKRLIIVIVLVVLAGFAGVVVRSSSGGTISDIRGLVSHRDANEVRQEIRHNYQLSPGARVELTGLNGAVKIETSDTKTAEVYIERTASS
Ga0268265_123919822	3300028380	Switchgrass Rhizosphere	MKRIVILVLLVAVAAVAGAVRSSVGSVSELRELVSHQNTGSVRQEIRETYQLSPGARVELSGL
Ga0268264_103210831	3300028381	Switchgrass Rhizosphere	MKRIVILVLLVAIAAVAGAVRSSVGSVSELRELVSHQNTGSVRQEIRETYQLSPGARVELAGLNGSVKIETSDSKTAEVYIERTASSQEAMDRRKVTVEADANSLTI
Ga0268264_108176383	3300028381	Switchgrass Rhizosphere	MKRIVILIVLVTIAGVAGVVVRSSKCSVGELRGLVSHNNAGDVREEIRQTYELSPGARVELAGLNGAVK
Ga0268264_113240461	3300028381	Switchgrass Rhizosphere	MKRIVILIVLVAIAGVAGVVRSSVKSVSELRGLVSHRNTADVRQEIRQSYELSPGARVELVGLNGAVKIETSDT
Ga0268241_101942382	3300030511	Soil	MKRIVIVVLLVAIAGVAGVVRSSVGSVAELRGLVSHRNAADVRQEIRQSYELAPGARVELAGLNGAVKIETSDTKTAEIYIERTASCQEALDRRKVTIEA
Ga0310813_105216083	3300031716	Soil	MKRIVVLVLLVAIAAVAGAVRSSVGSVSELRELVSHQNTGDVRQEIRETYQLSPGARVELSGLNGSVKIETSDSKTAEVYIERTASTQEAMDRRKVTIVGDAN
Ga0307405_105772421	3300031731	Rhizosphere	MKRIVILIVLVTIAGVAGVVVRSSKCSVGELRGLVSHNNVSDAREEIRQNYELSPGARVELIGLN
Ga0310890_117471582	3300032075	Soil	MKRIVILIVLVTIAGVAGVVVRSSNCSVGELRGLVSHNNARDVREEIRQSYELSPGARVELIGLN
Ga0310812_101568711	3300032421	Soil	MKRIVIFVILVLVAGVAGVVVRSSGGTAAEFRELVSHNNANDVRQEIRQSYELAPGARVELSGLNGAVNIETSDTNKAEVFIERTA
Ga0310810_104279851	3300033412	Soil	MKRIVIFVVLVLLAGIAGVVVRSASRGTVAEIRELVTHHNTDVREQIRQSYELSPGARVELTGLNGAVNIETSDTNKA
Ga0310810_113405092	3300033412	Soil	MKRIVILVVLVLVAGLAGVVVRSSRGACAELRELVSHRNASDVRQEIRHSYELTPGARVELSGLNGAVKIETSDSNKAEVFIERTAASQEALDRRKVLIDADANSLRIHG
Ga0310811_101674491	3300033475	Soil	MKRIVIFVILVLVAGVAGVVVRSSGGTAAEFRELVSHNNANDVRQEIRQSYELAPGARVELSGLNGAVNIETSDTNKAEVF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F048379

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences