Metagenome / Metatranscriptome Family F048454

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F048454
Family Type	Metagenome / Metatranscriptome
Number of Sequences	148
Average Sequence Length	48 residues
Representative Sequence	GARWVYDSDALGAIRRDVMTILTHHAASRQAAMAPYGRLLLSRDAG
Number of Associated Samples	114
Number of Associated Scaffolds	147

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	10.81 %
% of genes near scaffold ends (potentially truncated)	85.14 %
% of genes from short scaffolds (< 2000 bps)	92.57 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (87.162 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (27.027 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.946 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.05% β-sheet: 0.00% Coil/Unstructured: 45.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 147 Family Scaffolds
PF14696	Glyoxalase_5	5.44
PF13432	TPR_16	4.76
PF04255	DUF433	4.08
PF00732	GMC_oxred_N	4.08
PF02771	Acyl-CoA_dh_N	4.08
PF01381	HTH_3	3.40
PF04221	RelB	2.72
PF01783	Ribosomal_L32p	2.72
PF00873	ACR_tran	2.04
PF00903	Glyoxalase	2.04
PF14559	TPR_19	2.04
PF09296	NUDIX-like	1.36
PF08028	Acyl-CoA_dh_2	1.36
PF02798	GST_N	1.36
PF01850	PIN	1.36
PF01578	Cytochrom_C_asm	1.36
PF13533	Biotin_lipoyl_2	1.36
PF14248	DUF4345	1.36
PF00072	Response_reg	0.68
PF00106	adh_short	0.68
PF00581	Rhodanese	0.68
PF00962	A_deaminase	0.68
PF00122	E1-E2_ATPase	0.68
PF13667	ThiC-associated	0.68
PF02525	Flavodoxin_2	0.68
PF03681	Obsolete Pfam Family	0.68
PF02602	HEM4	0.68
PF09982	DUF2219	0.68
PF07143	CrtC	0.68
PF01738	DLH	0.68
PF01927	Mut7-C	0.68
PF00118	Cpn60_TCP1	0.68
PF02504	FA_synthesis	0.68
PF00270	DEAD	0.68
PF08327	AHSA1	0.68
PF00211	Guanylate_cyc	0.68
PF01135	PCMT	0.68
PF00239	Resolvase	0.68
PF03631	Virul_fac_BrkB	0.68
PF04909	Amidohydro_2	0.68
PF02452	PemK_toxin	0.68
PF01965	DJ-1_PfpI	0.68
PF09297	zf-NADH-PPase	0.68
PF01650	Peptidase_C13	0.68
PF05711	TylF	0.68
PF07690	MFS_1	0.68
PF04014	MazE_antitoxin	0.68
PF01863	YgjP-like	0.68
PF15579	Imm52	0.68
PF03466	LysR_substrate	0.68
PF03918	CcmH	0.68
PF00490	ALAD	0.68
PF00561	Abhydrolase_1	0.68

COG ID	Name	Functional Category	% Frequency in 147 Family Scaffolds
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	5.44
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	4.08
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	4.08
COG0333	Ribosomal protein L32	Translation, ribosomal structure and biogenesis [J]	2.72
COG3077	Antitoxin component of the RelBE or YafQ-DinJ toxin-antitoxin module	Defense mechanisms [V]	2.72
COG2816	NADH pyrophosphatase NudC, Nudix superfamily	Nucleotide transport and metabolism [F]	2.04
COG0113	Delta-aminolevulinic acid dehydratase, porphobilinogen synthase	Coenzyme transport and metabolism [H]	0.68
COG0272	NAD-dependent DNA ligase	Replication, recombination and repair [L]	0.68
COG0416	Acyl-ACP:phosphate acyltransferase (fatty acid/phospholipid biosynthesis)	Lipid transport and metabolism [I]	0.68
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.68
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	0.68
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.68
COG1451	UTP pyrophosphatase, metal-dependent hydrolase family	General function prediction only [R]	0.68
COG1587	Uroporphyrinogen-III synthase	Coenzyme transport and metabolism [H]	0.68
COG1656	Uncharacterized conserved protein, contains PIN-related Mut7-C RNAse domain	General function prediction only [R]	0.68
COG1816	Adenosine/6-amino-6-deoxyfutalosine deaminase	Nucleotide transport and metabolism [F]	0.68
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.68
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.68
COG2216	K+ transport ATPase, ATPase subunit KdpB	Inorganic ion transport and metabolism [P]	0.68
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	0.68
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.68
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.68
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.68
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.68
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	0.68
COG3088	Cytochrome c-type biogenesis protein CcmH/NrfF	Posttranslational modification, protein turnover, chaperones [O]	0.68
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.68
COG5206	Glycosylphosphatidylinositol transamidase (GPIT), subunit GPI8	Posttranslational modification, protein turnover, chaperones [O]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.16 %
Unclassified	root	N/A	12.84 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.16 %
Unclassified	root	N/A	12.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.16 %
Unclassified	root	N/A	12.84 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	61.49 %
Unclassified	root	N/A	12.84 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.68 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.68 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.68 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	44.59 %
Unclassified	root	N/A	12.84 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.35 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.68 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.68 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.84 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	11.49 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.70 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.70 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.68 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.68 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.68 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.68 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.84 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.49 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.70 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.68 %
Chelatococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae	0.68 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.68 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.68 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.68 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.68 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.68 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.84 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.49 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.70 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.68 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.68 %
Chelatococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus	0.68 %
Rhodanobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter	0.68 %
Methylocella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella	0.68 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.68 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.68 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.84 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.49 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.70 %
Chelatococcus daeguensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus → Chelatococcus daeguensis	0.68 %
Pseudomonas cavernicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas cavernicola	0.68 %
unclassified Rhodanobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → unclassified Rhodanobacter	0.68 %
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira	0.68 %
Methylocella tundrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella → Methylocella tundrae	0.68 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.68 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.68 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.84 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.49 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.70 %
Nitrospira sp. KM1	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	0.68 %
Rhodanobacter sp. MP1X3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → unclassified Rhodanobacter → Rhodanobacter sp. MP1X3	0.68 %
Chelatococcus daeguensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus → Chelatococcus daeguensis	0.68 %
Pseudomonas cavernicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas cavernicola	0.68 %
Methylocella tundrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella → Methylocella tundrae	0.68 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.68 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.68 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459014\|G1P06HT01BVF6I	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	617	Open in IMG/M
3300002568\|C688J35102_118489526	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300004091\|Ga0062387_100599842	All Organisms → cellular organisms → Bacteria → Proteobacteria	789	Open in IMG/M
3300004091\|Ga0062387_101777305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	503	Open in IMG/M
3300004092\|Ga0062389_102952485	All Organisms → cellular organisms → Bacteria → Proteobacteria	636	Open in IMG/M
3300004635\|Ga0062388_101640765	All Organisms → cellular organisms → Bacteria → Proteobacteria	655	Open in IMG/M
3300005332\|Ga0066388_104002585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	751	Open in IMG/M
3300005332\|Ga0066388_106507254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	589	Open in IMG/M
3300005344\|Ga0070661_101431099	Not Available	582	Open in IMG/M
3300005468\|Ga0070707_100480678	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300005471\|Ga0070698_100566381	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300005471\|Ga0070698_100959351	All Organisms → cellular organisms → Bacteria → Proteobacteria	802	Open in IMG/M
3300005534\|Ga0070735_10458933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	760	Open in IMG/M
3300005535\|Ga0070684_100698851	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300005598\|Ga0066706_10957012	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300005614\|Ga0068856_102622006	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300006175\|Ga0070712_100956671	All Organisms → cellular organisms → Bacteria → Proteobacteria	740	Open in IMG/M
3300006796\|Ga0066665_11412404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	539	Open in IMG/M
3300006853\|Ga0075420_101934734	Not Available	504	Open in IMG/M
3300009090\|Ga0099827_11032122	Not Available	714	Open in IMG/M
3300009137\|Ga0066709_102763631	Not Available	652	Open in IMG/M
3300009137\|Ga0066709_103754423	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300009444\|Ga0114945_10863306	All Organisms → cellular organisms → Bacteria → Proteobacteria	557	Open in IMG/M
3300010043\|Ga0126380_11452050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	605	Open in IMG/M
3300010047\|Ga0126382_11582744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	607	Open in IMG/M
3300010162\|Ga0131853_10794001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	763	Open in IMG/M
3300010303\|Ga0134082_10060524	All Organisms → cellular organisms → Bacteria → Proteobacteria	1463	Open in IMG/M
3300010343\|Ga0074044_10093429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2026	Open in IMG/M
3300010343\|Ga0074044_10405816	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300010361\|Ga0126378_10113958	All Organisms → cellular organisms → Bacteria → Proteobacteria	2695	Open in IMG/M
3300010361\|Ga0126378_12884321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	549	Open in IMG/M
3300010376\|Ga0126381_100059708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → unclassified Rhodanobacter → Rhodanobacter sp. MP1X3	4706	Open in IMG/M
3300010376\|Ga0126381_100074884	All Organisms → cellular organisms → Bacteria → Proteobacteria	4237	Open in IMG/M
3300010376\|Ga0126381_100613223	All Organisms → cellular organisms → Bacteria → Proteobacteria	1549	Open in IMG/M
3300010376\|Ga0126381_100692458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1457	Open in IMG/M
3300010376\|Ga0126381_101405169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1009	Open in IMG/M
3300010376\|Ga0126381_102598809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	725	Open in IMG/M
3300010398\|Ga0126383_13192983	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	535	Open in IMG/M
3300010399\|Ga0134127_12503376	Not Available	596	Open in IMG/M
3300011270\|Ga0137391_10437325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1114	Open in IMG/M
3300011440\|Ga0137433_1133633	All Organisms → cellular organisms → Bacteria → Proteobacteria	792	Open in IMG/M
3300012096\|Ga0137389_11321044	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	615	Open in IMG/M
3300012154\|Ga0153953_1075213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	610	Open in IMG/M
3300012202\|Ga0137363_10159482	All Organisms → cellular organisms → Bacteria → Proteobacteria	1779	Open in IMG/M
3300012207\|Ga0137381_10335123	All Organisms → cellular organisms → Bacteria	1318	Open in IMG/M
3300012209\|Ga0137379_10373286	All Organisms → cellular organisms → Bacteria	1335	Open in IMG/M
3300012212\|Ga0150985_101571122	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300012212\|Ga0150985_107530023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	968	Open in IMG/M
3300012212\|Ga0150985_116795729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1138	Open in IMG/M
3300012361\|Ga0137360_10035839	All Organisms → cellular organisms → Bacteria → Proteobacteria	3471	Open in IMG/M
3300012362\|Ga0137361_10342570	All Organisms → cellular organisms → Bacteria	1371	Open in IMG/M
3300012362\|Ga0137361_10861003	Not Available	823	Open in IMG/M
3300012363\|Ga0137390_10523518	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300012363\|Ga0137390_11725260	Not Available	560	Open in IMG/M
3300012683\|Ga0137398_10113398	All Organisms → cellular organisms → Bacteria	1721	Open in IMG/M
3300012918\|Ga0137396_11068842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	579	Open in IMG/M
3300012922\|Ga0137394_10162455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1903	Open in IMG/M
3300012923\|Ga0137359_10803474	All Organisms → cellular organisms → Bacteria → Proteobacteria	815	Open in IMG/M
3300012927\|Ga0137416_11394023	Not Available	635	Open in IMG/M
3300012929\|Ga0137404_11179960	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300012930\|Ga0137407_11229446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	711	Open in IMG/M
3300014150\|Ga0134081_10420645	Not Available	505	Open in IMG/M
3300015264\|Ga0137403_10233982	All Organisms → cellular organisms → Bacteria	1755	Open in IMG/M
3300015264\|Ga0137403_10233982	All Organisms → cellular organisms → Bacteria	1755	Open in IMG/M
3300015372\|Ga0132256_102473304	Not Available	621	Open in IMG/M
3300016319\|Ga0182033_10501983	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300016341\|Ga0182035_10500323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1038	Open in IMG/M
3300016341\|Ga0182035_10697172	Not Available	884	Open in IMG/M
3300016341\|Ga0182035_11618085	All Organisms → cellular organisms → Bacteria → Proteobacteria	584	Open in IMG/M
3300016371\|Ga0182034_11983609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	514	Open in IMG/M
3300016445\|Ga0182038_10186240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1621	Open in IMG/M
3300017955\|Ga0187817_11110168	All Organisms → cellular organisms → Bacteria → Proteobacteria	508	Open in IMG/M
3300018001\|Ga0187815_10009810	All Organisms → cellular organisms → Bacteria → Proteobacteria	4224	Open in IMG/M
3300018062\|Ga0187784_10137627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1994	Open in IMG/M
3300018482\|Ga0066669_11738067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	574	Open in IMG/M
3300020579\|Ga0210407_10328994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1195	Open in IMG/M
3300020580\|Ga0210403_10546942	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300020580\|Ga0210403_11032117	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300020581\|Ga0210399_11561063	Not Available	510	Open in IMG/M
3300021171\|Ga0210405_10260502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1372	Open in IMG/M
3300021178\|Ga0210408_10473155	All Organisms → cellular organisms → Bacteria → Proteobacteria	997	Open in IMG/M
3300021406\|Ga0210386_11398699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	586	Open in IMG/M
3300021476\|Ga0187846_10068711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus → Chelatococcus daeguensis	1547	Open in IMG/M
3300021476\|Ga0187846_10444842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	531	Open in IMG/M
3300021478\|Ga0210402_12012863	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300021560\|Ga0126371_10503972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1359	Open in IMG/M
3300021560\|Ga0126371_10870446	Not Available	1046	Open in IMG/M
3300021560\|Ga0126371_12525872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella → Methylocella tundrae	622	Open in IMG/M
3300021560\|Ga0126371_13613521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300024227\|Ga0228598_1087593	Not Available	626	Open in IMG/M
3300026317\|Ga0209154_1203552	All Organisms → cellular organisms → Bacteria → Proteobacteria	759	Open in IMG/M
3300026318\|Ga0209471_1121614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1110	Open in IMG/M
3300027824\|Ga0209040_10201822	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300027857\|Ga0209166_10286133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	869	Open in IMG/M
3300027882\|Ga0209590_11014146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas cavernicola	517	Open in IMG/M
3300027903\|Ga0209488_10684986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	736	Open in IMG/M
3300027986\|Ga0209168_10321013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	759	Open in IMG/M
3300028906\|Ga0308309_11722761	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300029636\|Ga0222749_10691274	All Organisms → cellular organisms → Bacteria → Proteobacteria	558	Open in IMG/M
3300030716\|Ga0307920_115817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	713	Open in IMG/M
3300030740\|Ga0265460_11825462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	624	Open in IMG/M
3300030903\|Ga0308206_1109390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	628	Open in IMG/M
3300031057\|Ga0170834_109821258	Not Available	610	Open in IMG/M
3300031231\|Ga0170824_115848309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	980	Open in IMG/M
3300031446\|Ga0170820_11371467	Not Available	798	Open in IMG/M
3300031446\|Ga0170820_16382052	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300031545\|Ga0318541_10123612	All Organisms → cellular organisms → Bacteria	1406	Open in IMG/M
3300031545\|Ga0318541_10210523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1077	Open in IMG/M
3300031546\|Ga0318538_10027308	All Organisms → cellular organisms → Bacteria	2626	Open in IMG/M
3300031561\|Ga0318528_10196922	Not Available	1077	Open in IMG/M
3300031561\|Ga0318528_10499089	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300031668\|Ga0318542_10405534	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300031681\|Ga0318572_10341353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	888	Open in IMG/M
3300031708\|Ga0310686_106175659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	581	Open in IMG/M
3300031708\|Ga0310686_110069830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2676	Open in IMG/M
3300031708\|Ga0310686_110262985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	668	Open in IMG/M
3300031719\|Ga0306917_10370863	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300031719\|Ga0306917_10450570	All Organisms → cellular organisms → Bacteria → Proteobacteria	1008	Open in IMG/M
3300031723\|Ga0318493_10440356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	716	Open in IMG/M
3300031747\|Ga0318502_10406085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	810	Open in IMG/M
3300031754\|Ga0307475_10356038	All Organisms → cellular organisms → Bacteria	1176	Open in IMG/M
3300031763\|Ga0318537_10046576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1567	Open in IMG/M
3300031768\|Ga0318509_10414171	Not Available	753	Open in IMG/M
3300031778\|Ga0318498_10340833	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300031832\|Ga0318499_10228975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	723	Open in IMG/M
3300031835\|Ga0318517_10211799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	874	Open in IMG/M
3300031846\|Ga0318512_10213573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	946	Open in IMG/M
3300031890\|Ga0306925_10032758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5319	Open in IMG/M
3300031896\|Ga0318551_10384529	All Organisms → cellular organisms → Bacteria → Proteobacteria	797	Open in IMG/M
3300031897\|Ga0318520_10926429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	549	Open in IMG/M
3300031942\|Ga0310916_11196583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	628	Open in IMG/M
3300031947\|Ga0310909_10457227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1071	Open in IMG/M
3300031954\|Ga0306926_12966392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	508	Open in IMG/M
3300032042\|Ga0318545_10014261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2455	Open in IMG/M
3300032042\|Ga0318545_10080129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1130	Open in IMG/M
3300032059\|Ga0318533_10522594	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300032060\|Ga0318505_10439619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	616	Open in IMG/M
3300032094\|Ga0318540_10222170	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300032261\|Ga0306920_100134448	All Organisms → cellular organisms → Bacteria	3681	Open in IMG/M
3300032261\|Ga0306920_101412731	Not Available	997	Open in IMG/M
3300032261\|Ga0306920_102530715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	705	Open in IMG/M
3300032515\|Ga0348332_11931435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	587	Open in IMG/M
3300032895\|Ga0335074_11520475	All Organisms → cellular organisms → Bacteria → Proteobacteria	531	Open in IMG/M
3300032896\|Ga0335075_11714989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	510	Open in IMG/M
3300032898\|Ga0335072_11517360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	571	Open in IMG/M
3300033289\|Ga0310914_10237590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1635	Open in IMG/M
3300033289\|Ga0310914_10769811	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300033289\|Ga0310914_11271579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	638	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.57%
Host-Associated	Host-Associated	6.76%
Engineered	Engineered	0.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.49%
Aquatic	Environmental → Aquatic	6.08%
Plants	Host-Associated → Plants	5.41%
Arthropoda	Host-Associated → Arthropoda	0.68%
Fungi	Host-Associated → Fungi	0.68%
Solid Waste	Engineered → Solid Waste	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.46%
Freshwater	Environmental → Aquatic → Freshwater	4.73%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.70%
Cave	Environmental → Terrestrial → Cave	1.35%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.68%
Sediment	Environmental → Aquatic → Sediment	0.68%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.68%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.68%
Mycelium	Host-Associated → Fungi → Mycelium	0.68%
Grass	Engineered → Solid Waste → Grass	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.65%
Loam	Environmental → Terrestrial → Soil → Loam	6.08%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.73%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.03%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.35%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.35%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.68%
Clay	Environmental → Terrestrial → Soil → Clay	0.68%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.68%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.68%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.68%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.68%
Composting	Engineered → Solid Waste → Grass → Composting	0.68%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	37.16%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.05%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.03%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.35%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.35%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.68%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.68%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.68%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.68%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.68%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.78%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.70%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.03%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.03%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.03%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.03%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.35%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.35%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.35%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.35%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	1.35%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	0.68%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.68%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.68%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.68%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.68%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.68%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.68%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.68%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.68%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.68%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459014	Litter degradation PV2	Engineered	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009444	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010162	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 2)	Host-Associated	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012154	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ037 MetaG	Host-Associated	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030716	Metatranscriptome of soil microbial communities from Risofladan, Vaasa, Finland - OX-2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2PV_02703920	2170459014	Switchgrass, Maize And Mischanthus Litter	LRAFGRALGYDTDKLQEIRRDVMTILTHHAASRAAAYASYGHMLLSRGRE
C688J35102_1184895262	3300002568	Soil	ELCGARWVYDSDPLQEIRRDVMTILTHHAASRQAAYAAYGAHLLGGAAGH*
Ga0062387_1005998422	3300004091	Bog Forest Soil	WVYDSDPLQEIRRDVMTILTHTAASRQAAMAPYGHLLLHRAEG*
Ga0062387_1017773051	3300004091	Bog Forest Soil	LDGARWVYDNDELGSIRRDVMTVLTHAAASRVAGLAPYGRMLLSEGAE*
Ga0062389_1029524852	3300004092	Bog Forest Soil	LSGARWVYDSDPLQEIRRDVLTILTHTAASRQAAMAPYGKLLLEDGR*
Ga0062388_1016407651	3300004635	Bog Forest Soil	LCELDGARWVYDNDELGSIRRDVMTVLTHAAASRVAGLAPYGRMLLSEGAE*
Ga0066388_1040025852	3300005332	Tropical Forest Soil	MDGARWVRDTDELGVIRRDVMTILTHHAASRQAAMAPYGKMLLSRDVR*
Ga0066388_1065072542	3300005332	Tropical Forest Soil	ELDGARWVYDADELGAIRRDVMTILTHHAASRLAAMAPYGKMLLSRDAG*
Ga0070661_1014310992	3300005344	Corn Rhizosphere	YDSDPLQEIRRDIEIILTHHAASRMAAMVPWGQHLLSSAGTQPHDE*
Ga0070707_1004806783	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LSGLDGARWVYDSDALGAIRRDVMTILTHHAASRQAAMAPYGKMLLARDAG*
Ga0070698_1005663813	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	LSGLDGARWVYDSDALGAIRRDVMTILTHHAASRQAAMAPYGRLLLTRDGEG*
Ga0070698_1009593511	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	DGARWVYDSDALGAIRRDVMTILTHHAASRQAAMAPYGRLLLTRDGG*
Ga0070735_104589331	3300005534	Surface Soil	AMERLCELSGARWVYDSDPLQEMRCDVMTILTHFAASRPAAYAAYGHVLLAHGA*
Ga0070684_1006988511	3300005535	Corn Rhizosphere	RLCELSGARSVYDADPLQQIRRDVMTMLTHHAASRMAAYAPYGQSLLRGGSGA*
Ga0066706_109570122	3300005598	Soil	VSWGPFDRLYEMDGARWVYDNDELGAIRRDVMTILTHHAASRQAAMAPYG
Ga0068856_1026220061	3300005614	Corn Rhizosphere	LCGARWTYDSDPLQEIRRDIEIILTHHAASRMAAMVPWGQHLLAPPTAR*
Ga0070712_1009566712	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	CELSGARWVYDSDPLQEIRRDVMTILTHHAASRPAAMAPYGHLLLSHGAG*
Ga0066665_114124041	3300006796	Soil	MDGARWVYDNDALGAIRRDVMTILTHHAVSRQAAMPPDGRLLLSRGGE*
Ga0075420_1019347342	3300006853	Populus Rhizosphere	CGARWTYDSDPLQEIRRDIEIILTHHAASRQAAMVPWGQRLLQPRDV*
Ga0099827_110321222	3300009090	Vadose Zone Soil	LERLCELSGARWLYDNDPLQEIRRDVMTILTHHAASRQAAMVPYGHMLLDRAG*
Ga0066709_1027636311	3300009137	Grasslands Soil	MDGARWVYDSDRLGAIRRDVMTIVTHHAASCQAAMAPYGRMLLARGPG*
Ga0066709_1037544232	3300009137	Grasslands Soil	WVYDSDPLQEIRRDVMTILTHHAASRQAAMAPYGHMLLSHRAG*
Ga0114945_108633062	3300009444	Thermal Springs	CELSGARWVYDSDPLQEIRRDVMTILTHHAASRQAAMAPYGHMLLSRAAE*
Ga0126380_114520501	3300010043	Tropical Forest Soil	EIDGARWVYDNDELGTIRRDVMTILTHHAASRQAAMAPYGKMLLTRHAG*
Ga0126382_115827442	3300010047	Tropical Forest Soil	DGARWVYDADELGAIRRDVMTILTHHAASRLAAMAPYGKMLLSRDAG*
Ga0131853_107940011	3300010162	Termite Gut	LCEVDGARWVYDNDQLGAIRRDVMTILTHHAASRQAAMAPYGRMLLQQRRAEVGSR*
Ga0134082_100605241	3300010303	Grasslands Soil	RLSELSGARWVYDADPLQEIRRDVMTILTHHAASRAAAYAPYGNMLLSRGRD*
Ga0074044_100934292	3300010343	Bog Forest Soil	VDGARWVYDGDELGAIRRDVMTILIHHAASRQAAMAPYGRMLLARAA*
Ga0074044_104058163	3300010343	Bog Forest Soil	DRLCELDGARWVYDSDELGAIRRDVMTILTHHAASRQAAMAPYGRMLLTRDRG*
Ga0126378_101139583	3300010361	Tropical Forest Soil	SVYDGDPLQEIRRDLTTVLTHTAASRVAAMVPYGHMLLSRPAE*
Ga0126378_128843211	3300010361	Tropical Forest Soil	WVYDTDPLQKIRRDVMTILTHHAASRQAAMVPYGRLLLDRDPAAPWPR*
Ga0126381_1000597083	3300010376	Tropical Forest Soil	MDGARWVYDNDEIGAIRRDVMTILTHHAASPTRRWPPPYGKMLITRDAA*
Ga0126381_1000748845	3300010376	Tropical Forest Soil	VYDQDKLGAIRRDLMTILTHTAASRQAAMAPYGHMLLNHSPG*
Ga0126381_1006132231	3300010376	Tropical Forest Soil	RWVYDSDELGAIRRDVMTILTHHAASRQAAMAPYGKMLLARDMR*
Ga0126381_1006924582	3300010376	Tropical Forest Soil	LDRLCEMDGARWVYDSDQLGAIRRDVMTILTHHAASRQAAMAPYGKMLLTRELR*
Ga0126381_1014051691	3300010376	Tropical Forest Soil	MRDGWRALGYDNDELGAIRRNVMTILTHHAASRQAAMAPYGKMLLTRDVR*
Ga0126381_1025988092	3300010376	Tropical Forest Soil	VYDNDELGAIRRDVMTILTHHAASRQAAMAPYGKMLLAYGQE*
Ga0126383_131929833	3300010398	Tropical Forest Soil	VDRLCEMDGARWVYDNDQLGGIRRDVMTILTHHAASLQAAMAPYGKMLLNHGAW*
Ga0134127_125033762	3300010399	Terrestrial Soil	YDSDPLQEIRRDIEIILTHHAASRMAAMVPWGQHLLSSAGTPP*
Ga0137391_104373252	3300011270	Vadose Zone Soil	LDGARWVYDRDELGAIRRDVMTILTHHAASRQAAMAPYGRLLLARDAG*
Ga0137433_11336331	3300011440	Soil	ARWVYDTDPLQEFRRDVMTILTHHAASRQAAMAPYGHMLLSRGSE*
Ga0137389_113210442	3300012096	Vadose Zone Soil	ARWLYDNDPLQEIRRDVMTILTHHAASRQAAMVPYGRMLLDRTAG*
Ga0153953_10752132	3300012154	Attine Ant Fungus Gardens	LCEVDGARWVYDSDALGAIRRDVMTILTHHAASRAAAMAPYGRALLTGGH*
Ga0137363_101594826	3300012202	Vadose Zone Soil	RWVYDSDALGAIRRDVMTILTHHAASRKAAMAPYGRLLLAREY*
Ga0137381_103351231	3300012207	Vadose Zone Soil	ERLCESSGARWVYDTDPLQEIRRDVMTILTHHAASRQAAMVPYGRMLLGQDPK*
Ga0137379_103732863	3300012209	Vadose Zone Soil	LCESSGARWVYDTDPLQEIRRDVMTILTHHAASRQAAMVPYGRMLLGQDPK*
Ga0150985_1015711224	3300012212	Avena Fatua Rhizosphere	SGARWVYETDPLQEIRRDVMTILTHHAASRAAAFAPYGHMLLRQGRE*
Ga0150985_1075300232	3300012212	Avena Fatua Rhizosphere	RLCELNGARWVYDSDELGAIRRDVMTILTHHAASRQAAMAPYGRMLLKTGGR*
Ga0150985_1167957293	3300012212	Avena Fatua Rhizosphere	CGARWVYDSDPLQEIRRDVMTILTHHAANRQAAYAPYGSLLLGNAAGH*
Ga0137360_100358394	3300012361	Vadose Zone Soil	GARWVYDNDELGAIRRDVMTILTHHAASRQAAMAPYGRLLLAREY*
Ga0137361_103425701	3300012362	Vadose Zone Soil	DGARWVYDNDELGAIRRDVMTILTHHAASRQAAMAPYGRLLLAREAG*
Ga0137361_108610031	3300012362	Vadose Zone Soil	ELSGARWLYDSDPLQEIRRDVMTILTHHAASRQAAMVPYGHLLLDRAAG*
Ga0137390_105235181	3300012363	Vadose Zone Soil	LDRLCELDGARWVYDSDELGAIRRDVMTILTHHAASRQAAMAPYGRMLLARDAE*
Ga0137390_117252602	3300012363	Vadose Zone Soil	CELSGARWLYDNDPLQEIRRDVMTILTHHAASRQAAMVPYGHMLLDRARG*
Ga0137398_101133983	3300012683	Vadose Zone Soil	LERLCELSGARWVYDTDPLQEIRRDVMTILTHHTASRAAAYAPYGNMLLSRSRD*
Ga0137396_110688422	3300012918	Vadose Zone Soil	ACRVYDNDELGAIRRDVMTILTHHAASRQAAMALYGKMLLARNPG*
Ga0137394_101624555	3300012922	Vadose Zone Soil	CELDGARWVYDSDELGAIRRDVMTILTDHAASRQAAMAPYGKMLLSRGAG*
Ga0137359_108034741	3300012923	Vadose Zone Soil	RLCELSGARWVYDSDPLQEIRRDVMTILTHHAASRPAAMAPYGHLLLSRGAG*
Ga0137416_113940231	3300012927	Vadose Zone Soil	SGARWVYDTDPLQEIRRDVMTILTHHAASRAAAYAPYGNMLLSRGRD*
Ga0137404_111799601	3300012929	Vadose Zone Soil	LVYDNDELGAIRRDVMTILTHHAASRQAAMAPYGRLLLARDSG*
Ga0137407_112294462	3300012930	Vadose Zone Soil	LVYDNDELGAIRRDVMTILTHHAASRQAAMAPYGRLLLARDAG*
Ga0134081_104206452	3300014150	Grasslands Soil	ERLCELSGARWVYDTDPLQEIRRDIMTILTHHAASRAAAYAPYGNMLLSRGRD*
Ga0137403_102339821	3300015264	Vadose Zone Soil	CEMDGARWVYDSDELGAIRRDVMTILTHHAASRQAAMAPYGRLLLSPDAA*
Ga0137403_102339823	3300015264	Vadose Zone Soil	MLGLPGARWVYDSDELGAIRRDVMTILTHHAASRQAAMAPYGRLLLTRGAG*
Ga0132256_1024733042	3300015372	Arabidopsis Rhizosphere	SGARWVYDSDPLQEIRRDVMTIVTHHAASRPAAMAAYGHLLLSQFSGR*
Ga0182033_105019833	3300016319	Soil	DRLCELDGARWVYDNDQLGAIRRDVMTILTHHAASRQAAMAPYGKMLLAHDAG
Ga0182035_105003233	3300016341	Soil	LAGSALDRLCDLDGARWVYDTDALGAIRRDVMTILTHHAASRQAAMA
Ga0182035_106971722	3300016341	Soil	LCELDGARWVYDRDALGAIRRDVMTILTHHAASRQAAMAPYGKMLLTRDLR
Ga0182035_116180851	3300016341	Soil	LCELSGARWVYDTEALQEVRRDVMTILTHHAASRQAAMVPYGRMLLGQHPK
Ga0182034_119836092	3300016371	Soil	DKLCEMDGARWVYDNDQLGTIRRDVMTILTHHAASRQAAMAPYGKMLLTRGAG
Ga0182038_101862402	3300016445	Soil	VYDHDELGTIRRDVMTILTHHAASRQAAMAPYGKMLLGRGPE
Ga0187817_111101681	3300017955	Freshwater Sediment	ERLCELSGARWVYDSDKLQEIRRDVMTIITHHAASRPAAYAPYGQMLLSGDR
Ga0187815_100098105	3300018001	Freshwater Sediment	YDSDPLQEIRRDVMTILTHHAASRQAAMAPYGHMLLDRAGQ
Ga0187784_101376271	3300018062	Tropical Peatland	WVYDSDPLQEIRRDVMTILTHTAASRQAAMAPYGHLLLHRAEE
Ga0066669_117380671	3300018482	Grasslands Soil	WVYGSDPLQEIRCDVMTILTHHAASRPAAMAPYGQLLLRQGAGE
Ga0210407_103289943	3300020579	Soil	RLCEMDGARWVYDSDELGAIRRDVMTILTHHAASRQAAMAPYGKMLLTRDLG
Ga0210403_105469421	3300020580	Soil	VIGGARGVYDSDELGAIRRDVMTILTHHAASRQAAMAPYGRLLLSREN
Ga0210403_110321171	3300020580	Soil	WVYDSDELGAIRRDVMTILTHHAASRQAAMAPYGKMLLTRDAA
Ga0210399_115610631	3300020581	Soil	VIGGARGVYDSDELGAIRRDVMTILTHHAASRQAAMAPYGKMLLTRAG
Ga0210405_102605023	3300021171	Soil	ELSGARWVYDSDPLQEIRRDVMTILTHHAASRPAAFAPYGHMLLTQGA
Ga0210408_104731551	3300021178	Soil	CELDGARWVYDDDQLGAIRRDVMTILTHHAASRQAVMAPYGKMLLTRDTE
Ga0210386_113986991	3300021406	Soil	DGARWVYDSDALGAIRRDVMTILTHHAASRQAAMAPYGKLLLSRDTK
Ga0187846_100687113	3300021476	Biofilm	VSGGWALDRLCELDGARWVYDSDALGAIRRDVMTILTHHAASRQAAMA
Ga0187846_104448421	3300021476	Biofilm	ARWVYDGDALGAIRRDVMTILTHHAASRQAAMAPYGKMLLTRDAG
Ga0210402_120128631	3300021478	Soil	LDGARWVYDSDELGAIRRDVMTILTHHAASRQAAMAPYGKLLLTRQPG
Ga0126371_105039722	3300021560	Tropical Forest Soil	VYEIEGGRWVYDRDKLGAIRRDVMTILTHHAASRQAAMTPYGKMLLARGQQ
Ga0126371_108704462	3300021560	Tropical Forest Soil	YDNDELGAIRRDVMTILTHHAASRQAAMAPYGKMLLTRHAGGTLGRCA
Ga0126371_125258721	3300021560	Tropical Forest Soil	ARWVYDTDELGAIRRDLMTILTHHAASRQAAMAPYGKMLLLSVDAG
Ga0126371_136135212	3300021560	Tropical Forest Soil	AVDRLCERDGARWVYDSDALGAARRDVMTILTHHAASRQAAMAPYGKMLLGNNAG
Ga0228598_10875932	3300024227	Rhizosphere	RLCEADGARWVYDNDRLGAIRRDVMTILTHHAASRQAAMAPYGRMLLAHQGGG
Ga0209154_12035521	3300026317	Soil	SGARWVYDTDPLQEIRRDVMTILTHHAASRAAAYAPYGNMLLSRGRD
Ga0209471_11216141	3300026318	Soil	ERLCELSGARWVYDSDPLQEIRRDVMTILTHHAASRPAAMAPYGHLLLQDGRE
Ga0209040_102018223	3300027824	Bog Forest Soil	LCEMDGARWVYDSDQLGAIRRDVMTILTHHAASRQAAMAPYGKMLLAHDAG
Ga0209166_102861333	3300027857	Surface Soil	ARWVYDSDPLQEIRRDVMTILTHHAASRPAAFAPYGHMLLSQGA
Ga0209590_110141462	3300027882	Vadose Zone Soil	RLCELSGARWVYDTDPLQEIRRDVMTILTHHAASRQAAMVPYGRMLLGQDPK
Ga0209488_106849861	3300027903	Vadose Zone Soil	GARWVYDSDALGAIRRDVMTILTHHAASRQAAMAPYGRLLLSRDAG
Ga0209168_103210133	3300027986	Surface Soil	WAMERLCELSGARWVYDSDPLQEMRCDVMTILTHFAASRPAAYAAYGHVLLAHGA
Ga0308309_117227611	3300028906	Soil	VYDSDPLQEIRRDVMTILTHHAASRPAAFAPYGHMLMAHGARR
Ga0222749_106912741	3300029636	Soil	DRLCELDGARWVYDNDQLGAIRRDVMTILTHHAASRQAAMAPYGKMLLTRDTE
Ga0307920_1158172	3300030716	Soil	ALERLCELSGARWVYDSDRLQEMRRDVMTILTHHAANRPAAYAPYGQMLMGGAG
Ga0265460_118254622	3300030740	Soil	WAIDRLCELDGARWVYDNDELGSIRRDVMTVLTHTAASRVAGLAPYGRMLLNDSAE
Ga0308206_11093901	3300030903	Soil	WVYDTDPLQEIRRDVMTILTHHAASRQAAMAPYGHMLLSRSGE
Ga0170834_1098212582	3300031057	Forest Soil	VIGGARWVYDSDELGAIRRDVMTILTHHAASRQAAMAPYGKMLLTR
Ga0170824_1158483092	3300031231	Forest Soil	VIGGARWVYDSDELGAIRRDVMTILTHHAASRQAAMAPYGKMLLTRSG
Ga0170820_113714671	3300031446	Forest Soil	MDGARWVYDSDELGAIRRDVMTILTHHAASRQAAMAPYGKMLFAREAG
Ga0170820_163820521	3300031446	Forest Soil	LDKLCDLDGARWVYDNDQLGAIRRNVMTILTHHAASRQAAMAPYGKMLLTRAG
Ga0318541_101236121	3300031545	Soil	VYDSDELGAIRRDVMTILTHHAASRQAAMAPYGKMLLSGGGR
Ga0318541_102105232	3300031545	Soil	GARWLYDTDPLQEIRRDVMTILTHHAASRQSAMVPYGRMLLGQHPK
Ga0318538_100273081	3300031546	Soil	VYDSDSLGAIRRDVMTILTHHAASRQAAMAPYGKMLLAHDAG
Ga0318528_101969222	3300031561	Soil	LDGARWVYDTDALGAIRRDVMTILTHHAASRQAAMAPYGKMLARDLR
Ga0318528_104990891	3300031561	Soil	MDGARWVYDNDQLGAIRRDVMTILTHHAASRQAAMAPYGRMLLASGAG
Ga0318542_104055342	3300031668	Soil	GARWDYDSDSLGAIRRDVMTILTHHAASRQAAMAPYGKMLLAHDAG
Ga0318572_103413532	3300031681	Soil	ALDRLCELDGARWVYDRDALGAIRRDVMTILTHHAASRQAAMAPYGKMLLGRGPE
Ga0310686_1061756592	3300031708	Soil	RWVYDNDELGSIRRDVMTVLTHTAASRVAGLAPYGRMLLNDDAE
Ga0310686_1100698301	3300031708	Soil	RLCELDGARWVYDNDELGSIRRDVMTVLTHTAASRVAGLAPYGRMLLNDGAE
Ga0310686_1102629853	3300031708	Soil	DGARWVYDNDELGSIRRDVMTVLTHTAASRVAGLAPYGRMLLSDGAE
Ga0306917_103708634	3300031719	Soil	CEMDGARWVYDSDELGAIRRDVMTILTHHAASRQAAMAPYGKMLLSGGGR
Ga0306917_104505701	3300031719	Soil	RWVYDDDELGSIRRDVMTVLTHTAASRVAGLAPYGRMLLSDGDA
Ga0318493_104403561	3300031723	Soil	LDKLCEMDGARWVYDNDQLGTIRRDVMTILTHHAASRQAAMAPYGKMLLTRGAG
Ga0318502_104060851	3300031747	Soil	VYDNDQLGAIRRDVMTILTHHAANRQAAMAPYGKMLLTGDAG
Ga0307475_103560383	3300031754	Hardwood Forest Soil	RLCELDGARWVYDNDQLGAIRRDVMTILTHHAASRQAAMAPYGRLLLAGAG
Ga0318537_100465764	3300031763	Soil	RWVYDNDQLGAIRRDVMTILTHHAASRQATMAPYGRMLLTRDQE
Ga0318509_104141711	3300031768	Soil	LCDLDGARWVYDTDALGAIRRDVMTILTHHAASRQAAMAPYGKMLARDLR
Ga0318498_103408331	3300031778	Soil	ARWVYDSDELGAIRRDVMTILTHHAASRQAAMAPYGKMLLTREG
Ga0318499_102289753	3300031832	Soil	RWVYDNDQLGAIRRDVMTILTHHAANRQAAMAPYGKMLLTGDAG
Ga0318517_102117991	3300031835	Soil	VYDRDELGAIRRDVMTILTHHAASRQAAMAPYGKMLLARGQA
Ga0318512_102135732	3300031846	Soil	VYDNDQLGTIRRDVMTILTHHAASRQAAMAPYGKMLLTRGAG
Ga0306925_100327586	3300031890	Soil	ELDGARWVYNRDKLGAIRRDVMTILTHHAASRQAAMAPYGRMLLAQGGV
Ga0318551_103845293	3300031896	Soil	ALDRLCEMDGARWVYDRDELGATRRDVMTILTHHAASRQAAMAPYGRMLLTSDAE
Ga0318520_109264291	3300031897	Soil	VYDNDQLGAIRRDVMTILTHHAASRHAMAPYGKLLLTRGGG
Ga0310916_111965832	3300031942	Soil	ELLCELDGARWVYDKDELGTIRRDVMTILTHHAASRQAAMAPYGKMLLTRGQA
Ga0310909_104572273	3300031947	Soil	WVYDRDALGAIRRDVMTILTHHAASRQAAMAPYGKMLLGRGPE
Ga0306926_129663921	3300031954	Soil	DGARWVYDNDELGTIRRDVMTILTHHAASRQAAMAPYGKMLLTGDRG
Ga0318545_100142614	3300032042	Soil	AVDRLCELDGARWVYDNDQLGAIRRDVMTILTHHAASRQATMAPYGRMLLTRDQE
Ga0318545_100801293	3300032042	Soil	MDGARWVYDNDRLGAIRRDVMTIQTHHAASRQAAMAPYGKMLLTRDPR
Ga0318533_105225942	3300032059	Soil	EMDGARWVYDNDQLGAIRRDVMTILTHHAASRQAAMAPYGKMLLTRRVG
Ga0318505_104396193	3300032060	Soil	LDGARWVYDRDALGAIRRDVMTILTHHAASRQAAMAPYGKMLLTRDVR
Ga0318540_102221701	3300032094	Soil	LAGSALDRLCDLDGARWVYDTDALGAIRRDVMTILTHHAASRQAAMAPYG
Ga0306920_1001344484	3300032261	Soil	LAGARWVYDSDELGAIRRDVMTILTHHAASRQAAMAPYGKMLLTREG
Ga0306920_1014127312	3300032261	Soil	MDGARWVYDNDQLGAVRRDVMTILTHHAASRQAATAPYGRTLLAHDAG
Ga0306920_1025307153	3300032261	Soil	RLCEMDGARWVYDNDELGTIRRDVMTILTHHAASRQAAMAPYGKMLLTGDRG
Ga0348332_119314352	3300032515	Plant Litter	WVYDNDELGSIRRDMMTVLTHTAASRVAGLAPYGRMLLNDGAE
Ga0335074_115204752	3300032895	Soil	MERLCELSGARWVYDSDPLQEMRRDVMTILTHHAANRPAAFAPYGQMLLSRV
Ga0335075_117149891	3300032896	Soil	MERLCELSGARWVYDSDPLQEMRRDVMTILTHHAASRPAAYAPYGQMLLSHTGA
Ga0335072_115173601	3300032898	Soil	WVYDSDPLQEMRRDVMTILTHHAASRPAAFAPYGQMLLNRAGT
Ga0310914_102375902	3300033289	Soil	MDGARWVYDRDELGATRRDVMTILTHHAASRQAAMAPYGRMLLTSDAE
Ga0310914_107698111	3300033289	Soil	ERLCELDGARWVYDSDQLGAIRRDVMTILTHHAASRQAAMAPYGKMLLLTHTGRI
Ga0310914_112715791	3300033289	Soil	LCELDGARWVYDSDRLGAIRRDVMTILTHHAASRQAAMAPYGHMLLTRDAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F048454

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences