Metagenome / Metatranscriptome Family F048617

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F048617
Family Type	Metagenome / Metatranscriptome
Number of Sequences	148
Average Sequence Length	46 residues
Representative Sequence	ALLQAKPTNNAKGDWLASSADGSSVTMRPFMNIDKESYSTYVLLKS
Number of Associated Samples	131
Number of Associated Scaffolds	148

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.68 %
% of genes near scaffold ends (potentially truncated)	97.97 %
% of genes from short scaffolds (< 2000 bps)	91.89 %
Associated GOLD sequencing projects	122
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.622 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.568 % of family members)
Environment Ontology (ENVO)	Unclassified (27.027 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.108 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 14.86% Coil/Unstructured: 85.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 148 Family Scaffolds
PF14559	TPR_19	20.95
PF13428	TPR_14	16.89
PF13432	TPR_16	12.16
PF13414	TPR_11	10.14
PF09295	ChAPs	2.70
PF00515	TPR_1	2.70
PF13181	TPR_8	2.03
PF00248	Aldo_ket_red	1.35
PF13669	Glyoxalase_4	1.35
PF05960	DUF885	1.35
PF01625	PMSR	1.35
PF13531	SBP_bac_11	0.68
PF07593	UnbV_ASPIC	0.68
PF03928	HbpS-like	0.68
PF10518	TAT_signal	0.68
PF07719	TPR_2	0.68
PF13517	FG-GAP_3	0.68
PF01263	Aldose_epim	0.68

COG ID	Name	Functional Category	% Frequency in 148 Family Scaffolds
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	1.35
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	1.35
COG0676	D-hexose-6-phosphate mutarotase	Carbohydrate transport and metabolism [G]	0.68
COG2017	Galactose mutarotase or related enzyme	Carbohydrate transport and metabolism [G]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.62 %
Unclassified	root	N/A	3.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.62 %
Unclassified	root	N/A	3.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.62 %
Unclassified	root	N/A	3.38 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	72.97 %
Unclassified	root	N/A	3.38 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.03 %
Chrysiogenetes	phylum	All Organisms → cellular organisms → Bacteria → Chrysiogenetes	0.68 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	24.32 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	11.49 %
Unclassified	root	N/A	3.38 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2.03 %
Chrysiogenetes	class	All Organisms → cellular organisms → Bacteria → Chrysiogenetes → Chrysiogenetes	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.32 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	10.81 %
Unclassified	root	N/A	3.38 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	2.03 %
Chrysiogenales	order	All Organisms → cellular organisms → Bacteria → Chrysiogenetes → Chrysiogenetes → Chrysiogenales	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.32 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10.81 %
Unclassified	root	N/A	3.38 %
Verrucomicrobia bacterium ADurb.Bin122	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin122	2.03 %
unclassified Chrysiogenales	no rank	All Organisms → cellular organisms → Bacteria → Chrysiogenetes → Chrysiogenetes → Chrysiogenales → unclassified Chrysiogenales	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.32 %
Unclassified	root	N/A	3.38 %
Verrucomicrobia bacterium ADurb.Bin122	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin122	2.03 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.68 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.68 %
Chrysiogenales bacterium	species	All Organisms → cellular organisms → Bacteria → Chrysiogenetes → Chrysiogenetes → Chrysiogenales → unclassified Chrysiogenales → Chrysiogenales bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.32 %
Unclassified	root	N/A	3.38 %
Verrucomicrobia bacterium ADurb.Bin122	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin122	2.03 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.68 %
Granulicella cerasi	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella cerasi	0.68 %
Chrysiogenales bacterium	species	All Organisms → cellular organisms → Bacteria → Chrysiogenetes → Chrysiogenetes → Chrysiogenales → unclassified Chrysiogenales → Chrysiogenales bacterium	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_12830375	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	539	Open in IMG/M
3300001082\|JGI12664J13189_1011467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300001356\|JGI12269J14319_10137052	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1083	Open in IMG/M
3300001979\|JGI24740J21852_10141164	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300003368\|JGI26340J50214_10171966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300004082\|Ga0062384_100477389	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	821	Open in IMG/M
3300004082\|Ga0062384_101466554	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	504	Open in IMG/M
3300004092\|Ga0062389_100420271	All Organisms → cellular organisms → Bacteria	1462	Open in IMG/M
3300004092\|Ga0062389_101765173	All Organisms → cellular organisms → Bacteria → Acidobacteria	799	Open in IMG/M
3300004633\|Ga0066395_10179370	All Organisms → cellular organisms → Bacteria → Acidobacteria	1095	Open in IMG/M
3300004633\|Ga0066395_10279756	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	905	Open in IMG/M
3300005184\|Ga0066671_10235900	All Organisms → cellular organisms → Bacteria → Acidobacteria	1119	Open in IMG/M
3300005186\|Ga0066676_10234698	All Organisms → cellular organisms → Bacteria → Acidobacteria	1192	Open in IMG/M
3300005436\|Ga0070713_101163249	All Organisms → cellular organisms → Bacteria → Acidobacteria	746	Open in IMG/M
3300005529\|Ga0070741_10723216	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	876	Open in IMG/M
3300005530\|Ga0070679_100934461	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	811	Open in IMG/M
3300005535\|Ga0070684_102053978	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300005542\|Ga0070732_10424208	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300005542\|Ga0070732_10562529	All Organisms → cellular organisms → Bacteria → Acidobacteria	692	Open in IMG/M
3300005598\|Ga0066706_11117862	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300005602\|Ga0070762_10241957	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1119	Open in IMG/M
3300005602\|Ga0070762_10906290	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300005614\|Ga0068856_100198854	All Organisms → cellular organisms → Bacteria	2019	Open in IMG/M
3300005712\|Ga0070764_10207557	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1101	Open in IMG/M
3300005764\|Ga0066903_103778132	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300005764\|Ga0066903_104883695	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300005876\|Ga0075300_1049662	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300005899\|Ga0075271_10121024	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300005921\|Ga0070766_11131121	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300006028\|Ga0070717_10488408	All Organisms → cellular organisms → Bacteria → Acidobacteria	1112	Open in IMG/M
3300006028\|Ga0070717_11444663	Not Available	624	Open in IMG/M
3300006052\|Ga0075029_100006139	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6628	Open in IMG/M
3300006052\|Ga0075029_100914135	All Organisms → cellular organisms → Bacteria → Acidobacteria	602	Open in IMG/M
3300006059\|Ga0075017_100258171	All Organisms → cellular organisms → Bacteria	1276	Open in IMG/M
3300006162\|Ga0075030_100935958	All Organisms → cellular organisms → Bacteria → Acidobacteria	683	Open in IMG/M
3300006163\|Ga0070715_10114629	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1276	Open in IMG/M
3300006172\|Ga0075018_10323041	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	767	Open in IMG/M
3300006176\|Ga0070765_100704735	All Organisms → cellular organisms → Bacteria → Acidobacteria	953	Open in IMG/M
3300006800\|Ga0066660_10759895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	791	Open in IMG/M
3300009012\|Ga0066710_104412796	Not Available	526	Open in IMG/M
3300009029\|Ga0066793_10857829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300009174\|Ga0105241_10497362	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300009638\|Ga0116113_1197047	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300009792\|Ga0126374_10201114	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1260	Open in IMG/M
3300009792\|Ga0126374_11120920	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300010043\|Ga0126380_10024437	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2961	Open in IMG/M
3300010046\|Ga0126384_10391829	All Organisms → cellular organisms → Bacteria → Acidobacteria	1170	Open in IMG/M
3300010359\|Ga0126376_11418529	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720	Open in IMG/M
3300010366\|Ga0126379_10484619	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1305	Open in IMG/M
3300010376\|Ga0126381_101222827	All Organisms → cellular organisms → Bacteria → Acidobacteria	1086	Open in IMG/M
3300010376\|Ga0126381_103890421	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300010398\|Ga0126383_12315321	All Organisms → cellular organisms → Bacteria → Acidobacteria	623	Open in IMG/M
3300011269\|Ga0137392_10082132	All Organisms → cellular organisms → Bacteria	2503	Open in IMG/M
3300012211\|Ga0137377_10512147	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1138	Open in IMG/M
3300012354\|Ga0137366_10497999	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin122	880	Open in IMG/M
3300012930\|Ga0137407_11130281	All Organisms → cellular organisms → Bacteria → Acidobacteria	743	Open in IMG/M
3300013306\|Ga0163162_12546478	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300013307\|Ga0157372_10410624	All Organisms → cellular organisms → Bacteria	1578	Open in IMG/M
3300014150\|Ga0134081_10389475	Not Available	520	Open in IMG/M
3300014165\|Ga0181523_10822893	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella cerasi	505	Open in IMG/M
3300014654\|Ga0181525_10150418	All Organisms → cellular organisms → Bacteria → Acidobacteria	1276	Open in IMG/M
3300015371\|Ga0132258_10480251	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3104	Open in IMG/M
3300015372\|Ga0132256_100062389	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3503	Open in IMG/M
3300015372\|Ga0132256_100804672	All Organisms → cellular organisms → Bacteria → Acidobacteria	1056	Open in IMG/M
3300016270\|Ga0182036_10529398	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300016341\|Ga0182035_11678889	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin122	574	Open in IMG/M
3300017928\|Ga0187806_1294674	All Organisms → cellular organisms → Bacteria → Acidobacteria	571	Open in IMG/M
3300017970\|Ga0187783_11379927	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300018040\|Ga0187862_10286106	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300018044\|Ga0187890_10310522	All Organisms → cellular organisms → Bacteria → Chrysiogenetes → Chrysiogenetes → Chrysiogenales → unclassified Chrysiogenales → Chrysiogenales bacterium	885	Open in IMG/M
3300018085\|Ga0187772_10913332	All Organisms → cellular organisms → Bacteria → Acidobacteria	638	Open in IMG/M
3300018090\|Ga0187770_10573726	All Organisms → cellular organisms → Bacteria → Acidobacteria	896	Open in IMG/M
3300018482\|Ga0066669_10871849	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	803	Open in IMG/M
3300020579\|Ga0210407_10340549	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
3300020581\|Ga0210399_10243993	All Organisms → cellular organisms → Bacteria → Acidobacteria	1497	Open in IMG/M
3300020581\|Ga0210399_11518475	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300020583\|Ga0210401_10596620	All Organisms → cellular organisms → Bacteria → Acidobacteria	966	Open in IMG/M
3300020583\|Ga0210401_11432902	All Organisms → cellular organisms → Bacteria → Acidobacteria	548	Open in IMG/M
3300021088\|Ga0210404_10201628	All Organisms → cellular organisms → Bacteria → Acidobacteria	1067	Open in IMG/M
3300021171\|Ga0210405_10486078	All Organisms → cellular organisms → Bacteria → Acidobacteria	968	Open in IMG/M
3300021178\|Ga0210408_10711060	All Organisms → cellular organisms → Bacteria → Acidobacteria	791	Open in IMG/M
3300021180\|Ga0210396_10115416	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2424	Open in IMG/M
3300021180\|Ga0210396_11119337	All Organisms → cellular organisms → Bacteria → Acidobacteria	662	Open in IMG/M
3300021180\|Ga0210396_11700311	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300021181\|Ga0210388_11366229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300021404\|Ga0210389_11551603	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300021406\|Ga0210386_10238677	All Organisms → cellular organisms → Bacteria → Acidobacteria	1548	Open in IMG/M
3300021407\|Ga0210383_10806885	All Organisms → cellular organisms → Bacteria → Acidobacteria	803	Open in IMG/M
3300021420\|Ga0210394_10071181	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3013	Open in IMG/M
3300021420\|Ga0210394_11805679	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300021433\|Ga0210391_10004395	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11748	Open in IMG/M
3300021478\|Ga0210402_10828499	All Organisms → cellular organisms → Bacteria → Acidobacteria	851	Open in IMG/M
3300021479\|Ga0210410_10145094	All Organisms → cellular organisms → Bacteria	2114	Open in IMG/M
3300021559\|Ga0210409_10990995	All Organisms → cellular organisms → Bacteria → Acidobacteria	715	Open in IMG/M
3300024331\|Ga0247668_1068670	All Organisms → cellular organisms → Bacteria → Acidobacteria	716	Open in IMG/M
3300025906\|Ga0207699_11113036	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300025911\|Ga0207654_11023107	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300025929\|Ga0207664_11815465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300027535\|Ga0209734_1104612	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300027545\|Ga0209008_1068726	All Organisms → cellular organisms → Bacteria → Acidobacteria	800	Open in IMG/M
3300027609\|Ga0209221_1131025	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300027629\|Ga0209422_1019449	All Organisms → cellular organisms → Bacteria → Acidobacteria	1686	Open in IMG/M
3300027667\|Ga0209009_1056100	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	986	Open in IMG/M
3300027842\|Ga0209580_10084441	All Organisms → cellular organisms → Bacteria → Acidobacteria	1522	Open in IMG/M
3300027842\|Ga0209580_10284749	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300027879\|Ga0209169_10266380	All Organisms → cellular organisms → Bacteria → Acidobacteria	898	Open in IMG/M
3300027895\|Ga0209624_10464732	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin122	843	Open in IMG/M
3300027911\|Ga0209698_11396063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300027915\|Ga0209069_10729238	All Organisms → cellular organisms → Bacteria → Acidobacteria	585	Open in IMG/M
3300028047\|Ga0209526_10185714	All Organisms → cellular organisms → Bacteria → Acidobacteria	1445	Open in IMG/M
3300028745\|Ga0302267_10393234	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300028748\|Ga0302156_10117676	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1326	Open in IMG/M
3300028906\|Ga0308309_11898728	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300029636\|Ga0222749_10450513	All Organisms → cellular organisms → Bacteria → Acidobacteria	689	Open in IMG/M
3300029882\|Ga0311368_10933283	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
3300030007\|Ga0311338_11352160	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300030057\|Ga0302176_10422564	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300030509\|Ga0302183_10219650	All Organisms → cellular organisms → Bacteria → Acidobacteria	740	Open in IMG/M
3300030617\|Ga0311356_11277391	All Organisms → cellular organisms → Bacteria → Acidobacteria	672	Open in IMG/M
3300030618\|Ga0311354_10256374	All Organisms → cellular organisms → Bacteria → Acidobacteria	1833	Open in IMG/M
3300030760\|Ga0265762_1018178	All Organisms → cellular organisms → Bacteria → Acidobacteria	1282	Open in IMG/M
3300030906\|Ga0302314_11899967	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300031094\|Ga0308199_1092198	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300031198\|Ga0307500_10118418	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300031231\|Ga0170824_126983241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	879	Open in IMG/M
3300031708\|Ga0310686_107231145	All Organisms → cellular organisms → Bacteria → Acidobacteria	1512	Open in IMG/M
3300031718\|Ga0307474_10669272	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300031820\|Ga0307473_11256868	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300031912\|Ga0306921_11260838	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	820	Open in IMG/M
3300031954\|Ga0306926_11144866	All Organisms → cellular organisms → Bacteria → Acidobacteria	917	Open in IMG/M
3300031962\|Ga0307479_11597499	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300032001\|Ga0306922_11873345	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300032059\|Ga0318533_11176623	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300032091\|Ga0318577_10582620	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300032180\|Ga0307471_100302080	All Organisms → cellular organisms → Bacteria	1688	Open in IMG/M
3300032205\|Ga0307472_100479379	All Organisms → cellular organisms → Bacteria → Acidobacteria	1066	Open in IMG/M
3300032261\|Ga0306920_103881837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300032782\|Ga0335082_10420895	Not Available	1199	Open in IMG/M
3300032805\|Ga0335078_11724104	All Organisms → cellular organisms → Bacteria → Acidobacteria	686	Open in IMG/M
3300032892\|Ga0335081_10129552	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3664	Open in IMG/M
3300032896\|Ga0335075_10648206	All Organisms → cellular organisms → Bacteria → Acidobacteria	1030	Open in IMG/M
3300032954\|Ga0335083_10184024	All Organisms → cellular organisms → Bacteria → Acidobacteria	1931	Open in IMG/M
3300033433\|Ga0326726_11815985	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300033545\|Ga0316214_1028338	All Organisms → cellular organisms → Bacteria → Acidobacteria	792	Open in IMG/M
3300033808\|Ga0314867_049179	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300033824\|Ga0334840_191480	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300034065\|Ga0334827_081463	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.24%
Host-Associated	Host-Associated	6.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.08%
Aquatic	Environmental → Aquatic	12.16%
Plants	Host-Associated → Plants	6.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.97%
Peat	Environmental → Terrestrial → Peat	8.11%
Freshwater	Environmental → Aquatic → Freshwater	7.43%
Sediment	Environmental → Aquatic → Sediment	4.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.70%
Roots	Host-Associated → Plants → Roots	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.62%
Loam	Environmental → Terrestrial → Soil → Loam	18.24%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.11%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.11%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.73%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.03%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.22%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.84%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.11%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.43%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.73%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.35%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.68%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.68%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.41%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.73%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.73%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.05%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.38%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.38%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.38%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.70%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.70%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.03%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.35%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.35%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.35%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.35%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.35%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.35%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.35%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.35%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.35%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.35%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.68%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.68%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.68%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.68%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.68%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.68%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001082	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001979	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6	Host-Associated	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005876	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_401	Environmental	Open in IMG/M
3300005899	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_302	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027535	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028745	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_3	Environmental	Open in IMG/M
3300028748	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033545	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4	Host-Associated	Open in IMG/M
3300033808	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_20	Environmental	Open in IMG/M
3300033824	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S2 5-9	Environmental	Open in IMG/M
3300034065	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 1-5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_128303751	3300000789	Soil	NGLLQAKATNNKAGDWTATAADGSSVTMRPFMNIDKESYSTYVLLKS*
JGI12664J13189_10114672	3300001082	Forest Soil	LFAMADSQPSFDGNALLQAKPANNATGDWLAMSTDGSRVTMRPFMNIEKENYSTYVMLKS
JGI12269J14319_101370522	3300001356	Peatlands Soil	AKPANNAKGDWLANSADGSSVTMRPFMNIDKESYSTYVLLKA*
JGI24740J21852_101411642	3300001979	Corn Rhizosphere	PIKNDRGDWTATSTSGSEVTMRPFMSIDKESYSTYVQLKS*
JGI26340J50214_101719661	3300003368	Bog Forest Soil	DRNALLQAKATNNATGDWLASSSDGSSVTMRPFMNIDKENYSTYVLLKS*
Ga0062384_1004773891	3300004082	Bog Forest Soil	AKPVNNAEGDWLGKSADGGNVTMRSFMNIDQERYSTYVLLRS*
Ga0062384_1014665542	3300004082	Bog Forest Soil	AKPTNNATADWLASSADGSTVTMRPFMNIDKESYSTYVLLRS*
Ga0062389_1004202711	3300004092	Bog Forest Soil	SQPSFDRRSLLQAKPTNNATADWLASSADGSTVTMRPFMNIDKESYSAYVLLRS*
Ga0062389_1017651732	3300004092	Bog Forest Soil	SQPSFDRRSLLQAKPTNNATGDWLAKSADGSSVTMRPFMNIDKESYSTYVLLKS*
Ga0066395_101793702	3300004633	Tropical Forest Soil	PAFDRKGLLQAQATNHAQGDWMATSADGTRVAMRPFMNIDKEKYSTYVMLKS*
Ga0066395_102797562	3300004633	Tropical Forest Soil	ADAQPSFDRSSLLAAKPTNNATGDWTATSIDGSNITMRPFMNIDKESYSTYVWLKS*
Ga0066671_102359001	3300005184	Soil	VLMAVTESQPTFERSALLQAKPLNNEGGDWVANAADGSSITMRPFMTIDKEGYSTYVLLKS*
Ga0066676_102346982	3300005186	Soil	LMAVTESQPTFERSALLQAKPLNNAGGDWVANAADGSSITMRPFMTIDKEGYSTYVLLKS
Ga0070713_1011632491	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	QPSLEKGSLLKAKPAPSNGKGDWLVTSSDGKPITMRPFMTIDKESYSTYVLLKS*
Ga0070741_107232161	3300005529	Surface Soil	NALLQAKPAKNASGDWVATSADGSEVTMRPFMKIDKESYSTYLRLKT*
Ga0070679_1009344611	3300005530	Corn Rhizosphere	SQPPFERSALLQAKPLNNAGGDWVANAVDGSSITMRPFMTIDKEGYSTYVLLKS*
Ga0070684_1020539781	3300005535	Corn Rhizosphere	PAFDSQALLRAKPIKNDRGDWTATSTSGSEVTMRPFMSIDKESYSTYVQLKS*
Ga0070732_104242081	3300005542	Surface Soil	LLQAKPVSGSKGDLQATSADGSSITMRPFMNIDKESYSTYVALKS*
Ga0070732_105625292	3300005542	Surface Soil	SSFGQNSLLQAKPTNNAKGDWLAKAADGSDVTMRPFMNIDKENYSTYVLLKS*
Ga0066706_111178622	3300005598	Soil	NKAGDWIAQSADGSSISMRPFMNIDKESYSTYVLLQS*
Ga0070762_102419573	3300005602	Soil	GDWSATSADGAQVTMRPFMLIDKESYSTYLRIKS*
Ga0070762_109062902	3300005602	Soil	GDLIANSAEATPVSMRPFMSIDKESYSTYVQLKS*
Ga0068856_1001988543	3300005614	Corn Rhizosphere	DNERGDWVASSVSGSDVTLRPFMKIDKESYSAYVQLKS*
Ga0070764_102075572	3300005712	Soil	NNAAGDWQVTSANGSNITMRPFMNIDKESYSTYLLLKS*
Ga0066903_1037781321	3300005764	Tropical Forest Soil	LQSKPTNNGKGDWVARSVDGSEITMRPFMNIDKENYSTYVLLKT*
Ga0066903_1048836952	3300005764	Tropical Forest Soil	SQPSFERGSLLQAKPVANNDKGDWLVTSTEGKQVTMRPFMTIDKESYSAYVLLKS*
Ga0075300_10496621	3300005876	Rice Paddy Soil	ALLQAKQVNNAGGDWVANAVDGSSITMRPFMTIDKEGYSTYVLLKS*
Ga0075271_101210241	3300005899	Rice Paddy Soil	GDWVATSLDGRQITMRPFMKIDKESYSAYVRINS*
Ga0070766_111311211	3300005921	Soil	SIDLITLLQAKPANNTAGDYMAGSVDGSRIAMRPFMNIDKETYSTYVALKS*
Ga0070717_104884082	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LVLMAVAESQPTFERTALLQAKPLNNAGGDWVANAVDGSSITMRPFMTIDKEGYSTYVLLKS*
Ga0070717_114446632	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LRARAANNERGDWTASSAAGGDVAMRPFIKIDKESYSTYVQIRS*
Ga0075029_1000061394	3300006052	Watersheds	QPTFDRNALLQAKATNNATGDWLASSTDGSSVTMRPFMNIDKETYSSYVMLKS*
Ga0075029_1009141352	3300006052	Watersheds	ALLQAKPANNNPGDWLATSADGSNVTMRPFMNIDKESYSTYVLLKA*
Ga0075017_1002581712	3300006059	Watersheds	NALLQAKATNNATGDWLASSTDGSSVTMRPFMNIDKETYSSYVMLKS*
Ga0075030_1009359581	3300006162	Watersheds	TGDWLASSADGRSIKMRPFMMIDKESYSTYVQLKS*
Ga0070715_101146292	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	KGDWMATSADGSSIAMRPFMNIDKEKYSTYVILKS*
Ga0075018_103230411	3300006172	Watersheds	LQAKSANNKTGDWVATAADGSSVTMRPFMTIDKESYSTYVLLKS*
Ga0070765_1007047351	3300006176	Soil	LLQAKAANNAAGDWQVTSANGSNITMRPFMNIDKESYSTYLLLNQLRIR*
Ga0066660_107598952	3300006800	Soil	ALLQAKPLNNAGGDWVANAADGSSITMRPFMTIDKEGYSTYVLLKS*
Ga0066710_1044127961	3300009012	Grasslands Soil	AELLRARYTSNALGDSTAVSTDGKSITMRPFMNIDKESYNTYVVLKT
Ga0066793_108578292	3300009029	Prmafrost Soil	VADSQPTFDANALLQAKPANNATGDWLASSIGGPSVTMRPFMNIDKESYSTYVLLKA*
Ga0105241_104973621	3300009174	Corn Rhizosphere	DRGDWTASSVSGSEVIMRPFMTIDKESYSTYVQIKS*
Ga0116113_11970471	3300009638	Peatland	LNNAAGDWSATSADGAQVTMRPFMSIDKESYSTYVRLKS*
Ga0126374_102011141	3300009792	Tropical Forest Soil	AIADGQPTFDTNGLLQSKPTNNGKGDWVARSVDGSEITMRPFMNIDKENYSTYVLLKT*
Ga0126374_111209201	3300009792	Tropical Forest Soil	ALLQAKAVNNATGDWTANSADGSRITLRPFMTIDQESYSTYVSLKS*
Ga0126380_100244373	3300010043	Tropical Forest Soil	LQARPTNNAKGDWLANAADGSGVTMRPFMNIDKENYSTYLLLKS*
Ga0126384_103918291	3300010046	Tropical Forest Soil	LVALLNGPVVLFAVADSQPTVERNALLQARPTNNAKGDWLANAADGSGVTMRPFMNIDKENYSTYLLLKS*
Ga0126376_114185291	3300010359	Tropical Forest Soil	PAFDRNALLQARAANSSKGDWIAKSADGSDVTMRPFMNIDKESYSTYVLLKA*
Ga0126379_104846191	3300010366	Tropical Forest Soil	TNGLLQAKPTSNAKGDWMARTVDGSEITMRPFMNIDKENYSTYVSLKT*
Ga0126381_1012228271	3300010376	Tropical Forest Soil	KGDWLATSADGKQITMRPFMTIDKEGYSAYVLLKS*
Ga0126381_1038904212	3300010376	Tropical Forest Soil	MNVAGDWIANATNGSQITMRPFMSIDKESYSTYVRLKS*
Ga0126383_123153211	3300010398	Tropical Forest Soil	SKGLLQAKATNNAKGDWMATSADGNSIAMRPFMNIDKEKYSTYAMLKS*
Ga0137392_100821321	3300011269	Vadose Zone Soil	ELLRSQLSNNAAGDFIANSAEATPVSMRPFMSIDKESYSTYVQLKS*
Ga0137377_105121471	3300012211	Vadose Zone Soil	KASKNAAGDWIADSADGSSVTMRPFMNIDKESYSAYVLLKS*
Ga0137366_104979991	3300012354	Vadose Zone Soil	AESQPAFESRSLLRAKPLNNPKGDWLASSIGGGQITMRPFMTIDKESYSTYVRITS*
Ga0137407_111302811	3300012930	Vadose Zone Soil	PAFDQNALLQAKPTNNNYGDFVATSTNGSSITMRPFMNIDKESYSTYVLLKS*
Ga0163162_125464781	3300013306	Switchgrass Rhizosphere	ALLQAKPVNNAGGDWVANAVDGSSITMRPFMTIDKEGYSSYVLLKS*
Ga0157372_104106241	3300013307	Corn Rhizosphere	KNDRGDWTATSTSGSEVTMRPFMSIDKESYSTYVQLKS*
Ga0134081_103894752	3300014150	Grasslands Soil	LRARHTSNAMGDSAAISTDGKSIIMRPFMSIDKESYNTYVLLKS*
Ga0181523_108228932	3300014165	Bog	FVAQALLHAKPLNNAAGDWSATSADGSRLTMRPFMSIDKESYSTYVRIKS*
Ga0181525_101504181	3300014654	Bog	NALLQAKPTNNPRGDWLVTSSDGSSVTMRPFMNIDRENYSTYVLLKS*
Ga0132258_104802513	3300015371	Arabidopsis Rhizosphere	GDWTASAVDGSSVAMRPFMSIDKESYSTYVLLKS*
Ga0132256_1000623891	3300015372	Arabidopsis Rhizosphere	SQPTFNRGGLLQAKAAKNATGDWLASSSDGSSITMRPFMTIDKETYSTYVQLKS*
Ga0132256_1008046721	3300015372	Arabidopsis Rhizosphere	NNAAGDLIANSADSKPISMRPFMNIDKESYSTYVLLKT*
Ga0182036_105293982	3300016270	Soil	GLLQAKPTNNAKGDWMARTVDGSEITMRPFMNIDKENYSTYVSLKT
Ga0182035_116788892	3300016341	Soil	SGDWSATSADGSHITMRPFMTIDKESYSTYVRINS
Ga0187806_12946742	3300017928	Freshwater Sediment	LQAKPANHSTGDWLATSADGSNVTMRPFMNIDKESYSTYVLLKS
Ga0187783_113799271	3300017970	Tropical Peatland	AKGDFMATSADGSGVAMRPFTNIDQEDYSTCVLFK
Ga0187862_102861061	3300018040	Peatland	AKGDWLANSVDGSSVTMRPFMNIDKESYSTYAVLKS
Ga0187890_103105221	3300018044	Peatland	KPLNNAGGDRVANSIDRGLVTMRPFMTIDKESYSTYVRIRS
Ga0187772_109133322	3300018085	Tropical Peatland	FAVADSQPSFERNALLQAKPANNAAGDWLATSAGGSTVTMRPFMNIDKENYSTYVLLKS
Ga0187770_105737262	3300018090	Tropical Peatland	TGNAAGDSIANSIDGRPISMRPFAGINEENYSTYVKLVS
Ga0066669_108718491	3300018482	Grasslands Soil	NNAGGDWVANAADGSRITMRPFMTIDKEGYSTYVLLKS
Ga0210407_103405491	3300020579	Soil	KGDWLATAADGSTVTMRPFMNIDQESYSTYVLLKG
Ga0210399_102439931	3300020581	Soil	LVLFAVGDSQPTFDQGALLQAKPTPNTTGDWLASSADGSHVTMRPFMNIDKETYSTYVLLKS
Ga0210399_115184752	3300020581	Soil	AIADSQPSFDQNTLLQAKATNNNTGDFLATSVNGTSVTMRPFMNIDKESYSTYVLLKS
Ga0210401_105966201	3300020583	Soil	GGDWVATTVDGRPMTMRPFMSIDKESYSTYVRIKG
Ga0210401_114329021	3300020583	Soil	QAKATNNATGDWIAQSADGSSVSMRPFMNIDKESYSTYVLLKA
Ga0210404_102016281	3300021088	Soil	SALLQAKPTNNTTGDWIAESADGSRVSMRPFMNIDKESYSTYVLLKA
Ga0210405_104860782	3300021171	Soil	ATNNATGDWIAQSADGSSVSMRPFMNIDKESYSTYVLLKA
Ga0210408_107110602	3300021178	Soil	TNNAAGDSIANSVDSKEVSMRPFMSIDKESYSTYVLLKS
Ga0210396_101154161	3300021180	Soil	VLFAVADTQPSFDQNALLQANATNNTTGDFVATSANGSSITMRPFMNIDKESYSTYVLLK
Ga0210396_111193372	3300021180	Soil	NAAGDWQATSANGSNITMRPFMNVDKESYSTYVLLKS
Ga0210396_117003112	3300021180	Soil	QAKPTNNAKGDWTATSADGSTVAMRPFMNIDKESYSTYVLLKS
Ga0210388_113662292	3300021181	Soil	RAVQNAAGDWQANAADGSPVTMRPFMSIDKESYSTYVRLKS
Ga0210389_115516031	3300021404	Soil	AGDWLANAADGSPITMRPFMSIDKESYSTYVRLNA
Ga0210386_102386772	3300021406	Soil	PRNNAAGDWSATTSDGSQVTMRPFMSIDKETYSAYVRLKS
Ga0210383_108068851	3300021407	Soil	SFDRNTLLQAKPTNNASGDWLADSADGSRVTMRPFMNIDKENYSTYVVLKS
Ga0210394_100711811	3300021420	Soil	ATAVKNATGDWTANSADGRGITMRPFMTIDKESYSTYVQLKS
Ga0210394_118056791	3300021420	Soil	NNAAGDLIANSAEATPVSMRPFMSIDKESYSTYVQLKS
Ga0210391_100043957	3300021433	Soil	VLFAVADSQPTFDRNTLLQAKPANNAAGDQLASSIDGSHVAMRPFMNIDKENYSTYVSLK
Ga0210402_108284992	3300021478	Soil	HPKLVGLVQGALVLFAIADSQPSFDQNTLLQAKATNNNTGDFLATSVNGTSVTMRPFMNIDKESYSTYVLLKS
Ga0210410_101450941	3300021479	Soil	RLSNNAAGDLIANSAEATPVSMRPFMSIDKESYSTYVQLKS
Ga0210409_109909952	3300021559	Soil	NNATGDWIAQSVEGSSVSMRPFMKIDKESYSTYVLLKA
Ga0247668_10686701	3300024331	Soil	FAVADSQPSFTQNALLQAKPTNNATGDWLASSVNGSNVTMRPFMNIDKERYSTYVQLKS
Ga0207699_111130362	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VSESQPTFDRNALLQAKASNNVTGDWLATSVDGKGIAMRPYMVIDKESYSTYVQLKS
Ga0207654_110231071	3300025911	Corn Rhizosphere	VNTGRGDWTASSVSGGEVTMRPFMTIDKESYSTYVQITS
Ga0207664_118154651	3300025929	Agricultural Soil	LRAASNATGDWLASSADQRSITMRPFMMIDKEPYSTYVQLKS
Ga0209734_11046122	3300027535	Forest Soil	LSNNAAGDLIANSAEATPVSMRPFMSIDKESYSTYVQLKS
Ga0209008_10687262	3300027545	Forest Soil	FAVADSQPSFERNALLQAKPTNNAKGDWLASSADGSGVTMRPFMNIDKEIYSTYVLLKS
Ga0209221_11310251	3300027609	Forest Soil	PTRNATGDWLANSVDGSRVTMRPFMNIDKESYSTYVLLKS
Ga0209422_10194492	3300027629	Forest Soil	FDQGALLQAKPTPNTTGDWLASSADGSHVTMRPFMNIDKETYSTYVLLKS
Ga0209009_10561001	3300027667	Forest Soil	VGNSQPTFDQGALLQAKPTPNTTGDWLASSADGSHVTMRPFMNIDKETYSTYVLLKS
Ga0209580_100844412	3300027842	Surface Soil	NTTGDWSANSVDGKSITMRPFMTIDKESYSTYVQLKA
Ga0209580_102847492	3300027842	Surface Soil	LLQAKPVSGSKGDLQATSADGSSITMRPFMNIDKESYSTYVALKS
Ga0209169_102663802	3300027879	Soil	ALLQAKPTNNAKGDWLASSADGSSVTMRPFMNIDKESYSTYVLLKS
Ga0209624_104647322	3300027895	Forest Soil	AAGDWSATSADGAQVTMRPFMSIDKESYSTYLRIKS
Ga0209698_113960632	3300027911	Watersheds	PLVLFAVADSQPTFDRNALLQAKATNNAVGDWNASSTDGSSVTMRPFMNIDKENYSTYVMLKS
Ga0209069_107292382	3300027915	Watersheds	ETFAMASAADGSSISMRPFMNIDKESYSTYVMLKS
Ga0209526_101857142	3300028047	Forest Soil	FAVGSSQPTFDQGALLQAKPTPNTTGDWLASSADGSHVTMRPFMNIDKETYSTYVLLKS
Ga0302267_103932341	3300028745	Bog	LNNASGDWVANSIGGGQITMRPFMTIDKESYSTYVQILS
Ga0302156_101176761	3300028748	Bog	LLRAKPLNNASGDWVANSIGGGQITMRPFMTIDKESYSTYVQILS
Ga0308309_118987282	3300028906	Soil	PTFDRNTLLQAKPANNAAGDQLAGSIDGSHVAMRPFMNIDKENYSTYVSLKS
Ga0222749_104505131	3300029636	Soil	NTTGDFVATSANGSSITMRPFMNIDKESYSTYVLLKS
Ga0311368_109332832	3300029882	Palsa	ATNNATGDWVATSIDGGRVTMRPFMNIEKENYSTYVMLKS
Ga0311338_113521601	3300030007	Palsa	SLLQAKPANNTGDWLASSADGGKVTMRPFMNIDKESYSTYVLLKS
Ga0302176_104225641	3300030057	Palsa	VGNAQPSFDRNALLRAKPTNSAGGDWLASSSDGTSVTMRPFMNIDKESYSAYVLLKA
Ga0302183_102196501	3300030509	Palsa	QPSFDRNALLRAKPTNSAGGDWLASSSDGTSVTMRPFMNIDKESYSAYVLLKA
Ga0311356_112773911	3300030617	Palsa	LFAVADSQPSFDRNALLQAKPTNNPRGDWLVTSSDGSSVTMRPFMNIDKESYSAYVLLKS
Ga0311354_102563741	3300030618	Palsa	AVSDSQPSFERNGLLQAKATNNATGDWVTTSIDGGRVTMRPFMNIEKENYSTYVMLKS
Ga0265762_10181781	3300030760	Soil	AKPTNNAKGDWLASSADGSSVTMRPFMNIDKESYSTYVLLKS
Ga0302314_118999672	3300030906	Palsa	SNSTGDWLATSAGGSNVTMRPFMNIDKESYSSYVWLKS
Ga0308199_10921982	3300031094	Soil	LRAQMTNNAAGDSIAKSVDGQSVSMRPFMSIDKESYSTYVLLKS
Ga0307500_101184181	3300031198	Soil	MAVGESQPTFNRSGLLQAKAANNPAGDWLASSADGSNITMRPFMTIDKETYSTYVQLKS
Ga0170824_1269832412	3300031231	Forest Soil	QAKPTNNKAGDWTASAADGSNVTMRPFMSIGKESYSTYVLLKS
Ga0310686_1072311452	3300031708	Soil	RNALLQAKPANNAKGDWLVSSADGSGVTMRPFMNIDNENYSTYVLLKS
Ga0307474_106692722	3300031718	Hardwood Forest Soil	NGLLQAKPAQNAKGDWLATAADGSNVTMRPFMNIDKESYSTYVLLKG
Ga0318568_105358152	3300031819	Soil	GNATGDLLASSADGKHISMRPFMTIDKESYSAYVRIKS
Ga0307473_112568682	3300031820	Hardwood Forest Soil	SFDENALLQAKASNNAAGDWMANSADGSSVTMRPFMNIDKESYSTYVLLKS
Ga0306921_112608381	3300031912	Soil	AGNASKGDWIAKSADGSEIIMRPFMNIDQESYSTYVLLKA
Ga0306926_111448662	3300031954	Soil	AKASNNASGDWSATSADGSHITMRPFMTIDKESYSTYMLLKS
Ga0307479_115974991	3300031962	Hardwood Forest Soil	SQLSNNAAGDLIANSAEATPVSMRPFMSIDKESYSTYVQLKS
Ga0306922_118733451	3300032001	Soil	DRGSLLQAKPAAIRDKGDWLATSTDGKQITMRPFMTIDKESYSAYLLLKS
Ga0318533_111766232	3300032059	Soil	TQSLLRAKPTNNATGDWLATAGDGRQISMRPFMTIDKETYSAYVRINS
Ga0318577_105826201	3300032091	Soil	AVADSQPSFDRNALLQARPTNNANGDWLAKSADGSDVTMRPFMNIDKENYSTYVVLKS
Ga0307471_1003020801	3300032180	Hardwood Forest Soil	NATNNDQGDSTAVAADGSSVIMRPFSTINQESYSTYVLLKS
Ga0307472_1004793791	3300032205	Hardwood Forest Soil	GLLQAKAANNKAGDWTATAADGSSVTMRPFMNIDKESYSTYVLLKS
Ga0306920_1038818372	3300032261	Soil	QAKASNNASGDWSATSADGSHITMRPFMTIDKESYSTYMLLKS
Ga0335082_104208951	3300032782	Soil	VLFAVADAQPTFDTTGLLQAKPTNNGKGDWMARSADGSEITMRPFMNIDKENYSTYVLLK
Ga0335078_117241042	3300032805	Soil	IADSQLSFDRNGLLQAKATNNATGDWTATSADGSSVTMRPFMNIDKEKYSTYVVLKS
Ga0335081_101295523	3300032892	Soil	LLAIANSQPSFDRNSLLQAKPAKNATGDWTATSADGSSVTLRPFMNIDKENYSTYVLLKS
Ga0335075_106482061	3300032896	Soil	AQPTNNAAGDWLATSSDGSSVTMRPFMNIDKESYSTYVLLKA
Ga0335083_101840241	3300032954	Soil	PLVLMAVAESQPSFEKRSLLNAKSAANSDKGDWLATSSDGKQIIMRPFMRIDKESYSAYVLLKS
Ga0326726_118159851	3300033433	Peat Soil	NALFQAKSVNNAVGDWTANSVDGSQITMRPFMTIDKENYSTYVLLKS
Ga0316214_10283381	3300033545	Roots	AKGDWTATSADGSTVAMRPFMNIDKESYSTYVLLKS
Ga0314867_049179_12_146	3300033808	Peatland	LQAKAANSSKGDWLATAADGSSVSMRPFMNIDKESYSTYLLLKA
Ga0334840_191480_413_520	3300033824	Soil	SGDWVANSIGGGQITMRPFMTIDKESYSTYVQILS
Ga0334827_081463_994_1104	3300034065	Soil	ASGDWVANSIGGGQITMRPFMTIDKESYSTYVQILS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F048617

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences