Metagenome / Metatranscriptome Family F048857

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F048857
Family Type	Metagenome / Metatranscriptome
Number of Sequences	147
Average Sequence Length	86 residues
Representative Sequence	MTITPLSPSPITASVRRRYLTGTGHAPPTATVSAAFGRQNLEHRIPDHRADRIQGGQNQRPAGHSTVVLSGTDKSDQAAAANSP
Number of Associated Samples	120
Number of Associated Scaffolds	147

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	3.42 %
% of genes near scaffold ends (potentially truncated)	52.38 %
% of genes from short scaffolds (< 2000 bps)	78.23 %
Associated GOLD sequencing projects	115
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.12

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (52.381 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.735 % of family members)
Environment Ontology (ENVO)	Unclassified (42.177 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.340 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 1.79% Coil/Unstructured: 98.21%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.12
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.12
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 147 Family Scaffolds
PF04986	Y2_Tnp	44.90
PF14319	Zn_Tnp_IS91	10.20
PF13495	Phage_int_SAM_4	4.08
PF00589	Phage_integrase	3.40
PF13424	TPR_12	2.04
PF13408	Zn_ribbon_recom	0.68
PF02705	K_trans	0.68
PF08483	Obsolete Pfam Family	0.68
PF03976	PPK2	0.68
PF00582	Usp	0.68
PF00239	Resolvase	0.68
PF03631	Virul_fac_BrkB	0.68
PF00884	Sulfatase	0.68
PF00536	SAM_1	0.68
PF00890	FAD_binding_2	0.68
PF02195	ParBc	0.68
PF06983	3-dmu-9_3-mt	0.68

COG ID	Name	Functional Category	% Frequency in 147 Family Scaffolds
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.68
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.68
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.68
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.68
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	0.68
COG3158	K+ uptake protein Kup	Inorganic ion transport and metabolism [P]	0.68
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
All Organisms	root	All Organisms	47.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
cellular organisms	root	All Organisms → cellular organisms	47.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	35.37 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.68 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	29.93 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.68 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.24 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.36 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.68 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.40 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.68 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.68 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.68 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.68 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.72 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.68 %
Acidisphaera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera	0.68 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	0.68 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.68 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.36 %
Azospirillum rugosum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum rugosum	0.68 %
unclassified Acidisphaera	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera	0.68 %
Mesorhizobium delmotii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium delmotii	0.68 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.68 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.68 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.36 %
Acidisphaera sp. S103	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	0.68 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.68 %
Azospirillum rugosum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum rugosum	0.68 %
Mesorhizobium delmotii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium delmotii	0.68 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.68 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10022057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2601	Open in IMG/M
3300005167\|Ga0066672_10061274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2195	Open in IMG/M
3300005172\|Ga0066683_10057970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	2298	Open in IMG/M
3300005172\|Ga0066683_10186404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1279	Open in IMG/M
3300005175\|Ga0066673_10124869	Not Available	1408	Open in IMG/M
3300005176\|Ga0066679_10877544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	567	Open in IMG/M
3300005177\|Ga0066690_10347499	Not Available	1005	Open in IMG/M
3300005186\|Ga0066676_10026537	Not Available	3098	Open in IMG/M
3300005363\|Ga0008090_15457285	Not Available	506	Open in IMG/M
3300005363\|Ga0008090_15774615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	654	Open in IMG/M
3300005434\|Ga0070709_10063310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2362	Open in IMG/M
3300005450\|Ga0066682_10048652	All Organisms → cellular organisms → Bacteria → Proteobacteria	2565	Open in IMG/M
3300005450\|Ga0066682_10433427	Not Available	838	Open in IMG/M
3300005454\|Ga0066687_10163661	Not Available	1187	Open in IMG/M
3300005471\|Ga0070698_101185599	Not Available	713	Open in IMG/M
3300005555\|Ga0066692_10162779	All Organisms → cellular organisms → Bacteria	1377	Open in IMG/M
3300005561\|Ga0066699_10589387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	798	Open in IMG/M
3300005602\|Ga0070762_10030351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2886	Open in IMG/M
3300005764\|Ga0066903_104560612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	738	Open in IMG/M
3300005764\|Ga0066903_105062939	Not Available	699	Open in IMG/M
3300005921\|Ga0070766_10040510	Not Available	2582	Open in IMG/M
3300006800\|Ga0066660_10406771	Not Available	1125	Open in IMG/M
3300006871\|Ga0075434_100805502	Not Available	955	Open in IMG/M
3300006893\|Ga0073928_10240057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1392	Open in IMG/M
3300009012\|Ga0066710_100965437	Not Available	1314	Open in IMG/M
3300009094\|Ga0111539_11659758	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300009792\|Ga0126374_10183019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1307	Open in IMG/M
3300010046\|Ga0126384_10366298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1206	Open in IMG/M
3300010048\|Ga0126373_11873965	Not Available	663	Open in IMG/M
3300010159\|Ga0099796_10004931	Not Available	3282	Open in IMG/M
3300010360\|Ga0126372_10518636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	1124	Open in IMG/M
3300010361\|Ga0126378_10250011	Not Available	1866	Open in IMG/M
3300010366\|Ga0126379_13047043	All Organisms → cellular organisms → Bacteria → Proteobacteria	561	Open in IMG/M
3300010376\|Ga0126381_102191008	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300010400\|Ga0134122_12288689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	586	Open in IMG/M
3300012285\|Ga0137370_10690860	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300012350\|Ga0137372_10225764	Not Available	1484	Open in IMG/M
3300012361\|Ga0137360_10433485	Not Available	1112	Open in IMG/M
3300012361\|Ga0137360_11056586	Not Available	701	Open in IMG/M
3300012683\|Ga0137398_10064078	Not Available	2222	Open in IMG/M
3300012927\|Ga0137416_10254455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1436	Open in IMG/M
3300016294\|Ga0182041_11557817	Not Available	609	Open in IMG/M
3300016357\|Ga0182032_10997417	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300016422\|Ga0182039_11318763	Not Available	654	Open in IMG/M
3300016445\|Ga0182038_10887614	Not Available	785	Open in IMG/M
3300017943\|Ga0187819_10235331	Not Available	1074	Open in IMG/M
3300017972\|Ga0187781_11228577	Not Available	552	Open in IMG/M
3300018085\|Ga0187772_10133986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1626	Open in IMG/M
3300018085\|Ga0187772_10397277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	959	Open in IMG/M
3300018431\|Ga0066655_10734232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	669	Open in IMG/M
3300018482\|Ga0066669_10583895	Not Available	977	Open in IMG/M
3300020140\|Ga0179590_1060621	Not Available	987	Open in IMG/M
3300020580\|Ga0210403_10051814	Not Available	3281	Open in IMG/M
3300020580\|Ga0210403_10951653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	674	Open in IMG/M
3300020583\|Ga0210401_10669947	Not Available	898	Open in IMG/M
3300021088\|Ga0210404_10414269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	754	Open in IMG/M
3300021170\|Ga0210400_11256910	Not Available	595	Open in IMG/M
3300021361\|Ga0213872_10094552	Not Available	1335	Open in IMG/M
3300021406\|Ga0210386_10096495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2417	Open in IMG/M
3300021432\|Ga0210384_10561501	Not Available	1026	Open in IMG/M
3300021432\|Ga0210384_10805180	Not Available	837	Open in IMG/M
3300021439\|Ga0213879_10114720	Not Available	763	Open in IMG/M
3300021476\|Ga0187846_10005289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6570	Open in IMG/M
3300021476\|Ga0187846_10042031	Not Available	2040	Open in IMG/M
3300021478\|Ga0210402_10155933	All Organisms → cellular organisms → Bacteria → Proteobacteria	2081	Open in IMG/M
3300021560\|Ga0126371_10098465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2908	Open in IMG/M
3300021560\|Ga0126371_10537346	Not Available	1318	Open in IMG/M
3300021560\|Ga0126371_11396960	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300022557\|Ga0212123_10310611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1097	Open in IMG/M
3300024225\|Ga0224572_1012963	Not Available	1589	Open in IMG/M
3300026305\|Ga0209688_1015503	Not Available	1460	Open in IMG/M
3300026306\|Ga0209468_1023222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2202	Open in IMG/M
3300026335\|Ga0209804_1296527	All Organisms → cellular organisms → Bacteria → Proteobacteria	553	Open in IMG/M
3300026547\|Ga0209156_10095798	Not Available	1482	Open in IMG/M
3300027050\|Ga0209325_1016148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	862	Open in IMG/M
3300027663\|Ga0208990_1070054	Not Available	1013	Open in IMG/M
3300027765\|Ga0209073_10180516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	794	Open in IMG/M
3300027855\|Ga0209693_10101464	Not Available	1424	Open in IMG/M
3300027910\|Ga0209583_10037855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1641	Open in IMG/M
3300028047\|Ga0209526_10146364	Not Available	1655	Open in IMG/M
3300028536\|Ga0137415_10090475	All Organisms → cellular organisms → Bacteria	2916	Open in IMG/M
3300028718\|Ga0307307_10133492	Not Available	770	Open in IMG/M
3300031474\|Ga0170818_102816163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	654	Open in IMG/M
3300031543\|Ga0318516_10182370	Not Available	1209	Open in IMG/M
3300031543\|Ga0318516_10483127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	711	Open in IMG/M
3300031545\|Ga0318541_10214494	Not Available	1066	Open in IMG/M
3300031545\|Ga0318541_10348170	Not Available	827	Open in IMG/M
3300031549\|Ga0318571_10293488	Not Available	609	Open in IMG/M
3300031561\|Ga0318528_10191491	All Organisms → cellular organisms → Bacteria → Proteobacteria	1093	Open in IMG/M
3300031564\|Ga0318573_10755648	All Organisms → cellular organisms → Bacteria → Proteobacteria	522	Open in IMG/M
3300031573\|Ga0310915_10398372	Not Available	977	Open in IMG/M
3300031668\|Ga0318542_10313909	Not Available	803	Open in IMG/M
3300031680\|Ga0318574_10124053	Not Available	1451	Open in IMG/M
3300031713\|Ga0318496_10828226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	510	Open in IMG/M
3300031723\|Ga0318493_10175462	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300031724\|Ga0318500_10472901	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300031740\|Ga0307468_100901174	Not Available	767	Open in IMG/M
3300031747\|Ga0318502_10254545	Not Available	1026	Open in IMG/M
3300031747\|Ga0318502_10408241	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	808	Open in IMG/M
3300031748\|Ga0318492_10367804	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300031753\|Ga0307477_10453693	Not Available	874	Open in IMG/M
3300031763\|Ga0318537_10073778	Not Available	1252	Open in IMG/M
3300031768\|Ga0318509_10097062	Not Available	1584	Open in IMG/M
3300031768\|Ga0318509_10543075	Not Available	649	Open in IMG/M
3300031770\|Ga0318521_10177076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1223	Open in IMG/M
3300031780\|Ga0318508_1017481	Not Available	1707	Open in IMG/M
3300031780\|Ga0318508_1193799	Not Available	581	Open in IMG/M
3300031781\|Ga0318547_10250136	Not Available	1069	Open in IMG/M
3300031793\|Ga0318548_10069037	All Organisms → cellular organisms → Bacteria → Proteobacteria	1650	Open in IMG/M
3300031832\|Ga0318499_10218289	Not Available	742	Open in IMG/M
3300031860\|Ga0318495_10205064	Not Available	887	Open in IMG/M
3300031860\|Ga0318495_10332790	Not Available	674	Open in IMG/M
3300031890\|Ga0306925_10107692	All Organisms → cellular organisms → Bacteria	2971	Open in IMG/M
3300031893\|Ga0318536_10128676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1281	Open in IMG/M
3300031896\|Ga0318551_10784630	Not Available	553	Open in IMG/M
3300031910\|Ga0306923_10249884	Not Available	2028	Open in IMG/M
3300031910\|Ga0306923_11487383	Not Available	709	Open in IMG/M
3300031910\|Ga0306923_11999785	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300031912\|Ga0306921_10012784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9004	Open in IMG/M
3300031912\|Ga0306921_10258842	All Organisms → cellular organisms → Bacteria → Acidobacteria	2038	Open in IMG/M
3300031912\|Ga0306921_11021641	Not Available	931	Open in IMG/M
3300031938\|Ga0308175_102724691	Not Available	553	Open in IMG/M
3300031941\|Ga0310912_10039233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3274	Open in IMG/M
3300031942\|Ga0310916_10665202	Not Available	882	Open in IMG/M
3300031942\|Ga0310916_11358305	Not Available	583	Open in IMG/M
3300031946\|Ga0310910_10468027	Not Available	1000	Open in IMG/M
3300031954\|Ga0306926_10069555	Not Available	4257	Open in IMG/M
3300031954\|Ga0306926_11281940	Not Available	856	Open in IMG/M
3300032001\|Ga0306922_11552115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum rugosum	660	Open in IMG/M
3300032041\|Ga0318549_10156079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium delmotii	1017	Open in IMG/M
3300032044\|Ga0318558_10026332	All Organisms → cellular organisms → Bacteria	2414	Open in IMG/M
3300032051\|Ga0318532_10083134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1121	Open in IMG/M
3300032051\|Ga0318532_10236512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	648	Open in IMG/M
3300032051\|Ga0318532_10312624	Not Available	557	Open in IMG/M
3300032052\|Ga0318506_10352685	Not Available	652	Open in IMG/M
3300032055\|Ga0318575_10699805	Not Available	512	Open in IMG/M
3300032076\|Ga0306924_10289610	All Organisms → cellular organisms → Bacteria → Proteobacteria	1880	Open in IMG/M
3300032089\|Ga0318525_10017328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3374	Open in IMG/M
3300032180\|Ga0307471_102353848	Not Available	672	Open in IMG/M
3300032205\|Ga0307472_100026453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3285	Open in IMG/M
3300032261\|Ga0306920_100271844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2526	Open in IMG/M
3300032261\|Ga0306920_100319579	All Organisms → cellular organisms → Bacteria	2311	Open in IMG/M
3300033289\|Ga0310914_10010748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6782	Open in IMG/M
3300033289\|Ga0310914_10088762	Not Available	2636	Open in IMG/M
3300033290\|Ga0318519_10109277	All Organisms → cellular organisms → Bacteria	1499	Open in IMG/M
3300034817\|Ga0373948_0174665	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.60%
Host-Associated	Host-Associated	3.40%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.88%
Plants	Host-Associated → Plants	3.40%
Aquatic	Environmental → Aquatic	2.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.40%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.36%
Cave	Environmental → Terrestrial → Cave	1.36%
Freshwater	Environmental → Aquatic → Freshwater	0.68%
Sediment	Environmental → Aquatic → Sediment	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.31%
Loam	Environmental → Terrestrial → Soil → Loam	8.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.72%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.04%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.36%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.36%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.68%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	51.70%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.97%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.72%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.04%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.36%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.36%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.36%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.68%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.68%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.68%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.12%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.04%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.04%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.04%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.36%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.36%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	1.36%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.36%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.36%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.68%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.68%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.68%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027050	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_100220573	3300001867	Forest Soil	MTITTLSPSPITASVPRRYLTGTGHASPAATVSAAFGRQNLQHPIPDHHADRTQSGQNQRLAGHPTVVLFATAKSDQAAAANSP*
Ga0066672_100612741	3300005167	Soil	MTITPLSPSPIIASVRRRYLTGTGHALPTTIVSAAFGRQNLERRTPDHRADRIQGGQNRRAAGHSTVAPVHNRQIRSSTDGKSP*
Ga0066683_100579701	3300005172	Soil	MTITPLSPSPITASVRRRYLTGTVHPSTTATVSAAFGRQNPRHQVPDHCADRIHGGQNQRPAGHSTVVLSGTDKSDQAAAANSP*
Ga0066683_101864042	3300005172	Soil	MTITPLSPSPIAASVRPRYLTGTGHAPPTATVSAAFGRQNLEHRTPDHRADRIQGGQSQRPAGHSTVVLSGTDKSDQAAAANSP*
Ga0066673_101248692	3300005175	Soil	MTITPLSPSPIIASVRRRYLTGTGHALPTTIVSAAFGRQNLERRTPDHRADRIQGGQNRRAAGHSTVAPVHNRQIRSSTDAKSP*
Ga0066679_108775442	3300005176	Soil	MTITPLSPSPIIASVRRRYLTGTGHALPTTIVSAAFGRQNLERRTPDHRADRIQGGQNRRAAGHSTVAPVHNRQIRSSTD
Ga0066690_103474991	3300005177	Soil	MTITPLSPSPITASVRRRYLTGTGLAPPTAAVSAFFGRQNLEHRIPDHRADRIRGGQNQRPAGHSTVVLSGTDKSDQPAAANSP*
Ga0066676_100265371	3300005186	Soil	MTITPLSPSPITASVRRRYLTGTVHPSTTATVSAAFGRQNPRHQVPDHCADRIHGGQNQRPAGHSTVVLSGTDKS
Ga0008090_154572852	3300005363	Tropical Rainforest Soil	MTITTLPPSLNTAPTRHRYLIGNAHASPTATLGATFGRQTLEHRIPDHRADPIQRSQNQRPAAHSTVVLSGTHKSDQAAPANS
Ga0008090_157746151	3300005363	Tropical Rainforest Soil	MTITPLSPSPITASVRGRYLTGTGHASPTATVRPAFGRQNLQHRMPDHQADRTQTGQNQRLAGYSTAVLSETN
Ga0070709_100633102	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTITPLSPSPITASVRRRYLTGTGHAPPTATVSAAFGRQNLEHRIPDHRADRIQGGQNQRPAGHSTVVLSGTDKSDQAAAANSP*
Ga0066682_100486521	3300005450	Soil	MTITPLSPSPITASVRRRYLTGTVHPSTTATVSAAFGRQNPRHQVPDHCADRIHGGQNQRPAGHSTVVLSGTDKSD*
Ga0066682_104334271	3300005450	Soil	MTITPLSPSPIIASVRRRYLTGTGHALPTTIVSAAFGRQNLERRTPVHRADRIQGGQNRRAAGHSTVAPVHNRQIRSSTDAKSP*
Ga0066687_101636611	3300005454	Soil	MTITPLSPSPITASVRRRYHAGAAHALRTATVSAAFGRQNLQHRIPDHRADRTQSGQNQRPAGHSTVVLSGTDKSD*
Ga0070698_1011855991	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MTITPLSPSPITASVRRRYLTGTGHASPTATARAAFGRQNLEHQRPDHRADHIHAGQNQRSAGQPTVTLSATHQSDQAATANSP*
Ga0066692_101627792	3300005555	Soil	MTITPLSPSPITTSVRRRYLAGAAHALRTATVSAEFGRQNLQHRIPDHRADRPQSGQNQRPAGHSTVVLSGTDKSD*
Ga0066699_105893872	3300005561	Soil	MTITPLSPSPIIASVRRRYLTGTGHALPTTIVGAAFGRQNLERRTPDHRADRIQGGQNRRAAGHSTVIPVRNRHIRSSTGGKSP*
Ga0070762_100303512	3300005602	Soil	MTITPLSPSPIIASVRRRYLTATAHALSTATVSAAFGRQNLQHRIPDHQLDRTQSGQNQRLAGHSTVVLSGTDKSD*
Ga0066903_1045606121	3300005764	Tropical Forest Soil	MTITPLSPSPITASVRGRRYLNGSGHPTPPATFSAAFGWQNPQHRTPDHCADQIQGGQNQRPDGRLSVVLPGTHRSDQAAAANSP*
Ga0066903_1050629392	3300005764	Tropical Forest Soil	PAAAVAYPIDRARQFMTITPLSPSPNAPVRPCYLTGTGHASPTATVSATFNRQNLVHRIPDHRVDPTQGGQNQRPAGRSTVLLSGTHKSDQAAAANSS*
Ga0070766_100405102	3300005921	Soil	MTITPLSPSPIIAYVRRRYLTATAHALSTATVSAAFGRQNLQHRIPDHQLDRTQSGQNQRLAGHSTVVLSGTDKSD*
Ga0066660_104067712	3300006800	Soil	MTITPLSPSPIIASVRRRYLTGTGHALPTTIVGAAFGRQNLERRTPDHRADRIQGGQTRRAAGHSTVAPVHNRQIRSSTDAKSP*
Ga0075434_1008055022	3300006871	Populus Rhizosphere	MTITPLSPSPITASLRRRYLTGTGHAPPTATVSAAFGRQNLEHRIPDHRADRIQGGQNQHPAGHSTVILSGTDK*
Ga0073928_102400572	3300006893	Iron-Sulfur Acid Spring	MTITPLSPSPLTTSDRPRYLTGTGHASPTATVSAAFGRQNLLHRMPDHPADRVQGGQNQRPAGHSTVVLSGTDKPDQAAAANSP*
Ga0066710_1009654372	3300009012	Grasslands Soil	MTITPLSPSPITASVRRRYLTGTGHPSTTATVSAAFGRQNPRHQVPDHCADRIHGGQNQRPAGHSTVVLSGTDKSDQAAAANSP
Ga0111539_116597582	3300009094	Populus Rhizosphere	MTITPLSPSPITASVRRRYLTGTGHAPPTATVSAAFGRQNLEHRIPDHRADRIQGGQNQHPAGHSTVILSGTDK*
Ga0126374_101830192	3300009792	Tropical Forest Soil	MTITPLAPSPITASVRHRYLTGTGHASPTATVSTAFGRQNLQHRIPDHQADRTQGGQNHRPAAHSTVVLSGTDKSGQAAAANSP*
Ga0126384_103662982	3300010046	Tropical Forest Soil	MTITPLAPSPITASVRRRYLTGTGHASPTATVSTAFGRQNLQHRIPDHQADRTQGGQNHRPAAHSTVVLSGTDKSGQAAAANSP*
Ga0126373_118739651	3300010048	Tropical Forest Soil	LSPSPITAPTRRRYLTGSAHASPTATLSAFFDRQNLEHRVPDRRANPIQRSQNPNPAARSTLVLSGTHKSDQAAAANSP*
Ga0099796_100049313	3300010159	Vadose Zone Soil	MTITPLSPSPIIASVRTRYLTGIGYAPPTATVSAAFGRQNLEHRIPDHRADRIQGRQNRRLAGHSTVVPVRGRQIRSSTDGKSP*
Ga0126372_105186361	3300010360	Tropical Forest Soil	LMTITPLSPSPITASVPRRHLTGTRHASPTATLSAAFGRQNLQHRIPHHQAGRTQGGQGKRPAGQSTVVLSGPDKSDQAAAANSP*
Ga0126378_102500113	3300010361	Tropical Forest Soil	MTSTPLLQSLITASVRRRYLTGTGHASTIATVSAAFGRQDLELPIPDHRADLIQGGQNQRPAGHSTGVLSGTHKSDQAAAAHSP*
Ga0126379_130470432	3300010366	Tropical Forest Soil	MTITPLSPPPNTAPDRRCYLTGTGHASPTATVSATFNRQNLVHRIPDHRVDPTQGGQNQRPAGRSTVLLSGTHKSDQAAAANSS*
Ga0126381_1021910081	3300010376	Tropical Forest Soil	MTTTPLPSSPITASIQRRYLTGIGHLSPTATVCTAVDRQNLEHQLPDHRADRIHGGQNQRPAGRSTVALSATHKSDQAAAANSP*
Ga0134122_122886891	3300010400	Terrestrial Soil	MTMTPLSPSPNTAPTRRRYLTGSAHAAPTATLDPTFGRQNLEHRIPDHRPDPIQGGQNRRPARRSTLVLSRTHK
Ga0137370_106908603	3300012285	Vadose Zone Soil	MTITPLSPSPIIASVRRRYLTGTGHALPTTIVSAAFGRQNLERRTPDHRADRIQGGQNRRAAGHSTVAPVHNRQIRSSTDGNPHRSTPA
Ga0137372_102257641	3300012350	Vadose Zone Soil	LMTITPLSPSPITASVQRRYLPGIGHASPTATASAAFGRQNLEHRRPDHRADRLQGGPNQRPAAQSTLALSATHKSDQAAAANSP*
Ga0137360_104334851	3300012361	Vadose Zone Soil	MTITPLSPSPITTSVRRRYLAGAAHALRTATVSAEFGRQNLQHRIPDHRADRPQSGQNQCPAGHSTVVLS
Ga0137360_110565861	3300012361	Vadose Zone Soil	MTITSLSTSPITASVRRRYLTGTGHASPTATVSAASGRQNLEHRMPDQPADRIQSGQNQRPAGHLTVVLSGTDKSAQAAAANSP*
Ga0137398_100640782	3300012683	Vadose Zone Soil	MTITPLSPSPITASVRRRYLTGTGHAPPTATVSAAFGRQNLLHRIPDHRADRMQGGQNQCPAGHSTVVLSGTDKSDQAAAANSP*
Ga0137416_102544552	3300012927	Vadose Zone Soil	MTITPLSPSPITASVRRRYLTGIGHAPPTATVSAAFGRQNLEHRIPDHRADRMQGGQNQCPAGHSTVVLSGTDKSDQAAAANSP*
Ga0182041_115578171	3300016294	Soil	TRLPATAVAYPIDRARQFMTITTLSPSPNIVPTRRRYLTGSAHASPTATLNATFGRQHLEHRIPDHRADPIQGGQNQRPAGRLTVVLSGTHKSDQAAAANSP
Ga0182032_109974172	3300016357	Soil	VAYPVDRARQFMTMTPLSPSPNTAPTQRRYLTGSAHASPTATLDHTFGRQNLEHRIPDHRADPIQGGQNRRTARRSTVVKSRTHKSDQAAAANFP
Ga0182039_113187631	3300016422	Soil	DYHRDLRTRLPAAVVAYPVDRARQFMTMTPLSPSPNTAPTRRRYLTGNAHASPTATLDATFGRQNLEHRIPDHRADPIQGGQNRRTARRSTVVLSRTHKSDQAAAANST
Ga0182038_108876141	3300016445	Soil	MTITPLSPSPITASVRRRYLTGTGHAAPTATVRDAFGQQNLEHRIPDHRADRVQGGQNHRPAGHSTVVLSGTDKSDQAA
Ga0187819_102353311	3300017943	Freshwater Sediment	MTITPLSLSPITASVRRRYLTGTGHASPTVTVSAAFGRQNLEHRIPDHRADPIQGGQNQPPAGHSTVVLSATDKSDQAAAANSP
Ga0187781_112285771	3300017972	Tropical Peatland	LWRAHDYHRDLRTRLPAAAMADPSDRARQFMTITPLSPSPNTAPTRRRYLTGSAHASPTATLSATFGRQDLQHQTPDHRTDPIQSAQTQRPPGRSTVVLFATHKSDQAAATNSP
Ga0187772_101339862	3300018085	Tropical Peatland	MTITPLSPSRITAFLRRRYLTGTGNASPTATGSAAFAGQNLEHRMPNHLADRIQGRPNQRPAGHSTVVLSGTDKSDQAAAANSP
Ga0187772_103972771	3300018085	Tropical Peatland	MTITPLSPSLITASVRPCYLTGTGHASSTAIVSAASGRQNLQHRVADHQADRTERGQTQRPAGHSTVVMSETDKSDQTAPANSP
Ga0066655_107342322	3300018431	Grasslands Soil	MTITPLSPSPIIASVRRRYLTGTGHALPTTIVSAAFGRQNLERRTPDHRADRIQGGQNRRAAGHSTVAPVHNRQIRSSTDGKSP
Ga0066669_105838951	3300018482	Grasslands Soil	MTITPLSPSPITASVRRRYLTGTVHPSTTATVSAAFGRQNPRHQVPDHCADRIHGGQNQRPAGHSTVVLSGTDKSDQAAAANSP
Ga0179590_10606212	3300020140	Vadose Zone Soil	MTITPLSPSPITASVRRRYLTGTGHAPPTATVSAAFGRQNLEHRIPDHRADRMQGGQNQCPAGHSTVVLSGTDKS
Ga0210403_100518143	3300020580	Soil	MTITPLSPSPIIASVRRRYLTATAHALSTATVSAAFGRQNLQHRIPDHQLDRTQSGQNQRLAGHSTVVLSGTDKSD
Ga0210403_109516531	3300020580	Soil	MTITPLSPSPITASVRRRYLTGTGHASPTATVSTAFGRQNLEHRMPDHPADRIQGGQNQRPAAHSTVVLPGTDNQITQRQ
Ga0210401_106699471	3300020583	Soil	MTITPLSPSPITASVRRRYLTGTGHAPPTATVSAAFGRQNLEHRIPDHRADRIQGGQNQRPAGHSTVVLSGTDKSDQAAAANSP
Ga0210404_104142691	3300021088	Soil	MTMTPLSPSPNTAPTRRRYLTGNAHASPTATLDATFGRQNLEHPIPDRRADPIQGGQNRRTAPRSTVVLSRTHKADQAAATN
Ga0210400_112569102	3300021170	Soil	LSLLRRAYDHHRDFRTRLPAAAVAYPFDRARQLMTIAPLSPSAITASVRRRYFTGTGHAPPTVTLSAAFGRQNLEHRIPDHRAERIQGGQNQHPAGHSTVVLSGIDKSDQAATANSP
Ga0213872_100945522	3300021361	Rhizosphere	MTFIPLSLFPNTAPTRARYLTGSARLSPTATLGTTFGRQNLQHRIPDRRADPTQGGQNQRPTAVVRSGTHKSDQAAATNSP
Ga0210386_100964951	3300021406	Soil	MTITPLSPSPIIASVRRRYLTGTAHALSTATVSAAFGRQNLQHRTPDHQLDRTQSGQNQRLAGHSTVVLSGTDKSA
Ga0210384_105615012	3300021432	Soil	MTMTPLSPSPNTAPTRRRYLTGSAHALPTATLTATFGRQNLEHRIPDHRADPIQGGQNRRTARPSTVVL
Ga0210384_108051801	3300021432	Soil	MTITPPSPSPVTASVRRRYLTGTGHAPPTATVSAAFGRQNLKHRIPDHRADRIQAGQNQRPFGHSTVVLSGTDKSDQAAAANSP
Ga0213879_101147201	3300021439	Bulk Soil	MTITTLLQSPITASVPRRYLTGTGHASPTATVGAAFGRQNLQHPIPDRHADRTQSGQNQRLAGHPTVV
Ga0187846_100052891	3300021476	Biofilm	MTITPLSPSPNTAPTRRRYLTGSAHASPTAALGATFGRENLEHRIPDHRADPIQGGQNQRPAGRSTVVLSGTHKSDQAAAANSP
Ga0187846_100420312	3300021476	Biofilm	MTFIPLSPFPNTAPTRRRYLTGSANASPTATLGVTFGRQNLEQRTPDHRADPIRGSQHQRPAGRSTVVLSRTHNSDQAAAANSP
Ga0210402_101559333	3300021478	Soil	MTITPLSPSPITASVRRRYLTGTGHASPTATVSTAFGRQNLEHRMPDHPADRIQGGQNQRPAAHSTVVLSGTDKSHQAAAVNSP
Ga0126371_100984651	3300021560	Tropical Forest Soil	MTSTPLLQSLITASVRRRYLTGTGHASTIATVSAAFGRQDLELPIPDHRADLIQGGQNQRPAGHSIGVLSGTHKSDQAAAAHSP
Ga0126371_105373461	3300021560	Tropical Forest Soil	MTITPLSPSPITVAPVRRRYLAGTGHALPTATASAAFGRQNLQHRMPNHHADRTQSGQNQRLAGDSTVVLSGTDKSDQAAAANSP
Ga0126371_113969602	3300021560	Tropical Forest Soil	MTITPLSPSPFTASVRRRHFTGNGHPSPTATASAALGRQNPEHRVPDHCADRIQGGQNQRPDDRLSVVLPGTHKSDQAAAANSP
Ga0212123_103106112	3300022557	Iron-Sulfur Acid Spring	MTITPLSPSPLTTSDRPRYLTGTGHASPTATVSAAFGRQNLLHRMPDHPADRVQGGQNQRPAGHSTVVLSGTDKPDQAAAANSP
Ga0224572_10129632	3300024225	Rhizosphere	MTVAPLSPSPITASVRRRYLTGTGHASPTATVSAAIGRQNLEHRMPAHPADRIQSGQNQRPAGHSTVVLSATDKSDQAPAANSP
Ga0209688_10155031	3300026305	Soil	MTITPLSPSPIIASVRRRYLTGTGHALPTTIVSAAFGRQNLERRTPDHRADRIQGGQNRRAAGHSTVAPVHNRQIRSSTDAKSP
Ga0209468_10232223	3300026306	Soil	MTITPLSPSPITDSARRRHLTGTGHTSPIATVSAAFSRQNLEHRVPDPCADRIHGGQNQRSAGHSTVVMSGTDQSDQA
Ga0209804_12965272	3300026335	Soil	MTITPLSPSPIIASVRRRYLTGTGHALPTTIVSAAFGRQNLERRTPDHRADRIQGGQNRRAAGHSTVAPVHNRQI
Ga0209156_100957981	3300026547	Soil	MTITPLSPSPIIASVRRRYLTGTGHALPTTIVGAAFGRQNLERRTPDHRADRIQGGQNRRAAGHSTVIPARN
Ga0209325_10161481	3300027050	Forest Soil	MTITTLSPSPITASVPRRYLTGTGHASPAATVSAAFGRQNLQHPIPDHHADRTQSGQNQRLAGHPTVVLFATAKSDQAAAANSP
Ga0208990_10700541	3300027663	Forest Soil	MTITPLSPSPIIASVRTRYLTGIGYAPPTATVSAAFGRQNLEHRIPDHRADRMQGGQNQCPAGHSTVVLSGTDKSDQAAAANSP
Ga0209073_101805161	3300027765	Agricultural Soil	MTITPLSPSPITASLRRRYLTGTGHAPPTATVSAAFGRQNLEHRIPDHRADRIQGGQNQHPAGHSTVILSGTDK
Ga0209693_101014642	3300027855	Soil	MTITPLSPSPIIASVRRRYLTGTAHALSTATVSAAFGRQNLQHRIPDHQLDRTQSGQNQRLAGHSTVVLSGTDKSD
Ga0209583_100378552	3300027910	Watersheds	MTITPLSPSPITASVRRRYLTGTGHASPTATVSAAIGRQNLEHRIPAHPADRIQSGQNQRPAGHSTVVLSATDKSDQAPAANSP
Ga0209526_101463642	3300028047	Forest Soil	MTITPLSPSPITASVRRRYLTGTGHAPPTATVSAAFGRQNLEHRIPDHRADRMQGGQNQCPAGHSTVVLSGTDKSDQAAAANSP
Ga0137415_100904753	3300028536	Vadose Zone Soil	MTITPLSPSPIIASVRTRYLTGIGYAPPTATVSAAFGRQNLEHRIPDHRADRIQGRQNRRLAGHSTVVPVRGRQIRSSTDGKSP
Ga0307307_101334921	3300028718	Soil	MTITPLSPSPITASVRRRYLTGIGHAPPTATVSAAFGRQNLEHRIPDHRADRMQGGQNQCPAGHSTVVL
Ga0170818_1028161632	3300031474	Forest Soil	MTITPLSPSPITASVRRRYLTGIGHASPTATVSAAFGRQNLEHRMPDHPADRIQGGQNQRPAGHSAVVLSETDKSDQPAAANSP
Ga0318516_101823701	3300031543	Soil	MTITPLSLPPITASLTRRYLTGTGHASPTATVALQNPEFPLPDHRADRTQGGQNPRPAHQSTVVPSGTDKSDQAAATNSP
Ga0318516_104831271	3300031543	Soil	MTITPLSPSPVTAAVRRRYFTGTSHASPTATASAAFGRQNLEHRIPDHRADPIQGGQNQRPAGHSTVVLSATDKSDQAAA
Ga0318541_102144941	3300031545	Soil	MTITPLSPSPVTAAVRRRYFTGTSHASPTATASAAFGRQNLEHRIPDHRADPIQGGQNQRPAGHSTVVLSATDKSDQAAAANFP
Ga0318541_103481701	3300031545	Soil	VVAYPVDRARQFMTMTPLSPSPNTAPTRRRYLTGNAHASPTATLDATFGRQNLEHRIPDHRADPIQGGQNRRTAPRSTVVLSRTHKSDQAAAANST
Ga0318571_102934881	3300031549	Soil	MTMTPLSPSPNTAPTRRRYLTGNAHASPTATLDATFGRQNLEHRIPDRRADPIQGGQNRRTAPRSTVVLSRTHKSDQAAAANST
Ga0318528_101914912	3300031561	Soil	PVDRARQFMTMTPLSPSPNTAPTRRRYLTGNAHASPTATLDATFGRQNLEHRIPDHRADPIQGGQNRRTAPRSTVVLSRTHKSDQAAAANST
Ga0318573_107556481	3300031564	Soil	MTITPLSPSPSTAPTRRRYLTGSAHASPTATLGATFGRQNLEHRIPNHRADPTQGGQNQRPAGGSTVVLS
Ga0310915_103983721	3300031573	Soil	MTITPLSPSPNTAPTQYRYLTGSAHASPTAILDATFGRQNLQHQIPDHRTNPIQSAQTQRPAGRLTGVLSATHKSDQAAAANSP
Ga0318542_103139092	3300031668	Soil	AHDYHRDLRTRLPAAVVAYPVDRARQFMTMTPLSPSPNTAPTRRRYLTGNAHASPTATLDATFGRQNLEHRIPDHRADPIQGGQNRRTARRSTVVLSRTHKSDQAAAANST
Ga0318574_101240531	3300031680	Soil	MTITPLSPSPITASVRRRYLTGTGHAAPTATVRDAFGQQNLEHRIPDHRADRVQGGQNHRPAGHSTVVLSG
Ga0318496_108282262	3300031713	Soil	MTITPLSLPPITASLTRRYLTGTGHASPTATVGLQNPEFPLPDHRADRTQGGQNPRPAHQSTVVPSGTDKSDQAAATNS
Ga0318493_101754621	3300031723	Soil	MTVTPLSPSPNTAPTRRRYLTGSAHASPTATLGTSFGRHNLKHRIPDHRADPTQGGQNQRPAGRSTVVLSGTDKSD
Ga0318500_104729012	3300031724	Soil	PVAIPNTAPTRRRYLTGNAHASPTATLDATFGRQNLEHRIPDHRADPIQGGQNRRTARRSTVVLSRTHKSDQAAAANST
Ga0307468_1009011742	3300031740	Hardwood Forest Soil	MTITPLSPSPITASVRRRYLTGTVHPSTTATVSAAFGWQNPRHQMPDHCADRIHSGQNQRPAGHSTVVLSGTDKSDQAAAANSP
Ga0318502_102545452	3300031747	Soil	AYPTDRARQLMTITPLSPSPFTASVRRRHFNGNGHPSPTATASAAFGRQNPEHRMPDHCADRIRGGQNRRRAARSTVALSGTDKSDQAAPANSP
Ga0318502_104082411	3300031747	Soil	MTITPLPPSPITASVRTRCLTGTGYASPTATVSVAFGRQNLDHRIPDHRADRIQGGQNRRPARHSTVVSVRNQEIRSIIGGKSP
Ga0318492_103678041	3300031748	Soil	MTMTPLSPSPITAFLRRRYLTGTGHASPTATGRTAFGRQNLEHQRPDHWADRIQGGQNQRSAAQSTLARSATH
Ga0307477_104536932	3300031753	Hardwood Forest Soil	LRTRLPAAVVAYPVDRARQFMTMTPLSPSPNTAPTRRRYLTGNAHASPTATLDATFGRQNLEHPIPDRRADPIQGGQNRRTAPRSTVVLSRTHKSDQAAAANST
Ga0318537_100737781	3300031763	Soil	MTITPLSLPPITASLTRRYLTGTGHASPTATVALQNPEFPLPDHRADRTQGGQNPRPAHQSTVVPSGTDKSDQAAATNS
Ga0318509_100970621	3300031768	Soil	MTITPLSPSPNTAPIQRRYLTGSAHASPTATLGATFGRQNLEHRIPDHRTDPIQGGQNQRPAGRLTVSCPEPTNQIK
Ga0318509_105430751	3300031768	Soil	AHDYHRDLRTRLPAAVVAYPVDRARQFMTMTPLSPSPNTAPTQRRYLTGSAHASPTATLDATFGRQNLEHRIPDHRADPIQGGQNRRTARRSTVVLSRTHKSDQAAAANST
Ga0318521_101770762	3300031770	Soil	MTITPLSPSPVTAAVRRRYFTGTSHASPTATASAAFGRQNLEHRIPDHRADPVQGGQNQRPAGHSTVVLSATDKSDQAAAANFP
Ga0318508_10174812	3300031780	Soil	MTITPLAPSPITASVRRRYLTGTGHASPTATVSTAFGRQNLQHRIPDHQADRTQRGQNHRSAAHSTVVLSGTDKSGQAAAANSP
Ga0318508_11937992	3300031780	Soil	RLPAAVVAYPVDRARQFMTMTPLSPSPNTAPTQRRYLTGSAHASPTATLDATFGRQNLEHRIPDHRADPIQGGQNRRTARRSTVVLSRTHKSDQAAAANST
Ga0318547_102501361	3300031781	Soil	MTMTPLSPSPNTAPTRRRYLTGNAHASPTATLDATFGRQNLEHRIPDHRADPIQGGQNRRTARRSTVVLSRT
Ga0318548_100690371	3300031793	Soil	TRLPAAVVAYPVDRARQFMTMTPLSPSPNTAPTQRRYLTGSAHASPTATLDATFGRQNLEHRIPDHRADPIQGGQNRRTARRSTVVLSRTHKSDQAAAANST
Ga0318499_102182891	3300031832	Soil	YHRDLRTRLPAAVVAYPVDRARQFMTMTPLSPSPNTAPTQRRYLTGSAHASPTATLDATFGRQNLEHRIPDHRADPIQGGQNRRTARRSTVVLSRTHKSDQAAAANST
Ga0318495_102050641	3300031860	Soil	MTMTPLSPSPNTAPTQRRYLTGSAHASPTATLDATFGRQNLEHRIPDHRADPIQGGQNRRTARRSTVVLSRTHKS
Ga0318495_103327901	3300031860	Soil	FMTMTPLSPSPNTAPTQRRYLTGSAHASPTATLDHTFGRQNLEHRIPDHRADPIQGGQNRRTARRSTVVLSRTHKSDQAAAANST
Ga0306925_101076922	3300031890	Soil	MTITPRSPAPNTAPTRHRYLTGSTHASLTANLGATFGRQNLEHQIPDHRADPIHGGQNQRPAGRSTVVLSATHKSDQAAATNSP
Ga0318536_101286762	3300031893	Soil	MTMTPLSPSPNTAPTQRRYLTGSAHASPTATLDATFGRQNLEHRIPDHRADPIQGGQNRRTARRSTVVLSRTHKSDQAAAANST
Ga0318551_107846301	3300031896	Soil	SLLRRAHDYHRDLRTRLPAAVVAYPVDRARQFMTMTPLSPSPNTAPTQRRYLTGSAHASPTATLDATFGRQNLEHRIPDHRADPIQGGQNRRTARRSTVVLSRTHKSDQAAAANST
Ga0306923_102498841	3300031910	Soil	VVAYPVDRARQFMTMTPLSPSPNTAPTQRRYLTGSAHASPTATLDATFGRQNLEHRIPDHRADPIQGGQNRRTARRSTVVLSRTHKSDQAAAANST
Ga0306923_114873832	3300031910	Soil	LSLLWRAHDSRRDLRIRLPAAAVAYPIDRARQFMTITPLSPSPNTAPTQCRYLTGSAHASPTATLDATFGRQNLQHQIPGHRTNPIQSAQTQRPAGRLTVVLSATHKSDQAAAAYSP
Ga0306923_119997851	3300031910	Soil	MTITPLLPFPNTAPTRRRYLTGSAHASPTATLGATFGRQNLQHQTPDRRADPIQGSQNQNPTGRSTVVRSGTHKSHQAA
Ga0306921_100127847	3300031912	Soil	VVAYPVDRARQFMTMTPLSPSPNTAPTRRRYLTGSAHASPTATLDHTFGRQNLEHRIPDHRADPIQGGQNRRTARRSTVVKSRTHKSDQAAAANFP
Ga0306921_102588423	3300031912	Soil	MTITPLSPSPITASVPRRHLTGTRHASPTATLSAAFGRQNLQHRIPHHQAGRTQGGQGKRPAGQSTVVLSGPDKSDQAAAANSP
Ga0306921_110216411	3300031912	Soil	PRSPAPNTAPTRHRYLTGSTHASLTANLGATFGRQNLEHQIPDHRADPIHGGQNQRPAGRSTVVLSATHKSDQAAATNSP
Ga0308175_1027246911	3300031938	Soil	MTITPLSPSPITDSARRRHLTGTGHTSPTPTVSAAFSRQNLEHRVPDPCADRIHGGQNQRSAGHSTVVMSG
Ga0310912_100392336	3300031941	Soil	MTITPLSPPPITASVRGRRYLTGTGHPPPTATFSVAFGWQNPEHRIPDHCPDRIQGRQNQRSAGHSTLLPVWNRQITSSTGGKSP
Ga0310916_106652021	3300031942	Soil	ERLSLLRRAHDYHRDLRTRLPAAVVAYPVDRARQFMTMTPLSPSPNTAPTQRRYLTGSAHASPTATLDATFGRQNLEHRIPDHRADPIQGGQNRRTARRSTVVLSRTHKSDQAAAANST
Ga0310916_113583051	3300031942	Soil	RARQFMTITPLSPSPNTAPTQCRYLTGSAHASPTATLDATFGRQNLEHRIPDHRADPIQSGQTQRPAGRLTVVLSGTHKSDQAAAANSP
Ga0310910_104680272	3300031946	Soil	AHDYHRDLRTRLPAAVVAYPVDRARQFMTMTPLSPSPNTAPTRRRYLTGNAHASPTATLDATFGRQNLEHRIPDHRADPIQGGQNRRTAPRSTVVLSRTHKSDQAAAANST
Ga0306926_100695551	3300031954	Soil	QFMTMTPLSPSPNTAPTRRRYLTGSAHASPTATLDHTFGRQNLEHRIPDHRADPIQGGQNRRTARRSTVVQSRTHKSDQAAAANFP
Ga0306926_112819401	3300031954	Soil	MTITPLSPSPITASVPRRSLAGTGHAPPTATVSAAFGRQNLEHRIPDHSADRIQGGQNQCPAGHSTVVLSATDKSD
Ga0318530_103637651	3300031959	Soil	VERLSLLRRAHDYHRDLCTRLPAAAVAYPIDRARQFMTITPLSPSPSTASTRRRYLTGSAHASPTATLGATFGRQNLEHRIPNHRADPTQGGQNQRPAGRSTVVLSRTHKSDQAAAANSP
Ga0306922_115521152	3300032001	Soil	AAALADPIDRARQFMTITPLSPSPITPFVRPSHLTGTGRASPTTTLSAAFGQQNLEHRRPDHLADRIHGGQNQRPPGHSTVVLAGTDQSDQAAAANSP
Ga0318549_101560792	3300032041	Soil	MTITPLSPSPNTAPIQRRYLTGSAHASPTATLGATFGRQNLEHRIPDHRTDPIQGGQNQRPAGRLTVSCPEPTNQI
Ga0318558_100263325	3300032044	Soil	AYPVDRARQFMTMTPLSPSPNTAPTRRRYLTGNAHASPTATLDATFGRQNLEHRIPDHRADPIQGGQNRRTARRSTVVLSRTHKSDQAAAANST
Ga0318532_100831342	3300032051	Soil	MTMTPLSPSPNTAPTRRRYLTGNAHASPTATLDATFGRQNLEHRIPDHRADPIQGGQNRRTARRSTVVLSRTHKSDQAAAANST
Ga0318532_102365122	3300032051	Soil	MTITPLSPSPVTAAVRRRYFTGTSHASPTATASAAFGRQNLEHRIPDHRADPIQGGQNQRPAGHSTVVLSATDKSDQAA
Ga0318532_103126241	3300032051	Soil	MTITPLSPPSITTSVRRRYLTGTGHASPTATVSPVFGRQNLEHRIPDHRADRIQGGQNQRPAGLSTVLLSRTDK
Ga0318506_103526851	3300032052	Soil	AHDYHRDLRTRLPAAVVAYPVDRARQFMTMTPLSPSPNTAPTQRRYLTGSAHASPTATLDATFGRQNLEHRIPDHRADPIQGGQNRRTARRSNVVLSRTHKSDQAAAANST
Ga0318575_106998051	3300032055	Soil	TRTVERLSLLRRAHDHHRDLRTRLPAAVVAYPVDRARQFMTMTPLSPSPNTAPTQRRYLTGSAHASPTATLDATFGRQNLEHRIPDHRADPIQGGQNRRTARRSTVVLSRTHKSDQAAAANST
Ga0306924_102896101	3300032076	Soil	MTIAPLSPSPITASVSRRYLTGTGHPPPMATVSTAFGWQNPEHRIPDHCADRIQGGQSQRPAARSTLVPVWNRQIRSSTGAKS
Ga0318525_100173286	3300032089	Soil	VERLSLLRRAHDYHRDLRTRLPAAVVAYPVDRARQFMTMTPLSPSPNTAPTQRRYLTGSAHASPTATLDATFGRQNLEHRIPDHRADPIQGGQNRRTARRSTVVLSRTHKSDQAAAANST
Ga0307471_1023538482	3300032180	Hardwood Forest Soil	TRLPAAVVAYPVDRARQFMTMTPLSPSPNTAPTRRRYLTGNAHASPTATLDATFGRQNLEHPIPDRRADPIQGGQNRRTAPRSTVVLSRTHKSDQAAAANST
Ga0307472_1000264534	3300032205	Hardwood Forest Soil	MTMTPLSPSPNTAPTRRRYLTGNAHASPTATLDATFGRQNLEHPIPDRRADPIQGGQNRRTAPRSTVVLSRTHKSDQAAAANST
Ga0306920_1002718443	3300032261	Soil	MTITPLSPSPNTAPTRRRYLTGSAHTSPTATLGATFSRQNLQHQTPDHRTNPIQSAQTRRPPGRSTVVQSGT
Ga0306920_1003195791	3300032261	Soil	VVAYPVDRARQFMTMTPLSPSPNTAPTRRRYLTGSAHASPTATLDATFGRQNLEHRIPDHRADPIQGGQNRRTARRSTVVLSRTHKSDQAAAANST
Ga0310914_100107481	3300033289	Soil	LRTRLPAAVVAYPVDRARQFMTMTPLSPSPNTAPTRRRYLTGSAHASPTATLDHTFGRQNLEHRIPDHRADPIQGGQNRRTARRSTVVQSRTHKSDQAAAANFP
Ga0310914_100887621	3300033289	Soil	LPAAVVAYPVDRARQFMTMTPLSPSPNTAPTRRRYLTGNAHASPTATLDATFGRQNLEHRIPDRRADPIQGGQNRRTAPRSTVVLSRTHKSDQAAAANST
Ga0318519_101092774	3300033290	Soil	HDYHRDLRTRLPAAVVAYPVDRARQFMTMTPLSPSPNTAPTQRRYLTGSAHASPTATLDATFGRQNLEHRIPDHRADPIQGGQNRRTARRSTVVLSRTHKSDQAAAANST
Ga0373948_0174665_71_325	3300034817	Rhizosphere Soil	MTMTPLSPSPNTAPARRRYLTGNAHASPTATLDATFGRQNLEHRIPDHRADPIQGGQNRRTARRSTVVLSRTHKSDQAAAANST

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F048857

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences