NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F049160

Metagenome / Metatranscriptome Family F049160

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F049160
Family Type Metagenome / Metatranscriptome
Number of Sequences 147
Average Sequence Length 81 residues
Representative Sequence MNRLTVDERRRANELRRVAATTRAPRAVTLEHLEPRGAGWGRNARIATLVTLALGGALAVLQLAQTLSLYGPGSVLDWLLPRL
Number of Associated Samples 120
Number of Associated Scaffolds 147

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 86.11 %
% of genes near scaffold ends (potentially truncated) 27.89 %
% of genes from short scaffolds (< 2000 bps) 70.07 %
Associated GOLD sequencing projects 103
AlphaFold2 3D model prediction Yes
3D model pTM-score0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (97.959 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(27.891 % of family members)
Environment Ontology (ENVO) Unclassified
(48.299 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(63.265 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 67.57%    β-sheet: 0.00%    Coil/Unstructured: 32.43%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.39
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 147 Family Scaffolds
PF01019G_glu_transpept 31.97
PF09832DUF2059 13.61
PF13511DUF4124 6.80
PF13432TPR_16 3.40
PF00528BPD_transp_1 2.72
PF14559TPR_19 2.04
PF02596DUF169 1.36
PF13424TPR_12 1.36
PF00072Response_reg 0.68
PF13414TPR_11 0.68
PF01548DEDD_Tnp_IS110 0.68
PF01656CbiA 0.68
PF02371Transposase_20 0.68
PF11249DUF3047 0.68
PF01039Carboxyl_trans 0.68

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 147 Family Scaffolds
COG0405Gamma-glutamyltranspeptidaseAmino acid transport and metabolism [E] 31.97
COG2043Uncharacterized conserved protein, DUF169 familyFunction unknown [S] 1.36
COG3547TransposaseMobilome: prophages, transposons [X] 1.36
COG0777Acetyl-CoA carboxylase beta subunitLipid transport and metabolism [I] 0.68
COG0825Acetyl-CoA carboxylase alpha subunitLipid transport and metabolism [I] 0.68
COG4799Acetyl-CoA carboxylase, carboxyltransferase componentLipid transport and metabolism [I] 0.68


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.96 %
UnclassifiedrootN/A2.04 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_101455005All Organisms → cellular organisms → Bacteria1278Open in IMG/M
3300001661|JGI12053J15887_10386035All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium674Open in IMG/M
3300002558|JGI25385J37094_10017537All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria2564Open in IMG/M
3300002558|JGI25385J37094_10224433All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium500Open in IMG/M
3300002562|JGI25382J37095_10152702All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium751Open in IMG/M
3300002908|JGI25382J43887_10033767All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2769Open in IMG/M
3300002917|JGI25616J43925_10213571All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium739Open in IMG/M
3300003203|JGI25406J46586_10023121All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2461Open in IMG/M
3300004062|Ga0055500_10076801All Organisms → cellular organisms → Bacteria712Open in IMG/M
3300004267|Ga0066396_10108504All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium521Open in IMG/M
3300005166|Ga0066674_10029114All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2431Open in IMG/M
3300005167|Ga0066672_10380094All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium923Open in IMG/M
3300005171|Ga0066677_10027446All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2695Open in IMG/M
3300005171|Ga0066677_10250299All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1005Open in IMG/M
3300005171|Ga0066677_10315989All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium893Open in IMG/M
3300005174|Ga0066680_10185895All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1310Open in IMG/M
3300005176|Ga0066679_10560666All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium744Open in IMG/M
3300005178|Ga0066688_10173460All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1360Open in IMG/M
3300005181|Ga0066678_10165606All Organisms → cellular organisms → Bacteria1392Open in IMG/M
3300005181|Ga0066678_10610030All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium726Open in IMG/M
3300005184|Ga0066671_10024103All Organisms → cellular organisms → Bacteria2748Open in IMG/M
3300005184|Ga0066671_10819547All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium594Open in IMG/M
3300005186|Ga0066676_10150158All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1464Open in IMG/M
3300005186|Ga0066676_10220867All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1226Open in IMG/M
3300005187|Ga0066675_10028680All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium3240Open in IMG/M
3300005187|Ga0066675_10092110All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1980Open in IMG/M
3300005332|Ga0066388_100010980All Organisms → cellular organisms → Bacteria7106Open in IMG/M
3300005332|Ga0066388_100321811All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2192Open in IMG/M
3300005332|Ga0066388_100579023All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1748Open in IMG/M
3300005332|Ga0066388_103337207All Organisms → cellular organisms → Bacteria820Open in IMG/M
3300005445|Ga0070708_100015605All Organisms → cellular organisms → Bacteria6278Open in IMG/M
3300005445|Ga0070708_100200700All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1867Open in IMG/M
3300005445|Ga0070708_100766200All Organisms → cellular organisms → Bacteria907Open in IMG/M
3300005445|Ga0070708_101229704All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium700Open in IMG/M
3300005446|Ga0066686_10430581All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium901Open in IMG/M
3300005471|Ga0070698_100170369All Organisms → cellular organisms → Bacteria2118Open in IMG/M
3300005536|Ga0070697_100454145All Organisms → cellular organisms → Bacteria1116Open in IMG/M
3300005536|Ga0070697_100517405All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1044Open in IMG/M
3300005540|Ga0066697_10055353All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2255Open in IMG/M
3300005555|Ga0066692_10701996All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium627Open in IMG/M
3300005561|Ga0066699_10112832All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1810Open in IMG/M
3300005587|Ga0066654_10030591All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2243Open in IMG/M
3300005713|Ga0066905_102040405All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium533Open in IMG/M
3300006032|Ga0066696_10001736All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes9456Open in IMG/M
3300006049|Ga0075417_10002861All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium5328Open in IMG/M
3300006049|Ga0075417_10226181All Organisms → cellular organisms → Bacteria892Open in IMG/M
3300006058|Ga0075432_10356907All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium621Open in IMG/M
3300006173|Ga0070716_101322150All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium583Open in IMG/M
3300006755|Ga0079222_10094253All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1553Open in IMG/M
3300006791|Ga0066653_10249064All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium905Open in IMG/M
3300006794|Ga0066658_10635066All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium584Open in IMG/M
3300006800|Ga0066660_10736712All Organisms → cellular organisms → Bacteria805Open in IMG/M
3300006844|Ga0075428_100038376All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium5271Open in IMG/M
3300006844|Ga0075428_102331765All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium550Open in IMG/M
3300006845|Ga0075421_100245429All Organisms → cellular organisms → Bacteria2198Open in IMG/M
3300006845|Ga0075421_102196508All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium583Open in IMG/M
3300006852|Ga0075433_10002072All Organisms → cellular organisms → Bacteria15157Open in IMG/M
3300006854|Ga0075425_100446018All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1490Open in IMG/M
3300006871|Ga0075434_100395251All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1403Open in IMG/M
3300007258|Ga0099793_10043479All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1957Open in IMG/M
3300007265|Ga0099794_10074070All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1672Open in IMG/M
3300009012|Ga0066710_102802626All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium689Open in IMG/M
3300009137|Ga0066709_103895395All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium542Open in IMG/M
3300009807|Ga0105061_1057499All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium607Open in IMG/M
3300009809|Ga0105089_1089948All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium532Open in IMG/M
3300010320|Ga0134109_10137204All Organisms → cellular organisms → Bacteria874Open in IMG/M
3300010326|Ga0134065_10431026All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium536Open in IMG/M
3300010335|Ga0134063_10141548All Organisms → cellular organisms → Bacteria1112Open in IMG/M
3300010360|Ga0126372_10032962All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium3284Open in IMG/M
3300010360|Ga0126372_10446200All Organisms → cellular organisms → Bacteria1197Open in IMG/M
3300010366|Ga0126379_10912845All Organisms → cellular organisms → Bacteria981Open in IMG/M
3300010376|Ga0126381_103939591All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium578Open in IMG/M
3300012096|Ga0137389_11078768All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300012189|Ga0137388_10751468All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium905Open in IMG/M
3300012199|Ga0137383_10443802All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium951Open in IMG/M
3300012202|Ga0137363_10072509All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2539Open in IMG/M
3300012202|Ga0137363_11826364All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium500Open in IMG/M
3300012203|Ga0137399_10549133All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium970Open in IMG/M
3300012203|Ga0137399_11681007All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium523Open in IMG/M
3300012205|Ga0137362_10080147All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2721Open in IMG/M
3300012209|Ga0137379_11673679All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium533Open in IMG/M
3300012211|Ga0137377_10498054All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1157Open in IMG/M
3300012224|Ga0134028_1144138All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium549Open in IMG/M
3300012399|Ga0134061_1365647All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium509Open in IMG/M
3300012404|Ga0134024_1424849All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium518Open in IMG/M
3300012685|Ga0137397_10214775All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1432Open in IMG/M
3300012917|Ga0137395_11119272All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium557Open in IMG/M
3300012918|Ga0137396_10093858All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2132Open in IMG/M
3300012923|Ga0137359_11776917All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300012925|Ga0137419_10399128All Organisms → cellular organisms → Bacteria1074Open in IMG/M
3300012930|Ga0137407_10016145All Organisms → cellular organisms → Bacteria → Proteobacteria5460Open in IMG/M
3300012948|Ga0126375_11721755All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium544Open in IMG/M
3300012971|Ga0126369_11005546All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium921Open in IMG/M
3300012972|Ga0134077_10053763All Organisms → cellular organisms → Bacteria1490Open in IMG/M
3300012975|Ga0134110_10129995All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1032Open in IMG/M
3300014154|Ga0134075_10108518All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1175Open in IMG/M
3300014157|Ga0134078_10459281All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium584Open in IMG/M
3300015264|Ga0137403_10121079All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2608Open in IMG/M
3300015357|Ga0134072_10031651All Organisms → cellular organisms → Bacteria1385Open in IMG/M
3300015358|Ga0134089_10057347All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1431Open in IMG/M
3300018431|Ga0066655_10001300All Organisms → cellular organisms → Bacteria8920Open in IMG/M
3300018431|Ga0066655_10408849All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium895Open in IMG/M
3300018433|Ga0066667_10198348All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1472Open in IMG/M
3300018468|Ga0066662_10608464All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1024Open in IMG/M
3300018482|Ga0066669_10000870All Organisms → cellular organisms → Bacteria10665Open in IMG/M
3300018482|Ga0066669_10040858All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2843Open in IMG/M
3300019789|Ga0137408_1092168All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2402Open in IMG/M
3300020170|Ga0179594_10028394All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1764Open in IMG/M
3300020170|Ga0179594_10281352All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium629Open in IMG/M
3300024330|Ga0137417_1317198All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium557Open in IMG/M
3300025910|Ga0207684_10004276All Organisms → cellular organisms → Bacteria13536Open in IMG/M
3300025910|Ga0207684_10059776All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium3236Open in IMG/M
3300025922|Ga0207646_10007381All Organisms → cellular organisms → Bacteria11186Open in IMG/M
3300025939|Ga0207665_11477874All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium540Open in IMG/M
3300026295|Ga0209234_1075536All Organisms → cellular organisms → Bacteria1279Open in IMG/M
3300026295|Ga0209234_1291927All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium524Open in IMG/M
3300026296|Ga0209235_1016935All Organisms → cellular organisms → Bacteria3948Open in IMG/M
3300026300|Ga0209027_1028166All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2127Open in IMG/M
3300026301|Ga0209238_1064240All Organisms → cellular organisms → Bacteria → Proteobacteria1298Open in IMG/M
3300026306|Ga0209468_1107183All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium880Open in IMG/M
3300026308|Ga0209265_1120394All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium663Open in IMG/M
3300026309|Ga0209055_1221601All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium579Open in IMG/M
3300026312|Ga0209153_1060166All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1362Open in IMG/M
3300026315|Ga0209686_1018518All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2794Open in IMG/M
3300026315|Ga0209686_1133389All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium798Open in IMG/M
3300026316|Ga0209155_1026002All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2407Open in IMG/M
3300026322|Ga0209687_1136762All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium788Open in IMG/M
3300026323|Ga0209472_1053949All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1716Open in IMG/M
3300026324|Ga0209470_1019757All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium3678Open in IMG/M
3300026325|Ga0209152_10252794All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium655Open in IMG/M
3300026330|Ga0209473_1100303All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1209Open in IMG/M
3300026331|Ga0209267_1037419All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2271Open in IMG/M
3300026342|Ga0209057_1103157All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1136Open in IMG/M
3300026542|Ga0209805_1190709All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium894Open in IMG/M
3300026547|Ga0209156_10313309All Organisms → cellular organisms → Bacteria704Open in IMG/M
3300026550|Ga0209474_10025193All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium4535Open in IMG/M
3300026551|Ga0209648_10838833All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium503Open in IMG/M
3300026552|Ga0209577_10060534All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium3165Open in IMG/M
3300027181|Ga0208997_1041250All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium681Open in IMG/M
3300027873|Ga0209814_10004416All Organisms → cellular organisms → Bacteria5321Open in IMG/M
3300027909|Ga0209382_10078499All Organisms → cellular organisms → Bacteria → Proteobacteria3893Open in IMG/M
3300031820|Ga0307473_10225532All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1131Open in IMG/M
3300032180|Ga0307471_100537146All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1322Open in IMG/M
3300033813|Ga0364928_0072004All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium786Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil27.89%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil15.65%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil12.93%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil8.16%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere8.16%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere8.16%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.08%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil4.08%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil4.08%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.36%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.36%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.36%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.68%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.68%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.68%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.68%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300002562Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002917Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cmEnvironmentalOpen in IMG/M
3300003203Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300004062Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2EnvironmentalOpen in IMG/M
3300004267Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBioEnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009807Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10EnvironmentalOpen in IMG/M
3300009809Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012224Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012399Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012404Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026300Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026306Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)EnvironmentalOpen in IMG/M
3300026308Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)EnvironmentalOpen in IMG/M
3300026309Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)EnvironmentalOpen in IMG/M
3300026312Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)EnvironmentalOpen in IMG/M
3300026315Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)EnvironmentalOpen in IMG/M
3300026316Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)EnvironmentalOpen in IMG/M
3300026322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)EnvironmentalOpen in IMG/M
3300026323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300026330Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026342Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027181Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033813Sediment microbial communities from East River floodplain, Colorado, United States - 30_j17EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10145500523300000364SoilMNRLTVDERRRANELRRMGAVRRAPRALAFEDVGIGTGWKRNARVATLISLVLGGILVLLQFAHTLSLYGPGSLLNWLLPRL*
JGI12053J15887_1038603513300001661Forest SoilMNRLTVDERRRANELRRVAATTRAPRAVTLDQLEPRGAGWGRNARIATLVTLALGGALAVVQLAQTLSLYGPGSVLDWLLP
JGI25385J37094_1001753733300002558Grasslands SoilMSRLTADERRRANELRRLGARMRAARVVTIEHLEPREAGWGRGARVTTLVTVALGGALALLHLAQTLSLYGPGSLLDWLLPRL*
JGI25385J37094_1022443313300002558Grasslands SoilMSRLTADERRRANELRRLGARMRAPRVVTIEHLEPREVGWGRGARVTTLVTVALGGALALLHLAQTLSLYGPGSLLDWLLPRL*
JGI25382J37095_1015270223300002562Grasslands SoilMSRLTADERRRANELRRLGARMRAARVVTIEHLEXREAGWGRGARVTTLVTVALGGALALLHLAQTLSLYGPGSLLDWLLPRL*
JGI25382J43887_1003376713300002908Grasslands SoilMSRLTADERRRANELRRLGARMRAARVVTIEHLERREAGWGRGARVTTLVTVALGGALALLHLAQTLSLYGPGSLLDWLLPRL*
JGI25616J43925_1021357123300002917Grasslands SoilMNRLTVDERRRANERRRVAATTRVPRAITLEHLEPRGAGWGRNARIATLVTLALGGALAVFQLAQTLSLYGPGSVLDWLLPRL*
JGI25406J46586_1002312123300003203Tabebuia Heterophylla RhizosphereMNRLTADERRRANELRRMGTTARAPRALAVEDFDRSIPASWMRNARVGTLITLALAALLAFLQVAQTVSVHGAGSLLDWLLPRL*
Ga0055500_1007680113300004062Natural And Restored WetlandsADERRRASELRRIGDTRRAPRAVTVEQLEARGEGWRRNARVATLVTVAVGGLLAVLHLAQSLQGPGSMLDWLLPRL*
Ga0066396_1010850413300004267Tropical Forest SoilMNRLTADERRRANELRRTGASRRAPRTLTLEHIGAGWKRNARVATLITLVLGGALVLLQFAHTLSLSGPGSLLDWLLPRL*
Ga0066674_1002911433300005166SoilMNRLTVDERRRANELRRLSTTLGAPRALAVEELGERTGAGWGRNARLATLITVILGGVLALLQLAQTLSLHGPGSLLDWLLPRL*
Ga0066672_1038009423300005167SoilMNRLTVDERRRANELRRVAATTRAPQAITLEHLEPRGAGWGRNARIATLVTLAVGGALAVLQLAQTLSLYGPGSVLDWLLPRL*
Ga0066677_1002744633300005171SoilMNRLTVDERRRANELRRLSTTPGAPRALAVEELGERTGAGWGRNARLATLITVILGGVLALLQLAQTLSLYGPGSLLDWLLPRL*
Ga0066677_1025029913300005171SoilMNRLTVDERRRANELRRVAGTTRAPRAVTLEHLEPRGEGWGRNARIATLVTLAVGGALAVLQLAQTLSLYGPGSVLDWLLPRL*
Ga0066677_1031598923300005171SoilMNRLTVDERRRANELRRVAATTRAPRAVTLEHLEPRGAGWGRNARIATLVTLALGGALAVLQLAQTLSLYGPGSVLDWLLPRL*
Ga0066680_1018589513300005174SoilMNRLTVDERRRANELRRVAATTRAPRAVTLEHLEPRGAGWGRNARIATLVTLAVGGALAVLQLAQTLSLYGPGSVLDWLLPRL*
Ga0066679_1056066613300005176SoilDERRRANELRRVAGTTRAPRAVTLEHLEPRGEGWGRNARIATLVTLAVGGALAVLQLAQTLSLYGPGSVLDWLLPRL*
Ga0066688_1017346023300005178SoilMNRLTVDERRRATELRRLSTTLGAPRALAVEELGERTGAGWGRNARLATLITVILGGVLALLQLAQTLSLYGPGSLLDWLLPRL*
Ga0066678_1016560613300005181SoilMSRLTADERRRANDLRRLGARMRAARVVTIEHLEPREAGWGRGARVTTLVTVALGGALALLHLAQTLSLYGPGSLLDWLLPRL*
Ga0066678_1061003013300005181SoilMNRLTVDERRRANELRRVAATTRAPRAVTLEHLEPRGEGWGRNARIATLVTLAVGGALAVLQLAQTLSLYGPGSVLDWLLPRL*
Ga0066671_1002410333300005184SoilVDERRRANELRRLSTTPGAPRALAVAELEERTGAGWGRNARLATLITVILGGVLALLQLAQTLSLYGPGSLLDWLLPRL*
Ga0066671_1081954713300005184SoilMNRLTVDERRRANELRRVAATTRAPRAITLEHLEPRGAGWGRNARIATLVTSAVGGALAVLQLAQTLSLYGPGSVLDWLLPRL*
Ga0066676_1015015813300005186SoilMNRLTADERRRANELRRLSTTLGAPRAVAIEDLHERTSAGWGRNARLATLVTVILGGALALLQLAQALSLYGAGPLLDWLLPRL*
Ga0066676_1022086713300005186SoilMNRLTVDERRRANELRRVAATTRAPRAVTLEHLEPRGAGWGRNARIATLITLAVGGALAVLQLAQTLSLYGPGSVLDWLLPRL*
Ga0066675_1002868023300005187SoilMNRLTVDERRRANELRRLSTTLGAPRALAVEELGERTGAGWGRNARLATLITVILGGVLALLQLAQTLSLYGPGSLLDWLLPRL*
Ga0066675_1009211023300005187SoilMNRLTVDERRRANELRRVAATTRAPRAVTLEHLEPRGAGWGRNARIATLVTLAVGGAFAVLQLAQTLSLYGPGSVLDWLLPRL*
Ga0066388_10001098033300005332Tropical Forest SoilMNRLTVDERRRANELRRMGTARRAPRTVAHEYLYGGAGWTRNARVAMLITLALGGILVILQVAHTLSLHGPGSLLDWLLPRL*
Ga0066388_10032181123300005332Tropical Forest SoilMTRMTADERRRANELRKMPATSASRAVAVRDTSAGWGRNARLATLITLILGGLLAVLQLAQALSLHGPGSLLDWLLPRL*
Ga0066388_10057902323300005332Tropical Forest SoilMNRLTVDERRRANELRRIGASRRVPRTLALEHAGIGAGWRRNARVATRISLVLGGILVLLQFAHTLSLYGPDSLLDWLLPRL*
Ga0066388_10333720723300005332Tropical Forest SoilMTRLTPDERRRANELRRSSTRGNAPRALVFDDPRMRLGLKRNARLAALLTLVVGGVLVLLQLAHALSLYGPGSLLDWLLPRV*
Ga0070708_10001560523300005445Corn, Switchgrass And Miscanthus RhizosphereMNRLTVDERRRANELRRMGATTRPPRALVLDDLRVGTGWRRNARVATLISLVLGGVLVLLQLAHTLAIYGPGSLLDWLLPRL*
Ga0070708_10020070013300005445Corn, Switchgrass And Miscanthus RhizosphereMNRLTVDERRRANELRRVATTTRAPRAVTLEHLEPRGAGWGRNARLAALVTLALGGALAVLQLAHTLSLYGPGSVLDWLLPRL*
Ga0070708_10076620023300005445Corn, Switchgrass And Miscanthus RhizosphereMNRLTVDERRRANELRRVGTARLAPRALVLDDLRVSASWKRNARVATVIALALGGVFALLQLAHTLSLYGPGSLLDVLLPRV*
Ga0070708_10122970423300005445Corn, Switchgrass And Miscanthus RhizosphereMNRMTVDERRRATELRRIGATIRAPRAVAIEDLRVGAGWKRNARVATLVTLALGGVLALLQLTHTLS
Ga0066686_1043058123300005446SoilMSRLTADERRRANELRRLGARMRAPRVVTIEHLEPREVGWGRGARVTTLVTVALGGALALLHLAQTLSLYGPGSLLDW
Ga0070698_10017036923300005471Corn, Switchgrass And Miscanthus RhizosphereMNRLTVDERRRANELRRMGATTRPPRALVLDDLRVGTGWRRNARVATLISLVLGGVLVLLQLAHTLAIYGPVSLLDWLLPRL*
Ga0070697_10045414523300005536Corn, Switchgrass And Miscanthus RhizosphereMNRLTVDERRRANELRRVGPTSLAPRALVLDDLRVGAGWRRNARVATLISLALGGVLALLQLAHTLSLYAPGSLLDLLLPRL*
Ga0070697_10051740513300005536Corn, Switchgrass And Miscanthus RhizosphereMNRLTVDERRRANELRRVAATTRAPRAITVEHLEPRGAGWGRNARIATLVTLALGGSLAVLQLAQTLSLYGPGS
Ga0066697_1005535323300005540SoilMNRLTVDERRRANELRRLSTTPGAPRALAVEELGERTGAGWGRNARLAMLITVILGGVLALLQLAQTLSLYGPGSLLDWLLPRL*
Ga0066692_1070199623300005555SoilMNRLTVDERRRANELRRVAATTRAPRAVTLEHLEPRGAGWGRNARIATLVTLAVGGALAVLQLAQTLSLYG
Ga0066700_1035361713300005559SoilMNRLTVDERRRANELRRVAATTRAPRAVTLEHLEPRGAGWGRNARIATLVTLAVGGALAVLQLAQTL
Ga0066699_1011283233300005561SoilMNRLTVDERRRANELRRVAATTRAPRAITLEHLEPRGAGWGRNARIATLVTLAVGGALAVLQLAQTLSLYGPGSVLDWLLPRL*
Ga0066708_1078041713300005576SoilMNRLTVDERRRANELRRVAGTTRAPRAVTLEHLEPRGEGWGRNARIATLVTLAVGGALAVLQLAQTL
Ga0066654_1003059133300005587SoilMNRLTVDERRRANELRRLSTTPGAPRALAVEELGERTGAGWGRNARLATLITVILGGVLALLQLAQTLSLYGAGSLLDWL
Ga0066905_10204040513300005713Tropical Forest SoilMSRLTVDERRRANELRQMGTTRLAPRALVLDDLRVASGWRRNARVATLISLVLGGLLVLLQLAHTLAIHGPGSLLDWLLPRL*
Ga0066696_1000173663300006032SoilMNRLTVDERRRANELRRLSTTPGAPRALAVEELGERTGAGWGRNARLATLITVILGGVLALLQLAQTLSLYGAGSLLDWLLPRL*
Ga0066696_1010123213300006032SoilMNRLTVDERRRANELRRVAATTRAPRAITLEHLEPRGAGWGRNARIATLVTLAVGGALAVLQLAQTL
Ga0075417_1000286123300006049Populus RhizosphereMNRLTADERRRANELRRMGTTARAPRALAVADFDRSIPASWIRNARVGTLITLALGALLAFLQLAQTVSLHGAGSLLDWLLPRL*
Ga0075417_1022618113300006049Populus RhizosphereMNRLTVDERRRANDLRRIGASRRAPRTLALEHAGIGAGWKRNARVATLISLVLGGLLVLLQFAHTLSLYGPGSLLDWLLPRL*
Ga0075432_1035690713300006058Populus RhizosphereMNRLTVDERRRANDLRRIGASRRAPRTLALEHAGIGAGWRRNARVATLISLVLGGILML
Ga0070716_10132215013300006173Corn, Switchgrass And Miscanthus RhizosphereMNRLTVDERRRANELRRVGATSLAPRALVLDDLRVGAGWRRNARVATLISLALGGVLALLQLAHTLSLYG
Ga0079222_1009425323300006755Agricultural SoilMNRLTTDERRRANELRRLNATPPASRAIALDRLPHRAEAGWGRNARVALTITVLLGAALALLQLAPALGLHGPASLIDWLLPRL*
Ga0066653_1024906413300006791SoilMNRLTVDERRRANELRRLSTTLGAPRALAVEELGERTGAGWGRNARLATLITVILGGVLALLQLAQTLSLHG
Ga0066658_1063506623300006794SoilMNRLTVDERRRANELRRVAATTRAPRAVTLEHLEPRGEGWGRNARIATLVTLAVGGALAVLQLAQTLSLYGPGYVLDWLLPRL*
Ga0066660_1073671223300006800SoilDERRRANELRRVAATTRAPQAITLEHLEPRGAGWGRNARIATLVTLALGGALAVLQLAQTLSLYGPGSVLDWLLPRL*
Ga0075428_10003837643300006844Populus RhizosphereMNRLTADERRRANELRRMGTTARAPRALAVEDFDRSIPASWIRNARVGTLITLALGALLAFLQLAQTVSLHGAGSLLDWLLPRL*
Ga0075428_10233176513300006844Populus RhizosphereMNRLTVDERRRANEIRRLSTTLGAPRALAVHELGERTGAGWGRNARLATLVTVILAGVLALLQLAQTLSLYGPGSLLDWLLPRL*
Ga0075421_10024542933300006845Populus RhizosphereRANELRRIGASRRAPRTLALEHAGIGAGWKRNARVATLISLVLGGLLVLLQFAHTLSLYGPGSLLDWLLPRL*
Ga0075421_10219650813300006845Populus RhizosphereMNRLTVDERRRANELRRVGTTRLAPRALVLDDLRVGTGWRRNARVATLISLVLGGVLVLLQLAHTLAIYGPGSLLDWLLPRL*
Ga0075433_10002072113300006852Populus RhizosphereMNRLTVDERRRANELRRIGASRRAPRTLALEHAGIGAGWKRNARVATLISLVLGGLLVLLQFAHTLSLYGPGSLLDWLLPRL*
Ga0075425_10044601813300006854Populus RhizosphereMNRLTVDERRRANDLRRIGASRRAPRTLALEHAGIGAGWRRNARVATLIVLVLGGILMLLQFAHTLSLYGPGSLLDWLLPRL*
Ga0075434_10039525123300006871Populus RhizosphereMNRLTVDERRRANDVRRIGASRRAPRTLALEHAGIGAGWRRNARVATLIVLVLGGILMLLQFAHTLSLYGPGSLLDWLLPRL*
Ga0099793_1004347923300007258Vadose Zone SoilMNRLTVDERRRANELRRVAAPTRVPRAITLEHLEPRGVGWGRNARIATLVTLALGGALAVLQLAQTLSLYGPGSVLDWLLPRL*
Ga0099794_1007407013300007265Vadose Zone SoilMSRLTADERRRANELRRIGAKMSVPRAITIEHLEAREAGEAAWGRGARVTTLVTVALGAALALVQLAQQLAVYGAASWLDWLLPRL*
Ga0066710_10280262623300009012Grasslands SoilMNRLTVDERRRANELRRLSTTLGAPRALAVEELGERTGAGWGRNARLATLITVILGGVLALLQLAQTLSLHGPGSLLDWLL
Ga0066709_10389539513300009137Grasslands SoilMNRLTVDERRRANELRRLSTTLGAPRALAVEELGERTGAGWGRNARLATLITVILGGVLALLQLAQTLSL
Ga0105061_105749913300009807Groundwater SandMSRLTVAERRRAKELRSLQSTPRAPRALTLEPLDTRGQGWGKNARLAALLGIGLGGAFAVVQLVQQLALYGPGSLLDWLLPRL*
Ga0105089_108994813300009809Groundwater SandMNRLTVDERRRANELRRVGATIGAHRAVTVEHLEQRGTGWGRNARVATLITVALVATLALLQLAQTLSLYGPASVLDWLLPRL*
Ga0134109_1013720413300010320Grasslands SoilTADERRRANELRRLGARMRAPRVVTIEHLEPREVGWGRGARVTTLVTVALGGALALLHLAQTLSLYGPGSLLDWLLPRL*
Ga0134065_1043102613300010326Grasslands SoilMNRLTVDERRRANELRRVAATTRAPRAVTLEHLEPRGAGWGRNARIATLITLAVGGALAVLQLAQTLSLYGPGSVLDGLLPRL*
Ga0134063_1014154813300010335Grasslands SoilPLALEWGGGVAPMNRLTVDERRRANELRRVAATTRAPRAVTLEHLEPRGAGWGRNARIATLVTLAVGGAFAVLQLAQTLSLYGPGSVLDWLLPRL*
Ga0126372_1003296223300010360Tropical Forest SoilMNRLTVDERRRANELRRMGTARRAPRTVAPEYLYGGAGWTRNARVAMLITLALGGILVILQVAHTLSLHGPGSLLDWLLPRL*
Ga0126372_1044620023300010360Tropical Forest SoilNRLTADERRRANELRRTGASRRAPRTLTLEHIGAGWKRNARVATLITLVLGGALVLLQFAHTLSLSGPGSLLDWLLPRL*
Ga0126379_1091284523300010366Tropical Forest SoilMNRLTVDERRRANELRRMGTARRAPRTVAPEYLYGGAGWTRNARVAMLITLALGGILVILQVAHTLSLHGPGSLLDWLVPRL*
Ga0126381_10393959113300010376Tropical Forest SoilMNRLTVDERRRANELRRIGASRRVPRTLALEHAGIGAGWRRNARVATRISLVLGGILVLLQF
Ga0137389_1107876823300012096Vadose Zone SoilMNRLTVDERRRANELRRVAATTRAPRAITLEHLEPRGAGWGRNARIATLVTLALGGALAVLQLAQTLSLYGPGSVLDWLLPRL*
Ga0137388_1075146823300012189Vadose Zone SoilMNRLTVDERRRANELRRVAATTRAPRAITLEHLEPRGAGWGRNARIATLVTLALGGALAVLQLAQTLSLYGPGSLLDWLLPRL*
Ga0137383_1044380223300012199Vadose Zone SoilMSRLTADERRRANELRRLGARMRAPRVVTSEHLEPREVGWGRGARVTTLVTVALGGALALLHLAQTLSLYGPGSLLDWLLPRL*
Ga0137363_1007250913300012202Vadose Zone SoilLRRVAAPTRVPRAITLEHLEPRGVGWGRNARIATLVTLALGGALAVLQLAQTLSLYGPGSVLDWLLPRL*
Ga0137363_1182636423300012202Vadose Zone SoilMNRLTVDERRRANELRRVAATTRAPRAITLEHLEPRGAGWGRNARIATLVTLAVGGALAVFQLAQTLSLYGPGSVLDWLLPRL*
Ga0137399_1054913323300012203Vadose Zone SoilMSRLTAGERRRANDLRRLRVRMRAPRVVTVEHLERRDAGWGRGARVTMLVTVALGGALALLQLAQTLSLYGPGSLLDWLLPRL*
Ga0137399_1168100723300012203Vadose Zone SoilMNRLTVDERRRANELRRVAATTRAPRAITLEHLEPRGAGWGRNARIATLVTLALGGSLAVLQLAQTLSLYGPGSVLDWLLPRL*
Ga0137362_1008014723300012205Vadose Zone SoilMNRLTVDERRRANELRRVAATTRVPRAITLEHLEPRGAGWGRNARIATLVTLALGGALAVLQLAQTLSLYGPGSVLDWLLPRL*
Ga0137379_1167367913300012209Vadose Zone SoilMSRLTADERRRANELRRLGARMRAPRVVTIEHLEPREVGWGRGARVTTLVTVALGGALALLHLAQTLSLYGPGS
Ga0137377_1049805423300012211Vadose Zone SoilMNRLTVDERRRTNELRRLSEMVRDPRAVTAHELAHQAAPNWGRNARVASLITLVLGGALVLLQLAQTLSLYGPGSLLDWLLPRL*
Ga0134028_114413823300012224Grasslands SoilCTMSRLTADERRRANELRRLGARMRAPRVVTIEHLEPREVGWGRGARVTTLVTVALGGALALLHLAQTLSLYGPGSLLDWLLPRL*
Ga0134061_136564713300012399Grasslands SoilMNRLTVDERRRANELRRLSTTLGAPRALAVEELGERTGAGWGRNARLATLITVILGGVLALLQLAQTFSLHGPGSLLDWLLPRL*
Ga0134024_142484913300012404Grasslands SoilVDGGGKDRWRRAADERRRANELRRLGARMRAPRVVTIEHLEPREVGWGRGARVTTLVTVALGGALALLHLAQTLSLYGPGSLLDWLLPRL*
Ga0137397_1021477523300012685Vadose Zone SoilMNRLTVDERRRANELRRVAATTRAPGAITLEHLEPRGAGWGRNARIATLVTLALGGSLAVLQLAQTLSLYGPGSVLDWLLPRL*
Ga0137395_1111927213300012917Vadose Zone SoilVRGKPLALELGGGVTPMNRLTVDERRRANELRRVAATTRAPRAITLEHLEPRGAGWGRNARIATLVTLAVGGALAVLQLAQTLSLYGPGSVLDWLLPRL*
Ga0137396_1009385823300012918Vadose Zone SoilMSRLTADERRRANELRRVGATLRAPRAVALEHLQPHTGGWGRSAKVATLVTVALGAALVFLQLAETLSLYGPGSLLDWLLPRL*
Ga0137359_1177691723300012923Vadose Zone SoilRRVAATTRAPRAVTLEHLEPRGAGWGRNARIATLVTLAVGGALAVLQLAQTLSLYGPGSVLDWLLPRL*
Ga0137419_1039912823300012925Vadose Zone SoilMNRLTVDERRRANELRRVAATTRAPRAVTLEHLEPRGAGWGRNARIATLVTLALGGALAVLQLAQTLSLYGPGSVLDWLVPRL*
Ga0137407_1001614523300012930Vadose Zone SoilMNRLTADERRRANELRRLSTTLGAPRAVAIEDLHERTSAGWGRNARLATLVTVILGGALALLQLAQALSLYGPGPLLDWLLPRL*
Ga0126375_1172175513300012948Tropical Forest SoilMNRLTVDERRRANELRRIGASRRVPRTLALEHAGIGAGWRRNARVATRISLVLGCILVLLQFAHTLSLYGPDSLL
Ga0126369_1100554613300012971Tropical Forest SoilMNRLTVDERRRANELRRIGASHRAPRTLALEHAGIAAGWKRNARVATLISLVLGSILVLLQFAHTLSLHGPGSLVDWLLPRL*
Ga0134077_1005376323300012972Grasslands SoilMNRLTADERRRAHELRRLSTTLGAPRAVAIEDLHERTSAGWGRNARLATLVTVILGGALALLQLAQALSLYGAGPLLDWLLPRL*
Ga0134110_1012999523300012975Grasslands SoilMNRLTVDERRRANELRRVAGTTRAPRAVTLEHLEPRGAGWGRNARIATLVTLAVGGALAVLQLAQTLSLYGPGSVLDWLLPRL*
Ga0134075_1010851813300014154Grasslands SoilMNRLTVDERRRANELRRLSTTLGAPRALAVEELGERTGAGWGRNARLAMLITVILGGVLALLQLAQTLSLYGPGSLLDWLLPRL*
Ga0134078_1045928123300014157Grasslands SoilVDERRRANELRRLSTTLGAPRALAVEELGERTGAGWGRNARLATLITVILGGVLALLQLAQTLSLYGPGSLLDWLLPRL*
Ga0137403_1012107933300015264Vadose Zone SoilMNRLTADERRRAHELRRLSTTLGAPRAVAIEDLHERTSAGWGRNARLATLVTVILGGALALLQLAQALSLYGPGPLL
Ga0134072_1003165113300015357Grasslands SoilRLTVDERRRANELRRLSTTLGAPRALAVEELGERTGAGWGRNARLATLITVILGGVLALLQLAQTLSLYGPGSLLDWLLPRL*
Ga0134089_1005734723300015358Grasslands SoilMNRLTADERRRANELRRLSTTLGAPRAVAIEDLHERTSAGWGRNARLATLVTVIVGGALALLQLAQALSLYGAGPLLDWLLPRL*
Ga0066655_1000130053300018431Grasslands SoilMSRLTADERRRANELRRLGARMRAPRVVTIEHLEPREVGWGRGARVTTLVTVALGGALALLHLAQTLSLYGPGSLLDWLLPRL
Ga0066655_1040884923300018431Grasslands SoilMNRLTVDERRRANELRRLSTTLGAPRALAVEELGERTGAGWGRNARLATLITVILGGVLALLQLAQTLSLYGPGSLLDWLLPRL
Ga0066667_1019834813300018433Grasslands SoilMNRLTVDERRRANELRRLSTTPGAPRALAVEELGERTGAGWGRNARLATLITVILGGVLALLQLAQTLSLYGPGSLLDWLLPRL
Ga0066662_1060846413300018468Grasslands SoilMNRLTVDERRRANELRRVAGTTRAPRAVTLEHLEPRGEGWGRNARIATLVTLAVGGALAVLQLAQTLSLYGPGSVLDWLLP
Ga0066669_1000087033300018482Grasslands SoilMNRLTVDERRRATELRRLSTTLGAPRALAVEELGERTGAGWGRNARLATLITVILGGVLALLQLAQTLSLHGPGSLLDWLLPRL
Ga0066669_1004085813300018482Grasslands SoilMNRLTVDERRRANELRRVAATTRAPRAVTLEHLEPRGAGWGRNARIATLVTLAVGGALAVLQLAQTLSLYGPGSVLDWLLPRL
Ga0137408_109216833300019789Vadose Zone SoilMSRLTADERRRANELRRLGARMRAPRVVTIEQLEPREVAWGRGARVTTLVTLALGGALALLQLAQTLSLYGPGSFLDWLLPRL
Ga0179594_1002839413300020170Vadose Zone SoilMNRLTADERRRAHELRRLSTTLGAPRAVAIEDLHERTSAGWGRNARLATLVTVILGGALALLQLAQALSLYGPGPLLDWLLPRL
Ga0179594_1028135223300020170Vadose Zone SoilMNRLTVDERRRANELRRVAGTTRAPRAVTLEHLEPRGAGWGRNARIATLVTLAVGGALAVLQLAQTLSLYGPGSVLDWLLPRL
Ga0137417_131719813300024330Vadose Zone SoilMNRLTVDERRRANELRRVAAPTRVPRAITLEHLEPRGVGWGRNARIATLVTLALGGALAVLQLAQTLSLYGPGSVLDWLLPRL
Ga0207684_1000427623300025910Corn, Switchgrass And Miscanthus RhizosphereMNRLTVDERRRANELRRMGATTRPPRALVLDDLRVGTGWRRNARVATLISLVLGGVLVLLQLAHTLAIYGPGSLLDWLLPRL
Ga0207684_1005977643300025910Corn, Switchgrass And Miscanthus RhizosphereMNRLTVDERRRANELRRVGTARLAPRALVLDDLRVSASWKRNARVATVIALALGGVFALLQLAHTLSLYGPGSLLDVLLPRV
Ga0207646_1000738123300025922Corn, Switchgrass And Miscanthus RhizosphereMNRLTVDERRRANELRRVGTARLAPRALVLDDLRVSASWKRNARVATVIALALGGVFALLQLAHTLSLYGPGTLAIYGPGSLLDWLLPRL
Ga0207665_1147787413300025939Corn, Switchgrass And Miscanthus RhizosphereMNRLTVDERRRANELRRVGATSLAPRALVLDDLRVGAGWRRNARVATLISLALGGVLALLQLAHTLSLYGPG
Ga0209234_107553623300026295Grasslands SoilMNRLTVDERRRANELRRVAATTRAPRAVTLEHLEPRGAGWGRNARIATLVTLALGGALAVLQLAQTLSLYGPGSVLDWLLPRL
Ga0209234_129192713300026295Grasslands SoilMNRLTVDERRRANELRRVAGTTRAPRAVTLEHLEPRGEGWGRNARIATLVTLAVGGALAVLQLAQTLSLYGPGSVLDWLLPRL
Ga0209235_101693523300026296Grasslands SoilMSRLTADERRRANELRRLGARMRAARVVTIEHLEPREAGWGRGARVTTLVTVALGGALALLHLAQTLSLYGPGSLLDWLLPRL
Ga0209027_102816623300026300Grasslands SoilMNRLTVDERRRANELRRVAATTRAPRAITLEHLEPRGAGWGRNARIATLVTLALGGALAVLQLAQTLSLYGPGSVLDWLLPRL
Ga0209238_106424023300026301Grasslands SoilMNRLTVDERRRANELRRVAATTRAPRAITLEHLEPRGAGWGRNARIATLVTLALGGALAVLQLAQTLSLYGPGSVLDWLLPGALL
Ga0209468_110718323300026306SoilMNRLTVDERRRANELRRLSTTLGAPRALAVEELGERTGAGWGRNARLATLITVILGGVLALLQLAQTLSLHGPGSLLDWLLPRL
Ga0209265_112039423300026308SoilMNRLTVDERRRANELRRLSTTPGAPRALAVEELGERTGAGWGRNARLATLITVILGGVLALLQLAQTLSLYGAGS
Ga0209055_122160113300026309SoilMNRLTVDERRRANELRRVAGTTRAPRAVTLEHLEPRGEGWGRNARIATLVTLALGGALAVLQLAQTLSLYGPGSVLDWLLPRL
Ga0209153_106016623300026312SoilMNRLTVDERRRANELRRLSTTPGAPRALAVAELEERTGAGWGRNARLATLITVIVGGVLALVQLAQTLS
Ga0209686_101851833300026315SoilMNRLTVDERRRANELRRLSTTPGAPRALAVEELGERTGAGWGRNARLATLITVILGGVLALLQLAQTLSLYGAGSLLDWLLPRL
Ga0209686_113338913300026315SoilMNRLTVDERRRANELRRVAGTTRAPRAVTLEHLEPRGEGWGRNARIATLVTLAVGGALAVLQLAQTLSLYGPGSVL
Ga0209155_102600223300026316SoilMNRLTVDERRRANELRRVPATTRAPRAVTLEHLEPRGAGWGRNARIATLVTLAVGGALAVLQLAQTLSLYGPGSVLDWLLPRL
Ga0209687_113676223300026322SoilMNRLTVDERRRATELRRLSTTLGAPRALAVEELGERTGAGWGRNARLATLITVILGGVLALLQLAQTLSLYGPGSLLDWLLPRL
Ga0209472_105394923300026323SoilMNRLTVDERRRANELRRVAATTRAPRAVTLEHLEPRGAGWGRNARIATLVTLADGGALAVLQLAQTLSLYGPGSVLDWLLPRL
Ga0209470_101975723300026324SoilMNRLTADERRRANELRRLSTTLGAPRAVAIEDLHERTSAGWGRNARLATLVTVILGGALALLQLAQALSLYGAGPLLDWLLPRL
Ga0209152_1025279423300026325SoilMNRLTVDERRRANELRRVAATTRAPRAVTLEHLEPRGAGWGRNARIATLVTLAVGGALAVLQLAQTLSLYGPGYVLDWLLPRL
Ga0209473_110030323300026330SoilMNRLTVDERRRANELRRVAATTRAPRAITLEHLEPRGAGWGRNARIATLVTLALGGALAVLQLAQTLSLYGPGSV
Ga0209267_103741933300026331SoilDERRRANELRRVAATTRAPRAVTLEHLEPRGAGWGRNARIATLVTLAVGGALAVLQLAQTLSLYGPGSVLDWLLPRL
Ga0209057_110315723300026342SoilMNRLTVDERRRANELRRLSTTPGAPRALAVEELGERTGAGWGRNARLAMLITVILGGVLALLQLAQTLSLYGPGSLLDWLLPRL
Ga0209805_119070923300026542SoilMNRLTVDERRRATELRRLSTTLGAPRALAVEELGERTGAGWGRNARLATLITVIMGGVLALLQLAQTLSLYGPGSLLD
Ga0209156_1031330923300026547SoilDERRRANELRRVAATTRAPRAVTLEHLEPRGAGWGRNARIATLVTLAVGGAFAVLQLAQTLSLYGPGSVLDWLLPRL
Ga0209474_1002519333300026550SoilMNRLTVDERRRANELRRVAATTRAPRAVTLEHLEPRGAGWGRNARIATLVTLAVGGAFAVLQLAQTLSLYGPGSVLDWLLPRL
Ga0209648_1083883323300026551Grasslands SoilMNRLTVDERRRANERRRVAATTRVPRAITLEHLEPRGAGWGRNARIATLVTLALGGALAVFQLAQTLSLYGPGSVLDWLLPRL
Ga0209577_1006053443300026552SoilMNRLTVDERRRATELRRLSTTLGAPRALAVEELGERTGAGWGRNARLATLITVILGGVLALLQLAQTLSLYGPGSLLDWLLPR
Ga0208997_104125023300027181Forest SoilMNRLTVDERRRANELRRVAATTRVPRAITLEHLEPRGAGWGRNARIATLVTLALGGALAVVQLAQTLSLYGPGSVLDWLLPRL
Ga0209814_1000441643300027873Populus RhizosphereMNRLTADERRRANELRRMGTTARAPRALAVADFDRSIPASWIRNARVGTLITLALGALLAFLQLAQTVSLHGAGSLLDWLLPRL
Ga0209382_1007849933300027909Populus RhizosphereMNRLTVDERRRANELRRIGASRRAPRTLALEHAGIGAGWKRNARVATLISLVLGGLLVLLQFAHTLSLYGPGSLLDWLLPRL
Ga0307473_1022553213300031820Hardwood Forest SoilMNRMTVDERRRANELRRIGATIRAPRAVAIEDLRVGAGWKRNARVATLVTLALGGVFALLQLTHTLSLYGPGSLLDLLLPRL
Ga0307471_10053714613300032180Hardwood Forest SoilMNRLTVDERRRANELRRVATTTRAPRAVTLEHLEPRGAGWGRNARLAALVTLALGGALAVLQLAHTLSLYGPGSVLDWLLPRL
Ga0364928_0072004_188_4393300033813SedimentMSRLTADERRRANELRRVSATRRAPRAIMVEHFESHAAGWGRGARFATLVTVAAGAVLALAQLAQTLSLDGPASFLDWLLPRL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.