Metagenome / Metatranscriptome Family F049198

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F049198
Family Type	Metagenome / Metatranscriptome
Number of Sequences	147
Average Sequence Length	81 residues
Representative Sequence	KWQGHVVRIYKDESQMDIRGGVNTRSEDLRKIAYDSSTEWTKLGKPGQKDEVKEGSFVIVLGHVDDKGTLHATRIDLRLPR
Number of Associated Samples	117
Number of Associated Scaffolds	147

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.11 %
% of genes near scaffold ends (potentially truncated)	94.56 %
% of genes from short scaffolds (< 2000 bps)	91.16 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.80

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.639 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (36.735 % of family members)
Environment Ontology (ENVO)	Unclassified (35.374 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.177 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 5.50% β-sheet: 40.37% Coil/Unstructured: 54.13%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.80
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.80
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SCOP family	SCOP domain	Representative PDB	TM-score
b.40.4.0: Nucleic acid-binding proteins	d6nrza1	6nrz	0.83
b.40.4.1: Nucleic acid-binding proteins	d3a74a1	3a74	0.77
b.40.4.0: Nucleic acid-binding proteins	d6hcwa1	6hcw	0.77
b.40.4.0: Nucleic acid-binding proteins	d6ildb1	6ild	0.77
b.40.4.1: Nucleic acid-binding proteins	d1l0wa1	1l0w	0.76

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 147 Family Scaffolds
PF13646	HEAT_2	6.12
PF03544	TonB_C	2.04
PF01323	DSBA	1.36
PF08238	Sel1	0.68
PF12631	MnmE_helical	0.68
PF02954	HTH_8	0.68
PF13462	Thioredoxin_4	0.68
PF14534	DUF4440	0.68
PF00069	Pkinase	0.68
PF00877	NLPC_P60	0.68

COG ID	Name	Functional Category	% Frequency in 147 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.72
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	2.04
COG0791	Cell wall-associated hydrolase, NlpC_P60 family	Cell wall/membrane/envelope biogenesis [M]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.64 %
Unclassified	root	N/A	1.36 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.64 %
Unclassified	root	N/A	1.36 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.64 %
Unclassified	root	N/A	1.36 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	86.39 %
Unclassified	root	N/A	1.36 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	84.35 %
Unclassified	root	N/A	1.36 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	84.35 %
Unclassified	root	N/A	1.36 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001154\|JGI12636J13339_1034075	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300001412\|JGI20173J14856_1024691	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	892	Open in IMG/M
3300001471\|JGI12712J15308_10063298	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	937	Open in IMG/M
3300001867\|JGI12627J18819_10065710	All Organisms → cellular organisms → Bacteria → Acidobacteria	1510	Open in IMG/M
3300001867\|JGI12627J18819_10074304	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1412	Open in IMG/M
3300002245\|JGIcombinedJ26739_100648451	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	933	Open in IMG/M
3300002568\|C688J35102_118433646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300002907\|JGI25613J43889_10078552	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	885	Open in IMG/M
3300004135\|Ga0058884_1404065	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300004479\|Ga0062595_100442391	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	951	Open in IMG/M
3300004635\|Ga0062388_102124975	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300005176\|Ga0066679_10479795	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	812	Open in IMG/M
3300005176\|Ga0066679_10576122	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300005181\|Ga0066678_10373822	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	942	Open in IMG/M
3300005186\|Ga0066676_10197901	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1290	Open in IMG/M
3300005454\|Ga0066687_10157619	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1207	Open in IMG/M
3300005458\|Ga0070681_10627505	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300005546\|Ga0070696_100650684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	854	Open in IMG/M
3300005555\|Ga0066692_10671860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300005568\|Ga0066703_10162260	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1346	Open in IMG/M
3300005574\|Ga0066694_10456736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300005718\|Ga0068866_10029768	All Organisms → cellular organisms → Bacteria	2614	Open in IMG/M
3300005873\|Ga0075287_1035247	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300005888\|Ga0075289_1006693	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1493	Open in IMG/M
3300005921\|Ga0070766_10166708	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1359	Open in IMG/M
3300006052\|Ga0075029_100188565	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1283	Open in IMG/M
3300006172\|Ga0075018_10036444	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1992	Open in IMG/M
3300006914\|Ga0075436_101316720	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300007255\|Ga0099791_10579337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300007265\|Ga0099794_10433521	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300009089\|Ga0099828_11719851	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300009143\|Ga0099792_10372955	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300009143\|Ga0099792_10710263	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300009143\|Ga0099792_11216958	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300010043\|Ga0126380_10043761	All Organisms → cellular organisms → Bacteria	2369	Open in IMG/M
3300010865\|Ga0126346_1067451	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1549	Open in IMG/M
3300011120\|Ga0150983_13549253	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300011269\|Ga0137392_10250908	All Organisms → cellular organisms → Bacteria	1456	Open in IMG/M
3300011269\|Ga0137392_10601383	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	913	Open in IMG/M
3300011269\|Ga0137392_11564902	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300011270\|Ga0137391_11042648	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300011271\|Ga0137393_10600738	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	944	Open in IMG/M
3300012189\|Ga0137388_11431759	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300012189\|Ga0137388_11914572	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300012189\|Ga0137388_12042788	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300012200\|Ga0137382_10128156	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1702	Open in IMG/M
3300012202\|Ga0137363_10754987	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	824	Open in IMG/M
3300012202\|Ga0137363_10847414	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776	Open in IMG/M
3300012202\|Ga0137363_11627478	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300012203\|Ga0137399_10484502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1036	Open in IMG/M
3300012203\|Ga0137399_11419885	Not Available	580	Open in IMG/M
3300012203\|Ga0137399_11536566	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300012205\|Ga0137362_10675446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	888	Open in IMG/M
3300012207\|Ga0137381_10056266	All Organisms → cellular organisms → Bacteria → Acidobacteria	3260	Open in IMG/M
3300012210\|Ga0137378_10314560	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1456	Open in IMG/M
3300012351\|Ga0137386_11108907	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300012357\|Ga0137384_10107748	All Organisms → cellular organisms → Bacteria	2327	Open in IMG/M
3300012362\|Ga0137361_10520772	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1092	Open in IMG/M
3300012362\|Ga0137361_10926540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	789	Open in IMG/M
3300012363\|Ga0137390_10557107	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1117	Open in IMG/M
3300012582\|Ga0137358_10695547	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300012582\|Ga0137358_10862807	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300012685\|Ga0137397_10478263	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	928	Open in IMG/M
3300012685\|Ga0137397_10640798	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	790	Open in IMG/M
3300012685\|Ga0137397_11242550	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300012917\|Ga0137395_10073684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2210	Open in IMG/M
3300012918\|Ga0137396_11029425	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300012918\|Ga0137396_11059314	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300012918\|Ga0137396_11112733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300012923\|Ga0137359_11054812	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300012925\|Ga0137419_10963563	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300012925\|Ga0137419_11067595	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300012925\|Ga0137419_11131399	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300012927\|Ga0137416_10232665	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1497	Open in IMG/M
3300012927\|Ga0137416_11257931	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300012927\|Ga0137416_11705822	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300012929\|Ga0137404_10456229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1135	Open in IMG/M
3300012977\|Ga0134087_10434878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300015051\|Ga0137414_1146178	All Organisms → cellular organisms → Bacteria	1437	Open in IMG/M
3300015241\|Ga0137418_10301442	All Organisms → cellular organisms → Bacteria → Acidobacteria	1340	Open in IMG/M
3300016445\|Ga0182038_11063175	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300017656\|Ga0134112_10034059	All Organisms → cellular organisms → Bacteria	1804	Open in IMG/M
3300018034\|Ga0187863_10246955	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	992	Open in IMG/M
3300018468\|Ga0066662_10782021	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	923	Open in IMG/M
3300018468\|Ga0066662_11366752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
3300019890\|Ga0193728_1068657	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1689	Open in IMG/M
3300020579\|Ga0210407_10132017	All Organisms → cellular organisms → Bacteria	1915	Open in IMG/M
3300020580\|Ga0210403_11046599	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300020581\|Ga0210399_11358126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300020583\|Ga0210401_10997412	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300021046\|Ga0215015_10849475	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2712	Open in IMG/M
3300021086\|Ga0179596_10343808	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300021171\|Ga0210405_11164537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300021171\|Ga0210405_11220688	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300021374\|Ga0213881_10556330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300021401\|Ga0210393_10083583	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2531	Open in IMG/M
3300021407\|Ga0210383_10029498	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4585	Open in IMG/M
3300021420\|Ga0210394_10473659	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1102	Open in IMG/M
3300021432\|Ga0210384_11421604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300021479\|Ga0210410_10128886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2247	Open in IMG/M
3300021479\|Ga0210410_11648127	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300021559\|Ga0210409_11410370	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300022499\|Ga0242641_1041102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300022510\|Ga0242652_1037406	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300022531\|Ga0242660_1181750	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300022532\|Ga0242655_10250853	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300022557\|Ga0212123_10545782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300022724\|Ga0242665_10060713	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1032	Open in IMG/M
3300024179\|Ga0247695_1004009	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2122	Open in IMG/M
3300024331\|Ga0247668_1063809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300025912\|Ga0207707_11008439	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300025928\|Ga0207700_10385298	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1226	Open in IMG/M
3300025929\|Ga0207664_10674447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	929	Open in IMG/M
3300025939\|Ga0207665_10051199	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2779	Open in IMG/M
3300025996\|Ga0208777_1015274	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300026025\|Ga0208778_1020654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300026320\|Ga0209131_1158436	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1132	Open in IMG/M
3300026330\|Ga0209473_1199443	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	759	Open in IMG/M
3300026359\|Ga0257163_1027689	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300026377\|Ga0257171_1047261	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300026548\|Ga0209161_10440825	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300026869\|Ga0207821_1031687	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300027587\|Ga0209220_1033614	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1375	Open in IMG/M
3300027643\|Ga0209076_1025521	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1627	Open in IMG/M
3300027655\|Ga0209388_1107386	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	799	Open in IMG/M
3300027671\|Ga0209588_1241787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300027674\|Ga0209118_1076990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	957	Open in IMG/M
3300027857\|Ga0209166_10328829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	801	Open in IMG/M
3300027857\|Ga0209166_10355841	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	764	Open in IMG/M
3300027862\|Ga0209701_10564360	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300027867\|Ga0209167_10041038	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2250	Open in IMG/M
3300027903\|Ga0209488_10449102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	950	Open in IMG/M
3300028906\|Ga0308309_11589159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300030740\|Ga0265460_12518067	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300031128\|Ga0170823_10183390	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300031128\|Ga0170823_11773393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300031682\|Ga0318560_10610339	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300031715\|Ga0307476_11177434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300031820\|Ga0307473_10116667	All Organisms → cellular organisms → Bacteria	1456	Open in IMG/M
3300031820\|Ga0307473_10805526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300031942\|Ga0310916_10606830	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300031945\|Ga0310913_11110781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300031962\|Ga0307479_10354511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1450	Open in IMG/M
3300031962\|Ga0307479_10468640	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1243	Open in IMG/M
3300031962\|Ga0307479_11284027	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300032180\|Ga0307471_100568922	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1289	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.64%
Host-Associated	Host-Associated	1.36%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.24%
Aquatic	Environmental → Aquatic	3.40%
Plants	Host-Associated → Plants	1.36%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.56%
Freshwater	Environmental → Aquatic → Freshwater	1.36%
Sediment	Environmental → Aquatic → Sediment	1.36%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.68%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.91%
Loam	Environmental → Terrestrial → Soil → Loam	12.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.72%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.36%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.68%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.68%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	24.49%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.08%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.72%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.36%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.68%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.68%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.68%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.68%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	36.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.12%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.40%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	2.72%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.04%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.04%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.36%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.36%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.36%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.36%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.36%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.68%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.68%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.68%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.68%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.68%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.68%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001154	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1	Environmental	Open in IMG/M
3300001412	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300004135	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005873	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301	Environmental	Open in IMG/M
3300005888	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010865	Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022499	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022510	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024179	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025996	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301 (SPAdes)	Environmental	Open in IMG/M
3300026025	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103 (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026869	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 53 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12636J13339_10340751	3300001154	Forest Soil	TQWQGNVIRFYKDQSMLEIRGGAAPSSDLRKVAYDSSTHWTKQGKPGQQDEVKEGSFVILVGHVDDSGVLHATRIDLRRPR*
JGI20173J14856_10246911	3300001412	Arctic Peat Soil	LHGGPSPTVAAVTVAYDSSTEWTKQGKPGKQDEVKAGAFVIIVGTVDSKGVMHATRIDLRAAR*
JGI12712J15308_100632981	3300001471	Forest Soil	ETKWQGHVIRINKDLSQMDIRGGVNTRSEDMRKVAYDSSTEWTKGGKPGQMDEVKEGSFVIVLGQVDDNGVLHATRIDLRLPR*
JGI12627J18819_100657103	3300001867	Forest Soil	MSSEFTKTSSQMDIRGGVNTRAEDLRKIAYDSSTEWTNQGKPGEMDKVKEGSFVIVLGHMDDKGVLHATRIDLRLPR*
JGI12627J18819_100743041	3300001867	Forest Soil	PSAKKETKWQGHVVRIYKDLSQMDIRGGVNTRAEDLRKIAYDSSTEWTNQGKPGEMDKVKEGSFVIVVGHVDDKGVLHATRVDLRLPR*
JGIcombinedJ26739_1006484511	3300002245	Forest Soil	TKWQGHVIRINKDLSQMDIRGGVNTRSEDMRKVAYDSSTEWTKGGKPGQMDEVKEGSFVIVLGQVDDNGVLHATRIDLRLPR*
C688J35102_1184336461	3300002568	Soil	AQDAPAQKVSTKQAKWQGHVVRIDKEHSMMDIHGGSAPSNDARKVAYDSSTEWTKLGKPSQMDEVKEGSFVIMLGHVDKSGILHATRVDLRLPR*
JGI25613J43889_100785522	3300002907	Grasslands Soil	KKETKWQGSVVRIYKDLSQMDIRGGPAPATDTRKVAYDSSTEWTKHGKPGQQDEVKEGSFVIILGHLDDKGTLHASRIDLRLPR*
Ga0058884_14040651	3300004135	Forest Soil	KKETKWQGHVVRIYKDESQMDIRGGVNAQSEDLRKIAYDSSTAWTKLGKPGQQDEVKEGSFVIVLGHVDDKGTLHATRIDLRLPR*
Ga0062595_1004423911	3300004479	Soil	QGHVVRIDKEHSMIDLRGGPAPSKASRKVAYDTSTEWTKLGKPGQMDEVKEGSFVIILGHVDKKGVLQASRIDLRLPR*
Ga0062388_1021249752	3300004635	Bog Forest Soil	ATQDTSTAKKETKWQGTVIRIYKDLSQMDIRGGGTGSSSNLRKVAYDSSTQWTKGGKPGQQDEVKEGSFVIVLGQVDDKGVLHASRVDLRLPR*
Ga0066679_104797952	3300005176	Soil	WQGHVIRIYKDLSQMDIRGGVNTRAEDLRKIAYDSSTEWTKLGKPGEMDQVKEGSFVIVVGHVDDKGVLHATRIDLRLPR*
Ga0066679_105761221	3300005176	Soil	KEKKWQGHVIRIDKEHSMIDIRGGSAPSTDPRKVAYDTSTEWTKLGKPAQMDEVKEGSFVIILGHVDGKGILHATRVDLRLPR*
Ga0066678_103738221	3300005181	Soil	KKETKWQGHVVRINKDESQMDIRDAKTTMAGHLKKVAYDSSTEWTKLGKPGKQDDVKEESFVIVLGQVDDKGVLHAKRIDLRLPR*
Ga0066676_101979011	3300005186	Soil	EKKDAPAAQKETQWQGHVVRFYKDQSMMEIRGGSAPSNDLRKVAYDSSTQWTKQGKPGQQDEVKEGSFVILLGHVDDSGVLHATRIDLRLPR*
Ga0066687_101576191	3300005454	Soil	NQAPAEKKEAPATKKEAKWQGHVVRIYKDTSEMDIRGGAAPSSDLRKIAYDSSTEWTKGGKPGQQDEVKEGSFVIVLGHVDDKGTLHATRVDLRQPR*
Ga0070681_106275052	3300005458	Corn Rhizosphere	RIYKDQSQMDIRGGVNTRAEDLRKIAYDSSTQWTKLGKPGEQDEIKEGSFVIVLGQVDDKGVLHATRIDLRLPR*
Ga0070696_1006506841	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	KDLSQMDIRGDKAAQADHLRKVAYGSSTEWTKGGKPGQQDEVKEGSFVIVLGKVDDKGVLQASRIDLRLPR*
Ga0066692_106718602	3300005555	Soil	VTQEAAEKKDAPAAQKETQWQGHVVRFYKDQSMMEIRGGSAPSNDLRKVAYDSSTQWTKQGKPGQQDEVKEGSFVILLGHVDDSGVLHATRIDLRLPR*
Ga0066703_101622603	3300005568	Soil	GHVIRIDKDHSMIDLRGGSPPSNDQRKVAYDSSTEWTKLGKASQQDEVKEGSFVILLGHLDHKGVLHATRIDLRRPR*
Ga0066694_104567362	3300005574	Soil	MMDIHGGSAPSNDARKVAYDSSTEWTKLGKPSQMDEVKEGSFVIMLGHVDKSGILHATRVDLRLPR*
Ga0068866_100297681	3300005718	Miscanthus Rhizosphere	MDIRGGINSRAEDIRKVAYDSSTEWTKVGKPGKMDEVKEGSFVIVLGQVDDKGVLHATRIDLRLPR*
Ga0075287_10352472	3300005873	Rice Paddy Soil	MMDIHGGSAPSSDARKVAYDSSTEWTKLGKPSQMDEVKEGSFVIMLGHVDKSGILHATRVDLRLPR*
Ga0075289_10066932	3300005888	Rice Paddy Soil	RIDKEHSMMDIHGGSAPSSDARKVAYDSSTEWTKLGKPSQMDEVKEGSFVIMLGHVDKSGILHATRVDLRLPR*
Ga0070766_101667081	3300005921	Soil	APAAKKEIQWQGNVIRFYKDQSMLEIRGGLAPSSDLRKVAYDSSTHWTKQGKPGQQDEVKEGSFVILLGHVDDSGVLHATRIDLRRPR*
Ga0075029_1001885651	3300006052	Watersheds	QQAATEKKEAPAKKETKWQGHVVRINKDESTIDIHGGSAPSNDARKVAFDNSTEWTKLGKPAKMDEVKEGSFVILLGHVDDKGVLHATRIDLRLPR*
Ga0075018_100364441	3300006172	Watersheds	AGAQKKDAPAAAKETKWQGYVVRIDKDHSMIDLRGGPSPSKMMRKVAYDSSTQWTKLGKPGQQDEVKEGSFVIVVGQSDDSGVMHATRIDLRLPR*
Ga0075436_1013167201	3300006914	Populus Rhizosphere	PAPAAKKETKWQGNVIRINKDLSMMDIRGGVNTRAEDVRKVAYDSATEWTKLGKPGQMDQVKEGSFVIVLGHVDDKGVLHATRIDLRLPR*
Ga0099791_105793371	3300007255	Vadose Zone Soil	KKAPAAKKETKWQGHVVRIYKDLSQMDIKGGVNTRSDELRKIAYDSSTHWTKLGKPGEMDEVKEGSFVIVVGQVDDKGVLHANRIDLRLPR*
Ga0099794_104335211	3300007265	Vadose Zone Soil	KKAPAAKKEAKWQGHVVRIYKDLSQMDIRDAKTTTAEHLRKVAYDDSTEWTKLGKPGKQDEVKEESFVIVLGQVDDKGVLHAKRIDLRLPR*
Ga0099828_117198512	3300009089	Vadose Zone Soil	IRIYKDLSQMDIRGGGTGQSKDLRKVAYDSSTEWTKLGKPGQQDEVKEGSFVIVLGQVDDKGVLRATRIDLRLPR*
Ga0099792_103729551	3300009143	Vadose Zone Soil	GNVVRIYKDESQMDIRGTTPSGTVRKVAYDSSTQWTKGGKPGQQDEVKEGSFVIVLGTLDDKGVLHATRVDLRLPR*
Ga0099792_107102631	3300009143	Vadose Zone Soil	PAAKETKAQGNVVRIYKDESQMDIRGTTPSGTVRKVAYDSSTQWTKGGKPGQQDEVKEGSFVIVLGTLDDKGVLHATRVDLRLPR*
Ga0099792_112169581	3300009143	Vadose Zone Soil	KWQGHVVRIYKDLSQMDLRDAKTSTAEHLRKVSYDDSTEWTKLGKPGKQDEVKEGSFVIVLGHVDDKGVLHAKRIDLRLPR*
Ga0126380_100437612	3300010043	Tropical Forest Soil	GGAGANAQETRKIAYSASTQWTKANKPGGDLSEIKEGSFVIAVGQVDDKGVLQATRIDLRLPK*
Ga0126346_10674513	3300010865	Boreal Forest Soil	MLEIHGGPAPSTELRKVAYDSSTHWTKQGKPGQQDEVKEGSFVILLGHVDDSGVLHATRIDLRRPR*
Ga0150983_135492532	3300011120	Forest Soil	ASAANKETQWQGNVIRFYDDKSTLEIRGGIAPSSDLRKVAYDSSTQWTKQGKPGQQDEVKEGSFVILLGHVDDSGVLHATRIDLRRPR*
Ga0137392_102509082	3300011269	Vadose Zone Soil	HVIRIDKDHSMIDIRGGSAPSNDPRKVAYDSSTRWTKLGKPSQQDEVKDGAFVIMLGHLDHDGVLHATRIDLRRPR*
Ga0137392_106013831	3300011269	Vadose Zone Soil	KSMVEIRGGSAPSSDLRQVAYDSSTHWTKQGKPGKQDEVKEGSFVILLGHVDDSGVLHATRIDLRRPR*
Ga0137392_115649021	3300011269	Vadose Zone Soil	EAAEKKDAPAAQKETQWQGNVIRFYKDKSMLEIHGGAAPSSDLRKVAYDSSTQWTKQGKPGQQDEVKEGSFVILVGHVDDSGVLHATRIDLRRPR*
Ga0137391_110426481	3300011270	Vadose Zone Soil	VIRFNKDKSMVEIRGGSAPSSDLRQVAYDSSTHWTKQGKPGKQNEVKEGSFVILLGHVDDSGVLHATRIDLRRPR*
Ga0137393_106007381	3300011271	Vadose Zone Soil	KWQGHIIRIDKDHSMIDIRGGSAPSNDPRKVAYDSSTEWTKVGKPAEQDEFKEGSFVILLGHLDHKGVLRATRIDLRRPR*
Ga0137388_114317591	3300012189	Vadose Zone Soil	HVIRFNKDKSMVEIRGGSAPSSDLRQVAYDSSTHWTKQGKPGKQDEVKEGSFVILLGHVDDSGVLHATRIDLRRPR*
Ga0137388_119145721	3300012189	Vadose Zone Soil	TAAPKKQAKWQGTVVRIYKDVSQMDIRGGVNTRSEDLRKIAYDKATEWTKLGKPGEQDEVKEGSFVIVLGHVDDKGVLHATRIDLRLPR*
Ga0137388_120427882	3300012189	Vadose Zone Soil	VRIYKDLSQMDIRSNKSSESDALKKVAYDSSTNWTKLGKPGQMDEVKEGSFVIVVGQVDDKGVLHATRIDLRLPR*
Ga0137382_101281563	3300012200	Vadose Zone Soil	KKEATAVKKEKKWQGKVIRIYKDESMMDIQGGPAPSVQSRKVAYGNSTEWTKLGKPGQQDEVKEGSFVIVLGKVDDQGVLHATRIDLRLPR*
Ga0137363_107549871	3300012202	Vadose Zone Soil	KKATAAPKKQAKWQGTVVRIYKDVSQMDIRGGVNTRSEDLRKIAYDKATEWTKLGKPGEQDEVKEGSFVIVLGQVDDKGVLHATRIDLRLPR*
Ga0137363_108474141	3300012202	Vadose Zone Soil	QAAAEKKEAPAAKKETKWQGHVVRIYKDLSQMDISGGPAPSKAIRKVAYDNSTEWTKLGKPGQQDEVKEGSFVILLGQVDDKGVLHATRIDLRLPR*
Ga0137363_116274781	3300012202	Vadose Zone Soil	RFYKDKSMLEIHGGAAPSSDLRKVSYDSSTQWTKQGKPGQQDEVKEGSFVILVGHVDDSGVLHATRIDLRRPR*
Ga0137399_104845022	3300012203	Vadose Zone Soil	TKWQGHVIRIDKDHSMIDIRGGSAPSNDPRKVAYDSSTRWTKLGKPSQQDEVKDGAFVIMLGHLDHDGVLHATRIDLRRPR*
Ga0137399_114198851	3300012203	Vadose Zone Soil	VVRIYEDLSQIDLRGGPTPSKALRKFAYDNSTRWTKLGMPGQWDEVKEGSFVIILGQVDDKDVLHAMRIDLRLPR*
Ga0137399_115365661	3300012203	Vadose Zone Soil	KQAKWQGTVVRIYKDLSQMDIRGGAAPSKAMRKIAYDKATEWTKLGKPGEQDEVKEGSFVIVLGQVDDKGVLHATRIDLRLPR*
Ga0137362_106754461	3300012205	Vadose Zone Soil	AASETKAAPAAKETKAQGNVVRIYKDESQMDIRGTTPSGTVRKVAYDSSTQWTKGGKPGQQDEVKEGSFVIVLGTVDDKGVLHATRVDLRLPR*
Ga0137381_100562661	3300012207	Vadose Zone Soil	EAADEKKDAPAAQKETQWQGHVVRFYKDQSMMEIRGGSAPSNDLRKVSYDSSTQGTKQGKPGQQDEVKEGSFVILLGHVDDSGVLHATRIDLRLPR*
Ga0137378_103145601	3300012210	Vadose Zone Soil	GSAPSKDARKVAFDGSTEWTKLGKPSQQDAVTDGAFIIILGHVDDQGVMHATRIDLRLPR
Ga0137386_111089071	3300012351	Vadose Zone Soil	SKKETKWQGHVIRIDKDHSMIDLRGGSPPSNDQRKVAYDSSTEWTKLGKASQQDEVKEGSFVILLGHLDHKGVLHATRIDLRRPR*
Ga0137384_101077482	3300012357	Vadose Zone Soil	YKDESMMDIQGGPAPSVQSRKVAYGNSTEWTKLGKPGQQDEVKEGSFVIVLGKVDDKGVLHAARIDLRLPR*
Ga0137361_105207721	3300012362	Vadose Zone Soil	WQGHVIRIYKDLSQMDIRGGINTRSEDMRKIAYDGSTEWTKGGKPGQMDEVKEGSFVIVLGHVDDKGVLHATRIDLRLPR*
Ga0137361_109265401	3300012362	Vadose Zone Soil	GRQAASETKAASAAKETKAQGNVVRIYKDESQMDIRGTTPSGTVRKVAYDSSTQWTKGGKPGQQDEVKEGSFVIVLGTLDDKGVLHATRVDLRLPR*
Ga0137390_105571071	3300012363	Vadose Zone Soil	WQGHVVRIYKDLSQMDLRDAKTSTAEHLRKVAYDDSTEWTKLGKPGKQDEVKEGSFVIVLGHVDEKGVLHAKRVDLRLPR*
Ga0137358_106955473	3300012582	Vadose Zone Soil	HVVRINKDESTMDIRGGSAPSKELRKVAFDSSTEWTKLGKPAQQDEFKEASFVIVLGHVDDKGVLHARRIDLRLPR*
Ga0137358_108628071	3300012582	Vadose Zone Soil	TKAAPAAKETKAQGNVVRIYKDESQMDIRGTTPSGTVRKVAYDSSTQWTKGGKPGQQDEVKEGSFVIVLGTVDDKGVLHATRVDLRLPR*
Ga0137397_104782631	3300012685	Vadose Zone Soil	TKAAPAAKETKAQGNVVRIYKDESQMDIRGTTPSGTVRKVAYDNSTQWTKGGKPGQQDEVKEGSFVIVLGTVDDKGVLHATRVDLRLPR*
Ga0137397_106407981	3300012685	Vadose Zone Soil	TQEAAEKKDAPAAKKETKWQGHVVRLSKDQSTMEIRGGSAPSQDLRKVAYDSSTQWTKQGKPGQQDEVKEGSFVILLGHVDDSGVLHATRIDLRLPR*
Ga0137397_112425501	3300012685	Vadose Zone Soil	QAASETKAAPAAKETKAQGNVVRIYKDESQMDIRGTTPSGTVRKVAYDSSTQWTKGGKPGQQDEVKEGSFVIVLGTLDDKGVLHATRVDLRLPR*
Ga0137395_100736843	3300012917	Vadose Zone Soil	AQKETQWQGNVIRFYKDKSMLEIHGGAAPSSDLRKVAYDSSTQWTKQGKPGQQDEVKEGSFVILLGHVDDSGVLHATRIDLRRPR*
Ga0137396_110294251	3300012918	Vadose Zone Soil	VVRIYEDLSQIDLRGGPTPSKALRKFAYDNSTQWTKLGMPGQWDEVKEGSFVIILGQVDDKNVLHAMCIDLRLPR*
Ga0137396_110593141	3300012918	Vadose Zone Soil	YKDLSQMDIRDAKTTTAEHLKKVAYDDSTEWTKLGKPGKQDEVKEGSFVILLGQVDGDGVLHAKRIDLRLPR*
Ga0137396_111127332	3300012918	Vadose Zone Soil	GNVVRIYKDESQMDIRGTTPAGEMRKIAYDSSTQWTKVGKPGQQDEVKEGSFVIVLGKLDDKGVLHATRVDLRLPR*
Ga0137359_110548121	3300012923	Vadose Zone Soil	AAKKETKWQGHVVRIYKDESQMDIRGGVNTRSEDLRKIAYDSSTEWTKLGKPGQRDEVKEGSFVIVLGHVDDKGVLHAKRVDLRLPR*
Ga0137419_109635631	3300012925	Vadose Zone Soil	SQMDIRGTTPSGTVRKVAYDSSTQWTKGGKPGQQDEVKEGSFVIVLGTVDDKGVLHATRVDLRLPR*
Ga0137419_110675951	3300012925	Vadose Zone Soil	KAAPAAKKETKWQGHVVRIYNDESQMDIRGGVNTRSEDLRKIAYDSSTEWTKLGKPGQRDEVKEGSFVIVLGHVDDKGVLHAKRVDLRLPR*
Ga0137419_111313991	3300012925	Vadose Zone Soil	NKDKSMLEIRGGSAPSSDLRQVAYDSSTHWTKQGKPGKQDEVKEGSFVILLGHVDDSGVLHATRIDLRRPR*
Ga0137416_102326651	3300012927	Vadose Zone Soil	TSETKPAPAAKKETKWQGHVVRIYKDLSQMDIRGGVNTRAEDLRKIAYDSSTEWTKLGKPGEMDQVKEGSFVIVVGHVNDKGVLHATRIDLRLPR*
Ga0137416_112579311	3300012927	Vadose Zone Soil	KDHSMIDIRGGSAPSNDPRKVAYDSSTEWTKVGKPAEQDEFKEGSFVILLGHLDHKGVLRATRIDLRRPR*
Ga0137416_117058222	3300012927	Vadose Zone Soil	EDKKAPAAKKETKWQGHVVRIYKDLSQMDIKGGVNTRSDELRKIAYDSSTHWTKLGKPGEMDEVKEGSFVIVVGQVDDKGVLHANRIDLRLPR*
Ga0137404_104562291	3300012929	Vadose Zone Soil	ETKPAPAAKKETKWQGHVIRIYKDLSQMDIRGGVNSRAEDLRKIAYDSSTQWTKLGKPGEMDQVKEGSFVIVVGHVDDKGVLQATRIDLRLPR*
Ga0134087_104348781	3300012977	Grasslands Soil	QGKVIRIYKDESMMDIQGGPAPSVQSRKVAYGNSTEWTKLGKPGQQDEVKEGSFVIVLGKVDDKGVLHATRIDLRLPR*
Ga0137414_11461782	3300015051	Vadose Zone Soil	SQMDIRGTTPSGTVRKVAYDSSTQWTKGGKPGQQDEVKEGSFVIVLGTLDDKGVLHATRVDLRLPR*
Ga0137418_103014421	3300015241	Vadose Zone Soil	VVRTYEDLSQIDLRGGPTPSKALRKFAYDNSTQWTKLGMPGQWDEVKEGSFVIILGQVDDKNVLHAMCIDLRL
Ga0182038_110631751	3300016445	Soil	KKAAQKEAKWQGTVLRISKDQSTIDIRGGETPNATETRKIAYTSSTQWTKGNKPGGDLAEIKEGSFVIAVGQVDDKGVLQATRVDLRLPR
Ga0134112_100340591	3300017656	Grasslands Soil	DLSQMDISGGPAPSKAVRKVAYDNSTEWTKLGKPGQQDEVKEGSFVILLGEVDDKGVLHATRIDLRLPR
Ga0187863_102469551	3300018034	Peatland	SAMPGGAHYASAEQKAQTAAKETKWQGYVLKIDKEHSTMDIHGGSFPSNDVRKVAYDSSTAWTKLGKPAQQDEVKEGSFLILLGHVDDKGVLHATKIDLRLPR
Ga0066662_107820211	3300018468	Grasslands Soil	KEAKWQGHVVRVDTEHSMIDIRGGQAPSNDARKVAFDSSTEWTKLGKPAQMDEVKEGSFVIMLGQVDKSGVLHAKRIDLRLPR
Ga0066662_113667521	3300018468	Grasslands Soil	KKEAPAAKKETKWQGHVVRIYKDLSQMDIRGGPAPSKAVRKVAYDNSTEWTKLGKPGQQDEVKEGSFVILLGQVDDKGVLHATRIDLRLPR
Ga0193728_10686572	3300019890	Soil	KWQGHVVRIYKDLSQMDIRGGVNTRAEDLRKIAYDSSTEWTNLGKPGEMDQVKEGSFVIVVGHVDGKGVLHATRIDLRLPR
Ga0210407_101320171	3300020579	Soil	IYKDESQMDIRGGVTGQSEDLRKIAYDSSTAWTKLGKPGQQDEVKEGSFVIVLGHVDDKGTLHATRIDLRLPR
Ga0210403_110465991	3300020580	Soil	KETKWQGHVVRINKDESTMDIRGGSAPSKEPRKVAFDSSTKWTKLGKPAEQDEFKEASFVIVLGHVDDKGVLHATRIDLRLPR
Ga0210399_113581261	3300020581	Soil	AAGENKQAPATKKETKWQGSVIRISKDLSEMDIRGGVNAHSEDLRKIAFDSSTEWTKLGKPGKQDEVKEGSFVIVLGQVDDKGVLHATRIDLRLPR
Ga0210401_109974121	3300020583	Soil	GRQAAAETKAPAAKKATKWQGHVVRIYKDESQFDLRGGINSNSEDTRKVAWDSSTQWTKGGKPGQQDEVKEGSFVIVLGSVDGKGVLHATRVDLRQPR
Ga0215015_108494754	3300021046	Soil	TQASTKATKWQGHVIRFDKDHSMIDIRGGAPPSNDPRKVAYDSATAWTKLGKPSEQDEVKEGAFVIMLGHLDHKGVLHATRIDLRRPR
Ga0179596_103438082	3300021086	Vadose Zone Soil	KAQGNVVRIYKDESQMDIRGTTPSGTVRKVAYDSSTQWTKGGKPGQQDEVKEGSFVIVLGTVDDKGVLHATRVDLRLPR
Ga0210405_111645372	3300021171	Soil	VIRFDKDLSMIDIRGGAPPSNDPRKVAFDSSTEWTKLGKPSQQDEVKEGAFVILLGHLDGKGVLHATRIDLRRPR
Ga0210405_112206881	3300021171	Soil	KKETKWQGSVVRIYKDLSQMDIRGGVTAHSEDLRKISFDSSTEWTKLGKPGQQAEVKEGSFVIVLGQMDDKGVLHATRIDLRLPR
Ga0213881_105563302	3300021374	Exposed Rock	LHGGPAHSTEARKVAFDDKTRWTKLGKPSTQDEVKDGSFIIVLGHVDDQGILHATRIDLRLPR
Ga0210393_100835833	3300021401	Soil	MDIRGGMNARSDDLRKISFDSSTEWTKLGKPGQQDEVKEGSFVIVLGQMDDKGVLHATRIDLQLPK
Ga0210383_100294983	3300021407	Soil	AKKETKWQGTVVRIYKDLSQMDIRGGTTGSSNDLRKVAYDSSTQWTKGGKPGQQEEVKEGSFVIILGQVDDKGVLHASRVDLRLPR
Ga0210394_104736591	3300021420	Soil	QEASAAKKETKWQGNVVRIYKDLSQLHIRGGGTGSSNDLRKVAYDSSTQWTKDGKPGQQDEVKEGSFVIVLGQIDDQGVLHASRIDLRLPR
Ga0210384_114216042	3300021432	Soil	RISKDLSQMDIRGGVNGHSEDLRKIAFDSSTEWTKLGKPGKQDEVKEGSFVIVLGQVDDKGVLHATRIDLRLPR
Ga0210410_101288862	3300021479	Soil	QGNVVRIYKDESQMDIRGTTPAGEMRKIAYDSSTQWTKVGKPGQQDEVKEGSFVIVLGKLDDKGVLHATRVDLRLPR
Ga0210410_116481271	3300021479	Soil	APAAKKETQWQGNVIRFNKDQSMLEIHGGPAPSTELRKVAYDSSTHWTKQGKPGQQDEVKEGSFVILLGHVDDSGVLHATRIDLRRPR
Ga0210409_114103701	3300021559	Soil	QGHVVRINKDESTMDIRGGSAPSKEPRKVAFDSSTKWTKLGKPAEQDEFKEASFVIVLGHLDDKGVLHATRIDLRLPR
Ga0242641_10411021	3300022499	Soil	KETRWQGSVVRIYKDLSQIDIRGGVNAHSEDLRKLSFDSSTEWTKLGKPGQQDEVKEGSFVIVLGQMDDKGVLHATRIDLRLPK
Ga0242652_10374062	3300022510	Soil	MDIRGGVTGQSEDLRKIAYDSSTAWTKLGKPGQQDEVKEGSFVIVLGHVDDKGTLHATRIDLRLPR
Ga0242660_11817501	3300022531	Soil	IYKDESQMDIRGTTPAGEMRKIAYDSSTQWTKVGKPGQQDEVKEGSFVIVLGKLDDKGVLHATRVDLRLPR
Ga0242655_102508532	3300022532	Soil	MDIRGGVNAHSEDLRKISFDSSTEWTKLGKPGQQDEVKEGSFVIVLGHVDDKGVLRATRIDLRLPR
Ga0212123_105457821	3300022557	Iron-Sulfur Acid Spring	TKWQGSVLRIYKESSEMDLRGGAAPATDTRKVAYDSSTEWTKHGKPGQQDEVKEGSFVIVLGHLDDKGTLHASRIDLRLPR
Ga0242665_100607131	3300022724	Soil	KETKWQGHVVRIYKDESQMDIRGGVTGQSEDLRKIAYDSSTAWTKLGKPGQQDEVKEGSFVIVLGHVDDKGTLHATRIDLRLPR
Ga0247695_10040092	3300024179	Soil	ESKKEPAAKKETKWQGHVVRIYKDQSQMDIRGGVNTRAEDLRKIAYDSSTQWTKLGKPGEQDEIKEGSFVIVLGQVDDKGVLHATRIDLRLPR
Ga0247668_10638092	3300024331	Soil	TSETKPAPAAKKETKCQGHVVRIYKDLSQMDIRGGANAQAEDLRKIAYDSSTEWTKLGKPGEMDQVKEGSFVIVLGHTDGKGVLHATRIDLRLPR
Ga0207707_110084392	3300025912	Corn Rhizosphere	RIYKDQSQMDIRGGVNTRAEDLRKIAYDSSTQWTKLGKPGEQDEIKEGSFVIVLGQVDDKGVLHATRIDLRLPR
Ga0207700_103852982	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	GHVVRIDKEHSMIDLHGGPAPSKAARKVAYDTSTEWTKLGKPGQMDEVKEGSFVIILGHVDEKGVLQARRIDLRLPR
Ga0207664_106744472	3300025929	Agricultural Soil	ETKWQGHVVRIDKEHSMIDLHGGPAPSKAARKVAYDTSTEWTKLGKPGQMDEVKEGSFVIILGHVDEKGVLQARRIDLRLPR
Ga0207665_100511992	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	AKETKWQGHIVRINKDNSMIDIHGGAAPSDVARKVAYDSSTEWTKLGKPSKQDEVTNDAFIIILGNVDDKGVMHATRIDLRNPR
Ga0208777_10152742	3300025996	Rice Paddy Soil	MMDIHGGSAPSSDARKVAYDSSTEWTKLGKPSQMDEVKEGSFVIMLGHVDKSGILHATRVDLRLPR
Ga0208778_10206541	3300026025	Rice Paddy Soil	RIDKEHSMMDIHGGSAPSSDARKVAYDSSTEWTKLGKPSQMDEVKEGSFVIMLGHVDKSGILHATRVDLRLPR
Ga0209131_11584361	3300026320	Grasslands Soil	APAAKKETKWQGHVIRIYKDLSQMDIRGGVDTRAEDLRKIAYDSSTEWTKLGKPGEMDQVKEGSFVIVVGHIDGKGVLRATRIDLRLPR
Ga0209473_11994431	3300026330	Soil	KKEAPATKKEAKWQGHVVRIYKDTSEMDIRGGAAPSSDLRKIAYDSSTEWTKGGKPGQQDEVKEGSFVIVLGHVDDKGTLHATRVDLRRPR
Ga0257163_10276891	3300026359	Soil	RIYKDESQMDIRGTTPSGTVRKVAYDSSTQWTKGGKPGQQDEVKEGSFVIVLGTVDDKGVLHATRVDLRLPR
Ga0257171_10472612	3300026377	Soil	PAAKKETKWQGHVIRIYKDLSQMDIRGGVNTRAEDLRKIAYDSSTEWTKLGKPGEMDQVKEGSFVIVVGHVDDKGVLHATRIDLRLPR
Ga0209161_104408252	3300026548	Soil	YKDESMMDIQGGPAPSVQSRKVAYGNSTEWTKLGKPGQQDEVKEGSFVIVLGKVDDKGVLHATRIDLRLPR
Ga0209648_107098901	3300026551	Grasslands Soil	NKEESTIDIRGGLTNKDSDEKKISYDSSTRWTKLGKPAEQSEFKDGSFIIVLGQVDDKGVLHATRIDLRLPR
Ga0207821_10316872	3300026869	Tropical Forest Soil	TMDIRGGDTPNAADTRKIAFSSSTQWTKGNKPGGDLADIKEGSFVIAVGTVDDKGVLQATRIDLRLPR
Ga0209220_10336142	3300027587	Forest Soil	AKKETQWQGNVIRFNKDQSMLEIHGGPAPSTELRKVAYDSSTHWTKQGKPGQQDEVKEGSFVILLGHVDDSGVLHATRIDLRRPR
Ga0209076_10255212	3300027643	Vadose Zone Soil	GGSAPSSDLRQVAYDSSTHWTKQGKPGQQDDVKEGSFVILLGHVDDSGVLHATRIDLRRP
Ga0209388_11073861	3300027655	Vadose Zone Soil	KKAPAAKKETKWQGHVVRIYKDLSQMDIKGGVNTRSDELRKIAYDSSTHWTKLGKPGEMDEVKEGSFVIVVGQVDDKGVLHANRIDLRLPR
Ga0209588_12417871	3300027671	Vadose Zone Soil	VVRFYKDKSMMEIRGGSAPSNDLRTVAYDNSTQWTKQGKPGQQDEVKEGSFVILLGHVDDSGVLHATRIDLRRPR
Ga0209118_10769902	3300027674	Forest Soil	SAAKKQTKWQGHVVRIYKDLSQMDIRGGAAPSKDERKIAYDNSTAWTKLGKPGQQDEVKEGSFVIVLGHVDDKGVLHATRIDLRLPR
Ga0209166_103288291	3300027857	Surface Soil	KKAMKWQGSVVRINKDSSQLDIRGGINSDASDVRKISYDSSTEWTNLGKPGKMEDVKEGSFVIVLGQVDDKGVLHATRIDLRKPR
Ga0209166_103558412	3300027857	Surface Soil	PTRAQQAAAGEKDTQASAKETKWQGHVVRIDKERSLIDIHGGSAPSNDPRKVAYDSSTEWTKLGKPSQQDEVKEGSFVIMLGHLDDKGVLHATRIDLRLPR
Ga0209701_105643601	3300027862	Vadose Zone Soil	DLSQMDIRGGVTGESEDLRKVAYDSSTQWTKLGKPGQQDGVKEGSFVIVLGQVDDKGTLHATRIDLRLPR
Ga0209167_100410382	3300027867	Surface Soil	ALPARATQEASAAKKDAKWQGTVVRIYKDLSQMDIRGGTTGSSSNLKKVAYDSSTQWTKGGKPGQQDEVKEGSFVIVLGQVDDKGVLHASRIDLRLPR
Ga0209488_104491022	3300027903	Vadose Zone Soil	FNKDKSMLEIRGGSAPSSDLRQVAYDSSTHWTKQGKPGKQDEVKEGSFVILLGHVDDSGVLHATRIDLRRPR
Ga0308309_115891592	3300028906	Soil	RAVGENKQAPDTKKEMKWQGSVVRISKDLSQMDIRGGVNGHSEDLRKIAFDSSTEWTKLGKPGKQDEVKEGSFVIVLGQVDDKGVLHATRIDLRLPR
Ga0265460_125180671	3300030740	Soil	NKPAPATKKETKWQGSVIRIYKDLSLMDIRGGVNTRSEDLRKISFDSSTEWTKLGKPGQQDEVKEGSFVIVLGQMDDKGVLHATRIDLRLPR
Ga0170823_101833901	3300031128	Forest Soil	KWQGHVVRINKDLSQMDIRGGVNGRSEDERKIAYDSSTEWTNLGKPGKMEEVKEGSFVIVLGQVDGKGVLHATRIDLRKPH
Ga0170823_117733931	3300031128	Forest Soil	IYKDLSQMDIRGGVNTRAEDLRKIAYDSSTEWTKLGKPGEMDQVKEGSFVIVVGHIDDKGVLHATRIDLRLPR
Ga0318560_106103392	3300031682	Soil	LRMSKDQSTIDIRGGETPNATETRKIAYTSSTQWTKGNKPGGDLAEIKEGSFVIAVGQVDDKGVLQATRVDLRLPR
Ga0307476_111774341	3300031715	Hardwood Forest Soil	GHVVRINKDESQFDLRGGINSNSEDTRKVAFDSSTQWTKGGKPGQQDDVKEGSFVIVLGSVDGSGVLHATRVDLRQAR
Ga0307473_101166671	3300031820	Hardwood Forest Soil	YKDLSQIDLRSDKGAEADRLKKVAYDSSTEWTKQGKPGQQDEVKEGSFVIILGQVDDKGVLHATRIDLRLPR
Ga0307473_108055262	3300031820	Hardwood Forest Soil	KEKKWQGKVIRIYKDESMMDIQGGPAPSVQSRKVAYGNSTEWTKLGKPGQQDEVKEGSFVIVLGKVDDKGVLHATRIDLRLPR
Ga0310916_106068301	3300031942	Soil	ISKDQSTIDIRGGETPNATETRKIAYTSSTQWTKGNKPGGDLAEIKEGSFVIAVGQVDDKGVLQATRVDLRLPR
Ga0310913_111107812	3300031945	Soil	KDQSTIDIRGGETPNATETRKIAYTSSTQWTKGNKPGGDLAEIKEGSFVIAVGQVDDKGVLQATRVDLRLPR
Ga0307479_103545112	3300031962	Hardwood Forest Soil	TKWQGSVLRINKDSSQLDIRGGINSNASDTRTISYDNSTEWTNLGKPGKMEEVKEGSFVIVLGQVDDKGVLHASRIDLRKPR
Ga0307479_104686401	3300031962	Hardwood Forest Soil	KWQGHVVRIYKDESQMDIRGGVNTRSEDLRKIAYDSSTEWTKLGKPGQKDEVKEGSFVIVLGHVDDKGTLHATRIDLRLPR
Ga0307479_112840271	3300031962	Hardwood Forest Soil	LRIDKDQSMMDIRGGQNPSNDQRKVAFDSSTEWTKLGKPAQHDEFKEASFVIVLGHVDDKGVLHATRIDLRRPR
Ga0307471_1005689221	3300032180	Hardwood Forest Soil	QAAGEKKATRWQGHVVRIYKDLSQIDLRSDKGAEADRLKKVAYDNSTEWTKQGKPGQQDEVKEGSFVIILGQVDDKGVLHATRIDLRLPR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049198

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences