NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F049738

Metagenome / Metatranscriptome Family F049738

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F049738
Family Type Metagenome / Metatranscriptome
Number of Sequences 146
Average Sequence Length 74 residues
Representative Sequence MTSRRTRVMSKLRVGDLVIRRHRLLKTQGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEAVDDLELLEGTNGA
Number of Associated Samples 110
Number of Associated Scaffolds 146

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 47.26 %
% of genes near scaffold ends (potentially truncated) 28.77 %
% of genes from short scaffolds (< 2000 bps) 76.71 %
Associated GOLD sequencing projects 100
AlphaFold2 3D model prediction Yes
3D model pTM-score0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (93.836 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(21.233 % of family members)
Environment Ontology (ENVO) Unclassified
(23.973 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(50.000 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 2.91%    β-sheet: 27.18%    Coil/Unstructured: 69.90%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.61
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 146 Family Scaffolds
PF01165Ribosomal_S21 32.19
PF00487FA_desaturase 13.01
PF00076RRM_1 8.22
PF00072Response_reg 2.74
PF02771Acyl-CoA_dh_N 2.74
PF01717Meth_synt_2 2.05
PF08281Sigma70_r4_2 1.37
PF01694Rhomboid 1.37
PF09601DUF2459 1.37
PF13406SLT_2 1.37
PF02321OEP 1.37
PF02518HATPase_c 1.37
PF05494MlaC 1.37
PF00106adh_short 0.68
PF13091PLDc_2 0.68
PF00196GerE 0.68
PF08028Acyl-CoA_dh_2 0.68
PF02775TPP_enzyme_C 0.68
PF01019G_glu_transpept 0.68
PF135322OG-FeII_Oxy_2 0.68
PF00011HSP20 0.68
PF13501SoxY 0.68
PF14384BrnA_antitoxin 0.68
PF02954HTH_8 0.68
PF00528BPD_transp_1 0.68
PF05726Pirin_C 0.68
PF00296Bac_luciferase 0.68
PF01547SBP_bac_1 0.68
PF12007DUF3501 0.68
PF13683rve_3 0.68
PF07638Sigma70_ECF 0.68
PF07883Cupin_2 0.68
PF03109ABC1 0.68

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 146 Family Scaffolds
COG0828Ribosomal protein S21Translation, ribosomal structure and biogenesis [J] 32.19
COG1398Fatty-acid desaturaseLipid transport and metabolism [I] 13.01
COG3239Fatty acid desaturaseLipid transport and metabolism [I] 13.01
COG1960Acyl-CoA dehydrogenase related to the alkylation response protein AidBLipid transport and metabolism [I] 3.42
COG1538Outer membrane protein TolCCell wall/membrane/envelope biogenesis [M] 2.74
COG0620Methionine synthase II (cobalamin-independent)Amino acid transport and metabolism [E] 2.05
COG0705Membrane-associated serine protease, rhomboid familyPosttranslational modification, protein turnover, chaperones [O] 1.37
COG2854Periplasmic subunit MlaC of the ABC-type intermembrane phospholipid transporter MlaCell wall/membrane/envelope biogenesis [M] 1.37
COG0071Small heat shock protein IbpA, HSP20 familyPosttranslational modification, protein turnover, chaperones [O] 0.68
COG0405Gamma-glutamyltranspeptidaseAmino acid transport and metabolism [E] 0.68
COG0661Predicted protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB familySignal transduction mechanisms [T] 0.68
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 0.68
COG1741Redox-sensitive bicupin YhaK, pirin superfamilyGeneral function prediction only [R] 0.68
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.68


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms93.84 %
UnclassifiedrootN/A6.16 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_100317427Not Available585Open in IMG/M
3300003319|soilL2_10226270All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1202Open in IMG/M
3300004156|Ga0062589_100005154All Organisms → cellular organisms → Bacteria → Proteobacteria4729Open in IMG/M
3300004157|Ga0062590_102644369All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria534Open in IMG/M
3300004157|Ga0062590_102673461All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria531Open in IMG/M
3300004267|Ga0066396_10092064All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium549Open in IMG/M
3300004463|Ga0063356_102487243All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium793Open in IMG/M
3300005166|Ga0066674_10036720All Organisms → cellular organisms → Bacteria2181Open in IMG/M
3300005175|Ga0066673_10141880All Organisms → cellular organisms → Bacteria1330Open in IMG/M
3300005180|Ga0066685_10265971Not Available1184Open in IMG/M
3300005332|Ga0066388_100001662All Organisms → cellular organisms → Bacteria12773Open in IMG/M
3300005332|Ga0066388_101569471All Organisms → cellular organisms → Bacteria1156Open in IMG/M
3300005353|Ga0070669_100589654All Organisms → cellular organisms → Bacteria930Open in IMG/M
3300005440|Ga0070705_100995374Not Available680Open in IMG/M
3300005440|Ga0070705_101801328All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300005445|Ga0070708_100071487All Organisms → cellular organisms → Bacteria → Proteobacteria3124Open in IMG/M
3300005445|Ga0070708_101292891All Organisms → cellular organisms → Bacteria681Open in IMG/M
3300005445|Ga0070708_101323793All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300005450|Ga0066682_10858013All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium544Open in IMG/M
3300005467|Ga0070706_100110953All Organisms → cellular organisms → Bacteria → Proteobacteria2553Open in IMG/M
3300005467|Ga0070706_100300136All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1499Open in IMG/M
3300005518|Ga0070699_101111930All Organisms → cellular organisms → Bacteria → Proteobacteria725Open in IMG/M
3300005536|Ga0070697_100120309All Organisms → cellular organisms → Bacteria → Proteobacteria2196Open in IMG/M
3300005536|Ga0070697_101256185All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium660Open in IMG/M
3300005540|Ga0066697_10381736All Organisms → cellular organisms → Bacteria819Open in IMG/M
3300005549|Ga0070704_100008043All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria6301Open in IMG/M
3300005552|Ga0066701_10010291All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria4235Open in IMG/M
3300005553|Ga0066695_10583031All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium674Open in IMG/M
3300005556|Ga0066707_10288767All Organisms → cellular organisms → Bacteria1073Open in IMG/M
3300005559|Ga0066700_10138932All Organisms → cellular organisms → Bacteria → Proteobacteria1634Open in IMG/M
3300005574|Ga0066694_10483196All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium578Open in IMG/M
3300005576|Ga0066708_10476419All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium803Open in IMG/M
3300005617|Ga0068859_100709805All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RIFCSPHIGHO2_02_FULL_73_261096Open in IMG/M
3300005618|Ga0068864_100478275All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RIFCSPHIGHO2_02_FULL_73_261195Open in IMG/M
3300005719|Ga0068861_102313808All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300005764|Ga0066903_102356361All Organisms → cellular organisms → Bacteria1029Open in IMG/M
3300005764|Ga0066903_104113412All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium779Open in IMG/M
3300005842|Ga0068858_102371340All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300006046|Ga0066652_100484290All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1146Open in IMG/M
3300006046|Ga0066652_100619419All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1023Open in IMG/M
3300006049|Ga0075417_10011350All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria3319Open in IMG/M
3300006049|Ga0075417_10188398All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria973Open in IMG/M
3300006196|Ga0075422_10487045All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium558Open in IMG/M
3300006794|Ga0066658_10774015All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300006796|Ga0066665_10802208All Organisms → cellular organisms → Bacteria742Open in IMG/M
3300006804|Ga0079221_10847595Not Available662Open in IMG/M
3300006844|Ga0075428_100069262All Organisms → cellular organisms → Bacteria3858Open in IMG/M
3300006846|Ga0075430_100262316All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1431Open in IMG/M
3300006852|Ga0075433_10247462All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1582Open in IMG/M
3300006852|Ga0075433_10323967All Organisms → cellular organisms → Bacteria1363Open in IMG/M
3300006852|Ga0075433_10941060All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria753Open in IMG/M
3300006854|Ga0075425_100025205All Organisms → cellular organisms → Bacteria6554Open in IMG/M
3300006854|Ga0075425_101243004All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria845Open in IMG/M
3300006854|Ga0075425_101403210Not Available790Open in IMG/M
3300006871|Ga0075434_100755801All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium989Open in IMG/M
3300006871|Ga0075434_100871065All Organisms → cellular organisms → Bacteria916Open in IMG/M
3300006880|Ga0075429_100026599All Organisms → cellular organisms → Bacteria5025Open in IMG/M
3300006903|Ga0075426_10148435All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1691Open in IMG/M
3300006903|Ga0075426_10647981All Organisms → cellular organisms → Bacteria790Open in IMG/M
3300006904|Ga0075424_100019169All Organisms → cellular organisms → Bacteria → Proteobacteria6979Open in IMG/M
3300006904|Ga0075424_100044677All Organisms → cellular organisms → Bacteria4619Open in IMG/M
3300006904|Ga0075424_101405577All Organisms → cellular organisms → Bacteria → Proteobacteria741Open in IMG/M
3300006904|Ga0075424_102481220All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium543Open in IMG/M
3300009012|Ga0066710_100041555All Organisms → cellular organisms → Bacteria → Proteobacteria5555Open in IMG/M
3300009012|Ga0066710_100587484All Organisms → cellular organisms → Bacteria1688Open in IMG/M
3300009038|Ga0099829_11046971All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria677Open in IMG/M
3300009053|Ga0105095_10698440All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium566Open in IMG/M
3300009089|Ga0099828_10951617All Organisms → cellular organisms → Bacteria766Open in IMG/M
3300009090|Ga0099827_10107998All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2223Open in IMG/M
3300009090|Ga0099827_10710578All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium869Open in IMG/M
3300009094|Ga0111539_10020179All Organisms → cellular organisms → Bacteria8212Open in IMG/M
3300009137|Ga0066709_100742673All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1416Open in IMG/M
3300009137|Ga0066709_102808298All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300009147|Ga0114129_10091767All Organisms → cellular organisms → Bacteria → Proteobacteria4207Open in IMG/M
3300009147|Ga0114129_10802533All Organisms → cellular organisms → Bacteria1200Open in IMG/M
3300009147|Ga0114129_11528188All Organisms → cellular organisms → Bacteria819Open in IMG/M
3300009147|Ga0114129_13211392All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria531Open in IMG/M
3300009156|Ga0111538_10074217All Organisms → cellular organisms → Bacteria4329Open in IMG/M
3300009691|Ga0114944_1158107All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium892Open in IMG/M
3300009777|Ga0105164_10114861All Organisms → cellular organisms → Bacteria1396Open in IMG/M
3300010043|Ga0126380_10217405All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1294Open in IMG/M
3300010043|Ga0126380_12202297All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium509Open in IMG/M
3300010304|Ga0134088_10393935All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium675Open in IMG/M
3300010329|Ga0134111_10053507All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1470Open in IMG/M
3300010329|Ga0134111_10419260All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300010359|Ga0126376_10023295All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium4082Open in IMG/M
3300010362|Ga0126377_12481485All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium594Open in IMG/M
3300010399|Ga0134127_10417939All Organisms → cellular organisms → Bacteria → Proteobacteria1331Open in IMG/M
3300010399|Ga0134127_13213059Not Available534Open in IMG/M
3300010403|Ga0134123_13310093All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium520Open in IMG/M
3300011270|Ga0137391_10728934All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium822Open in IMG/M
3300012040|Ga0137461_1018407All Organisms → cellular organisms → Bacteria1732Open in IMG/M
3300012189|Ga0137388_10265513All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1566Open in IMG/M
3300012189|Ga0137388_10493827All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_151137Open in IMG/M
3300012285|Ga0137370_10117034All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1516Open in IMG/M
3300012285|Ga0137370_10469855All Organisms → cellular organisms → Bacteria768Open in IMG/M
3300012350|Ga0137372_10126372All Organisms → cellular organisms → Bacteria2113Open in IMG/M
3300012363|Ga0137390_11278168All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300012944|Ga0137410_10384181Not Available1129Open in IMG/M
3300014166|Ga0134079_10093149All Organisms → cellular organisms → Bacteria1138Open in IMG/M
3300015252|Ga0180075_1095811All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium528Open in IMG/M
3300015358|Ga0134089_10541992All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium514Open in IMG/M
3300015371|Ga0132258_10048134All Organisms → cellular organisms → Bacteria9734Open in IMG/M
3300015371|Ga0132258_10063529All Organisms → cellular organisms → Bacteria8523Open in IMG/M
3300015373|Ga0132257_100261750All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria2068Open in IMG/M
3300015374|Ga0132255_105391493All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium541Open in IMG/M
3300018056|Ga0184623_10295565All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria733Open in IMG/M
3300018422|Ga0190265_11449586All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium801Open in IMG/M
3300018433|Ga0066667_10009699All Organisms → cellular organisms → Bacteria → Proteobacteria4553Open in IMG/M
3300018482|Ga0066669_10044487All Organisms → cellular organisms → Bacteria2754Open in IMG/M
3300018482|Ga0066669_10058669All Organisms → cellular organisms → Bacteria2478Open in IMG/M
3300018482|Ga0066669_10292087All Organisms → cellular organisms → Bacteria1317Open in IMG/M
3300019244|Ga0180111_1178307All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria571Open in IMG/M
3300019883|Ga0193725_1000246All Organisms → cellular organisms → Bacteria17072Open in IMG/M
3300020067|Ga0180109_1214592All Organisms → cellular organisms → Bacteria715Open in IMG/M
3300020074|Ga0194113_10414324All Organisms → cellular organisms → Bacteria987Open in IMG/M
3300020083|Ga0194111_10013788All Organisms → cellular organisms → Bacteria8415Open in IMG/M
3300020084|Ga0194110_10131303All Organisms → cellular organisms → Bacteria2004Open in IMG/M
3300022563|Ga0212128_10042227All Organisms → cellular organisms → Bacteria2942Open in IMG/M
3300025908|Ga0207643_10725441All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria643Open in IMG/M
3300025910|Ga0207684_10237009All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1574Open in IMG/M
3300025910|Ga0207684_10768330All Organisms → cellular organisms → Bacteria → Proteobacteria816Open in IMG/M
3300025910|Ga0207684_10869162All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium759Open in IMG/M
3300025923|Ga0207681_10178041All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1617Open in IMG/M
3300025930|Ga0207701_10235076All Organisms → cellular organisms → Bacteria1602Open in IMG/M
3300026118|Ga0207675_101562915Not Available680Open in IMG/M
3300026524|Ga0209690_1027421All Organisms → cellular organisms → Bacteria2780Open in IMG/M
3300026530|Ga0209807_1118111All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1096Open in IMG/M
3300026536|Ga0209058_1029017All Organisms → cellular organisms → Bacteria3446Open in IMG/M
3300026548|Ga0209161_10090076All Organisms → cellular organisms → Bacteria1874Open in IMG/M
3300027731|Ga0209592_1267958All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium589Open in IMG/M
3300027819|Ga0209514_10098622All Organisms → cellular organisms → Bacteria → Proteobacteria1727Open in IMG/M
3300027873|Ga0209814_10098921All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1237Open in IMG/M
3300027873|Ga0209814_10176358All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium920Open in IMG/M
3300027880|Ga0209481_10559807All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium592Open in IMG/M
3300027882|Ga0209590_10222735All Organisms → cellular organisms → Bacteria → Proteobacteria1198Open in IMG/M
3300027907|Ga0207428_10379926Not Available1036Open in IMG/M
3300027909|Ga0209382_11774800All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium602Open in IMG/M
(restricted) 3300031197|Ga0255310_10102617All Organisms → cellular organisms → Bacteria → Proteobacteria769Open in IMG/M
3300031720|Ga0307469_12398158All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium515Open in IMG/M
3300031740|Ga0307468_100569837All Organisms → cellular organisms → Bacteria → Proteobacteria917Open in IMG/M
3300031820|Ga0307473_10761726All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium686Open in IMG/M
3300031911|Ga0307412_11938307All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium544Open in IMG/M
3300031995|Ga0307409_100451125All Organisms → cellular organisms → Bacteria → Proteobacteria1241Open in IMG/M
3300032163|Ga0315281_10215645All Organisms → cellular organisms → Bacteria2133Open in IMG/M
3300032421|Ga0310812_10038054All Organisms → cellular organisms → Bacteria → Proteobacteria1800Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere21.23%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil13.01%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere9.59%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.90%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.48%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.42%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.42%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.42%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.74%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.74%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake2.05%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.05%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.05%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.05%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.05%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.37%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.37%
Thermal SpringsEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs1.37%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.37%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.37%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.37%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.68%
WastewaterEnvironmental → Aquatic → Freshwater → Drinking Water → Unchlorinated → Wastewater0.68%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater0.68%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.68%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.68%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.68%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.68%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.68%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.68%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.68%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300003319Sugarcane bulk soil Sample L2EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004267Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBioEnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006196Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1Host-AssociatedOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009053Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009691Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2EnvironmentalOpen in IMG/M
3300009777Wastewater microbial communities from Netherlands to study Microbial Dark Matter (Phase II) - VDW unchlorinated drinking waterEnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012040Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2EnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300015252Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT399_16_10DEnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019244Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT293_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019883Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2EnvironmentalOpen in IMG/M
3300020067Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT47_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020074Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200mEnvironmentalOpen in IMG/M
3300020083Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015033 Kigoma Deep Cast 300mEnvironmentalOpen in IMG/M
3300020084Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015032 Kigoma Deep Cast 1200mEnvironmentalOpen in IMG/M
3300022563OV2_combined assemblyEnvironmentalOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026524Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)EnvironmentalOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300027731Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027819Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300031197 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031911Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1Host-AssociatedOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300032163Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0EnvironmentalOpen in IMG/M
3300032421Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10031742723300000364SoilMPARHVLPPLKPGDLVIRRHRLLKTTGTVVRFDGKDENGASRAWVKWSHATTLPNPSLETVDELELIVGAPPGDA*
soilL2_1022627013300003319Sugarcane Root And Bulk SoilMTTFRRVRLMPRLKPGDVVIRRHRLLKTPGTVVRYDGEDENGATRAWIHWDHPTTLPNPSLETLDEVELLQGDSRVIPSRRD*
Ga0062589_10000515463300004156SoilMPARRAMPPLKPGDHVIRRHRLLKTQGTVVRFAGRDENGAPRAWIKWSHPTTLPNPSIEALDELELIEATGPEPA*
Ga0062590_10264436923300004157SoilHLRPRFKPGDGVVRRHRLLKTRGTVLRLDTDADTGGSLAWVKWDHPTTLPNPSREPLDDLELVDVSSPA*
Ga0062590_10267346123300004157SoilMSRRPNIAGKLHVGDVVVRRHRLLKTQGTVLRFDGEDENGGSRAWIKWNHPNTLPNPSLEAV
Ga0066396_1009206423300004267Tropical Forest SoilTLRRVRVMSRLKPGDVVVRRHRLLKTHGTILRFDGEDENGALRAWIHWDHPTTLPNPSLETLDDVKLVDQDARLSRP*
Ga0063356_10248724313300004463Arabidopsis Thaliana RhizosphereMPRRPLLMSRFKPGDLVIRRHRLLKTQGTILRFDGEDMHGASRAWVRWNHASTLPNPSLETV
Ga0066674_1003672013300005166SoilMARRVNVILRPKQGDVVIRRHRLLKTQGTVLRFDGEDENGASRVWVRWRHSTTLPNPSLEPVNDLEVVPSASS*
Ga0066673_1014188013300005175SoilMTSRRTRVINKLHVGDPVIRRHRLLKTRGTVLRFDGEDEHGASRAWVKWTHPDTLPNPSLEAVDDLELLEGSESES*
Ga0066685_1026597133300005180SoilMFRRADVLPRLKPGDQVIRRHRLLKTQGTVLRFDRVDANRASHVWVRWSHPTTLPNPSLERVDELELVDGSGLAD*
Ga0066388_100001662103300005332Tropical Forest SoilMSRLKPGDVVVRRHRLLKTHGTILRFDGEDENGALRAWIHWDHPTTLPNPSLETLDDVKLVDPDARLSRP*
Ga0066388_10156947123300005332Tropical Forest SoilMPRRPFVLGRLRPGDLVIRRHRLLKTQGTVLRFAGADHNGAARAWIKWNHPDTLPNPSLEIVDELELVDGQA*
Ga0070669_10058965423300005353Switchgrass RhizosphereVTFRRAVVNVRLKVGDLVIRRHRLIKTQGTILRFDGEDENGASRVWVKWDHPTTLPNPSRESVDALESVDPAPSP*
Ga0070705_10099537423300005440Corn, Switchgrass And Miscanthus RhizosphereSARRPLLREKLSIGDRVIRRHRLLKTQGTVLRFDGEDENGSSRAWVRWSHPNTLPNRSLETVDDLEQLGVDPVV*
Ga0070705_10180132823300005440Corn, Switchgrass And Miscanthus RhizosphereFRRPRVMPKLKPGDVVIRRHRLLKTRGTVLRFDGEDENGASRAWIQWDHPTTLPNPSLETLDDVELVQRDGGPPEP*
Ga0070708_10007148753300005445Corn, Switchgrass And Miscanthus RhizosphereMPKLKPGDVVIRRHRLLKTQGTVVRYDGEDGNGASRAWIRWDHPTTLPNPSLETLDDVELVEGDVRVTRS*
Ga0070708_10129289133300005445Corn, Switchgrass And Miscanthus RhizosphereVTTFRRVRVMPKLKPGDVVVRRHRLLKTHGTVLRFDGEDENGASRAWIQWDHPTTLPNPSLETLDDVELVEEDTPQNRP*
Ga0070708_10132379333300005445Corn, Switchgrass And Miscanthus RhizosphereMTSRRTRVMTKLRVGDLVIRRHRLLKTQGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEAVDDLELREGTNGAG*
Ga0066682_1085801313300005450SoilVMSKLRVGDLVIRRHRLLKTQGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEAVDDLELLEGTNGAG*
Ga0070706_10011095343300005467Corn, Switchgrass And Miscanthus RhizosphereVTTFRRFRTMPKLRPGDVVVRRHRLLKTRGAVLRFDGEDENGASRAWIRWDHPTTLPNPSLETLDDLELVAGDGHLSLP*
Ga0070706_10030013633300005467Corn, Switchgrass And Miscanthus RhizospherePGHGVTTARRARLMPKLKPGDVVIRRHRLLKTQGTVVRYDGEDGNGASRAWIRWDHPTTLPNPSLETLDDVELVEGDVRVTRS*
Ga0070699_10111193023300005518Corn, Switchgrass And Miscanthus RhizosphereVTTFRRPRVMPKLKPGDVVIRRHRLLKTRGTVLRFDGEDENGASRAWIQWDHPTTLPNPSLETLDDVELVQRDGGPPEP*
Ga0070697_10012030913300005536Corn, Switchgrass And Miscanthus RhizosphereVTTARRARLMPKLKPGDVVIRRHRLLKTQGTVVRYDGEDGNGASRAWIRWDHPTTLPNPSLETLDDVELVEGDVRVTRS*
Ga0070697_10125618533300005536Corn, Switchgrass And Miscanthus RhizosphereKLKPGDIVVRRHRLLKTHGTVLRFDGEDENGASRAWIQWDHPTTLPNPSLETLDDVELVEEDTPQNRP*
Ga0066697_1038173613300005540SoilMRRPLVVTRFRPGDLVIRRHRLLKTQGTVLRFDGTDENGTVRAWVKWNHANTLPNPSLEAVDELE
Ga0070704_10000804343300005549Corn, Switchgrass And Miscanthus RhizosphereVTSRRPLVVAKVQAGDIVVRRHRLLKTQGTVLRFDGEDENGASCVWVKWQHPTTLPNPSRETVDDLVRVENGERPV*
Ga0066701_1001029113300005552SoilMARRVNVILRPKQGDVVIRRHRLLKTQGTVLRFDGEDENGASRVWVRWRHSTTLPNPSLEPVNDLEV
Ga0066695_1058303133300005553SoilMTSRRTRVMSKLRVGDLVIRRHRLLKTQGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEAVDDLELLEGTNGAG*
Ga0066707_1028876723300005556SoilMRRALVVKRFRPGDLVIRRHRLLKTQGTVLRFDGTDENGTSRAWVRWNHADTLPNPSLEAVDELELVNGDPTS*
Ga0066700_1013893223300005559SoilMTSRRTRVMSKLRVGDLVIRRHRLLKTQGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEAVDDLELLERTNGAG*
Ga0066694_1048319623300005574SoilMTSRRTRVMSKLRVGDLVIRRHRLLKTQGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEAVDDLELLEGTNGA
Ga0066708_1047641923300005576SoilRGMTSRRTRVINKLHVGDPVIRRHRLLKTRGTVLRFDGEDEHGASRAWVKWTHPDTLPNPSLEAVDDLELLEGSESES*
Ga0068859_10070980513300005617Switchgrass RhizosphereMSRRPNIAGKLHVGDVVVRRHRLLKTQGTVLRFDGEDENGGSRAWIKWKHPNTLPNPSLEAVDDLEIVAE*
Ga0068864_10047827513300005618Switchgrass RhizosphereMSRRPNIAGKLHVGDVVVRRHRLLKTQGTVLRFDGEDENGGSRAWIKWNHPNTLPNPSLEAVDDLEIVAE*
Ga0068861_10231380823300005719Switchgrass RhizosphereLASAVTLMSRRPNIAGKLHVGDVVVRRHRLLKTQGTVLRFDGEDENGGSRAWIKWNHPNTLPNPSLEAVDDLEIVAE*
Ga0066903_10235636123300005764Tropical Forest SoilTDVPARRVMRRLKPGDLVIRRHRLLKTRGTVVRFDGEDENGASRAWIKWSHPTTLPNPSLETVDELALVEESDGSVEA*
Ga0066903_10411341223300005764Tropical Forest SoilMSRLKPGDVVVRRHRLLKTHGTILRFDGEDENGALRAWIHWDHPTTLSNPSLETLDDVKLVDQDARLSRP*
Ga0068858_10237134013300005842Switchgrass RhizosphereAPRGDERRRPLAPLEALAIDLASAVTLMSRRPNIAGKLHVGDVVVRRHRLLKTQGTVLRFDGEDENGGSRAWIKWNHPNTLPNPSLEAVDDLEIVAE*
Ga0066652_10048429023300006046SoilMTSRRTRVINKLHVGDPVIRRHRLLKTRGTVLRFDGEDEHGASRAWVKWTHPDTLPNPRLEAVDDLELLEGSESES*
Ga0066652_10061941913300006046SoilAGPRVGQRMTSRRTRVMTKLRVGDLVIRRHRLLKTQGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEAVDDLELLEGTNGAG*
Ga0075417_1001135043300006049Populus RhizosphereMRRLKPGDRVIRRHRLLKTQGTVVRFDGEDENGASRAWIKWSHPTTLPNPSLETVDELELMVEGDGTLEA*
Ga0075417_1018839823300006049Populus RhizosphereMPARHVMLPLKPGDLVVRRHRLLKTRGTLVRFDGKDENGASRAWVKWSHATTLPNPSLETVDELELIVGAGPREA*
Ga0075422_1048704523300006196Populus RhizosphereLMPARRAMPPLKPGDHVIRRHRLLKTQGTVVRFAGRDENGAPRAWIKWSHPTTLPNPSIEALDELELIEATGPEPA*
Ga0066658_1077401523300006794SoilVTMFRRVRMIPKLKPGDVVVRRHRLLKTHGIVLRFDGEDSNGASRAWIKWDHPTTLPNPSLETLDDVELVEADTRLKTL*
Ga0066665_1080220813300006796SoilMFRRADVLPRLKPGDQVIRRHRLLKTQGTVLRFDRVDANRASHVWVRWSHPTTLPNPSLERVDELKLVDGSGLAD*
Ga0079221_1084759523300006804Agricultural SoilMPARHVMLPLKPGDLVVRRHRLLKTRGTLVRFDGKDENGASRAWVKWSHATTLPNPSLETVDELELIVGAGPGEA*
Ga0075428_10006926283300006844Populus RhizosphereMPTRRVMSPLKPGDLVIRSHRLLKTRGTVVRLDGKDENGASRAWIRWSHPTTLPNPSLEAVIELELVERTSLGEA*
Ga0075430_10026231613300006846Populus RhizosphereMPTRRVMSPLKPGDLVIRSHRLLKTRGTVVRLDGKDENGASRAWIRWSHPTTLPNPSLEAVIELELV
Ga0075433_1024746233300006852Populus RhizosphereMAARRAMPPIKPGDQVVRRHRLLKTTGTVVRFAGRDENGAARAWIKWTHPTTLPNPSLETVDELELAESDGSETATT*
Ga0075433_1032396723300006852Populus RhizosphereMTSRRTRVMTKLRVGDLVIRRHRLLKTQGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEAVDDLELLEGTNGTG*
Ga0075433_1094106013300006852Populus RhizosphereVTTFRRVRVMPKLKPGDVVVRRHRLLKTHGTVLRFDGEDENGASRAWIQWDHPTTLPNPSLETLD
Ga0075425_10002520573300006854Populus RhizosphereMPKLKPGDVVIRRHRLLKTRGTVVRYDGEDGNGASRAWIHWDHPTTLPNPSLETLDDVELVESDVRVTRS*
Ga0075425_10124300433300006854Populus RhizosphereMPARHVMLPLKPGDLVVRRHRLLKTRGTLVRFDGKDENGASRAWVKWSHATTLPNPSLETVDELELIV
Ga0075425_10140321023300006854Populus RhizosphereMTSRRTRVMTKLRVGDLVIRRHRLLKTQGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEAVDDLELLEGTNGAG*
Ga0075434_10075580133300006871Populus RhizosphereVTTVRRVRLMPKLKPGDVVIRRHRLLKTRGTVVRYDGEDGNGASRAWIHWDHPTTLPNPSLETLDDVELVESDVRVTRS*
Ga0075434_10087106523300006871Populus RhizosphereMTNRRTQVIARLRIGDTVVRRHRLLKTQGTVLRFDGEDDNGASRAWIRWSHPNTLPNPSLEPVDDLELVQAASPGA*
Ga0075429_10002659943300006880Populus RhizosphereMPTRRVMSPLKPGDLVIRSHRLLKTRGTVVRLDGKDENGASRAWIRWSHPTTLPNPSLEAVIELELVERTSLAEA*
Ga0075426_1014843533300006903Populus RhizosphereMSRRALVMSRVRRGDLVIRRHRLLKTQGIVLRFDGEDENGASRAWIKWSHPTTLPNPSLEPVDDLEILEAGGWSETG*
Ga0075426_1064798133300006903Populus RhizosphereMPKLKPGDVVIRRHRLLKTRGIVVRYDGEDGNGASRAWIHWDHPTTLPNPSLETLDDVELVESD
Ga0075424_10001916913300006904Populus RhizosphereMAARRAMPPIKPGDQVVRRHRLLKTTGTVVRFAGRDENGAARAWIKWTHPTTLPNPSLETVDEL
Ga0075424_10004467793300006904Populus RhizosphereVTTVRRVRLMPKLKPGDVVIRRHRLLKTRGTVVRYDGEDDNGASRAWIRWDHPTTLPNPSLETLDDVELVEGDGP*
Ga0075424_10140557723300006904Populus RhizosphereMTNRRTQVIARLRIGDTVVRRHRLLKTQGTVLRFDGEDDNGASRAWIRWSHPNTLPNPSLEPVDDLELVQAAGPGA*
Ga0075424_10248122023300006904Populus RhizosphereGGAQEAPPRARPCPRPGHGVTTFRRVRVMPKLKPGDVVVRRHRLLKTHGTVLRFDGEDENGASRAWIQWDHPTTLPNPSLETLDDVELVEEDTPQNRP*
Ga0066710_10004155523300009012Grasslands SoilMFRRADVLPRLKPGDQVIRRHRLLKTQGTVLRFDRVDANRASHVWVRWSHPTTLPNPSLERVDELELVDGGGLAD
Ga0066710_10058748413300009012Grasslands SoilMTSRRTRVMSKLRVGDLVIRRHRLLKTLGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEAVDDLELLEGTNGAG
Ga0099829_1104697113300009038Vadose Zone SoilMTSRRTRVMTKLRVGDLVIRRHRLLKTQGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEAVDDLELLEGTNGVD*
Ga0105095_1069844023300009053Freshwater SedimentMSRRPNVTTKLQVGDVVVRRHRLLKTQGTVLRFDGEDDNGGSRAWIRWNHKDTLPNPSLEAVDDLEVVGASGAV*
Ga0099828_1095161733300009089Vadose Zone SoilMIPKLKPGDIVVRRHRLLKTHGIVLRFDGEDSNGASRAWIKWDHPTMLPNPSLETLDDVELVEA
Ga0099827_1010799823300009090Vadose Zone SoilMMPKLKPGDVVVRRHRLLKTHGTVLRFDGEDENGASRAWIQWDHPTTLPNPSLETLDDVELVEGDIPLDRP*
Ga0099827_1071057843300009090Vadose Zone SoilVTTFRRVRMMPKLKPGDIVVRRHRLLKTHGTVLRFDGEDENGASRAWIQWDHPTTLPNPSLETLDDVELVEEDTPQNRP*
Ga0111539_10020179103300009094Populus RhizosphereMSARRAMPPIKPGDQVVRRHRLLKTTGTVVRFAGRDENGATRAWIKWTHPTTLPNPSLETVDELELAESDGSETTTT*
Ga0066709_10074267323300009137Grasslands SoilMTKLRVGDLVIRRHRLLKTQGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEAVDDLELLEGTNGAG*
Ga0066709_10280829813300009137Grasslands SoilMRRPLVVTRFRPGDLVIRRHRLLKTQGTVLRFDGTDENGTVRAWVKWNHANTLPNPSLEAVDELELVGGDSAR*
Ga0114129_1009176723300009147Populus RhizosphereMLPLKPGDLVVRRHRLLKTRGTLVRFDGKDENGASRAWVKWSHATTLPNPSLETVDELELIVGAGPGEA*
Ga0114129_1080253323300009147Populus RhizosphereMSERRLRVNVKLRVGDPVVRRHRLLKTPGVVLRFDGEDENGASRVWIKWSHPNTLPNPSLETVDDLERLD*
Ga0114129_1152818813300009147Populus RhizosphereMTSRRTRVMTKLRVGDLVIRRHRLLKTQGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEPVDDLELLDGERAE
Ga0114129_1321139213300009147Populus RhizosphereMSSRRTQVIARLRVGDIVIRRHRLLKTQGTVLRFDGEDDNGASRAWIRWSHPSTLPNPSLEPVDDLELIQAANGGA*
Ga0111538_1007421783300009156Populus RhizosphereMAARRAMPPIKPGDQVVRRHRLLKTTGTVVRFAGRDENGAARAWIKWTHPTTLPNPSLETVDELELAESDGSETTTT*
Ga0114944_115810723300009691Thermal SpringsMSTRRPLVVGRLRVGDVVVRRHRLLKTQGTVLHFDGEDENGASRAWIRWSHPNTLPNPSLEVVDDLERVGPA*
Ga0105164_1011486123300009777WastewaterMSRLHVGDLIVRRHRLLKTQGTVLRFDGEDENGASRVWVKWSHPDTLPNPSLEAVDDLELVDGTNGANGANGAA*
Ga0126380_1021740513300010043Tropical Forest SoilMRRLKPGDRVIRRRRLLKTRGTVVRFDAKDGNGASRAWIKWSHPTTLPNPSLETVDELELMEEGGREVESDVDGIAVEGPAT*
Ga0126380_1220229713300010043Tropical Forest SoilMRRLKPGDLVIRRHRLLKTRGTVVRFDGEDENGASRAWIKWSHPTTLPNPSLETVDELALVEESDGSVEA*
Ga0134088_1039393533300010304Grasslands SoilMFRRADVLPRLKPGDQVIRRHRLLKTQGTVLRFDGVDANRASRVWVRWSHPTTLPNPSLERVDELELVDGSGLAD*
Ga0134111_1005350743300010329Grasslands SoilMARRVNVILRPKQGDVVIRRHRILKTQGTVLRFDGEDENGASRVWVRWRHSTTLPNPSLEPVNDLEVVRAAS
Ga0134111_1041926013300010329Grasslands SoilRMTSRRTRVMSKLRVGDLVIRRHRLLKTQGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEAVDDLELLEGTNGAG*
Ga0126376_1002329543300010359Tropical Forest SoilMSRLKPGDVVVRRHRLLKTHGTILRFDGEDENGALRAWIHWDHPTTLPNPSLETLDDVKLVDQDARLSRP*
Ga0126377_1248148533300010362Tropical Forest SoilVTTFRRVRLMPRLKPGDVVIRSHRLLKTRGTVVRYDGEDENGGTRAWIRWDHPTTLPNPSLETLD
Ga0134127_1041793943300010399Terrestrial SoilMPKLKPGDVVIRRHRLLKTRGTVLRFDGEDENGASRAWIQWDHPTTLPNPSLETLDDVELVQRDGGPPEP*
Ga0134127_1321305923300010399Terrestrial SoilAPLEALAIDLASAVTLMSRRPNIAGKLHVGDVVVRRHRLLKTQGTVLRFDGEDENGGSRAWIKWNHPNTLPNPSLEAVDDLEIVAE*
Ga0134123_1331009323300010403Terrestrial SoilMTRRPNIAGKLHVGDVVVRRHRLLKTQGTVLRFDGEDENGGSRAWIKWNHPNTLPNPSLEAVDDLEIVAE*
Ga0137391_1072893423300011270Vadose Zone SoilMIPKLKPGDIVVRRHRLLKTHGIVLRFDGEDSNGASRAWIKWDHPTTLPNPSLETLDDVELVEADTRLKTL*
Ga0137461_101840723300012040SoilMSRLHVGDLIVRRHRLLKTQGTVLRFDGEDENGASRVWVKWSHPDTLPNPSLEAVDDLELVEGTNGAHGVNGAA*
Ga0137388_1026551343300012189Vadose Zone SoilMMPKLKPGDVVVRRHRLLKTHGTVLRFDGEDENGASRAWIQWDHPTTLPNPSLETLDDVELVEEDTPQNRP*
Ga0137388_1049382723300012189Vadose Zone SoilMTFRRPNVISKLHPGDVVVRRHRLLKTQGTVVRFDGEDENGGSRAWIKWSHPNTLPNPSLEAVDDLELVTGVDSPR*
Ga0137370_1011703443300012285Vadose Zone SoilMFRLKAGDVVIRRHRLLKTQGTILRFDGEDENGASRAWVKWRHSTTLPNPSLEPVDDLEMLTPDGEMSVP*
Ga0137370_1046985533300012285Vadose Zone SoilMTSRRTRVINKLHVGDPVIRRHRLLKTRGTVLRFDGEDEHGASRAWVKWTHPDTLPNPSL
Ga0137372_1012637223300012350Vadose Zone SoilMTFRRPNVISKLRPGDLVVRRHRLLKTQGTVLRFDGEDENGGSRAWIKWSHPNTLPNPSLEAVDDLELVTGAESGR*
Ga0137390_1127816833300012363Vadose Zone SoilMMPKLKPGDVVVRRHRLLKTHGTVLRFDGEDENGASRAWIQWDHPTTLPNPSLETLDDVELVEGDIPLDR
Ga0137410_1038418133300012944Vadose Zone SoilMSKLRVGDLVIRRHRLLKTQGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEAVDDLELLEGTNGAG*
Ga0134079_1009314933300014166Grasslands SoilINKLHVGDPVIRRHRLLKTRGTVLRFDGEDEHGASRAWVKWTHPDTLPNPSLEAVDDLELLEGSESES*
Ga0180075_109581123300015252SoilMSFRRPHVIGKLHVGDLVVRRHRLLKTQGTVVRFDGEDENGGSRAWIKWSHPNTLPNPSLEAVDDLERVGGDAG*
Ga0134089_1054199223300015358Grasslands SoilMARRVNVILRPKQGDVVIRRHRLLKTQGTVLRFDGEDENGASRVWVRWRHSTTLPNPSLEPVNDLEVIPSASS*
Ga0132258_1004813443300015371Arabidopsis RhizosphereMLPLKPGDLVVRRHRLLKTRGTLVRFDGKDENGASRAWVKWSHATTLPNPSLETVDELELIVDAGPGEA*
Ga0132258_1006352993300015371Arabidopsis RhizosphereMMPPLKPGDLVIRRHRLLKTRGTLIRFDGKDENGASRAWVKWNHATTLPNPSLEAVHDLELIVGVGFGEA*
Ga0132257_10026175013300015373Arabidopsis RhizosphereRAPGTGTDMPARHVMLPLKPGDLVVRRHRLLKTRGTLVRFDGKDENGASRAWVKWSHATTLPNPSLETVDELELIVDAGPGEA*
Ga0132255_10539149323300015374Arabidopsis RhizosphereMGTGIDLPARHMMPPLKPGDLVIRRHRLLKTRGTLIRFDGKDENGASRAWVKWNHATTLPNPSLEAVHDLELIVGVGFGEA*
Ga0184623_1029556513300018056Groundwater SedimentMTSRRTRVVSKLRVGDPVIRRHRLLKTQGVVLRFDGEDENGASRAWVKWSHPNTLPNPSLEAVDDLELLEGTNGAA
Ga0190265_1144958623300018422SoilMSRRPFVVSRVQPGHRVVRRHRLLKTQGTVLRFDGEDENGASRVWVKWNHPTTLPNPSLEAVDDLELISE
Ga0066667_1000969963300018433Grasslands SoilMARRVNVILRPKQGDVVIRRHRLLKTQGTVLRFDGEDENGASRVWVRWRHSTTLPNPSLEPVNDLEVVPSASS
Ga0066669_1004448713300018482Grasslands SoilMARRVNVILRPKQGDVVIRRHRLLKTQGTVLRFDGEDENGASRVWVRWRHSTTLPNPSLEPVNDL
Ga0066669_1005866933300018482Grasslands SoilMTSRRTRVINKLHVGDPVIRRHRLLKTRGTVLRFDGEDEHGASRAWVKWTHPDTLPNPSLEAVDDLELLEGSESES
Ga0066669_1029208743300018482Grasslands SoilMTSRRTRVMSKLRVGDLVIRRHRLLKTQGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEAVDDLELLEGTNGAG
Ga0180111_117830723300019244Groundwater SedimentMSFRRPHVIGKLHVGDLVVRRHRLLKTQGTVVPFDGEDENGGSRAWIRWSHPNTLPNPSLEAVDDLERVEAEAG
Ga0193725_1000246143300019883SoilVTTFRRVRVMPKLKPGDIVVRRHRLLKTQGTVLRFDGEDENGASCAWVRWNHPTTLPNPSRETLADLELVEDNAFA
Ga0180109_121459223300020067Groundwater SedimentMPRRPLVASKLRIGDLVVRRHRLLKTQGTVVRFDGEDENGASRAWIKWQHPNTLPNPSLEAVDDLELVPGLTRGV
Ga0194113_1041432423300020074Freshwater LakeLTERRVRVMSRLQVGDLVVRRHRLLKTQGVLLRFDGEDENGASCAWIKWNHPNTLPNPSREAVDDLERATPP
Ga0194111_1001378813300020083Freshwater LakeLTERRVRVMSRLQVGDLVVRRHRLLKTQGVLLRFDGEDENGASCAWIKWNHPNTLPNPSREAVD
Ga0194110_1013130343300020084Freshwater LakeMSRLQVGDLVVRRHRLLKTQGVLLRFDGEDENGASCAWIKWNHPNTLPNPSREAVDDLERATPP
Ga0212128_1004222733300022563Thermal SpringsMSTRRPLVVGRLRVGDIVVRRHRLLKTQGTVLHFDGEDENGASRAWIRWSHPNTLPNPSLEVVDDLERVGPA
Ga0207643_1072544113300025908Miscanthus RhizosphereMSRRPNIAGKLHVGDVVVRRHRLLKTQGTVLRFDGEDENGGSRAWIKWNHPNTLPNPSLEAVDDLEIVAE
Ga0207684_1023700933300025910Corn, Switchgrass And Miscanthus RhizosphereVTTFRRFRTMPKLRPGDVVVRRHRLLKTRGAVLRFDGEDENGASRAWIRWDHPTTLPNPSLETLDDLELVAGDGHLSLP
Ga0207684_1076833013300025910Corn, Switchgrass And Miscanthus RhizosphereVTTFRRVRVMPKLKPGDVVVRRHRLLKTHGTVLRFDGEDENGASRAWIQWDHPTTLPNPSLETLDDVELVEEDTPQNRP
Ga0207684_1086916223300025910Corn, Switchgrass And Miscanthus RhizospherePGHGVTTARRARLMPKLKPGDVVIRRHRLLKTQGTVVRYDGEDGNGASRAWIRWDHPTTLPNPSLETLDDVELVEGDVRVTRS
Ga0207681_1017804153300025923Switchgrass RhizosphereMPARRAMPPLKPGDHVIRRHRLLKTQGTVVRFAGRDENGAPRAWIKWSHPTTLPNPSIEALDELELIEATGPEPA
Ga0207701_1023507633300025930Corn, Switchgrass And Miscanthus RhizosphereVTFRRAVVNVRLKVGDLVIRRHRLIKTQGTILRFDGEDENGASRVWVKWDHPTTLPNPSRESVDALESVDPAPSP
Ga0207675_10156291523300026118Switchgrass RhizosphereIDLAFAVTLMSRRPNIAGKLHVGDVVVRRHRLLKTQGTVLRFDGEDENGGSRAWIKWNHPNTLPNPSLEAVDDLEIVAE
Ga0209690_102742113300026524SoilMARRVNVILRPKQGDVVIRRHRLLKTQGTVLRFDGEDENGASRVWVRWRHSTTLPNPSLEPVNDLEVIPSASS
Ga0209807_111811133300026530SoilMTSRRTRVMTKLRVGDLVIRRHRLLKTQGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEAVDDLELLEGTNGAG
Ga0209058_102901733300026536SoilMMARRVNVILRPKQGDVVIRRHRLLKTQGTVLRFDGEDENGASRVWVRWRHSTTLPNPSLEPVNDLEVVPSASS
Ga0209161_1009007643300026548SoilMTSRRTRVMSKLRVGDLVIRRHRLLKTQGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEAVDDERGGPARPRVTRTHA
Ga0209592_126795823300027731Freshwater SedimentMSRRPNVTTKLQVGDVVVRRHRLLKTQGTVLRFDGEDDNGGSRAWIRWNHKDTLPNPSLEAVDDLEVVGASGAV
Ga0209514_1009862223300027819GroundwaterMPRRPLVINRLGVGDLVVRRHRLLKTQGTVVRFDGDTGTCSARVWIKWSHPTTLPNPSLEYADDLERVGEADSARVG
Ga0209814_1009892123300027873Populus RhizosphereMRRLKPGDRVIRRHRLLKTQGTVVRFDGEDENGASRAWIKWSHPTTLPNPSLETVDELELMVEGDGTLEA
Ga0209814_1017635813300027873Populus RhizosphereMPTRRVMSPLKPGDLVIRSHRLLKTRGTVVRLDGKDENGASRAWIRWSHPTTLPNPSLEAVIELELVERTSLGEA
Ga0209481_1055980733300027880Populus RhizosphereMAARRAMPPIKPGDQVVRRHRLLKTTGTVVRFAGRDENGAARAWIKWTHPTTLPNPSLETVDELELA
Ga0209590_1022273533300027882Vadose Zone SoilVTTFRRVRMMPKLKPGDVVVRRHRLLKTHGTVLRFDGEDENGASRAWIQWDHPTTLPNPSLETLDDVELVEGDIPLDRP
Ga0207428_1037992613300027907Populus RhizosphereMPARHVMLPLKPGDLVVRRHRLLKTRGTLVRFDGKDENGASRAWVKWSHATTLPNPSLETVDE
Ga0209382_1177480013300027909Populus RhizosphereVTFRRARVIPRLKPGDRVIRRHRLLKTQGTVLRFDGEDENGASRAWVRWLHPSTLPNPSLEPVDDLELVEEIA
(restricted) Ga0255310_1010261733300031197Sandy SoilVKTSRRVRVNPRLKPGDVVVRRHRLLKTRGTVLRFDGEDDDGASRAWIRWDHPTTLPNPSLETIDDVELVESVEGLARPES
Ga0307469_1239815823300031720Hardwood Forest SoilVTTFRRVRVMPKLKPGDVVVRRHRLLKTHGTVLRFDGEDENGASRAWIQWDHPTTLPNPSLETLDDVELVEEDTPQIRP
Ga0307468_10056983733300031740Hardwood Forest SoilVTTFRRVRVMPKLKPGDIVVRRHRLLKTHGTVLRFDGEDENGASCVWVRWDHPTTLPNPSREPLADLELVEDTALA
Ga0307473_1076172613300031820Hardwood Forest SoilVTTARRARLMPKLKPGDVVIRRHRLLKTQGTVVRYDGEDGNGASRAWIRWDHPTTLPNPSLETLDDVELVEGDVRVTRS
Ga0307412_1193830723300031911RhizosphereMPRRTPQISRFKPGDLVVRRHRLLRTQGTLLRFDGEDMNGASRAWVKWNHATTLPNPSLEAVDDLELVERTSAN
Ga0307409_10045112533300031995RhizosphereISRFKPGDLVVRRHRLLRTQGTLLRFDGEDMNGASRAWVKWNHATTLPNPSLEAVDDLELVERTSAN
Ga0315281_1021564553300032163SedimentMPRRPRVMSRLHVGDLIVRRHRLLKTQGTVLRFDGEDENGASRVWVKWSHPDTLPNPSLEAVDDLELVESTNGANGVNGAA
Ga0310812_1003805413300032421SoilMPARYMMPPLKPGDLVIRRHRLLKTRGTVIRFDGKDENGASRAWVKWNHATTLPNPSLEAVHDLELIVGAGFGEA


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