Basic Information | |
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Family ID | F049738 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 146 |
Average Sequence Length | 74 residues |
Representative Sequence | MTSRRTRVMSKLRVGDLVIRRHRLLKTQGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEAVDDLELLEGTNGA |
Number of Associated Samples | 110 |
Number of Associated Scaffolds | 146 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 47.26 % |
% of genes near scaffold ends (potentially truncated) | 28.77 % |
% of genes from short scaffolds (< 2000 bps) | 76.71 % |
Associated GOLD sequencing projects | 100 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.61 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (93.836 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (21.233 % of family members) |
Environment Ontology (ENVO) | Unclassified (23.973 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (50.000 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 2.91% β-sheet: 27.18% Coil/Unstructured: 69.90% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.61 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 146 Family Scaffolds |
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PF01165 | Ribosomal_S21 | 32.19 |
PF00487 | FA_desaturase | 13.01 |
PF00076 | RRM_1 | 8.22 |
PF00072 | Response_reg | 2.74 |
PF02771 | Acyl-CoA_dh_N | 2.74 |
PF01717 | Meth_synt_2 | 2.05 |
PF08281 | Sigma70_r4_2 | 1.37 |
PF01694 | Rhomboid | 1.37 |
PF09601 | DUF2459 | 1.37 |
PF13406 | SLT_2 | 1.37 |
PF02321 | OEP | 1.37 |
PF02518 | HATPase_c | 1.37 |
PF05494 | MlaC | 1.37 |
PF00106 | adh_short | 0.68 |
PF13091 | PLDc_2 | 0.68 |
PF00196 | GerE | 0.68 |
PF08028 | Acyl-CoA_dh_2 | 0.68 |
PF02775 | TPP_enzyme_C | 0.68 |
PF01019 | G_glu_transpept | 0.68 |
PF13532 | 2OG-FeII_Oxy_2 | 0.68 |
PF00011 | HSP20 | 0.68 |
PF13501 | SoxY | 0.68 |
PF14384 | BrnA_antitoxin | 0.68 |
PF02954 | HTH_8 | 0.68 |
PF00528 | BPD_transp_1 | 0.68 |
PF05726 | Pirin_C | 0.68 |
PF00296 | Bac_luciferase | 0.68 |
PF01547 | SBP_bac_1 | 0.68 |
PF12007 | DUF3501 | 0.68 |
PF13683 | rve_3 | 0.68 |
PF07638 | Sigma70_ECF | 0.68 |
PF07883 | Cupin_2 | 0.68 |
PF03109 | ABC1 | 0.68 |
COG ID | Name | Functional Category | % Frequency in 146 Family Scaffolds |
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COG0828 | Ribosomal protein S21 | Translation, ribosomal structure and biogenesis [J] | 32.19 |
COG1398 | Fatty-acid desaturase | Lipid transport and metabolism [I] | 13.01 |
COG3239 | Fatty acid desaturase | Lipid transport and metabolism [I] | 13.01 |
COG1960 | Acyl-CoA dehydrogenase related to the alkylation response protein AidB | Lipid transport and metabolism [I] | 3.42 |
COG1538 | Outer membrane protein TolC | Cell wall/membrane/envelope biogenesis [M] | 2.74 |
COG0620 | Methionine synthase II (cobalamin-independent) | Amino acid transport and metabolism [E] | 2.05 |
COG0705 | Membrane-associated serine protease, rhomboid family | Posttranslational modification, protein turnover, chaperones [O] | 1.37 |
COG2854 | Periplasmic subunit MlaC of the ABC-type intermembrane phospholipid transporter Mla | Cell wall/membrane/envelope biogenesis [M] | 1.37 |
COG0071 | Small heat shock protein IbpA, HSP20 family | Posttranslational modification, protein turnover, chaperones [O] | 0.68 |
COG0405 | Gamma-glutamyltranspeptidase | Amino acid transport and metabolism [E] | 0.68 |
COG0661 | Predicted protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family | Signal transduction mechanisms [T] | 0.68 |
COG1595 | DNA-directed RNA polymerase specialized sigma subunit, sigma24 family | Transcription [K] | 0.68 |
COG1741 | Redox-sensitive bicupin YhaK, pirin superfamily | General function prediction only [R] | 0.68 |
COG2141 | Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase) | Coenzyme transport and metabolism [H] | 0.68 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 93.84 % |
Unclassified | root | N/A | 6.16 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300000364|INPhiseqgaiiFebDRAFT_100317427 | Not Available | 585 | Open in IMG/M |
3300003319|soilL2_10226270 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1202 | Open in IMG/M |
3300004156|Ga0062589_100005154 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 4729 | Open in IMG/M |
3300004157|Ga0062590_102644369 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 534 | Open in IMG/M |
3300004157|Ga0062590_102673461 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 531 | Open in IMG/M |
3300004267|Ga0066396_10092064 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 549 | Open in IMG/M |
3300004463|Ga0063356_102487243 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 793 | Open in IMG/M |
3300005166|Ga0066674_10036720 | All Organisms → cellular organisms → Bacteria | 2181 | Open in IMG/M |
3300005175|Ga0066673_10141880 | All Organisms → cellular organisms → Bacteria | 1330 | Open in IMG/M |
3300005180|Ga0066685_10265971 | Not Available | 1184 | Open in IMG/M |
3300005332|Ga0066388_100001662 | All Organisms → cellular organisms → Bacteria | 12773 | Open in IMG/M |
3300005332|Ga0066388_101569471 | All Organisms → cellular organisms → Bacteria | 1156 | Open in IMG/M |
3300005353|Ga0070669_100589654 | All Organisms → cellular organisms → Bacteria | 930 | Open in IMG/M |
3300005440|Ga0070705_100995374 | Not Available | 680 | Open in IMG/M |
3300005440|Ga0070705_101801328 | All Organisms → cellular organisms → Bacteria | 519 | Open in IMG/M |
3300005445|Ga0070708_100071487 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 3124 | Open in IMG/M |
3300005445|Ga0070708_101292891 | All Organisms → cellular organisms → Bacteria | 681 | Open in IMG/M |
3300005445|Ga0070708_101323793 | All Organisms → cellular organisms → Bacteria | 673 | Open in IMG/M |
3300005450|Ga0066682_10858013 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 544 | Open in IMG/M |
3300005467|Ga0070706_100110953 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2553 | Open in IMG/M |
3300005467|Ga0070706_100300136 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1499 | Open in IMG/M |
3300005518|Ga0070699_101111930 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 725 | Open in IMG/M |
3300005536|Ga0070697_100120309 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2196 | Open in IMG/M |
3300005536|Ga0070697_101256185 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 660 | Open in IMG/M |
3300005540|Ga0066697_10381736 | All Organisms → cellular organisms → Bacteria | 819 | Open in IMG/M |
3300005549|Ga0070704_100008043 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 6301 | Open in IMG/M |
3300005552|Ga0066701_10010291 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 4235 | Open in IMG/M |
3300005553|Ga0066695_10583031 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 674 | Open in IMG/M |
3300005556|Ga0066707_10288767 | All Organisms → cellular organisms → Bacteria | 1073 | Open in IMG/M |
3300005559|Ga0066700_10138932 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1634 | Open in IMG/M |
3300005574|Ga0066694_10483196 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 578 | Open in IMG/M |
3300005576|Ga0066708_10476419 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 803 | Open in IMG/M |
3300005617|Ga0068859_100709805 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RIFCSPHIGHO2_02_FULL_73_26 | 1096 | Open in IMG/M |
3300005618|Ga0068864_100478275 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RIFCSPHIGHO2_02_FULL_73_26 | 1195 | Open in IMG/M |
3300005719|Ga0068861_102313808 | All Organisms → cellular organisms → Bacteria | 539 | Open in IMG/M |
3300005764|Ga0066903_102356361 | All Organisms → cellular organisms → Bacteria | 1029 | Open in IMG/M |
3300005764|Ga0066903_104113412 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 779 | Open in IMG/M |
3300005842|Ga0068858_102371340 | All Organisms → cellular organisms → Bacteria | 524 | Open in IMG/M |
3300006046|Ga0066652_100484290 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1146 | Open in IMG/M |
3300006046|Ga0066652_100619419 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1023 | Open in IMG/M |
3300006049|Ga0075417_10011350 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 3319 | Open in IMG/M |
3300006049|Ga0075417_10188398 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 973 | Open in IMG/M |
3300006196|Ga0075422_10487045 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 558 | Open in IMG/M |
3300006794|Ga0066658_10774015 | All Organisms → cellular organisms → Bacteria | 538 | Open in IMG/M |
3300006796|Ga0066665_10802208 | All Organisms → cellular organisms → Bacteria | 742 | Open in IMG/M |
3300006804|Ga0079221_10847595 | Not Available | 662 | Open in IMG/M |
3300006844|Ga0075428_100069262 | All Organisms → cellular organisms → Bacteria | 3858 | Open in IMG/M |
3300006846|Ga0075430_100262316 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1431 | Open in IMG/M |
3300006852|Ga0075433_10247462 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1582 | Open in IMG/M |
3300006852|Ga0075433_10323967 | All Organisms → cellular organisms → Bacteria | 1363 | Open in IMG/M |
3300006852|Ga0075433_10941060 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 753 | Open in IMG/M |
3300006854|Ga0075425_100025205 | All Organisms → cellular organisms → Bacteria | 6554 | Open in IMG/M |
3300006854|Ga0075425_101243004 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 845 | Open in IMG/M |
3300006854|Ga0075425_101403210 | Not Available | 790 | Open in IMG/M |
3300006871|Ga0075434_100755801 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 989 | Open in IMG/M |
3300006871|Ga0075434_100871065 | All Organisms → cellular organisms → Bacteria | 916 | Open in IMG/M |
3300006880|Ga0075429_100026599 | All Organisms → cellular organisms → Bacteria | 5025 | Open in IMG/M |
3300006903|Ga0075426_10148435 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1691 | Open in IMG/M |
3300006903|Ga0075426_10647981 | All Organisms → cellular organisms → Bacteria | 790 | Open in IMG/M |
3300006904|Ga0075424_100019169 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 6979 | Open in IMG/M |
3300006904|Ga0075424_100044677 | All Organisms → cellular organisms → Bacteria | 4619 | Open in IMG/M |
3300006904|Ga0075424_101405577 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 741 | Open in IMG/M |
3300006904|Ga0075424_102481220 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 543 | Open in IMG/M |
3300009012|Ga0066710_100041555 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 5555 | Open in IMG/M |
3300009012|Ga0066710_100587484 | All Organisms → cellular organisms → Bacteria | 1688 | Open in IMG/M |
3300009038|Ga0099829_11046971 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 677 | Open in IMG/M |
3300009053|Ga0105095_10698440 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 566 | Open in IMG/M |
3300009089|Ga0099828_10951617 | All Organisms → cellular organisms → Bacteria | 766 | Open in IMG/M |
3300009090|Ga0099827_10107998 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 2223 | Open in IMG/M |
3300009090|Ga0099827_10710578 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 869 | Open in IMG/M |
3300009094|Ga0111539_10020179 | All Organisms → cellular organisms → Bacteria | 8212 | Open in IMG/M |
3300009137|Ga0066709_100742673 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1416 | Open in IMG/M |
3300009137|Ga0066709_102808298 | All Organisms → cellular organisms → Bacteria | 646 | Open in IMG/M |
3300009147|Ga0114129_10091767 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 4207 | Open in IMG/M |
3300009147|Ga0114129_10802533 | All Organisms → cellular organisms → Bacteria | 1200 | Open in IMG/M |
3300009147|Ga0114129_11528188 | All Organisms → cellular organisms → Bacteria | 819 | Open in IMG/M |
3300009147|Ga0114129_13211392 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 531 | Open in IMG/M |
3300009156|Ga0111538_10074217 | All Organisms → cellular organisms → Bacteria | 4329 | Open in IMG/M |
3300009691|Ga0114944_1158107 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 892 | Open in IMG/M |
3300009777|Ga0105164_10114861 | All Organisms → cellular organisms → Bacteria | 1396 | Open in IMG/M |
3300010043|Ga0126380_10217405 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1294 | Open in IMG/M |
3300010043|Ga0126380_12202297 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 509 | Open in IMG/M |
3300010304|Ga0134088_10393935 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 675 | Open in IMG/M |
3300010329|Ga0134111_10053507 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1470 | Open in IMG/M |
3300010329|Ga0134111_10419260 | All Organisms → cellular organisms → Bacteria | 576 | Open in IMG/M |
3300010359|Ga0126376_10023295 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 4082 | Open in IMG/M |
3300010362|Ga0126377_12481485 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 594 | Open in IMG/M |
3300010399|Ga0134127_10417939 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1331 | Open in IMG/M |
3300010399|Ga0134127_13213059 | Not Available | 534 | Open in IMG/M |
3300010403|Ga0134123_13310093 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 520 | Open in IMG/M |
3300011270|Ga0137391_10728934 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 822 | Open in IMG/M |
3300012040|Ga0137461_1018407 | All Organisms → cellular organisms → Bacteria | 1732 | Open in IMG/M |
3300012189|Ga0137388_10265513 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1566 | Open in IMG/M |
3300012189|Ga0137388_10493827 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15 | 1137 | Open in IMG/M |
3300012285|Ga0137370_10117034 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1516 | Open in IMG/M |
3300012285|Ga0137370_10469855 | All Organisms → cellular organisms → Bacteria | 768 | Open in IMG/M |
3300012350|Ga0137372_10126372 | All Organisms → cellular organisms → Bacteria | 2113 | Open in IMG/M |
3300012363|Ga0137390_11278168 | All Organisms → cellular organisms → Bacteria | 680 | Open in IMG/M |
3300012944|Ga0137410_10384181 | Not Available | 1129 | Open in IMG/M |
3300014166|Ga0134079_10093149 | All Organisms → cellular organisms → Bacteria | 1138 | Open in IMG/M |
3300015252|Ga0180075_1095811 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 528 | Open in IMG/M |
3300015358|Ga0134089_10541992 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 514 | Open in IMG/M |
3300015371|Ga0132258_10048134 | All Organisms → cellular organisms → Bacteria | 9734 | Open in IMG/M |
3300015371|Ga0132258_10063529 | All Organisms → cellular organisms → Bacteria | 8523 | Open in IMG/M |
3300015373|Ga0132257_100261750 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 2068 | Open in IMG/M |
3300015374|Ga0132255_105391493 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 541 | Open in IMG/M |
3300018056|Ga0184623_10295565 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 733 | Open in IMG/M |
3300018422|Ga0190265_11449586 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 801 | Open in IMG/M |
3300018433|Ga0066667_10009699 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 4553 | Open in IMG/M |
3300018482|Ga0066669_10044487 | All Organisms → cellular organisms → Bacteria | 2754 | Open in IMG/M |
3300018482|Ga0066669_10058669 | All Organisms → cellular organisms → Bacteria | 2478 | Open in IMG/M |
3300018482|Ga0066669_10292087 | All Organisms → cellular organisms → Bacteria | 1317 | Open in IMG/M |
3300019244|Ga0180111_1178307 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 571 | Open in IMG/M |
3300019883|Ga0193725_1000246 | All Organisms → cellular organisms → Bacteria | 17072 | Open in IMG/M |
3300020067|Ga0180109_1214592 | All Organisms → cellular organisms → Bacteria | 715 | Open in IMG/M |
3300020074|Ga0194113_10414324 | All Organisms → cellular organisms → Bacteria | 987 | Open in IMG/M |
3300020083|Ga0194111_10013788 | All Organisms → cellular organisms → Bacteria | 8415 | Open in IMG/M |
3300020084|Ga0194110_10131303 | All Organisms → cellular organisms → Bacteria | 2004 | Open in IMG/M |
3300022563|Ga0212128_10042227 | All Organisms → cellular organisms → Bacteria | 2942 | Open in IMG/M |
3300025908|Ga0207643_10725441 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 643 | Open in IMG/M |
3300025910|Ga0207684_10237009 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 1574 | Open in IMG/M |
3300025910|Ga0207684_10768330 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 816 | Open in IMG/M |
3300025910|Ga0207684_10869162 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 759 | Open in IMG/M |
3300025923|Ga0207681_10178041 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1617 | Open in IMG/M |
3300025930|Ga0207701_10235076 | All Organisms → cellular organisms → Bacteria | 1602 | Open in IMG/M |
3300026118|Ga0207675_101562915 | Not Available | 680 | Open in IMG/M |
3300026524|Ga0209690_1027421 | All Organisms → cellular organisms → Bacteria | 2780 | Open in IMG/M |
3300026530|Ga0209807_1118111 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1096 | Open in IMG/M |
3300026536|Ga0209058_1029017 | All Organisms → cellular organisms → Bacteria | 3446 | Open in IMG/M |
3300026548|Ga0209161_10090076 | All Organisms → cellular organisms → Bacteria | 1874 | Open in IMG/M |
3300027731|Ga0209592_1267958 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 589 | Open in IMG/M |
3300027819|Ga0209514_10098622 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1727 | Open in IMG/M |
3300027873|Ga0209814_10098921 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 1237 | Open in IMG/M |
3300027873|Ga0209814_10176358 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 920 | Open in IMG/M |
3300027880|Ga0209481_10559807 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium | 592 | Open in IMG/M |
3300027882|Ga0209590_10222735 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1198 | Open in IMG/M |
3300027907|Ga0207428_10379926 | Not Available | 1036 | Open in IMG/M |
3300027909|Ga0209382_11774800 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 602 | Open in IMG/M |
(restricted) 3300031197|Ga0255310_10102617 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 769 | Open in IMG/M |
3300031720|Ga0307469_12398158 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 515 | Open in IMG/M |
3300031740|Ga0307468_100569837 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 917 | Open in IMG/M |
3300031820|Ga0307473_10761726 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 686 | Open in IMG/M |
3300031911|Ga0307412_11938307 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 544 | Open in IMG/M |
3300031995|Ga0307409_100451125 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1241 | Open in IMG/M |
3300032163|Ga0315281_10215645 | All Organisms → cellular organisms → Bacteria | 2133 | Open in IMG/M |
3300032421|Ga0310812_10038054 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1800 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Habitat | Taxonomy | Distribution |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 21.23% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 13.01% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 9.59% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 8.90% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 5.48% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 3.42% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 3.42% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 3.42% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 2.74% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 2.74% |
Freshwater Lake | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake | 2.05% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 2.05% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 2.05% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 2.05% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 2.05% |
Freshwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment | 1.37% |
Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 1.37% |
Thermal Springs | Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs | 1.37% |
Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 1.37% |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 1.37% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 1.37% |
Sediment | Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment | 0.68% |
Wastewater | Environmental → Aquatic → Freshwater → Drinking Water → Unchlorinated → Wastewater | 0.68% |
Groundwater | Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater | 0.68% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 0.68% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 0.68% |
Sugarcane Root And Bulk Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil | 0.68% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere | 0.68% |
Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 0.68% |
Sandy Soil | Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil | 0.68% |
Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 0.68% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 0.68% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
3300000364 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
3300003319 | Sugarcane bulk soil Sample L2 | Environmental | Open in IMG/M |
3300004156 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1 | Environmental | Open in IMG/M |
3300004157 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2 | Environmental | Open in IMG/M |
3300004267 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio | Environmental | Open in IMG/M |
3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
3300005166 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 | Environmental | Open in IMG/M |
3300005175 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 | Environmental | Open in IMG/M |
3300005180 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 | Environmental | Open in IMG/M |
3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Host-Associated | Open in IMG/M |
3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Environmental | Open in IMG/M |
3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Environmental | Open in IMG/M |
3300005450 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 | Environmental | Open in IMG/M |
3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Environmental | Open in IMG/M |
3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Environmental | Open in IMG/M |
3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Environmental | Open in IMG/M |
3300005540 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 | Environmental | Open in IMG/M |
3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Environmental | Open in IMG/M |
3300005552 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 | Environmental | Open in IMG/M |
3300005553 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 | Environmental | Open in IMG/M |
3300005556 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 | Environmental | Open in IMG/M |
3300005559 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 | Environmental | Open in IMG/M |
3300005574 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 | Environmental | Open in IMG/M |
3300005576 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 | Environmental | Open in IMG/M |
3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Host-Associated | Open in IMG/M |
3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Host-Associated | Open in IMG/M |
3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Host-Associated | Open in IMG/M |
3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Host-Associated | Open in IMG/M |
3300006046 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101 | Environmental | Open in IMG/M |
3300006049 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 | Host-Associated | Open in IMG/M |
3300006196 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 | Host-Associated | Open in IMG/M |
3300006794 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 | Environmental | Open in IMG/M |
3300006796 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 | Environmental | Open in IMG/M |
3300006804 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 | Environmental | Open in IMG/M |
3300006844 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Host-Associated | Open in IMG/M |
3300006846 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Host-Associated | Open in IMG/M |
3300006852 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Host-Associated | Open in IMG/M |
3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
3300006871 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Host-Associated | Open in IMG/M |
3300006880 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Host-Associated | Open in IMG/M |
3300006903 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5 | Host-Associated | Open in IMG/M |
3300006904 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3 | Host-Associated | Open in IMG/M |
3300009012 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159 | Environmental | Open in IMG/M |
3300009038 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG | Environmental | Open in IMG/M |
3300009053 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 | Environmental | Open in IMG/M |
3300009089 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG | Environmental | Open in IMG/M |
3300009090 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG | Environmental | Open in IMG/M |
3300009094 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) | Host-Associated | Open in IMG/M |
3300009137 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158 | Environmental | Open in IMG/M |
3300009147 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) | Host-Associated | Open in IMG/M |
3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
3300009691 | Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2 | Environmental | Open in IMG/M |
3300009777 | Wastewater microbial communities from Netherlands to study Microbial Dark Matter (Phase II) - VDW unchlorinated drinking water | Environmental | Open in IMG/M |
3300010043 | Tropical forest soil microbial communities from Panama - MetaG Plot_26 | Environmental | Open in IMG/M |
3300010304 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015 | Environmental | Open in IMG/M |
3300010329 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015 | Environmental | Open in IMG/M |
3300010359 | Tropical forest soil microbial communities from Panama - MetaG Plot_15 | Environmental | Open in IMG/M |
3300010362 | Tropical forest soil microbial communities from Panama - MetaG Plot_22 | Environmental | Open in IMG/M |
3300010399 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3 | Environmental | Open in IMG/M |
3300010403 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3 | Environmental | Open in IMG/M |
3300011270 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG | Environmental | Open in IMG/M |
3300012040 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2 | Environmental | Open in IMG/M |
3300012189 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG | Environmental | Open in IMG/M |
3300012285 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG | Environmental | Open in IMG/M |
3300012350 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG | Environmental | Open in IMG/M |
3300012363 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG | Environmental | Open in IMG/M |
3300012944 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300014166 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015 | Environmental | Open in IMG/M |
3300015252 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT399_16_10D | Environmental | Open in IMG/M |
3300015358 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG | Environmental | Open in IMG/M |
3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
3300018056 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1 | Environmental | Open in IMG/M |
3300018422 | Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T | Environmental | Open in IMG/M |
3300018433 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116 | Environmental | Open in IMG/M |
3300018482 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118 | Environmental | Open in IMG/M |
3300019244 | Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT293_16_1Ra (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300019883 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2 | Environmental | Open in IMG/M |
3300020067 | Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT47_16_1Ra (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300020074 | Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200m | Environmental | Open in IMG/M |
3300020083 | Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015033 Kigoma Deep Cast 300m | Environmental | Open in IMG/M |
3300020084 | Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015032 Kigoma Deep Cast 1200m | Environmental | Open in IMG/M |
3300022563 | OV2_combined assembly | Environmental | Open in IMG/M |
3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025930 | Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Environmental | Open in IMG/M |
3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026524 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes) | Environmental | Open in IMG/M |
3300026530 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes) | Environmental | Open in IMG/M |
3300026536 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes) | Environmental | Open in IMG/M |
3300026548 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes) | Environmental | Open in IMG/M |
3300027731 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes) | Environmental | Open in IMG/M |
3300027819 | Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m (SPAdes) | Environmental | Open in IMG/M |
3300027873 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes) | Host-Associated | Open in IMG/M |
3300027880 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes) | Host-Associated | Open in IMG/M |
3300027882 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes) | Environmental | Open in IMG/M |
3300027907 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) | Host-Associated | Open in IMG/M |
3300027909 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes) | Host-Associated | Open in IMG/M |
3300031197 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1 | Environmental | Open in IMG/M |
3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
3300031740 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05 | Environmental | Open in IMG/M |
3300031820 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515 | Environmental | Open in IMG/M |
3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Host-Associated | Open in IMG/M |
3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Host-Associated | Open in IMG/M |
3300032163 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0 | Environmental | Open in IMG/M |
3300032421 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
INPhiseqgaiiFebDRAFT_1003174272 | 3300000364 | Soil | MPARHVLPPLKPGDLVIRRHRLLKTTGTVVRFDGKDENGASRAWVKWSHATTLPNPSLETVDELELIVGAPPGDA* |
soilL2_102262701 | 3300003319 | Sugarcane Root And Bulk Soil | MTTFRRVRLMPRLKPGDVVIRRHRLLKTPGTVVRYDGEDENGATRAWIHWDHPTTLPNPSLETLDEVELLQGDSRVIPSRRD* |
Ga0062589_1000051546 | 3300004156 | Soil | MPARRAMPPLKPGDHVIRRHRLLKTQGTVVRFAGRDENGAPRAWIKWSHPTTLPNPSIEALDELELIEATGPEPA* |
Ga0062590_1026443692 | 3300004157 | Soil | HLRPRFKPGDGVVRRHRLLKTRGTVLRLDTDADTGGSLAWVKWDHPTTLPNPSREPLDDLELVDVSSPA* |
Ga0062590_1026734612 | 3300004157 | Soil | MSRRPNIAGKLHVGDVVVRRHRLLKTQGTVLRFDGEDENGGSRAWIKWNHPNTLPNPSLEAV |
Ga0066396_100920642 | 3300004267 | Tropical Forest Soil | TLRRVRVMSRLKPGDVVVRRHRLLKTHGTILRFDGEDENGALRAWIHWDHPTTLPNPSLETLDDVKLVDQDARLSRP* |
Ga0063356_1024872431 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MPRRPLLMSRFKPGDLVIRRHRLLKTQGTILRFDGEDMHGASRAWVRWNHASTLPNPSLETV |
Ga0066674_100367201 | 3300005166 | Soil | MARRVNVILRPKQGDVVIRRHRLLKTQGTVLRFDGEDENGASRVWVRWRHSTTLPNPSLEPVNDLEVVPSASS* |
Ga0066673_101418801 | 3300005175 | Soil | MTSRRTRVINKLHVGDPVIRRHRLLKTRGTVLRFDGEDEHGASRAWVKWTHPDTLPNPSLEAVDDLELLEGSESES* |
Ga0066685_102659713 | 3300005180 | Soil | MFRRADVLPRLKPGDQVIRRHRLLKTQGTVLRFDRVDANRASHVWVRWSHPTTLPNPSLERVDELELVDGSGLAD* |
Ga0066388_10000166210 | 3300005332 | Tropical Forest Soil | MSRLKPGDVVVRRHRLLKTHGTILRFDGEDENGALRAWIHWDHPTTLPNPSLETLDDVKLVDPDARLSRP* |
Ga0066388_1015694712 | 3300005332 | Tropical Forest Soil | MPRRPFVLGRLRPGDLVIRRHRLLKTQGTVLRFAGADHNGAARAWIKWNHPDTLPNPSLEIVDELELVDGQA* |
Ga0070669_1005896542 | 3300005353 | Switchgrass Rhizosphere | VTFRRAVVNVRLKVGDLVIRRHRLIKTQGTILRFDGEDENGASRVWVKWDHPTTLPNPSRESVDALESVDPAPSP* |
Ga0070705_1009953742 | 3300005440 | Corn, Switchgrass And Miscanthus Rhizosphere | SARRPLLREKLSIGDRVIRRHRLLKTQGTVLRFDGEDENGSSRAWVRWSHPNTLPNRSLETVDDLEQLGVDPVV* |
Ga0070705_1018013282 | 3300005440 | Corn, Switchgrass And Miscanthus Rhizosphere | FRRPRVMPKLKPGDVVIRRHRLLKTRGTVLRFDGEDENGASRAWIQWDHPTTLPNPSLETLDDVELVQRDGGPPEP* |
Ga0070708_1000714875 | 3300005445 | Corn, Switchgrass And Miscanthus Rhizosphere | MPKLKPGDVVIRRHRLLKTQGTVVRYDGEDGNGASRAWIRWDHPTTLPNPSLETLDDVELVEGDVRVTRS* |
Ga0070708_1012928913 | 3300005445 | Corn, Switchgrass And Miscanthus Rhizosphere | VTTFRRVRVMPKLKPGDVVVRRHRLLKTHGTVLRFDGEDENGASRAWIQWDHPTTLPNPSLETLDDVELVEEDTPQNRP* |
Ga0070708_1013237933 | 3300005445 | Corn, Switchgrass And Miscanthus Rhizosphere | MTSRRTRVMTKLRVGDLVIRRHRLLKTQGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEAVDDLELREGTNGAG* |
Ga0066682_108580131 | 3300005450 | Soil | VMSKLRVGDLVIRRHRLLKTQGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEAVDDLELLEGTNGAG* |
Ga0070706_1001109534 | 3300005467 | Corn, Switchgrass And Miscanthus Rhizosphere | VTTFRRFRTMPKLRPGDVVVRRHRLLKTRGAVLRFDGEDENGASRAWIRWDHPTTLPNPSLETLDDLELVAGDGHLSLP* |
Ga0070706_1003001363 | 3300005467 | Corn, Switchgrass And Miscanthus Rhizosphere | PGHGVTTARRARLMPKLKPGDVVIRRHRLLKTQGTVVRYDGEDGNGASRAWIRWDHPTTLPNPSLETLDDVELVEGDVRVTRS* |
Ga0070699_1011119302 | 3300005518 | Corn, Switchgrass And Miscanthus Rhizosphere | VTTFRRPRVMPKLKPGDVVIRRHRLLKTRGTVLRFDGEDENGASRAWIQWDHPTTLPNPSLETLDDVELVQRDGGPPEP* |
Ga0070697_1001203091 | 3300005536 | Corn, Switchgrass And Miscanthus Rhizosphere | VTTARRARLMPKLKPGDVVIRRHRLLKTQGTVVRYDGEDGNGASRAWIRWDHPTTLPNPSLETLDDVELVEGDVRVTRS* |
Ga0070697_1012561853 | 3300005536 | Corn, Switchgrass And Miscanthus Rhizosphere | KLKPGDIVVRRHRLLKTHGTVLRFDGEDENGASRAWIQWDHPTTLPNPSLETLDDVELVEEDTPQNRP* |
Ga0066697_103817361 | 3300005540 | Soil | MRRPLVVTRFRPGDLVIRRHRLLKTQGTVLRFDGTDENGTVRAWVKWNHANTLPNPSLEAVDELE |
Ga0070704_1000080434 | 3300005549 | Corn, Switchgrass And Miscanthus Rhizosphere | VTSRRPLVVAKVQAGDIVVRRHRLLKTQGTVLRFDGEDENGASCVWVKWQHPTTLPNPSRETVDDLVRVENGERPV* |
Ga0066701_100102911 | 3300005552 | Soil | MARRVNVILRPKQGDVVIRRHRLLKTQGTVLRFDGEDENGASRVWVRWRHSTTLPNPSLEPVNDLEV |
Ga0066695_105830313 | 3300005553 | Soil | MTSRRTRVMSKLRVGDLVIRRHRLLKTQGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEAVDDLELLEGTNGAG* |
Ga0066707_102887672 | 3300005556 | Soil | MRRALVVKRFRPGDLVIRRHRLLKTQGTVLRFDGTDENGTSRAWVRWNHADTLPNPSLEAVDELELVNGDPTS* |
Ga0066700_101389322 | 3300005559 | Soil | MTSRRTRVMSKLRVGDLVIRRHRLLKTQGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEAVDDLELLERTNGAG* |
Ga0066694_104831962 | 3300005574 | Soil | MTSRRTRVMSKLRVGDLVIRRHRLLKTQGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEAVDDLELLEGTNGA |
Ga0066708_104764192 | 3300005576 | Soil | RGMTSRRTRVINKLHVGDPVIRRHRLLKTRGTVLRFDGEDEHGASRAWVKWTHPDTLPNPSLEAVDDLELLEGSESES* |
Ga0068859_1007098051 | 3300005617 | Switchgrass Rhizosphere | MSRRPNIAGKLHVGDVVVRRHRLLKTQGTVLRFDGEDENGGSRAWIKWKHPNTLPNPSLEAVDDLEIVAE* |
Ga0068864_1004782751 | 3300005618 | Switchgrass Rhizosphere | MSRRPNIAGKLHVGDVVVRRHRLLKTQGTVLRFDGEDENGGSRAWIKWNHPNTLPNPSLEAVDDLEIVAE* |
Ga0068861_1023138082 | 3300005719 | Switchgrass Rhizosphere | LASAVTLMSRRPNIAGKLHVGDVVVRRHRLLKTQGTVLRFDGEDENGGSRAWIKWNHPNTLPNPSLEAVDDLEIVAE* |
Ga0066903_1023563612 | 3300005764 | Tropical Forest Soil | TDVPARRVMRRLKPGDLVIRRHRLLKTRGTVVRFDGEDENGASRAWIKWSHPTTLPNPSLETVDELALVEESDGSVEA* |
Ga0066903_1041134122 | 3300005764 | Tropical Forest Soil | MSRLKPGDVVVRRHRLLKTHGTILRFDGEDENGALRAWIHWDHPTTLSNPSLETLDDVKLVDQDARLSRP* |
Ga0068858_1023713401 | 3300005842 | Switchgrass Rhizosphere | APRGDERRRPLAPLEALAIDLASAVTLMSRRPNIAGKLHVGDVVVRRHRLLKTQGTVLRFDGEDENGGSRAWIKWNHPNTLPNPSLEAVDDLEIVAE* |
Ga0066652_1004842902 | 3300006046 | Soil | MTSRRTRVINKLHVGDPVIRRHRLLKTRGTVLRFDGEDEHGASRAWVKWTHPDTLPNPRLEAVDDLELLEGSESES* |
Ga0066652_1006194191 | 3300006046 | Soil | AGPRVGQRMTSRRTRVMTKLRVGDLVIRRHRLLKTQGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEAVDDLELLEGTNGAG* |
Ga0075417_100113504 | 3300006049 | Populus Rhizosphere | MRRLKPGDRVIRRHRLLKTQGTVVRFDGEDENGASRAWIKWSHPTTLPNPSLETVDELELMVEGDGTLEA* |
Ga0075417_101883982 | 3300006049 | Populus Rhizosphere | MPARHVMLPLKPGDLVVRRHRLLKTRGTLVRFDGKDENGASRAWVKWSHATTLPNPSLETVDELELIVGAGPREA* |
Ga0075422_104870452 | 3300006196 | Populus Rhizosphere | LMPARRAMPPLKPGDHVIRRHRLLKTQGTVVRFAGRDENGAPRAWIKWSHPTTLPNPSIEALDELELIEATGPEPA* |
Ga0066658_107740152 | 3300006794 | Soil | VTMFRRVRMIPKLKPGDVVVRRHRLLKTHGIVLRFDGEDSNGASRAWIKWDHPTTLPNPSLETLDDVELVEADTRLKTL* |
Ga0066665_108022081 | 3300006796 | Soil | MFRRADVLPRLKPGDQVIRRHRLLKTQGTVLRFDRVDANRASHVWVRWSHPTTLPNPSLERVDELKLVDGSGLAD* |
Ga0079221_108475952 | 3300006804 | Agricultural Soil | MPARHVMLPLKPGDLVVRRHRLLKTRGTLVRFDGKDENGASRAWVKWSHATTLPNPSLETVDELELIVGAGPGEA* |
Ga0075428_1000692628 | 3300006844 | Populus Rhizosphere | MPTRRVMSPLKPGDLVIRSHRLLKTRGTVVRLDGKDENGASRAWIRWSHPTTLPNPSLEAVIELELVERTSLGEA* |
Ga0075430_1002623161 | 3300006846 | Populus Rhizosphere | MPTRRVMSPLKPGDLVIRSHRLLKTRGTVVRLDGKDENGASRAWIRWSHPTTLPNPSLEAVIELELV |
Ga0075433_102474623 | 3300006852 | Populus Rhizosphere | MAARRAMPPIKPGDQVVRRHRLLKTTGTVVRFAGRDENGAARAWIKWTHPTTLPNPSLETVDELELAESDGSETATT* |
Ga0075433_103239672 | 3300006852 | Populus Rhizosphere | MTSRRTRVMTKLRVGDLVIRRHRLLKTQGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEAVDDLELLEGTNGTG* |
Ga0075433_109410601 | 3300006852 | Populus Rhizosphere | VTTFRRVRVMPKLKPGDVVVRRHRLLKTHGTVLRFDGEDENGASRAWIQWDHPTTLPNPSLETLD |
Ga0075425_1000252057 | 3300006854 | Populus Rhizosphere | MPKLKPGDVVIRRHRLLKTRGTVVRYDGEDGNGASRAWIHWDHPTTLPNPSLETLDDVELVESDVRVTRS* |
Ga0075425_1012430043 | 3300006854 | Populus Rhizosphere | MPARHVMLPLKPGDLVVRRHRLLKTRGTLVRFDGKDENGASRAWVKWSHATTLPNPSLETVDELELIV |
Ga0075425_1014032102 | 3300006854 | Populus Rhizosphere | MTSRRTRVMTKLRVGDLVIRRHRLLKTQGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEAVDDLELLEGTNGAG* |
Ga0075434_1007558013 | 3300006871 | Populus Rhizosphere | VTTVRRVRLMPKLKPGDVVIRRHRLLKTRGTVVRYDGEDGNGASRAWIHWDHPTTLPNPSLETLDDVELVESDVRVTRS* |
Ga0075434_1008710652 | 3300006871 | Populus Rhizosphere | MTNRRTQVIARLRIGDTVVRRHRLLKTQGTVLRFDGEDDNGASRAWIRWSHPNTLPNPSLEPVDDLELVQAASPGA* |
Ga0075429_1000265994 | 3300006880 | Populus Rhizosphere | MPTRRVMSPLKPGDLVIRSHRLLKTRGTVVRLDGKDENGASRAWIRWSHPTTLPNPSLEAVIELELVERTSLAEA* |
Ga0075426_101484353 | 3300006903 | Populus Rhizosphere | MSRRALVMSRVRRGDLVIRRHRLLKTQGIVLRFDGEDENGASRAWIKWSHPTTLPNPSLEPVDDLEILEAGGWSETG* |
Ga0075426_106479813 | 3300006903 | Populus Rhizosphere | MPKLKPGDVVIRRHRLLKTRGIVVRYDGEDGNGASRAWIHWDHPTTLPNPSLETLDDVELVESD |
Ga0075424_1000191691 | 3300006904 | Populus Rhizosphere | MAARRAMPPIKPGDQVVRRHRLLKTTGTVVRFAGRDENGAARAWIKWTHPTTLPNPSLETVDEL |
Ga0075424_1000446779 | 3300006904 | Populus Rhizosphere | VTTVRRVRLMPKLKPGDVVIRRHRLLKTRGTVVRYDGEDDNGASRAWIRWDHPTTLPNPSLETLDDVELVEGDGP* |
Ga0075424_1014055772 | 3300006904 | Populus Rhizosphere | MTNRRTQVIARLRIGDTVVRRHRLLKTQGTVLRFDGEDDNGASRAWIRWSHPNTLPNPSLEPVDDLELVQAAGPGA* |
Ga0075424_1024812202 | 3300006904 | Populus Rhizosphere | GGAQEAPPRARPCPRPGHGVTTFRRVRVMPKLKPGDVVVRRHRLLKTHGTVLRFDGEDENGASRAWIQWDHPTTLPNPSLETLDDVELVEEDTPQNRP* |
Ga0066710_1000415552 | 3300009012 | Grasslands Soil | MFRRADVLPRLKPGDQVIRRHRLLKTQGTVLRFDRVDANRASHVWVRWSHPTTLPNPSLERVDELELVDGGGLAD |
Ga0066710_1005874841 | 3300009012 | Grasslands Soil | MTSRRTRVMSKLRVGDLVIRRHRLLKTLGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEAVDDLELLEGTNGAG |
Ga0099829_110469711 | 3300009038 | Vadose Zone Soil | MTSRRTRVMTKLRVGDLVIRRHRLLKTQGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEAVDDLELLEGTNGVD* |
Ga0105095_106984402 | 3300009053 | Freshwater Sediment | MSRRPNVTTKLQVGDVVVRRHRLLKTQGTVLRFDGEDDNGGSRAWIRWNHKDTLPNPSLEAVDDLEVVGASGAV* |
Ga0099828_109516173 | 3300009089 | Vadose Zone Soil | MIPKLKPGDIVVRRHRLLKTHGIVLRFDGEDSNGASRAWIKWDHPTMLPNPSLETLDDVELVEA |
Ga0099827_101079982 | 3300009090 | Vadose Zone Soil | MMPKLKPGDVVVRRHRLLKTHGTVLRFDGEDENGASRAWIQWDHPTTLPNPSLETLDDVELVEGDIPLDRP* |
Ga0099827_107105784 | 3300009090 | Vadose Zone Soil | VTTFRRVRMMPKLKPGDIVVRRHRLLKTHGTVLRFDGEDENGASRAWIQWDHPTTLPNPSLETLDDVELVEEDTPQNRP* |
Ga0111539_1002017910 | 3300009094 | Populus Rhizosphere | MSARRAMPPIKPGDQVVRRHRLLKTTGTVVRFAGRDENGATRAWIKWTHPTTLPNPSLETVDELELAESDGSETTTT* |
Ga0066709_1007426732 | 3300009137 | Grasslands Soil | MTKLRVGDLVIRRHRLLKTQGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEAVDDLELLEGTNGAG* |
Ga0066709_1028082981 | 3300009137 | Grasslands Soil | MRRPLVVTRFRPGDLVIRRHRLLKTQGTVLRFDGTDENGTVRAWVKWNHANTLPNPSLEAVDELELVGGDSAR* |
Ga0114129_100917672 | 3300009147 | Populus Rhizosphere | MLPLKPGDLVVRRHRLLKTRGTLVRFDGKDENGASRAWVKWSHATTLPNPSLETVDELELIVGAGPGEA* |
Ga0114129_108025332 | 3300009147 | Populus Rhizosphere | MSERRLRVNVKLRVGDPVVRRHRLLKTPGVVLRFDGEDENGASRVWIKWSHPNTLPNPSLETVDDLERLD* |
Ga0114129_115281881 | 3300009147 | Populus Rhizosphere | MTSRRTRVMTKLRVGDLVIRRHRLLKTQGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEPVDDLELLDGERAE |
Ga0114129_132113921 | 3300009147 | Populus Rhizosphere | MSSRRTQVIARLRVGDIVIRRHRLLKTQGTVLRFDGEDDNGASRAWIRWSHPSTLPNPSLEPVDDLELIQAANGGA* |
Ga0111538_100742178 | 3300009156 | Populus Rhizosphere | MAARRAMPPIKPGDQVVRRHRLLKTTGTVVRFAGRDENGAARAWIKWTHPTTLPNPSLETVDELELAESDGSETTTT* |
Ga0114944_11581072 | 3300009691 | Thermal Springs | MSTRRPLVVGRLRVGDVVVRRHRLLKTQGTVLHFDGEDENGASRAWIRWSHPNTLPNPSLEVVDDLERVGPA* |
Ga0105164_101148612 | 3300009777 | Wastewater | MSRLHVGDLIVRRHRLLKTQGTVLRFDGEDENGASRVWVKWSHPDTLPNPSLEAVDDLELVDGTNGANGANGAA* |
Ga0126380_102174051 | 3300010043 | Tropical Forest Soil | MRRLKPGDRVIRRRRLLKTRGTVVRFDAKDGNGASRAWIKWSHPTTLPNPSLETVDELELMEEGGREVESDVDGIAVEGPAT* |
Ga0126380_122022971 | 3300010043 | Tropical Forest Soil | MRRLKPGDLVIRRHRLLKTRGTVVRFDGEDENGASRAWIKWSHPTTLPNPSLETVDELALVEESDGSVEA* |
Ga0134088_103939353 | 3300010304 | Grasslands Soil | MFRRADVLPRLKPGDQVIRRHRLLKTQGTVLRFDGVDANRASRVWVRWSHPTTLPNPSLERVDELELVDGSGLAD* |
Ga0134111_100535074 | 3300010329 | Grasslands Soil | MARRVNVILRPKQGDVVIRRHRILKTQGTVLRFDGEDENGASRVWVRWRHSTTLPNPSLEPVNDLEVVRAAS |
Ga0134111_104192601 | 3300010329 | Grasslands Soil | RMTSRRTRVMSKLRVGDLVIRRHRLLKTQGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEAVDDLELLEGTNGAG* |
Ga0126376_100232954 | 3300010359 | Tropical Forest Soil | MSRLKPGDVVVRRHRLLKTHGTILRFDGEDENGALRAWIHWDHPTTLPNPSLETLDDVKLVDQDARLSRP* |
Ga0126377_124814853 | 3300010362 | Tropical Forest Soil | VTTFRRVRLMPRLKPGDVVIRSHRLLKTRGTVVRYDGEDENGGTRAWIRWDHPTTLPNPSLETLD |
Ga0134127_104179394 | 3300010399 | Terrestrial Soil | MPKLKPGDVVIRRHRLLKTRGTVLRFDGEDENGASRAWIQWDHPTTLPNPSLETLDDVELVQRDGGPPEP* |
Ga0134127_132130592 | 3300010399 | Terrestrial Soil | APLEALAIDLASAVTLMSRRPNIAGKLHVGDVVVRRHRLLKTQGTVLRFDGEDENGGSRAWIKWNHPNTLPNPSLEAVDDLEIVAE* |
Ga0134123_133100932 | 3300010403 | Terrestrial Soil | MTRRPNIAGKLHVGDVVVRRHRLLKTQGTVLRFDGEDENGGSRAWIKWNHPNTLPNPSLEAVDDLEIVAE* |
Ga0137391_107289342 | 3300011270 | Vadose Zone Soil | MIPKLKPGDIVVRRHRLLKTHGIVLRFDGEDSNGASRAWIKWDHPTTLPNPSLETLDDVELVEADTRLKTL* |
Ga0137461_10184072 | 3300012040 | Soil | MSRLHVGDLIVRRHRLLKTQGTVLRFDGEDENGASRVWVKWSHPDTLPNPSLEAVDDLELVEGTNGAHGVNGAA* |
Ga0137388_102655134 | 3300012189 | Vadose Zone Soil | MMPKLKPGDVVVRRHRLLKTHGTVLRFDGEDENGASRAWIQWDHPTTLPNPSLETLDDVELVEEDTPQNRP* |
Ga0137388_104938272 | 3300012189 | Vadose Zone Soil | MTFRRPNVISKLHPGDVVVRRHRLLKTQGTVVRFDGEDENGGSRAWIKWSHPNTLPNPSLEAVDDLELVTGVDSPR* |
Ga0137370_101170344 | 3300012285 | Vadose Zone Soil | MFRLKAGDVVIRRHRLLKTQGTILRFDGEDENGASRAWVKWRHSTTLPNPSLEPVDDLEMLTPDGEMSVP* |
Ga0137370_104698553 | 3300012285 | Vadose Zone Soil | MTSRRTRVINKLHVGDPVIRRHRLLKTRGTVLRFDGEDEHGASRAWVKWTHPDTLPNPSL |
Ga0137372_101263722 | 3300012350 | Vadose Zone Soil | MTFRRPNVISKLRPGDLVVRRHRLLKTQGTVLRFDGEDENGGSRAWIKWSHPNTLPNPSLEAVDDLELVTGAESGR* |
Ga0137390_112781683 | 3300012363 | Vadose Zone Soil | MMPKLKPGDVVVRRHRLLKTHGTVLRFDGEDENGASRAWIQWDHPTTLPNPSLETLDDVELVEGDIPLDR |
Ga0137410_103841813 | 3300012944 | Vadose Zone Soil | MSKLRVGDLVIRRHRLLKTQGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEAVDDLELLEGTNGAG* |
Ga0134079_100931493 | 3300014166 | Grasslands Soil | INKLHVGDPVIRRHRLLKTRGTVLRFDGEDEHGASRAWVKWTHPDTLPNPSLEAVDDLELLEGSESES* |
Ga0180075_10958112 | 3300015252 | Soil | MSFRRPHVIGKLHVGDLVVRRHRLLKTQGTVVRFDGEDENGGSRAWIKWSHPNTLPNPSLEAVDDLERVGGDAG* |
Ga0134089_105419922 | 3300015358 | Grasslands Soil | MARRVNVILRPKQGDVVIRRHRLLKTQGTVLRFDGEDENGASRVWVRWRHSTTLPNPSLEPVNDLEVIPSASS* |
Ga0132258_100481344 | 3300015371 | Arabidopsis Rhizosphere | MLPLKPGDLVVRRHRLLKTRGTLVRFDGKDENGASRAWVKWSHATTLPNPSLETVDELELIVDAGPGEA* |
Ga0132258_100635299 | 3300015371 | Arabidopsis Rhizosphere | MMPPLKPGDLVIRRHRLLKTRGTLIRFDGKDENGASRAWVKWNHATTLPNPSLEAVHDLELIVGVGFGEA* |
Ga0132257_1002617501 | 3300015373 | Arabidopsis Rhizosphere | RAPGTGTDMPARHVMLPLKPGDLVVRRHRLLKTRGTLVRFDGKDENGASRAWVKWSHATTLPNPSLETVDELELIVDAGPGEA* |
Ga0132255_1053914932 | 3300015374 | Arabidopsis Rhizosphere | MGTGIDLPARHMMPPLKPGDLVIRRHRLLKTRGTLIRFDGKDENGASRAWVKWNHATTLPNPSLEAVHDLELIVGVGFGEA* |
Ga0184623_102955651 | 3300018056 | Groundwater Sediment | MTSRRTRVVSKLRVGDPVIRRHRLLKTQGVVLRFDGEDENGASRAWVKWSHPNTLPNPSLEAVDDLELLEGTNGAA |
Ga0190265_114495862 | 3300018422 | Soil | MSRRPFVVSRVQPGHRVVRRHRLLKTQGTVLRFDGEDENGASRVWVKWNHPTTLPNPSLEAVDDLELISE |
Ga0066667_100096996 | 3300018433 | Grasslands Soil | MARRVNVILRPKQGDVVIRRHRLLKTQGTVLRFDGEDENGASRVWVRWRHSTTLPNPSLEPVNDLEVVPSASS |
Ga0066669_100444871 | 3300018482 | Grasslands Soil | MARRVNVILRPKQGDVVIRRHRLLKTQGTVLRFDGEDENGASRVWVRWRHSTTLPNPSLEPVNDL |
Ga0066669_100586693 | 3300018482 | Grasslands Soil | MTSRRTRVINKLHVGDPVIRRHRLLKTRGTVLRFDGEDEHGASRAWVKWTHPDTLPNPSLEAVDDLELLEGSESES |
Ga0066669_102920874 | 3300018482 | Grasslands Soil | MTSRRTRVMSKLRVGDLVIRRHRLLKTQGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEAVDDLELLEGTNGAG |
Ga0180111_11783072 | 3300019244 | Groundwater Sediment | MSFRRPHVIGKLHVGDLVVRRHRLLKTQGTVVPFDGEDENGGSRAWIRWSHPNTLPNPSLEAVDDLERVEAEAG |
Ga0193725_100024614 | 3300019883 | Soil | VTTFRRVRVMPKLKPGDIVVRRHRLLKTQGTVLRFDGEDENGASCAWVRWNHPTTLPNPSRETLADLELVEDNAFA |
Ga0180109_12145922 | 3300020067 | Groundwater Sediment | MPRRPLVASKLRIGDLVVRRHRLLKTQGTVVRFDGEDENGASRAWIKWQHPNTLPNPSLEAVDDLELVPGLTRGV |
Ga0194113_104143242 | 3300020074 | Freshwater Lake | LTERRVRVMSRLQVGDLVVRRHRLLKTQGVLLRFDGEDENGASCAWIKWNHPNTLPNPSREAVDDLERATPP |
Ga0194111_100137881 | 3300020083 | Freshwater Lake | LTERRVRVMSRLQVGDLVVRRHRLLKTQGVLLRFDGEDENGASCAWIKWNHPNTLPNPSREAVD |
Ga0194110_101313034 | 3300020084 | Freshwater Lake | MSRLQVGDLVVRRHRLLKTQGVLLRFDGEDENGASCAWIKWNHPNTLPNPSREAVDDLERATPP |
Ga0212128_100422273 | 3300022563 | Thermal Springs | MSTRRPLVVGRLRVGDIVVRRHRLLKTQGTVLHFDGEDENGASRAWIRWSHPNTLPNPSLEVVDDLERVGPA |
Ga0207643_107254411 | 3300025908 | Miscanthus Rhizosphere | MSRRPNIAGKLHVGDVVVRRHRLLKTQGTVLRFDGEDENGGSRAWIKWNHPNTLPNPSLEAVDDLEIVAE |
Ga0207684_102370093 | 3300025910 | Corn, Switchgrass And Miscanthus Rhizosphere | VTTFRRFRTMPKLRPGDVVVRRHRLLKTRGAVLRFDGEDENGASRAWIRWDHPTTLPNPSLETLDDLELVAGDGHLSLP |
Ga0207684_107683301 | 3300025910 | Corn, Switchgrass And Miscanthus Rhizosphere | VTTFRRVRVMPKLKPGDVVVRRHRLLKTHGTVLRFDGEDENGASRAWIQWDHPTTLPNPSLETLDDVELVEEDTPQNRP |
Ga0207684_108691622 | 3300025910 | Corn, Switchgrass And Miscanthus Rhizosphere | PGHGVTTARRARLMPKLKPGDVVIRRHRLLKTQGTVVRYDGEDGNGASRAWIRWDHPTTLPNPSLETLDDVELVEGDVRVTRS |
Ga0207681_101780415 | 3300025923 | Switchgrass Rhizosphere | MPARRAMPPLKPGDHVIRRHRLLKTQGTVVRFAGRDENGAPRAWIKWSHPTTLPNPSIEALDELELIEATGPEPA |
Ga0207701_102350763 | 3300025930 | Corn, Switchgrass And Miscanthus Rhizosphere | VTFRRAVVNVRLKVGDLVIRRHRLIKTQGTILRFDGEDENGASRVWVKWDHPTTLPNPSRESVDALESVDPAPSP |
Ga0207675_1015629152 | 3300026118 | Switchgrass Rhizosphere | IDLAFAVTLMSRRPNIAGKLHVGDVVVRRHRLLKTQGTVLRFDGEDENGGSRAWIKWNHPNTLPNPSLEAVDDLEIVAE |
Ga0209690_10274211 | 3300026524 | Soil | MARRVNVILRPKQGDVVIRRHRLLKTQGTVLRFDGEDENGASRVWVRWRHSTTLPNPSLEPVNDLEVIPSASS |
Ga0209807_11181113 | 3300026530 | Soil | MTSRRTRVMTKLRVGDLVIRRHRLLKTQGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEAVDDLELLEGTNGAG |
Ga0209058_10290173 | 3300026536 | Soil | MMARRVNVILRPKQGDVVIRRHRLLKTQGTVLRFDGEDENGASRVWVRWRHSTTLPNPSLEPVNDLEVVPSASS |
Ga0209161_100900764 | 3300026548 | Soil | MTSRRTRVMSKLRVGDLVIRRHRLLKTQGTVLRFDGEDENGASRAWIKWSHPNTLPNPSLEAVDDERGGPARPRVTRTHA |
Ga0209592_12679582 | 3300027731 | Freshwater Sediment | MSRRPNVTTKLQVGDVVVRRHRLLKTQGTVLRFDGEDDNGGSRAWIRWNHKDTLPNPSLEAVDDLEVVGASGAV |
Ga0209514_100986222 | 3300027819 | Groundwater | MPRRPLVINRLGVGDLVVRRHRLLKTQGTVVRFDGDTGTCSARVWIKWSHPTTLPNPSLEYADDLERVGEADSARVG |
Ga0209814_100989212 | 3300027873 | Populus Rhizosphere | MRRLKPGDRVIRRHRLLKTQGTVVRFDGEDENGASRAWIKWSHPTTLPNPSLETVDELELMVEGDGTLEA |
Ga0209814_101763581 | 3300027873 | Populus Rhizosphere | MPTRRVMSPLKPGDLVIRSHRLLKTRGTVVRLDGKDENGASRAWIRWSHPTTLPNPSLEAVIELELVERTSLGEA |
Ga0209481_105598073 | 3300027880 | Populus Rhizosphere | MAARRAMPPIKPGDQVVRRHRLLKTTGTVVRFAGRDENGAARAWIKWTHPTTLPNPSLETVDELELA |
Ga0209590_102227353 | 3300027882 | Vadose Zone Soil | VTTFRRVRMMPKLKPGDVVVRRHRLLKTHGTVLRFDGEDENGASRAWIQWDHPTTLPNPSLETLDDVELVEGDIPLDRP |
Ga0207428_103799261 | 3300027907 | Populus Rhizosphere | MPARHVMLPLKPGDLVVRRHRLLKTRGTLVRFDGKDENGASRAWVKWSHATTLPNPSLETVDE |
Ga0209382_117748001 | 3300027909 | Populus Rhizosphere | VTFRRARVIPRLKPGDRVIRRHRLLKTQGTVLRFDGEDENGASRAWVRWLHPSTLPNPSLEPVDDLELVEEIA |
(restricted) Ga0255310_101026173 | 3300031197 | Sandy Soil | VKTSRRVRVNPRLKPGDVVVRRHRLLKTRGTVLRFDGEDDDGASRAWIRWDHPTTLPNPSLETIDDVELVESVEGLARPES |
Ga0307469_123981582 | 3300031720 | Hardwood Forest Soil | VTTFRRVRVMPKLKPGDVVVRRHRLLKTHGTVLRFDGEDENGASRAWIQWDHPTTLPNPSLETLDDVELVEEDTPQIRP |
Ga0307468_1005698373 | 3300031740 | Hardwood Forest Soil | VTTFRRVRVMPKLKPGDIVVRRHRLLKTHGTVLRFDGEDENGASCVWVRWDHPTTLPNPSREPLADLELVEDTALA |
Ga0307473_107617261 | 3300031820 | Hardwood Forest Soil | VTTARRARLMPKLKPGDVVIRRHRLLKTQGTVVRYDGEDGNGASRAWIRWDHPTTLPNPSLETLDDVELVEGDVRVTRS |
Ga0307412_119383072 | 3300031911 | Rhizosphere | MPRRTPQISRFKPGDLVVRRHRLLRTQGTLLRFDGEDMNGASRAWVKWNHATTLPNPSLEAVDDLELVERTSAN |
Ga0307409_1004511253 | 3300031995 | Rhizosphere | ISRFKPGDLVVRRHRLLRTQGTLLRFDGEDMNGASRAWVKWNHATTLPNPSLEAVDDLELVERTSAN |
Ga0315281_102156455 | 3300032163 | Sediment | MPRRPRVMSRLHVGDLIVRRHRLLKTQGTVLRFDGEDENGASRVWVKWSHPDTLPNPSLEAVDDLELVESTNGANGVNGAA |
Ga0310812_100380541 | 3300032421 | Soil | MPARYMMPPLKPGDLVIRRHRLLKTRGTVIRFDGKDENGASRAWVKWNHATTLPNPSLEAVHDLELIVGAGFGEA |
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